Csa3G865440 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G865440
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionMADS box transcription factor; contains IPR002100 (Transcription factor, MADS-box), IPR002487 (Transcription factor, K-box)
LocationChr3 : 36197413 .. 36201586 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCGTGGGAAGATCCAGATCAAGAGAATAGAAAACCCTACAAACAGGCAAGTGACTTACTCCAAGAGACGCAACGGGCTGTTCAAAAAAGCCAACGAATTGACGGTTCTCTGCGATGCTAAAGTCTCCATTATCATGTTCTCCAGCACTGGAAAACTTCACGAGTGTTCAAAAAAGCCAACGAATTGACGGTTCTCTGCGATGCTAAAGTCTCCATTATCATGTTCTCCAGCACTGAAAAACTTCACGAGTATACCACCCCTGCCACTTCGTAAGTATTAAATATATATATATAATAAATCAAATCAACCACACCCTATCCCATTCTTCTTCTTCTTCTCCTTCTCCTTCTTAATGATATGATGATCTGTTTGATTTGATTTTTTAGGACTAAGGAGCTTTTCGATCAGTACCAGAAGACTTTAGGCGTTGATTTATGGATCACTCACTATGAGGTCAGCCTCACCCCGGCCCTCTCTCTTACCTTTCTCTCTATTTTTATAACTACTCTAATTTATATATTGTATTTCTATGGTGCGGTCCAGAGAATGCAAGACAATCTCAAGAAGCTCAAAGATATCAACCGAAATCTCCGAAGGCAGATTAGGTATTAATTATATTCTCATCATCATCATCTCTATTTTTTTTAAATATATAATTTAATTAATTTTTTAAATATATTATTCAGGCAGAGGATGGGGGAATGTATGAATGATCTGAGTTTTGAAGAACTCCGATGTCTTGAGCAAGATATGGATAATGCTGTCAGGATCATCCGTGAACGCAAGGTCTATTCTCTCTCTCTTATCCCTTTTAAAATTACTTCATTTCTATTTTACATCTATGTTTATAACTATCATAAATCATCTTCATCTATTTGGTTTCTTGACTTAATTACTTCTATAAACGATATCAGTAGCTACTTTAATTAAGTCTTGGGAGTTGAGTTTAGATTTTTTAGATTTTTTTGTATTATTATTAATGGTTTATGTGCTCATCTTGATCGATTAAAATCACTCCCTTTTTTCATTTGCCATTTTTCTTCGATGTATATGACTTTTTGAGCTATCCTCTAGCTATCTCATGTATTTTCTCTTGAAGATAATGCTTCACTTGTGGTATTGGGGGTGTTTAGATTTGCTTGTGATATATCAACCTAGTTGAAGTGAGATATCTCGGTCGCGCCATCATTTCCTCTATCTCTAGTATCTTGTTTAAAAAACAGAAGTGTATAGTGGAGGAGGGAGAAGAGCGTGGCTTCCTAAGAGCTTTGATTGTGGTAGACCAAATTCAACCTTACCAAAACGAAAAAATTTACCTTATCATAACTTTTAAAGTAGTTCTGAGAGTCAAAAACTATTCCGGGGATATTTGAGAGGAACTGTAATGTTGTTTGAATTACTTTGTCCTTTTCAAAATCACATTGAAACATATTTCTAATAATTTCTAATATATTTTGATGATATAAAAGTTATATTATTTAAAAGTGTACAATTGAGTATTAAATTAGTTTTGAGTGATTATACAAAAGTGATTTGAACACTCTTAAAATTGGTTCTCAAATATGCATCTTTTTATATTTAAGGATATGTCAATCAGAAGAGAAATATTTTTACTTTTTCAAATAATGTTTTTTTAGTTTGAGATTCTAGTCTGGGAAAGTATTGTTGCTTTTCAAATAAGCTCTAATTCAAACAACTATTAAACCGTAAATCAGGGTTATACAATATTAAGTACATGGGTTATATCTGAAGAATACACAATCATTGTGAAGTTCTAAACCCACGATCCTAATTTAGAAATCAATTGGTTGCGCGGATGTTTTTATAACAAGATACTAGAAGAAAGAGATCAGTATAGATGCATCAATGGATCAAGACTTCTCAACTATGGACGGTTGAAAATGATTAAATTGGTGTATAAAAAACTTACTTTGTAATTATGATGCATCTATCATTTCTCTAGGTTAGAAAATTTTCCACTAGATTCCTCTGCCTACATTTTTATTATTCAACGAAGGGATTTCGTTGTTTCCTTTTAAAAGAATGATTTATAAGCCCTTCATAATCTCACTTTTTAGCATGTCATAAATTATGTATGTCTTATCGACTTTGATTCTATATTAAATTTGGTAGACATTATTTTAGAGCTAGTTTGGATTCACAATACAAAATAATGTTTTTCAAAAAGTTATTTTATTATTATTTTTAATATAGATTGTTTAAAGTAATTCAAAATGTTCCACAAGCTGGTTTTCAAGCACTAAAATTTCTCATGTACTTATTTTAAAAACTAAATCAATGGTTAAAAAATATATAGTAGTGATCTTGCATATAAGTGCAATAACTGTAAATATAGATGCTTCTGTATGTGTTACATTAACCGATTCAAATTGAAACTTTGTTCAACAGTACCGGGTGATCTCAAACCAGATCGAAACACACAAGAAGAAGGTAATTCAAAATCATTATCATTTATATATATTGAAACGTTGTTTGGGAGGTCTCTTTAAATATCTTACAAAAATGTGTAGTTAGACTACTTTAACTGCTATCTAAAATGTATTATAAAAAGAATTACCTTTGTGATTGGACTAAAAAATGATTACCATCTAGCCAGCCTGCCCTTAACATGGTTCAAATACAAATATTCTCCTACATTCAGTTTGAAATGAATTTTGCACGGAGTCAAAAGGATTGTATTCAAAGTGTATTTGATTATCGCAACTAGTTAGCACCCTCAAATTCACACGAATAATATGCACTCTTTCTACACATTATATAGTTTTACGTCTTTATATATAAAAAAAAGCGTTAGTTATGTAGCAAACTGTGAGTAGATGATTAGATAAGGTATATAAAGATAAATGAACCACATGTATACATCATATATGTAAGTATTACTCATTTATTACTGGAACAATGTTTTCTTTAAAGAATGTGTTTATAGAAGAGTATTGCTTAGCTAGTTGGTGTCCATTTAATAGTTAAAAAGCTAAAAAGCCTACATAGAACAATATGATTGGACTGCAATATAGCTTGCATGTAGCAGTATTACCGTTCTATATTTATTTTTTCAAATATATTTCTTTTAGTAAGTTGAATTCTTATAAAAACAGTATTATCAATTAATCAAAATTATGTTTGTTTTTTTTTTCCTTACAAAAAGTAAGAACAAACCATTTAACTTTTAAGGTTGATAATACAAAAACTGCGTATAAGTTAACTTATATACTGGTTCTGACAGAATAAGTATCTGTTTAGAATAAATTTTCTAGTTTACATGATTAAAAAAAATTATTAAAAACTAAAGAACACTTTGTAAGCACTTGATGGTTTTACATCTTTTGTATATATATATAAAGGTTTGACACATATGACAAATGATAGTTGGATAATTGGGTGGACTGCAGTTTCAAAGTAATGTTATAGTAACATGAAATTGATTTGATGTGGTGAAAATGCAGTTAAAGAGCGTAGGAGAAATACACAAGAGTCTTCTACAAGAGTTTGTAAGTGTGATTAAGTTTATTGGTAGATATACATTATGGTGTGTTACTATGTAATGAAATGACATATATGCACATATTATAAATATTAATTTGTGAGAGTACAGGACATTGCAACAGAAGAAGATCCACATTATGGGCTGGTAGACAATGGAGGAGTAGGTGTAGGAATTGGAGGAGGAGATTATGAGTCAATTATGGGGTTCTCAGGTGCTGCCCATCCTCGCATTTTTGCATTGCGTCTCCAGCCCAACCACACCCACAACAACCATCTTAATAATATTCACCTTCATCACCCTCCTCCTTCAGATCTCACTACCTATCCACTCCTTGAGTAGTCTATATATTATATCATTAATTCCAACTCCTCTTTCAAACCCTAACTCATGATGTCTCACAACTATATATGTTTTTAATTTTGTTTAATTTTTCCCTTTTCTTGGTTCATTCAGTTGTTAAATTGAATGACAACACTTCCAAAGAGATTATATGTATGGTTTATTTCTAGATCATATGGGATTTCCTTTTTTCTTGCCTAAGTTTGTTATGAGTGATGAGGAATATCACAGGGTTTAAAATATGGAGAACAACACACTACACTCCATCTTTCTCAACATCATAAATAAACCCTTTTGCCCATTCATTCTTTTTTCCATTTTTTTA

