Cla020805 (gene) Watermelon (97103) v1

NameCla020805
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionMADS-box transcription factor (AHRD V1 ***- F1T117_9ERIC); contains Interpro domain(s) IPR002100 Transcription factor, MADS-box
LocationChr5 : 26598690 .. 26602534 (-)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCGTGGGAAGATCCAGATCAAGAGAATCGAAAACCCCACAAACAGGCAAGTCACTTACTCCAAACGACGCAACGGCCTCTTCAAAAAGGCCAACGAACTCACCGTCCTCTGCGATGCTAAAGTCTCCATTATCATGTTCTCTAGCACTGGAAAACTCCACGAGTATATCAGCCCTGCCACTTCGTAATAATCTCTCAAACTAACCCTACTTTTTTTTCTTTTTATTTCTTTCTAATTTCCTCTTCATATTAATAATCTCTCTTTCATTTAGGACCAAGGAGCTTTTCGATCAGTACCAGAAGACTTTAGGCGTTGATTTATGGATCTCTCACTATGAGGTCTTTTAATTGCCTTCCTGATTTATCTCTCATATTTTTACTTAATTCATCATTCTTTTATGTAATTTGTAATTTGGGGCTGTACCTACGTCCAGAGAATGCAAGACAATCTGAAGAAGCTTAAAGATGTGAATCGAAATCTCCGCAAGCAGATTAGGTACGCTACATTCATCATTCATCATTCATCCTCATCTCTACTTTTTTTTTTTTTTTTTTTAATTTAAATATGATTAATTAATTTTATATAGGCAGAGGATGGGGGAATGTATGAATGATCTGAGTTTTGAAGAACTGCGCTGTCTTGAGCAAGATATGGATAATGCTGTCAGGATCATCCGTGAACGCAAGGTGCGCGACAAATCCATTATTTCCTTTTTTTTATTATTCTTAACTAATTGCCTCAAAGGTAGTTTACAATTATAATCTCCATTTTTTTTTTTAGTTGGTTCTATAACTAAGATCAGTAGTTGTAGTTTGTCTCGGGAGTTGGGTTTAAATGTTTTTTTTTAATTAATTTTTGTGGTTGATGTGCTTAATACATCGCTCCTATTTTAGATAATAATTATTATTTTTTGGTTTATTACATGTTTAGGAATGATTTTGAGAGAGTCAGTACCATTTTTGTCATTTTTTAAAATCACTCTCAAATATGTCTTTTATCATTCAATAACAATTTTGATAATATAAAAATTTTATTTGAAAATGTAAAACTAGGTACTAAATTGATTTTAATATGATTAAATCAAACATATAATTAATCAGTTTTCTCTTTTAGAGAGATTTGCAAATGCTTAATAATTAACTATATCCTACAAACACTATATTTTGATTTTAAGCATAATAATGGGGTGAACGCTTGCGTCGAGATACCCTTTTAGAACAATTATGACTCTATTAGATAATTTTTTTATTTTTAGTTTTTTTAAATTATGTTTTCTATAACAATTTATATACCACGGTTTACATATTTTCTAAATTGCATTTTAATTCTTAGGCAATTTTTTTGTTTACATAAATCTGGGTGACACAAACATATACATAATTTGTTTTTGACAAAGATACATATAATATGAATCTAGAATACCTTTAACACCTTCATCATCTCCCGCATTCCTTCATTAATATTCAATAATAACGGGAGTCCAAAAGAACATTACAAGAGGGGCTAGAGTGAAGCCCAATAGAAGAAGTGGATTACATAACGCCAACAAGATTGAGGGCAATGGGAGGAAGGGTGCACCCTCATCATCTCCCAAGATTGAGGGACAAGTTGGATTACGTATATATACAATATTAAGCATACATTATCCAAATATTTTCTTTTTGGACGAAAACAAGAGGCAAGGGAGATCAATAGGTACATCAAGATATCTCAATTAAGTTGAATAATCACTGAATTATCCAAAATATGCTATATATAGCTAATTTTTTTGGGAATGGACGATCATCATACCTTTTTTAAATAATTGAAGTCCTTAACTTGATCCCAATTTAGAAAGTAAATTTCATTTTGAGAGTGATTTTAAAACTCTTAAAAACGACAAGTTCACACATGGACACTAAAATATACTCTTAATCATCTCAAATTAATTTTGGTCCTATAGAAACCAAAAAGTACAAAACTTAATATTAAATTCACTATAAATCATTAGAGGCATGTTTAATAGTAATTTTTTTTAATCATTTATTCATAATCTCTCTTTCACATGTCCTAAACATTGCATATTAAAAGATTCCATGAGAATTAGTAAACTATATTAATCCTATTGCGGATGCTATTACATTTCAAATTCTGGTTGACAGCCATTTTAAATTACGGATAGTATGTGCATCTTAATAGTCACACATAATGGTTAATATATATATATAGGAGCGATCTTGCATGCATAATGCAACTCTACATATTTGCCTTTTGCATGGTAATATGTTTTTCTACGTATTACATTGACCAGTTCCGTTTGAAACTTTGATCCACAGTACCGGGTGATATTAAACCAGATTGAAACGCACAAGAAGAAGGTAATTCAAGCCATATAATTTCTTTATTGAAATGTTGTTTGGGAGGTTTCGTTTGGTATCAGGTAAAAATTTGAAGTAATTGGATTACTATTTCTACGTCAGTAATACTTAAACTACGTACTAGCTGGTATTAAAAAAAGGTTTACCACAATGAAGATAGAACTATGTTGTTGGATTGCAATCTAGCTGACAGACAAGTATTACCTATCTAAATTTGTTTCTTCAAATATTGTCTGGAGTAAGTTTCACTTTAAAAACAAAAATATTTGAATGCATCTTAAACTACATTTATTACTGTGCATTATACCAAATTGTTCAATCATATTTTACAACGTGACAAATTCATTTTACTTCTTTTTCAAAATATTTTAAGTTTTCTTTTGTGTGTTTGATAAGAGTGGGATGCACAATGAAGATATGTTCGGAACGATCTTTCAAGTGATAATTTTACCTACTTAAATTCAGGATAATTGAATGGGTAGTACTTTTAGGGCTAATTATTAAGTGTATAGCAACATTTTTAAAAAATTGCAAATATAGCAAAGGGTAAGCACTTTTAAAAATAATAATTACGTATATAGTAACATTCTAAAAAATTTACAAATATAAAAAAATCTATCAATGATATACCCTATCGCTAATACGTCTCTACTAATGATATAATAAATTTCTATAAATGATATGGTATATTACAGACTTCGGAAGTAGATTTTAAATTTCATATTTGCAAATTTCTTTTGCATTATGCTATATATGCAAATACTTGACCCCGATTACTATGTTTGCAACTTTTCCTGTAGCAAAATCTATCAATAATAGATTGTATTGTTGATAGACTTCTATTAGCGATACATTCTACAACAAATAGACTACAAGAGCTTGATCTAAATTATGTTATATCTGAAATTTCATTTTGCATTGTGTTATATTTGTTAATATTTGAGCAATATATTTGGGTGCATCATGAACCGGGCAGCCCACTTCAATTACACCAGGAAAAAAAAACTAAAAAAGTAAGAATTAGTGATTTGATAATCAAGTTTTTCTATTAACATGATATTATTTTGATGTGTGAACAATGCAGTTAAAGAGCGTGGGACAAATACACAAGAGTCTACTACAGGAGTTTGTAAGTGTGATTATTATAGTTGTAAATACATGATATGCATTTAGTTAAGAAAGGAAAATAGAAATGGTTGAAAGTTTATGGTGCGTCTTTGTTATGGGAATGGCATGGCAGGATATTGCAACAGAGGAAGATCCACATTATGGGCTGGTAGACAATGGAGGAGTAGGAGTTGGAATAGGAGATTATGAGTCAATTATGGGATTCCCAGGCGGTGGACATCCTCGCATATTTGCATTGCGCCTCCAGCCCAACCACGGCCATAGCCATACCCACACCCACACCCACAACCACAACCATCCTAATATTCATGTTCATCCACCTTCAGATCTCACTACCTATCCACTACTCGAGTAG