mRNA sequence

ATGGCTCGTGGGAAGATCCAGATCAAGAGAATAGAAAACCCTACAAACAGGCAAGTGACTTACTCCAAGAGACGCAACGGGCTGTTCAAAAAAGCCAACGAATTGACGGTTCTCTGCGATGCTAAACACTGGAAAACTTCACGAGTGTTCAAAAAAGCCAACGAATTGACGGTTCTCTGCGATGCTAAAGTCTCCATTATCATGTTCTCCAGCACTGAAAAACTTCACGAGTATACCACCCCTGCCACTTCGACTAAGGAGCTTTTCGATCAGTACCAGAAGACTTTAGGCGTTGATTTATGGATCACTCACTATGAGAGAATGCAAGACAATCTCAAGAAGCTCAAAGATATCAACCGAAATCTCCGAAGGCAGATTAGGCAGAGGATGGGGGAATGTATGAATGATCTGAGTTTTGAAGAACTCCGATGTCTTGAGCAAGATATGGATAATGCTGTCAGGATCATCCGTGAACGCAAGTACCGGGTGATCTCAAACCAGATCGAAACACACAAGAAGAAGTTAAAGAGCGTAGGAGAAATACACAAGAGTCTTCTACAAGAGTTTGTAAGTGTGATTAAGTTTATTGGTAGATATACATTATGGTGTGTTACTATGTAA

Coding sequence (CDS)

ATGGCTCGTGGGAAGATCCAGATCAAGAGAATAGAAAACCCTACAAACAGGCAAGTGACTTACTCCAAGAGACGCAACGGGCTGTTCAAAAAAGCCAACGAATTGACGGTTCTCTGCGATGCTAAACACTGGAAAACTTCACGAGTGTTCAAAAAAGCCAACGAATTGACGGTTCTCTGCGATGCTAAAGTCTCCATTATCATGTTCTCCAGCACTGAAAAACTTCACGAGTATACCACCCCTGCCACTTCGACTAAGGAGCTTTTCGATCAGTACCAGAAGACTTTAGGCGTTGATTTATGGATCACTCACTATGAGAGAATGCAAGACAATCTCAAGAAGCTCAAAGATATCAACCGAAATCTCCGAAGGCAGATTAGGCAGAGGATGGGGGAATGTATGAATGATCTGAGTTTTGAAGAACTCCGATGTCTTGAGCAAGATATGGATAATGCTGTCAGGATCATCCGTGAACGCAAGTACCGGGTGATCTCAAACCAGATCGAAACACACAAGAAGAAGTTAAAGAGCGTAGGAGAAATACACAAGAGTCTTCTACAAGAGTTTGTAAGTGTGATTAAGTTTATTGGTAGATATACATTATGGTGTGTTACTATGTAA

Protein sequence

MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKHWKTSRVFKKANELTVLCDAKVSIIMFSSTEKLHEYTTPATSTKELFDQYQKTLGVDLWITHYERMQDNLKKLKDINRNLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKSVGEIHKSLLQEFVSVIKFIGRYTLWCVTM*
Homology
[Close]
BLAST of Csa3G865440 vs. Swiss-Prot
Match: DEFA_ANTMA (Floral homeotic protein DEFICIENS OS=Antirrhinum majus GN=DEFA PE=1 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 4.3e-64
Identity = 122/189 (64.55%), Postives = 151/189 (79.89%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKHWKTSRVFKKANELTVLC 60
           MARGKIQIKRIEN TNRQVTYSKRRNGLFKKA+EL                     +VLC
Sbjct: 1   MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHEL---------------------SVLC 60

Query: 61  DAKVSIIMFSSTEKLHEYTTPATSTKELFDQYQKTLGVDLWITHYERMQDNLKKLKDINR 120
           DAKVSIIM SST+KLHEY +P T+TK+LFDQYQK +GVDLW +HYE+MQ++LKKL ++NR
Sbjct: 61  DAKVSIIMISSTQKLHEYISPTTATKQLFDQYQKAVGVDLWSSHYEKMQEHLKKLNEVNR 120

Query: 121 NLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKSVGE 180
           NLRR+IRQRMGE +NDL +E++  L +DMDN++++IRERKY+VISNQI+T KKK+++V E
Sbjct: 121 NLRREIRQRMGESLNDLGYEQIVNLIEDMDNSLKLIRERKYKVISNQIDTSKKKVRNVEE 168

Query: 181 IHKSLLQEF 190
           IH++L+ EF
Sbjct: 181 IHRNLVLEF 168

[Close]
BLAST of Csa3G865440 vs. Swiss-Prot
Match: MADS1_PETHY (Floral homeotic protein PMADS 1 OS=Petunia hybrida GN=PMADS1 PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 6.2e-63
Identity = 121/189 (64.02%), Postives = 150/189 (79.37%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKHWKTSRVFKKANELTVLC 60
           MARGKIQIKRIEN TNRQVTYSKRRNGL                     FKKANELTVLC
Sbjct: 1   MARGKIQIKRIENQTNRQVTYSKRRNGL---------------------FKKANELTVLC 60

Query: 61  DAKVSIIMFSSTEKLHEYTTPATSTKELFDQYQKTLGVDLWITHYERMQDNLKKLKDINR 120
           DAKVSIIM SST KLHE+ +P+ +TK+LFD YQKT+GVDLW +HYE+MQ+ L+KLK++NR
Sbjct: 61  DAKVSIIMISSTGKLHEFISPSITTKQLFDLYQKTVGVDLWNSHYEKMQEQLRKLKEVNR 120

Query: 121 NLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKSVGE 180
           NLR++IRQRMGE +NDL++E+L  L +++DN++++IRERKY+VI NQIET KKK+++V E
Sbjct: 121 NLRKEIRQRMGESLNDLNYEQLEELMENVDNSLKLIRERKYKVIGNQIETFKKKVRNVEE 168

Query: 181 IHKSLLQEF 190
           IH++LL EF
Sbjct: 181 IHRNLLLEF 168

[Close]
BLAST of Csa3G865440 vs. Swiss-Prot
Match: AP3_ARATH (Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3 PE=1 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 4.0e-54
Identity = 109/188 (57.98%), Postives = 134/188 (71.28%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKHWKTSRVFKKANELTVLC 60
           MARGKIQIKRIEN TNRQVTYSKRRNGLFKKA+EL                     TVLC
Sbjct: 1   MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHEL---------------------TVLC 60

Query: 61  DAKVSIIMFSSTEKLHEYTTPATSTKELFDQYQKTLGVDLWITHYERMQDNLKKLKDINR 120
           DA+VSIIMFSS+ KLHEY +P T+TKE+ D YQ    VD+W T YERMQ+  +KL + NR
Sbjct: 61  DARVSIIMFSSSNKLHEYISPNTTTKEIVDLYQTISDVDVWATQYERMQETKRKLLETNR 120

Query: 121 NLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKSVGE 180
           NLR QI+QR+GEC+++L  +ELR LE +M+N  +++RERK++ + NQIET KKK KS  +
Sbjct: 121 NLRTQIKQRLGECLDELDIQELRRLEDEMENTFKLVRERKFKSLGNQIETTKKKNKSQQD 167

Query: 181 IHKSLLQE 189
           I K+L+ E
Sbjct: 181 IQKNLIHE 167

[Close]
BLAST of Csa3G865440 vs. Swiss-Prot
Match: MAD16_ORYSJ (MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica GN=MADS16 PE=1 SV=2)

HSP 1 Score: 198.4 bits (503), Expect = 7.9e-50
Identity = 104/188 (55.32%), Postives = 128/188 (68.09%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKHWKTSRVFKKANELTVLC 60
           M RGKI+IKRIEN TNRQVTYSKRR G                     + KKA ELTVLC
Sbjct: 1   MGRGKIEIKRIENATNRQVTYSKRRTG---------------------IMKKARELTVLC 60

Query: 61  DAKVSIIMFSSTEKLHEYTTPATSTKELFDQYQKTLGVDLWITHYERMQDNLKKLKDINR 120
           DA+V+IIMFSST K HE+ +P+T  K +FD+YQ+ +G  LWI  YE MQ  L  LKDINR
Sbjct: 61  DAQVAIIMFSSTGKYHEFCSPSTDIKGIFDRYQQAIGTSLWIEQYENMQRTLSHLKDINR 120

Query: 121 NLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKSVGE 180
           NLR +IRQRMGE ++ L F+ELR LEQ++D A++ +R RKY VI+ Q ET+KKK+K   E
Sbjct: 121 NLRTEIRQRMGEDLDGLEFDELRGLEQNVDAALKEVRHRKYHVITTQTETYKKKVKHSYE 167

Query: 181 IHKSLLQE 189
            +++L QE
Sbjct: 181 AYETLQQE 167

[Close]
BLAST of Csa3G865440 vs. Swiss-Prot
Match: CMB2_DIACA (MADS-box protein CMB2 OS=Dianthus caryophyllus GN=CMB2 PE=2 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.7e-42
Identity = 89/188 (47.34%), Postives = 120/188 (63.83%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKHWKTSRVFKKANELTVLC 60
           M RGK++I++IEN TNRQVT+SKRRNG                     + KKA ELTVLC
Sbjct: 1   MGRGKLEIRKIENKTNRQVTFSKRRNG---------------------IMKKAQELTVLC 60