mRNA sequence

ATGGCTCGTGGGAAGATCCAGATCAAGAGAATCGAAAACCCCACAAACAGGCAAGTCACTTACTCCAAACGACGCAACGGCCTCTTCAAAAAGGCCAACGAACTCACCGTCCTCTGCGATGCTAAAGTCTCCATTATCATGTTCTCTAGCACTGGAAAACTCCACGAGTATATCAGCCCTGCCACTTCGACCAAGGAGCTTTTCGATCAGTACCAGAAGACTTTAGGCGTTGATTTATGGATCTCTCACTATGAGAGAATGCAAGACAATCTGAAGAAGCTTAAAGATGTGAATCGAAATCTCCGCAAGCAGATTAGGCAGAGGATGGGGGAATGTATGAATGATCTGAGTTTTGAAGAACTGCGCTGTCTTGAGCAAGATATGGATAATGCTGTCAGGATCATCCGTGAACGCAAGTTAAAGAGCGTGGGACAAATACACAAGAGTCTACTACAGGAGTTTGATATTGCAACAGAGGAAGATCCACATTATGGGCTGGTAGACAATGGAGGAGTAGGAGTTGGAATAGGAGATTATGAGTCAATTATGGGATTCCCAGGCGGTGGACATCCTCGCATATTTGCATTGCGCCTCCAGCCCAACCACGGCCATAGCCATACCCACACCCACACCCACAACCACAACCATCCTAATATTCATGTTCATCCACCTTCAGATCTCACTACCTATCCACTACTCGAGTAG

Coding sequence (CDS)