Query: 61  DAKVSIIMFSSTEKLHEYTTPATSTKELFDQYQKTLGVDLWITHYERMQDNLKKLKDINR 120
           DAKVS++M SST KLH Y +P  S K+++D+YQK  GVDLW   +ERMQ+  +K+ ++N 
Sbjct: 61  DAKVSLLMISSTHKLHHYLSPGVSLKKMYDEYQKIEGVDLWRKQWERMQEQHRKVLELNS 120

Query: 121 NLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKSVGE 180
            LRR+I +RMG  +  L+  EL  L+Q+M+ A+  IR +KY  I NQ  T +KK+K++ E
Sbjct: 121 LLRREISRRMGGDLEGLTLVELSALQQEMEEAIIQIRNKKYHTIKNQTGTTRKKIKNLEE 167

Query: 181 IHKSLLQE 189
            H  L+ E
Sbjct: 181 RHTDLVME 167

[Close]
BLAST of Csa3G865440 vs. TrEMBL
Match: A0A0A0LGG1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G865440 PE=4 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 2.7e-113
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKHWKTSRVFKKANELTVLC 60
           MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKHWKTSRVFKKANELTVLC
Sbjct: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKHWKTSRVFKKANELTVLC 60

Query: 61  DAKVSIIMFSSTEKLHEYTTPATSTKELFDQYQKTLGVDLWITHYERMQDNLKKLKDINR 120
           DAKVSIIMFSSTEKLHEYTTPATSTKELFDQYQKTLGVDLWITHYERMQDNLKKLKDINR
Sbjct: 61  DAKVSIIMFSSTEKLHEYTTPATSTKELFDQYQKTLGVDLWITHYERMQDNLKKLKDINR 120

Query: 121 NLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKSVGE 180
           NLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKSVGE
Sbjct: 121 NLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKSVGE 180

Query: 181 IHKSLLQEFVSVIKFIGRYTLWCVTM 207
           IHKSLLQEFVSVIKFIGRYTLWCVTM
Sbjct: 181 IHKSLLQEFVSVIKFIGRYTLWCVTM 206

[Close]
BLAST of Csa3G865440 vs. TrEMBL
Match: Q58IJ2_CUCSA (MADS box protein OS=Cucumis sativus GN=MADS1 PE=2 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 1.9e-82
Identity = 163/189 (86.24%), Postives = 165/189 (87.30%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKHWKTSRVFKKANELTVLC 60
           MARGKIQIKRIENPTNRQVTYSKRRNGL KKANEL                     TVLC
Sbjct: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLLKKANEL---------------------TVLC 60

Query: 61  DAKVSIIMFSSTEKLHEYTTPATSTKELFDQYQKTLGVDLWITHYERMQDNLKKLKDINR 120
           DAKVSIIMFSST KLHEY +PATSTKELFDQYQKTLGVDLWITHYERMQDNLKKLKDINR
Sbjct: 61  DAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWITHYERMQDNLKKLKDINR 120

Query: 121 NLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKSVGE 180
           NLRRQIRQRMGECMNDLSFEELRCLEQDMD+AVRIIRERKYRVISNQIETHKKKLKSVGE
Sbjct: 121 NLRRQIRQRMGECMNDLSFEELRCLEQDMDSAVRIIRERKYRVISNQIETHKKKLKSVGE 168

Query: 181 IHKSLLQEF 190
           IHKSLLQEF
Sbjct: 181 IHKSLLQEF 168

[Close]
BLAST of Csa3G865440 vs. TrEMBL
Match: F4ZKM2_ACTER (AP3 OS=Actinidia eriantha PE=2 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 1.1e-66
Identity = 131/192 (68.23%), Postives = 157/192 (81.77%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKHWKTSRVFKKANELTVLC 60
           MARGKIQIKRIEN TNRQVTYSKRRNGL                     FKKANELTVLC
Sbjct: 1   MARGKIQIKRIENSTNRQVTYSKRRNGL---------------------FKKANELTVLC 60

Query: 61  DAKVSIIMFSSTEKLHEYTTPATSTKELFDQYQKTLGVDLWITHYERMQDNLKKLKDINR 120
           DAKVSIIM SST KLHEY +P+ STK+LFDQYQKTLG+DLW +HYE+MQ++LKKLKD+NR
Sbjct: 61  DAKVSIIMISSTGKLHEYISPSVSTKQLFDQYQKTLGIDLWSSHYEKMQEHLKKLKDVNR 120

Query: 121 NLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKSVGE 180
           N RR+IRQRMGE +N+LS+E+LR LEQDM+ +++IIR+RKY+VI NQIET+KKKL++V E
Sbjct: 121 NFRREIRQRMGESLNELSYEDLRGLEQDMETSLKIIRDRKYKVIGNQIETYKKKLRNVEE 171

Query: 181 IHKSLLQEFVSV 193
           IH+SLL EF ++
Sbjct: 181 IHRSLLHEFDAI 171

[Close]
BLAST of Csa3G865440 vs. TrEMBL
Match: M4IUD9_CORFO (Apetala 3 OS=Cornus florida GN=AP3 PE=2 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 4.6e-65
Identity = 129/189 (68.25%), Postives = 155/189 (82.01%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKHWKTSRVFKKANELTVLC 60
           MARGKIQIKRIEN TNRQVTYSKRRNGL                     FKKANELTVLC
Sbjct: 1   MARGKIQIKRIENSTNRQVTYSKRRNGL---------------------FKKANELTVLC 60

Query: 61  DAKVSIIMFSSTEKLHEYTTPATSTKELFDQYQKTLGVDLWITHYERMQDNLKKLKDINR 120
           DAKVSIIMFSST KLHE+ +P+T+TK+LFDQYQKTLG+DLW +HYERMQ+NLKKLKDINR
Sbjct: 61  DAKVSIIMFSSTGKLHEFISPSTTTKQLFDQYQKTLGIDLWSSHYERMQENLKKLKDINR 120

Query: 121 NLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKSVGE 180
            LRR+IRQR GE +NDLS+E+L  L++DM+ +++IIR+RKY+VI NQIET+KKK+++V E
Sbjct: 121 KLRREIRQRTGESLNDLSYEDLLRLQEDMEISLKIIRDRKYKVIGNQIETYKKKVRNVEE 168

Query: 181 IHKSLLQEF 190
           IH++LL EF
Sbjct: 181 IHRNLLHEF 168

[Close]
BLAST of Csa3G865440 vs. TrEMBL
Match: M4IUD6_CORKO (Apetala 3 OS=Cornus kousa GN=AP3 PE=2 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 1.8e-64
Identity = 128/189 (67.72%), Postives = 154/189 (81.48%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKHWKTSRVFKKANELTVLC 60
           MARGKIQIKRIEN TNRQVTYSKRRNGL                     FKKANELTVLC
Sbjct: 1   MARGKIQIKRIENSTNRQVTYSKRRNGL---------------------FKKANELTVLC 60

Query: 61  DAKVSIIMFSSTEKLHEYTTPATSTKELFDQYQKTLGVDLWITHYERMQDNLKKLKDINR 120
           DAKVSIIMFSST KLHE+ +P+T+TK+LFDQYQKTLG+DLW +HYERMQ+NLKKLK+INR
Sbjct: 61  DAKVSIIMFSSTGKLHEFISPSTTTKQLFDQYQKTLGIDLWSSHYERMQENLKKLKEINR 120

Query: 121 NLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKSVGE 180
             RR+IRQR GE +NDLS+E+L  L++DM+ +++IIR+RKY+VI NQIET+KKKL++V E
Sbjct: 121 KFRREIRQRTGESLNDLSYEDLLRLQEDMEISLKIIRDRKYKVIGNQIETYKKKLRNVEE 168

Query: 181 IHKSLLQEF 190
           IH++LL EF
Sbjct: 181 IHRNLLHEF 168

[Close]
BLAST of Csa3G865440 vs. TAIR10
Match: AT3G54340.1 (AT3G54340.1 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 212.6 bits (540), Expect = 2.3e-55
Identity = 109/188 (57.98%), Postives = 134/188 (71.28%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKHWKTSRVFKKANELTVLC 60
           MARGKIQIKRIEN TNRQVTYSKRRNGLFKKA+EL                     TVLC
Sbjct: 1   MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHEL---------------------TVLC 60

Query: 61  DAKVSIIMFSSTEKLHEYTTPATSTKELFDQYQKTLGVDLWITHYERMQDNLKKLKDINR 120
           DA+VSIIMFSS+ KLHEY +P T+TKE+ D YQ    VD+W T YERMQ+  +KL + NR
Sbjct: 61  DARVSIIMFSSSNKLHEYISPNTTTKEIVDLYQTISDVDVWATQYERMQETKRKLLETNR 120

Query: 121 NLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKSVGE 180
           NLR QI+QR+GEC+++L  +ELR LE +M+N  +++RERK++ + NQIET KKK KS  +
Sbjct: 121 NLRTQIKQRLGECLDELDIQELRRLEDEMENTFKLVRERKFKSLGNQIETTKKKNKSQQD 167

Query: 181 IHKSLLQE 189
           I K+L+ E
Sbjct: 181 IQKNLIHE 167

[Close]
BLAST of Csa3G865440 vs. TAIR10
Match: AT5G20240.1 (AT5G20240.1 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 114.4 bits (285), Expect = 8.4e-26
Identity = 62/192 (32.29%), Postives = 103/192 (53.65%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKHWKTSRVFKKANELTVLC 60
           M RGKI+IKRIEN  NR VT+SKRRNGL KKA E+                     TVLC
Sbjct: 1   MGRGKIEIKRIENANNRVVTFSKRRNGLVKKAKEI---------------------TVLC 60

Query: 61  DAKVSIIMFSSTEKLHEYTTPATSTKELFDQYQKTLGVDLWITHYERMQDNLKKLKDINR 120
           DAKV++I+F+S  K+ +Y  P+     + DQYQK  G  LW   +E + + + ++K  N 
Sbjct: 61  DAKVALIIFASNGKMIDYCCPSMDLGAMLDQYQKLSGKKLWDAKHENLSNEIDRIKKEND 120

Query: 121 NLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKSVGE 180
           +L+ ++R   GE +  L+ + L  +E  +++ +  +R+ +  ++ ++    K   +   +
Sbjct: 121 SLQLELRHLKGEDIQSLNLKNLMAVEHAIEHGLDKVRDHQMEILISKRRNEKMMAEEQRQ 171

Query: 181 IHKSLLQEFVSV 193
           +   L Q+ +++
Sbjct: 181 LTFQLQQQEMAI 171

[Close]
BLAST of Csa3G865440 vs. TAIR10
Match: AT5G60910.1 (AT5G60910.1 AGAMOUS-like 8)

HSP 1 Score: 110.5 bits (275), Expect = 1.2e-24
Identity = 70/199 (35.18%), Postives = 113/199 (56.78%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKHWKTSRVFKKANELTVLC 60
           M RG++Q+KRIEN  NRQVT+SKRR+GL                      KKA+E++VLC
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRSGL---------------------LKKAHEISVLC 60

Query: 61  DAKVSIIMFSSTEKLHEYTTPATSTK--ELFDQY----QKTLGVDL-----WITHYERMQ 120
           DA+V++I+FSS  KL EY+T +   +  E +D+Y    ++ +G D+     W+  + +++
Sbjct: 61  DAEVALIVFSSKGKLFEYSTDSCMERILERYDRYLYSDKQLVGRDVSQSENWVLEHAKLK 120

Query: 121 DNLKKLKDINRNLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIE 180
             ++ L+   RN        MGE ++ LS +EL+ LE  +D A++ IR RK + +   I 
Sbjct: 121 ARVEVLEKNKRNF-------MGEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESIS 171

Query: 181 THKKKLKSVGEIHKSLLQE 189
             +KK K++ + + SLL++
Sbjct: 181 ALQKKDKALQDHNNSLLKK 171

[Close]
BLAST of Csa3G865440 vs. TAIR10
Match: AT4G11880.1 (AT4G11880.1 AGAMOUS-like 14)

HSP 1 Score: 108.6 bits (270), Expect = 4.6e-24
Identity = 72/195 (36.92%), Postives = 113/195 (57.95%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKHWKTSRVFKKANELTVLC 60
           M RGK ++KRIEN T+RQVT+SKRRNGL                      KKA EL+VLC
Sbjct: 1   MVRGKTEMKRIENATSRQVTFSKRRNGL---------------------LKKAFELSVLC 60