ATGGCTCGTGGGAAGATCCAGATCAAGAGAATCGAAAACCCCACAAACAGGCAAGTCACTTACTCCAAACGACGCAACGGCCTCTTCAAAAAGGCCAACGAACTCACCGTCCTCTGCGATGCTAAAGTCTCCATTATCATGTTCTCTAGCACTGGAAAACTCCACGAGTATATCAGCCCTGCCACTTCGACCAAGGAGCTTTTCGATCAGTACCAGAAGACTTTAGGCGTTGATTTATGGATCTCTCACTATGAGAGAATGCAAGACAATCTGAAGAAGCTTAAAGATGTGAATCGAAATCTCCGCAAGCAGATTAGGCAGAGGATGGGGGAATGTATGAATGATCTGAGTTTTGAAGAACTGCGCTGTCTTGAGCAAGATATGGATAATGCTGTCAGGATCATCCGTGAACGCAAGTTAAAGAGCGTGGGACAAATACACAAGAGTCTACTACAGGAGTTTGATATTGCAACAGAGGAAGATCCACATTATGGGCTGGTAGACAATGGAGGAGTAGGAGTTGGAATAGGAGATTATGAGTCAATTATGGGATTCCCAGGCGGTGGACATCCTCGCATATTTGCATTGCGCCTCCAGCCCAACCACGGCCATAGCCATACCCACACCCACACCCACAACCACAACCATCCTAATATTCATGTTCATCCACCTTCAGATCTCACTACCTATCCACTACTCGAGTAG

Protein sequence

MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPATSTKELFDQYQKTLGVDLWISHYERMQDNLKKLKDVNRNLRKQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKLKSVGQIHKSLLQEFDIATEEDPHYGLVDNGGVGVGIGDYESIMGFPGGGHPRIFALRLQPNHGHSHTHTHTHNHNHPNIHVHPPSDLTTYPLLE
BLAST of Cla020805 vs. Swiss-Prot
Match: MADS1_PETHY (Floral homeotic protein PMADS 1 OS=Petunia hybrida GN=PMADS1 PE=2 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 5.9e-78
Identity = 157/248 (63.31%), Postives = 189/248 (76.21%), Query Frame = 1

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60
           MARGKIQIKRIEN TNRQVTYSKRRNGLFKKANELTVLCDAKVSIIM SSTGKLHE+ISP
Sbjct: 1   MARGKIQIKRIENQTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMISSTGKLHEFISP 60

Query: 61  ATSTKELFDQYQKTLGVDLWISHYERMQDNLKKLKDVNRNLRKQIRQRMGECMNDLSFEE 120
           + +TK+LFD YQKT+GVDLW SHYE+MQ+ L+KLK+VNRNLRK+IRQRMGE +NDL++E+
Sbjct: 61  SITTKQLFDLYQKTVGVDLWNSHYEKMQEQLRKLKEVNRNLRKEIRQRMGESLNDLNYEQ 120

Query: 121 LRCLEQDMDNAVRIIRERKLKSVG--------------QIHKSLLQEFDIATEEDPHYGL 180
           L  L +++DN++++IRERK K +G              +IH++LL EFD A +EDP YGL
Sbjct: 121 LEELMENVDNSLKLIRERKYKVIGNQIETFKKKVRNVEEIHRNLLLEFD-ARQEDP-YGL 180

Query: 181 VDNGGVGVGIGDYESIMGFPGGGHPRIFALRLQPNHGHSHTHTHTHNHNHPNIHVHPPSD 235
           V+        GDY S++GFP GGH RI ALRLQPNH       H  NH+H ++H    SD
Sbjct: 181 VEQE------GDYNSVLGFPNGGH-RILALRLQPNH-------HQPNHHH-HLHSGGGSD 231

BLAST of Cla020805 vs. Swiss-Prot
Match: DEFA_ANTMA (Floral homeotic protein DEFICIENS OS=Antirrhinum majus GN=DEFA PE=1 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 8.6e-77
Identity = 154/248 (62.10%), Postives = 182/248 (73.39%), Query Frame = 1

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60
           MARGKIQIKRIEN TNRQVTYSKRRNGLFKKA+EL+VLCDAKVSIIM SST KLHEYISP
Sbjct: 1   MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELSVLCDAKVSIIMISSTQKLHEYISP 60

Query: 61  ATSTKELFDQYQKTLGVDLWISHYERMQDNLKKLKDVNRNLRKQIRQRMGECMNDLSFEE 120
            T+TK+LFDQYQK +GVDLW SHYE+MQ++LKKL +VNRNLR++IRQRMGE +NDL +E+
Sbjct: 61  TTATKQLFDQYQKAVGVDLWSSHYEKMQEHLKKLNEVNRNLRREIRQRMGESLNDLGYEQ 120

Query: 121 LRCLEQDMDNAVRIIRERKLK--------------SVGQIHKSLLQEFDIATEEDPHYGL 180
           +  L +DMDN++++IRERK K              +V +IH++L+ EFD A  EDPH+GL
Sbjct: 121 IVNLIEDMDNSLKLIRERKYKVISNQIDTSKKKVRNVEEIHRNLVLEFD-ARREDPHFGL 180

Query: 181 VDNGGVGVGIGDYESIMGFPGGGHPRIFALRLQPNHGHSHTHTHTHNHNHPNIHVHPPSD 235
           VDN       GDY S++GFP GG PRI ALRL  NH             HP +H    SD
Sbjct: 181 VDNE------GDYNSVLGFPNGG-PRIIALRLPTNH-------------HPTLHSGGGSD 227

BLAST of Cla020805 vs. Swiss-Prot
Match: AP3_ARATH (Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3 PE=1 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 2.3e-66
Identity = 137/250 (54.80%), Postives = 171/250 (68.40%), Query Frame = 1

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60
           MARGKIQIKRIEN TNRQVTYSKRRNGLFKKA+ELTVLCDA+VSIIMFSS+ KLHEYISP
Sbjct: 1   MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISP 60

Query: 61  ATSTKELFDQYQKTLGVDLWISHYERMQDNLKKLKDVNRNLRKQIRQRMGECMNDLSFEE 120
            T+TKE+ D YQ    VD+W + YERMQ+  +KL + NRNLR QI+QR+GEC+++L  +E
Sbjct: 61  NTTTKEIVDLYQTISDVDVWATQYERMQETKRKLLETNRNLRTQIKQRLGECLDELDIQE 120

Query: 121 LRCLEQDMDNAVRIIRERKLKSVG--------------QIHKSLLQEFDIATEEDPHYGL 180
           LR LE +M+N  +++RERK KS+G               I K+L+ E ++   EDPHYGL
Sbjct: 121 LRRLEDEMENTFKLVRERKFKSLGNQIETTKKKNKSQQDIQKNLIHELELRA-EDPHYGL 180

Query: 181 VDNGGVGVGIGDYESIMGFPGGGHPRIFALRLQPNHGHSHTHTHTHNHNHPNIHVHPP-- 235
           VDNG      GDY+S++G+   G  R +ALR   N          H+H +PN  +H P  
Sbjct: 181 VDNG------GDYDSVLGYQIEG-SRAYALRFHQN----------HHHYYPNHGLHAPSA 232

BLAST of Cla020805 vs. Swiss-Prot
Match: MAD16_ORYSJ (MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica GN=MADS16 PE=1 SV=2)

HSP 1 Score: 204.5 bits (519), Expect = 1.2e-51
Identity = 112/229 (48.91%), Postives = 146/229 (63.76%), Query Frame = 1

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60
           M RGKI+IKRIEN TNRQVTYSKRR G+ KKA ELTVLCDA+V+IIMFSSTGK HE+ SP
Sbjct: 1   MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSP 60

Query: 61  ATSTKELFDQYQKTLGVDLWISHYERMQDNLKKLKDVNRNLRKQIRQRMGECMNDLSFEE 120
           +T  K +FD+YQ+ +G  LWI  YE MQ  L  LKD+NRNLR +IRQRMGE ++ L F+E
Sbjct: 61  STDIKGIFDRYQQAIGTSLWIEQYENMQRTLSHLKDINRNLRTEIRQRMGEDLDGLEFDE 120

Query: 121 LRCLEQDMDNAVRIIRER--------------KLKSVGQIHKSLLQEFDIATEEDPHYGL 180
           LR LEQ++D A++ +R R              K+K   + +++L QE  +   E+P +G 
Sbjct: 121 LRGLEQNVDAALKEVRHRKYHVITTQTETYKKKVKHSYEAYETLQQE--LGLREEPAFGF 180

Query: 181 VDNGGVGVGIGDYESIMGFPGGGHPRIFALRLQPNHGHSHTHTHTHNHN 216
           VDN G     G ++   G   G    +FA R+ P+  + H   +  NH+
Sbjct: 181 VDNTG-----GGWDG--GAGAGAAADMFAFRVVPSQPNLHGMAYGGNHD 220

BLAST of Cla020805 vs. Swiss-Prot
Match: CMB2_DIACA (MADS-box protein CMB2 OS=Dianthus caryophyllus GN=CMB2 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 3.2e-39
Identity = 77/143 (53.85%), Postives = 106/143 (74.13%), Query Frame = 1

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60
           M RGK++I++IEN TNRQVT+SKRRNG+ KKA ELTVLCDAKVS++M SST KLH Y+SP
Sbjct: 1   MGRGKLEIRKIENKTNRQVTFSKRRNGIMKKAQELTVLCDAKVSLLMISSTHKLHHYLSP 60

Query: 61  ATSTKELFDQYQKTLGVDLWISHYERMQDNLKKLKDVNRNLRKQIRQRMGECMNDLSFEE 120
             S K+++D+YQK  GVDLW   +ERMQ+  +K+ ++N  LR++I +RMG  +  L+  E
Sbjct: 61  GVSLKKMYDEYQKIEGVDLWRKQWERMQEQHRKVLELNSLLRREISRRMGGDLEGLTLVE 120

Query: 121 LRCLEQDMDNAVRIIRERKLKSV 144
           L  L+Q+M+ A+  IR +K  ++
Sbjct: 121 LSALQQEMEEAIIQIRNKKYHTI 143

BLAST of Cla020805 vs. TrEMBL
Match: Q58IJ2_CUCSA (MADS box protein OS=Cucumis sativus GN=MADS1 PE=2 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 2.8e-111
Identity = 212/252 (84.13%), Postives = 220/252 (87.30%), Query Frame = 1