Query: 61  DAKVSIIMFSSTEKLHEYTTPATSTKELFDQYQKTLGVDLWITHYERMQDNLKKLKDINR 120
           DA+V++I+FS   KL+E+++ ++S  +  ++YQK +  DL   H  +  DN ++ KD   
Sbjct: 61  DAEVALIIFSPRGKLYEFSS-SSSIPKTVERYQKRI-QDLGSNH--KRNDNSQQSKDETY 120

Query: 121 NLRRQI-------RQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKK 180
            L R+I       R+ MGE ++  S EEL+ LE  +D ++  IR +KY+++  + E  K+
Sbjct: 121 GLARKIEHLEISTRKMMGEGLDASSIEELQQLENQLDRSLMKIRAKKYQLLREETEKLKE 170

Query: 181 KLKSVGEIHKSLLQE 189
           K +++   +K L+++
Sbjct: 181 KERNLIAENKMLMEK 170

[Close]
BLAST of Csa3G865440 vs. TAIR10
Match: AT5G13790.1 (AT5G13790.1 AGAMOUS-like 15)

HSP 1 Score: 105.5 bits (262), Expect = 3.9e-23
Identity = 70/200 (35.00%), Postives = 109/200 (54.50%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKHWKTSRVFKKANELTVLC 60
           M RGKI+IKRIEN  +RQVT+SKRR+GL KK                     A EL+VLC
Sbjct: 1   MGRGKIEIKRIENANSRQVTFSKRRSGLLKK---------------------ARELSVLC 60

Query: 61  DAKVSIIMFSSTEKLHEYTTPATSTKELFDQYQKTLGVDLWITHYERMQDNLKKLKDINR 120
           DA+V++I+FS + KL EY+  +T  K+   +Y          +  E     +  LKD   
Sbjct: 61  DAEVAVIVFSKSGKLFEYS--STGMKQTLSRYGNHQSSS--ASKAEEDCAEVDILKDQLS 120

Query: 121 NLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKSVGE 180
            L+ +  Q  G+ +N L+F+EL+ LEQ + +A+  +RERK R+++NQ+E  + K +    
Sbjct: 121 KLQEKHLQLQGKGLNPLTFKELQSLEQQLYHALITVRERKERLLTNQLEESRLKEQRAEL 175

Query: 181 IHKSLLQEFVSVIKFIGRYT 201
            +++L ++   +  F+  +T
Sbjct: 181 ENETLRRQVQELRSFLPSFT 175

[Close]
BLAST of Csa3G865440 vs. NCBI nr
Match: gi|700204876|gb|KGN60009.1| (hypothetical protein Csa_3G865440 [Cucumis sativus])

HSP 1 Score: 416.0 bits (1068), Expect = 3.8e-113
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKHWKTSRVFKKANELTVLC 60
           MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKHWKTSRVFKKANELTVLC
Sbjct: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKHWKTSRVFKKANELTVLC 60

Query: 61  DAKVSIIMFSSTEKLHEYTTPATSTKELFDQYQKTLGVDLWITHYERMQDNLKKLKDINR 120
           DAKVSIIMFSSTEKLHEYTTPATSTKELFDQYQKTLGVDLWITHYERMQDNLKKLKDINR
Sbjct: 61  DAKVSIIMFSSTEKLHEYTTPATSTKELFDQYQKTLGVDLWITHYERMQDNLKKLKDINR 120

Query: 121 NLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKSVGE 180
           NLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKSVGE
Sbjct: 121 NLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKSVGE 180

Query: 181 IHKSLLQEFVSVIKFIGRYTLWCVTM 207
           IHKSLLQEFVSVIKFIGRYTLWCVTM
Sbjct: 181 IHKSLLQEFVSVIKFIGRYTLWCVTM 206

[Close]
BLAST of Csa3G865440 vs. NCBI nr
Match: gi|778686714|ref|XP_011652440.1| (PREDICTED: floral homeotic protein DEFICIENS [Cucumis sativus])

HSP 1 Score: 317.8 bits (813), Expect = 1.4e-83
Identity = 168/195 (86.15%), Postives = 168/195 (86.15%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKHWKTSRVFKKANELTVLC 60
           MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAK                  
Sbjct: 33  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAK------------------ 92

Query: 61  DAKVSIIMFSST------EKLHEYTTPATSTKELFDQYQKTLGVDLWITHYERMQDNLKK 120
              VSIIMFSST      EKLHEYTTPATSTKELFDQYQKTLGVDLWITHYERMQDNLKK
Sbjct: 93  ---VSIIMFSSTGKLHDTEKLHEYTTPATSTKELFDQYQKTLGVDLWITHYERMQDNLKK 152

Query: 121 LKDINRNLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKK 180
           LKDINRNLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKK
Sbjct: 153 LKDINRNLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKK 206

Query: 181 LKSVGEIHKSLLQEF 190
           LKSVGEIHKSLLQEF
Sbjct: 213 LKSVGEIHKSLLQEF 206

[Close]
BLAST of Csa3G865440 vs. NCBI nr
Match: gi|659133017|ref|XP_008466510.1| (PREDICTED: floral homeotic protein DEFICIENS [Cucumis melo])

HSP 1 Score: 316.2 bits (809), Expect = 4.1e-83
Identity = 164/189 (86.77%), Postives = 166/189 (87.83%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKHWKTSRVFKKANELTVLC 60
           MARGKIQIKRIENPTNRQVTYSKRRNGL                     FKKANELTVLC
Sbjct: 27  MARGKIQIKRIENPTNRQVTYSKRRNGL---------------------FKKANELTVLC 86

Query: 61  DAKVSIIMFSSTEKLHEYTTPATSTKELFDQYQKTLGVDLWITHYERMQDNLKKLKDINR 120
           DAKVSIIMFSST KLHEY +PATSTKELFDQYQKTLGVDLWI+HYERMQDNLKKLKDINR
Sbjct: 87  DAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQDNLKKLKDINR 146

Query: 121 NLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKSVGE 180
           NLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKSVGE
Sbjct: 147 NLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKSVGE 194

Query: 181 IHKSLLQEF 190
           IHKSLLQEF
Sbjct: 207 IHKSLLQEF 194

[Close]
BLAST of Csa3G865440 vs. NCBI nr
Match: gi|821595311|ref|NP_001295864.1| (floral homeotic protein DEFICIENS [Cucumis sativus])

HSP 1 Score: 313.5 bits (802), Expect = 2.7e-82
Identity = 163/189 (86.24%), Postives = 165/189 (87.30%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKHWKTSRVFKKANELTVLC 60
           MARGKIQIKRIENPTNRQVTYSKRRNGL KKANEL                     TVLC
Sbjct: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLLKKANEL---------------------TVLC 60

Query: 61  DAKVSIIMFSSTEKLHEYTTPATSTKELFDQYQKTLGVDLWITHYERMQDNLKKLKDINR 120
           DAKVSIIMFSST KLHEY +PATSTKELFDQYQKTLGVDLWITHYERMQDNLKKLKDINR
Sbjct: 61  DAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWITHYERMQDNLKKLKDINR 120

Query: 121 NLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKSVGE 180
           NLRRQIRQRMGECMNDLSFEELRCLEQDMD+AVRIIRERKYRVISNQIETHKKKLKSVGE
Sbjct: 121 NLRRQIRQRMGECMNDLSFEELRCLEQDMDSAVRIIRERKYRVISNQIETHKKKLKSVGE 168

Query: 181 IHKSLLQEF 190
           IHKSLLQEF
Sbjct: 181 IHKSLLQEF 168

[Close]
BLAST of Csa3G865440 vs. NCBI nr
Match: gi|315418854|gb|ADU15474.1| (AP3 [Actinidia eriantha])

HSP 1 Score: 261.2 bits (666), Expect = 1.6e-66
Identity = 131/192 (68.23%), Postives = 157/192 (81.77%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKHWKTSRVFKKANELTVLC 60
           MARGKIQIKRIEN TNRQVTYSKRRNGL                     FKKANELTVLC
Sbjct: 1   MARGKIQIKRIENSTNRQVTYSKRRNGL---------------------FKKANELTVLC 60

Query: 61  DAKVSIIMFSSTEKLHEYTTPATSTKELFDQYQKTLGVDLWITHYERMQDNLKKLKDINR 120
           DAKVSIIM SST KLHEY +P+ STK+LFDQYQKTLG+DLW +HYE+MQ++LKKLKD+NR
Sbjct: 61  DAKVSIIMISSTGKLHEYISPSVSTKQLFDQYQKTLGIDLWSSHYEKMQEHLKKLKDVNR 120

Query: 121 NLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKSVGE 180
           N RR+IRQRMGE +N+LS+E+LR LEQDM+ +++IIR+RKY+VI NQIET+KKKL++V E
Sbjct: 121 NFRREIRQRMGESLNELSYEDLRGLEQDMETSLKIIRDRKYKVIGNQIETYKKKLRNVEE 171