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60
           MARGKIQIKRIENPTNRQVTYSKRRNGL KKANELTVLCDAKVSIIMFSSTGKLHEYISP
Sbjct: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLLKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60

Query: 61  ATSTKELFDQYQKTLGVDLWISHYERMQDNLKKLKDVNRNLRKQIRQRMGECMNDLSFEE 120
           ATSTKELFDQYQKTLGVDLWI+HYERMQDNLKKLKD+NRNLR+QIRQRMGECMNDLSFEE
Sbjct: 61  ATSTKELFDQYQKTLGVDLWITHYERMQDNLKKLKDINRNLRRQIRQRMGECMNDLSFEE 120

Query: 121 LRCLEQDMDNAVRIIRER--------------KLKSVGQIHKSLLQEFDIATEEDPHYGL 180
           LRCLEQDMD+AVRIIRER              KLKSVG+IHKSLLQEFDIATEEDPHYGL
Sbjct: 121 LRCLEQDMDSAVRIIRERKYRVISNQIETHKKKLKSVGEIHKSLLQEFDIATEEDPHYGL 180

Query: 181 VDNGGVGVGI--GDYESIMGFPGGGHPRIFALRLQPNHGHSHTHTHTHNHNHPNIHVH-- 235
           VDNGGVGVGI  GDYESIMGF G  HPRIFALRLQPN        HTHN++  NIH+H  
Sbjct: 181 VDNGGVGVGIGGGDYESIMGFSGAAHPRIFALRLQPN--------HTHNNHLNNIHLHHP 240

BLAST of Cla020805 vs. TrEMBL
Match: A0A061FCW9_THECC (Floral homeotic protein DEFICIENS isoform 1 OS=Theobroma cacao GN=TCM_034148 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 5.4e-78
Identity = 158/248 (63.71%), Postives = 192/248 (77.42%), Query Frame = 1

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60
           MARGKIQIK IEN TNRQVTYSKRRNGLFKKANELTVLCDA+ SIIMFSSTGKLHE+ISP
Sbjct: 1   MARGKIQIKLIENATNRQVTYSKRRNGLFKKANELTVLCDARASIIMFSSTGKLHEFISP 60

Query: 61  ATSTKELFDQYQKTLGVDLWISHYERMQDNLKKLKDVNRNLRKQIRQRMGECMNDLSFEE 120
           +TSTK+++DQYQK LGVDLW +HYE+MQ+ LKKLK+VNRNLRK+IRQRMG+C+ND+SFE+
Sbjct: 61  STSTKQIYDQYQKVLGVDLWTTHYEKMQEQLKKLKEVNRNLRKEIRQRMGDCLNDVSFED 120

Query: 121 LRCLEQDMDNAVRIIRER--------------KLKSVGQIHKSLLQEFDIATEEDPHYGL 180
           L+ LEQ+M+ +V++IR+R              K+++V +IH++LL E D A +EDP YGL
Sbjct: 121 LQALEQEMETSVKLIRDRKYRVISNQIDTSRKKVRNVEEIHRNLLHELD-AIKEDP-YGL 180

Query: 181 VDNGGVGVGIGDYESIMGFPGGGHPRIFALRLQPNHGHSHTHTHTHNHNHPNIHVHPPSD 235
           VDNG       DY++I+G+  GG PRIFALRLQP              NHPN+H    SD
Sbjct: 181 VDNG------VDYDTIIGYQNGG-PRIFALRLQP--------------NHPNLHSGGGSD 225

BLAST of Cla020805 vs. TrEMBL
Match: A0A0K1D9D8_CAMSI (MADS domain transcription factor AP3-like protein OS=Camellia sinensis GN=DEF PE=2 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 4.6e-77
Identity = 160/248 (64.52%), Postives = 187/248 (75.40%), Query Frame = 1

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60
           MARGKIQIKRIEN TNRQVTYSKRRNGLFKKANELTVLCDAKVSIIM SSTGKLHE+ISP
Sbjct: 1   MARGKIQIKRIENSTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMVSSTGKLHEFISP 60

Query: 61  ATSTKELFDQYQKTLGVDLWISHYERMQDNLKKLKDVNRNLRKQIRQRMGECMNDLSFEE 120
           +TSTK+++DQYQK LG+DLW SHYERMQ++LKKLKDVN+NLR +IRQRMG+C+NDLS+EE
Sbjct: 61  STSTKQMYDQYQKALGIDLWCSHYERMQEHLKKLKDVNKNLRTEIRQRMGDCLNDLSYEE 120

Query: 121 LRCLEQDMDNAVRIIRERKLK--------------SVGQIHKSLLQEFDIATEEDPHYGL 180
           L  LEQDM+++V+IIR+RK K              +V +IH++LL + + + EEDP YGL
Sbjct: 121 LCGLEQDMESSVKIIRDRKYKVLNNQIETQKKKKRNVEEIHRNLLHQVN-SKEEDPQYGL 180