Query: 181 IHKSLLQEFVSV 193
           IH+SLL EF ++
Sbjct: 181 IHRSLLHEFDAI 171

The following BLAST results are available for this feature:
BLAST of Csa3G865440 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DEFA_ANTMA4.3e-6464.55Floral homeotic protein DEFICIENS OS=Antirrhinum majus GN=DEFA PE=1 SV=1[more]
MADS1_PETHY6.2e-6364.02Floral homeotic protein PMADS 1 OS=Petunia hybrida GN=PMADS1 PE=2 SV=1[more]
AP3_ARATH4.0e-5457.98Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3 PE=1 SV=1[more]
MAD16_ORYSJ7.9e-5055.32MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica GN=MADS16 PE=1 ... [more]
CMB2_DIACA2.7e-4247.34MADS-box protein CMB2 OS=Dianthus caryophyllus GN=CMB2 PE=2 SV=1[more]
BLAST of Csa3G865440 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LGG1_CUCSA2.7e-113100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G865440 PE=4 SV=1[more]
Q58IJ2_CUCSA1.9e-8286.24MADS box protein OS=Cucumis sativus GN=MADS1 PE=2 SV=1[more]
F4ZKM2_ACTER1.1e-6668.23AP3 OS=Actinidia eriantha PE=2 SV=1[more]
M4IUD9_CORFO4.6e-6568.25Apetala 3 OS=Cornus florida GN=AP3 PE=2 SV=1[more]
M4IUD6_CORKO1.8e-6467.72Apetala 3 OS=Cornus kousa GN=AP3 PE=2 SV=1[more]
BLAST of Csa3G865440 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G54340.12.3e-5557.98 K-box region and MADS-box transcription factor family protein [more]
AT5G20240.18.4e-2632.29 K-box region and MADS-box transcription factor family protein [more]
AT5G60910.11.2e-2435.18 AGAMOUS-like 8[more]
AT4G11880.14.6e-2436.92 AGAMOUS-like 14[more]
AT5G13790.13.9e-2335.00 AGAMOUS-like 15[more]
BLAST of Csa3G865440 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700204876|gb|KGN60009.1|3.8e-113100.00hypothetical protein Csa_3G865440 [Cucumis sativus][more]
gi|778686714|ref|XP_011652440.1|1.4e-8386.15PREDICTED: floral homeotic protein DEFICIENS [Cucumis sativus][more]
gi|659133017|ref|XP_008466510.1|4.1e-8386.77PREDICTED: floral homeotic protein DEFICIENS [Cucumis melo][more]
gi|821595311|ref|NP_001295864.1|2.7e-8286.24floral homeotic protein DEFICIENS [Cucumis sativus][more]
gi|315418854|gb|ADU15474.1|1.6e-6668.23AP3 [Actinidia eriantha][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002100TF_MADSbox
IPR002487TF_Kbox
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0046983protein dimerization activity
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048507 meristem development
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0045944 positive regulation of transcription from RNA polymerase II promoter
biological_process GO:0048441 petal development
biological_process GO:0010093 specification of floral organ identity
biological_process GO:0048443 stamen development
biological_process GO:0009909 regulation of flower development
biological_process GO:0009860 pollen tube growth
biological_process GO:0009827 plant-type cell wall modification
biological_process GO:0048481 plant ovule development
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU091303cucumber EST collection version 3.0transcribed_cluster
CU091313cucumber EST collection version 3.0transcribed_cluster
CU091507cucumber EST collection version 3.0transcribed_cluster
CU096457cucumber EST collection version 3.0transcribed_cluster
CU137849cucumber EST collection version 3.0transcribed_cluster
CU150714cucumber EST collection version 3.0transcribed_cluster
CU150716cucumber EST collection version 3.0transcribed_cluster
CU165246cucumber EST collection version 3.0transcribed_cluster
CU168552cucumber EST collection version 3.0transcribed_cluster
CU170811cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G865440.1Csa3G865440.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU096457CU096457transcribed_cluster
CU165246CU165246transcribed_cluster
CU170811CU170811transcribed_cluster
CU137849CU137849transcribed_cluster
CU150714CU150714transcribed_cluster
CU091303CU091303transcribed_cluster
CU168552CU168552transcribed_cluster
CU091507CU091507transcribed_cluster
CU091313CU091313transcribed_cluster
CU150716CU150716transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 3..23
score: 2.6E-17coord: 23..38
score: 2.6
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 49..78
score: 4.6E-11coord: 10..42
score: 1.6
IPR002100Transcription factor, MADS-boxSMARTSM00432madsneu2coord: 1..81
score: 3.6
IPR002100Transcription factor, MADS-boxPROFILEPS50066MADS_BOX_2coord: 45..82
score: 14.984coord: 1..42
score: 24
IPR002100Transcription factor, MADS-boxunknownSSF55455SRF-likecoord: 48..116
score: 1.27E-19coord: 1..42
score: 4.06
IPR002487Transcription factor, K-boxPFAMPF01486K-boxcoord: 103..189
score: 6.7
IPR002487Transcription factor, K-boxPROFILEPS51297K_BOXcoord: 105..201
score: 15
NoneNo IPR availableunknownCoilCoilcoord: 105..132
scor
NoneNo IPR availablePANTHERPTHR11945MADS BOX PROTEINcoord: 2..34
score: 2.3E-101coord: 56..189
score: 2.3E
NoneNo IPR availablePANTHERPTHR11945:SF219FLORAL HOMEOTIC PROTEIN APETALA 3coord: 56..189
score: 2.3E-101coord: 2..34
score: 2.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G865440Cla020805Watermelon (97103) v1cuwmB244
Csa3G865440MELO3C003778Melon (DHL92) v3.5.1cumeB222
Csa3G865440ClCG05G018600Watermelon (Charleston Gray)cuwcgB231
Csa3G865440Lsi04G017160Bottle gourd (USVL1VR-Ls)culsiB192
Csa3G865440MELO3C003778.2Melon (DHL92) v3.6.1cumedB208
Csa3G865440Cla97C05G099940Watermelon (97103) v2cuwmbB216
Csa3G865440Bhi09G001886Wax gourdcuwgoB342
Csa3G865440CSPI03G43140Wild cucumber (PI 183967)cpicuB120
Csa3G865440Cucsa.342790Cucumber (Gy14) v1cgycuB478
Csa3G865440CmaCh01G019410Cucurbita maxima (Rimu)cmacuB444
Csa3G865440CmaCh09G001250Cucurbita maxima (Rimu)cmacuB017
Csa3G865440CmoCh09G001220Cucurbita moschata (Rifu)cmocuB008
Csa3G865440CmoCh01G020030Cucurbita moschata (Rifu)cmocuB431
Csa3G865440Cp4.1LG06g00970Cucurbita pepo (Zucchini)cpecuB779
Csa3G865440Cp4.1LG02g07740Cucurbita pepo (Zucchini)cpecuB556
Csa3G865440CsGy3G040720Cucumber (Gy14) v2cgybcuB110
Csa3G865440Carg08694Silver-seed gourdcarcuB0111
Csa3G865440Carg17172Silver-seed gourdcarcuB0961
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G865440Silver-seed gourdcarcuB0992
Csa3G865440Watermelon (97103) v2cuwmbB172
Csa3G865440Watermelon (97103) v2cuwmbB248
Csa3G865440Wax gourdcuwgoB313
Csa3G865440Wax gourdcuwgoB332
Csa3G865440Cucumber (Chinese Long) v2cucuB051
Csa3G865440Cucumber (Chinese Long) v2cucuB112
Csa3G865440Cucumber (Gy14) v1cgycuB023
Csa3G865440Cucumber (Gy14) v1cgycuB235
Csa3G865440Cucurbita maxima (Rimu)cmacuB183
Csa3G865440Cucurbita maxima (Rimu)cmacuB661
Csa3G865440Cucurbita maxima (Rimu)cmacuB795
Csa3G865440Cucurbita maxima (Rimu)cmacuB858
Csa3G865440Cucurbita moschata (Rifu)cmocuB167
Csa3G865440Cucurbita moschata (Rifu)cmocuB788
Csa3G865440Cucurbita moschata (Rifu)cmocuB845
Csa3G865440Melon (DHL92) v3.5.1cumeB203
Csa3G865440Melon (DHL92) v3.5.1cumeB258
Csa3G865440Watermelon (Charleston Gray)cuwcgB203
Csa3G865440Watermelon (Charleston Gray)cuwcgB263
Csa3G865440Watermelon (97103) v1cuwmB210
Csa3G865440Watermelon (97103) v1cuwmB257
Csa3G865440Watermelon (97103) v1cuwmB273
Csa3G865440Cucurbita pepo (Zucchini)cpecuB065
Csa3G865440Cucurbita pepo (Zucchini)cpecuB110
Csa3G865440Cucurbita pepo (Zucchini)cpecuB275
Csa3G865440Cucurbita pepo (Zucchini)cpecuB481
Csa3G865440Cucurbita pepo (Zucchini)cpecuB828
Csa3G865440Bottle gourd (USVL1VR-Ls)culsiB171
Csa3G865440Bottle gourd (USVL1VR-Ls)culsiB240
Csa3G865440Cucumber (Gy14) v2cgybcuB066
Csa3G865440Cucumber (Gy14) v2cgybcuB257
Csa3G865440Melon (DHL92) v3.6.1cumedB189
Csa3G865440Melon (DHL92) v3.6.1cumedB247