Query: 181 VDNGGVGVGIGDYESIMGFPGGGHPRIFALRLQPNHGHSHTHTHTHNHNHPNIHVHPPSD 235
           VDNG       DY SI+GF  GGH  I ALRLQP              NH N+H    SD
Sbjct: 181 VDNG------VDYNSILGFSNGGH-GILALRLQP--------------NHHNLHDGAGSD 226

BLAST of Cla020805 vs. TrEMBL
Match: E1AK22_9ERIC (MADS domain transcription factor OS=Camellia japonica GN=DEF PE=2 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 4.6e-77
Identity = 160/248 (64.52%), Postives = 187/248 (75.40%), Query Frame = 1

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60
           MARGKIQIKRIEN TNRQVTYSKRRNGLFKKANELTVLCDAKVSIIM SSTGKLHE+ISP
Sbjct: 1   MARGKIQIKRIENSTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMVSSTGKLHEFISP 60

Query: 61  ATSTKELFDQYQKTLGVDLWISHYERMQDNLKKLKDVNRNLRKQIRQRMGECMNDLSFEE 120
           +TSTK+++DQYQK LG+DLW SHYERMQ++LKKLKDVN+NLR +IRQRMG+C+NDLS+EE
Sbjct: 61  STSTKQMYDQYQKALGIDLWCSHYERMQEHLKKLKDVNKNLRTEIRQRMGDCLNDLSYEE 120

Query: 121 LRCLEQDMDNAVRIIRERKLK--------------SVGQIHKSLLQEFDIATEEDPHYGL 180
           L  LEQDM+++V+IIR+RK K              +V +IH++LL + + + EEDP YGL
Sbjct: 121 LCGLEQDMESSVKIIRDRKYKVLNNQIETQKKKKRNVEEIHRNLLHQVN-SKEEDPQYGL 180

Query: 181 VDNGGVGVGIGDYESIMGFPGGGHPRIFALRLQPNHGHSHTHTHTHNHNHPNIHVHPPSD 235
           VDNG       DY SI+GF  GGH  I ALRLQP              NH N+H    SD
Sbjct: 181 VDNG------VDYNSILGFSNGGH-GILALRLQP--------------NHHNLHDGAGSD 226

BLAST of Cla020805 vs. TrEMBL
Match: A0A0C5BZA7_9ERIC (MADS domain transcription factor AP3-like protein mRNA OS=Camellia oleifera PE=2 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 1.0e-76
Identity = 161/248 (64.92%), Postives = 187/248 (75.40%), Query Frame = 1

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60
           MARGKIQIKRIEN TNRQVTYSKRRNGLFKKANELTVLCDAKVSIIM SSTGKLHE+ISP
Sbjct: 1   MARGKIQIKRIENSTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMVSSTGKLHEFISP 60

Query: 61  ATSTKELFDQYQKTLGVDLWISHYERMQDNLKKLKDVNRNLRKQIRQRMGECMNDLSFEE 120
           +TSTK+++DQYQK LG+DLW SHYERMQ++LKKLKDVN+NLR +IRQRMG+C+NDLS+EE
Sbjct: 61  STSTKQMYDQYQKALGIDLWCSHYERMQEHLKKLKDVNKNLRTEIRQRMGDCLNDLSYEE 120

Query: 121 LRCLEQDMDNAVRIIRERKLK--------------SVGQIHKSLLQEFDIATEEDPHYGL 180
           L  LEQDM+++V+IIR+RK K              +V +IH++LL + + + EEDP YGL
Sbjct: 121 LCGLEQDMESSVKIIRDRKYKVLNNQIETQKKKKRNVEEIHRNLLHQVN-SKEEDPQYGL 180

Query: 181 VDNGGVGVGIGDYESIMGFPGGGHPRIFALRLQPNHGHSHTHTHTHNHNHPNIHVHPPSD 235
           VDNG       DY SI+GF  GGH  I ALRLQPNH           HN    H    SD
Sbjct: 181 VDNG------VDYNSILGFSNGGH-GILALRLQPNH-----------HNR---HDGAGSD 226

BLAST of Cla020805 vs. NCBI nr
Match: gi|659133017|ref|XP_008466510.1| (PREDICTED: floral homeotic protein DEFICIENS [Cucumis melo])

HSP 1 Score: 411.4 bits (1056), Expect = 1.1e-111
Identity = 213/252 (84.52%), Postives = 219/252 (86.90%), Query Frame = 1

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60
           MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP
Sbjct: 27  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP 86

Query: 61  ATSTKELFDQYQKTLGVDLWISHYERMQDNLKKLKDVNRNLRKQIRQRMGECMNDLSFEE 120
           ATSTKELFDQYQKTLGVDLWISHYERMQDNLKKLKD+NRNLR+QIRQRMGECMNDLSFEE
Sbjct: 87  ATSTKELFDQYQKTLGVDLWISHYERMQDNLKKLKDINRNLRRQIRQRMGECMNDLSFEE 146

Query: 121 LRCLEQDMDNAVRIIRER--------------KLKSVGQIHKSLLQEFDIATEEDPHYGL 180
           LRCLEQDMDNAVRIIRER              KLKSVG+IHKSLLQEFDIATEEDPHYGL
Sbjct: 147 LRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKSVGEIHKSLLQEFDIATEEDPHYGL 206

Query: 181 VDNGGVGVGI--GDYESIMGFPGGGHPRIFALRLQPNHGHSHTHTHTHNHNHPNIHVH-- 235
           VDNGGVGVGI  GDYESIMGF G  HPRIFALRLQPN        H HN++  NIH+H  
Sbjct: 207 VDNGGVGVGIGGGDYESIMGFSGAAHPRIFALRLQPN--------HNHNNHLNNIHLHNP 266

BLAST of Cla020805 vs. NCBI nr
Match: gi|821595311|ref|NP_001295864.1| (floral homeotic protein DEFICIENS [Cucumis sativus])

HSP 1 Score: 409.5 bits (1051), Expect = 4.1e-111
Identity = 212/252 (84.13%), Postives = 220/252 (87.30%), Query Frame = 1

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60
           MARGKIQIKRIENPTNRQVTYSKRRNGL KKANELTVLCDAKVSIIMFSSTGKLHEYISP
Sbjct: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLLKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60

Query: 61  ATSTKELFDQYQKTLGVDLWISHYERMQDNLKKLKDVNRNLRKQIRQRMGECMNDLSFEE 120
           ATSTKELFDQYQKTLGVDLWI+HYERMQDNLKKLKD+NRNLR+QIRQRMGECMNDLSFEE
Sbjct: 61  ATSTKELFDQYQKTLGVDLWITHYERMQDNLKKLKDINRNLRRQIRQRMGECMNDLSFEE 120

Query: 121 LRCLEQDMDNAVRIIRER--------------KLKSVGQIHKSLLQEFDIATEEDPHYGL 180
           LRCLEQDMD+AVRIIRER              KLKSVG+IHKSLLQEFDIATEEDPHYGL
Sbjct: 121 LRCLEQDMDSAVRIIRERKYRVISNQIETHKKKLKSVGEIHKSLLQEFDIATEEDPHYGL 180

Query: 181 VDNGGVGVGI--GDYESIMGFPGGGHPRIFALRLQPNHGHSHTHTHTHNHNHPNIHVH-- 235
           VDNGGVGVGI  GDYESIMGF G  HPRIFALRLQPN        HTHN++  NIH+H  
Sbjct: 181 VDNGGVGVGIGGGDYESIMGFSGAAHPRIFALRLQPN--------HTHNNHLNNIHLHHP 240

BLAST of Cla020805 vs. NCBI nr
Match: gi|778686714|ref|XP_011652440.1| (PREDICTED: floral homeotic protein DEFICIENS [Cucumis sativus])

HSP 1 Score: 404.1 bits (1037), Expect = 1.7e-109
Identity = 212/258 (82.17%), Postives = 220/258 (85.27%), Query Frame = 1

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLH----- 60
           MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLH     
Sbjct: 33  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHDTEKL 92

Query: 61  -EYISPATSTKELFDQYQKTLGVDLWISHYERMQDNLKKLKDVNRNLRKQIRQRMGECMN 120
            EY +PATSTKELFDQYQKTLGVDLWI+HYERMQDNLKKLKD+NRNLR+QIRQRMGECMN
Sbjct: 93  HEYTTPATSTKELFDQYQKTLGVDLWITHYERMQDNLKKLKDINRNLRRQIRQRMGECMN 152

Query: 121 DLSFEELRCLEQDMDNAVRIIRER--------------KLKSVGQIHKSLLQEFDIATEE 180
           DLSFEELRCLEQDMDNAVRIIRER              KLKSVG+IHKSLLQEFDIATEE
Sbjct: 153 DLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKSVGEIHKSLLQEFDIATEE 212

Query: 181 DPHYGLVDNGGVGVGI--GDYESIMGFPGGGHPRIFALRLQPNHGHSHTHTHTHNHNHPN 235
           DPHYGLVDNGGVGVGI  GDYESIMGF G  HPRIFALRLQPN        HTHN++  N
Sbjct: 213 DPHYGLVDNGGVGVGIGGGDYESIMGFSGAAHPRIFALRLQPN--------HTHNNHLNN 272

BLAST of Cla020805 vs. NCBI nr
Match: gi|1009118717|ref|XP_015876005.1| (PREDICTED: floral homeotic protein DEFICIENS-like [Ziziphus jujuba])

HSP 1 Score: 299.7 bits (766), Expect = 4.5e-78
Identity = 160/248 (64.52%), Postives = 188/248 (75.81%), Query Frame = 1

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60
           MARGKIQIKRIEN TNRQVTYSKRRNGLFKKANELT+LCDAKVSI+M SSTGKLHE+ISP
Sbjct: 1   MARGKIQIKRIENTTNRQVTYSKRRNGLFKKANELTILCDAKVSILMLSSTGKLHEFISP 60

Query: 61  ATSTKELFDQYQKTLGVDLWISHYERMQDNLKKLKDVNRNLRKQIRQRMGECMNDLSFEE 120
           +T+TK+++DQYQ++ GVDLW SHYERMQ+NLKKLK+VNR+LRKQIRQRMG+C+N+LSF+E
Sbjct: 61  STTTKQIYDQYQRSEGVDLWNSHYERMQENLKKLKEVNRSLRKQIRQRMGDCLNELSFKE 120

Query: 121 LRCLEQDMDNAVRIIRER--------------KLKSVGQIHKSLLQEFDIATEEDPHYGL 180
           L  LEQDM+ AV++IRER              KLK   QI+K+LL EFD A E+DPHYGL
Sbjct: 121 LLGLEQDMEEAVKVIRERKYKVLSNQIETTNKKLKQARQINKNLLIEFD-AREDDPHYGL 180

Query: 181 VDNGGVGVGIGDYESIMGFPGGGHPRIFALRLQPNHGHSHTHTHTHNHNHPNIHVHPPSD 235
           VDN       GDYES++G+     PR+FALRLQP              N PN+H    SD
Sbjct: 181 VDNR------GDYESVIGYSTEIVPRMFALRLQP--------------NQPNLHSGTGSD 227

BLAST of Cla020805 vs. NCBI nr
Match: gi|590593824|ref|XP_007017681.1| (Floral homeotic protein DEFICIENS isoform 1 [Theobroma cacao])

HSP 1 Score: 298.9 bits (764), Expect = 7.7e-78
Identity = 158/248 (63.71%), Postives = 192/248 (77.42%), Query Frame = 1

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60
           MARGKIQIK IEN TNRQVTYSKRRNGLFKKANELTVLCDA+ SIIMFSSTGKLHE+ISP
Sbjct: 1   MARGKIQIKLIENATNRQVTYSKRRNGLFKKANELTVLCDARASIIMFSSTGKLHEFISP 60

Query: 61  ATSTKELFDQYQKTLGVDLWISHYERMQDNLKKLKDVNRNLRKQIRQRMGECMNDLSFEE 120
           +TSTK+++DQYQK LGVDLW +HYE+MQ+ LKKLK+VNRNLRK+IRQRMG+C+ND+SFE+
Sbjct: 61  STSTKQIYDQYQKVLGVDLWTTHYEKMQEQLKKLKEVNRNLRKEIRQRMGDCLNDVSFED 120

Query: 121 LRCLEQDMDNAVRIIRER--------------KLKSVGQIHKSLLQEFDIATEEDPHYGL 180
           L+ LEQ+M+ +V++IR+R              K+++V +IH++LL E D A +EDP YGL
Sbjct: 121 LQALEQEMETSVKLIRDRKYRVISNQIDTSRKKVRNVEEIHRNLLHELD-AIKEDP-YGL 180

Query: 181 VDNGGVGVGIGDYESIMGFPGGGHPRIFALRLQPNHGHSHTHTHTHNHNHPNIHVHPPSD 235
           VDNG       DY++I+G+  GG PRIFALRLQP              NHPN+H    SD
Sbjct: 181 VDNG------VDYDTIIGYQNGG-PRIFALRLQP--------------NHPNLHSGGGSD 225

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
MADS1_PETHY5.9e-7863.31Floral homeotic protein PMADS 1 OS=Petunia hybrida GN=PMADS1 PE=2 SV=1[more]
DEFA_ANTMA8.6e-7762.10Floral homeotic protein DEFICIENS OS=Antirrhinum majus GN=DEFA PE=1 SV=1[more]
AP3_ARATH2.3e-6654.80Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3 PE=1 SV=1[more]
MAD16_ORYSJ1.2e-5148.91MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica GN=MADS16 PE=1 ... [more]
CMB2_DIACA3.2e-3953.85MADS-box protein CMB2 OS=Dianthus caryophyllus GN=CMB2 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
Q58IJ2_CUCSA2.8e-11184.13MADS box protein OS=Cucumis sativus GN=MADS1 PE=2 SV=1[more]
A0A061FCW9_THECC5.4e-7863.71Floral homeotic protein DEFICIENS isoform 1 OS=Theobroma cacao GN=TCM_034148 PE=... [more]
A0A0K1D9D8_CAMSI4.6e-7764.52MADS domain transcription factor AP3-like protein OS=Camellia sinensis GN=DEF PE... [more]
E1AK22_9ERIC4.6e-7764.52MADS domain transcription factor OS=Camellia japonica GN=DEF PE=2 SV=1[more]
A0A0C5BZA7_9ERIC1.0e-7664.92MADS domain transcription factor AP3-like protein mRNA OS=Camellia oleifera PE=2... [more]
Match NameE-valueIdentityDescription
gi|659133017|ref|XP_008466510.1|1.1e-11184.52PREDICTED: floral homeotic protein DEFICIENS [Cucumis melo][more]
gi|821595311|ref|NP_001295864.1|4.1e-11184.13floral homeotic protein DEFICIENS [Cucumis sativus][more]
gi|778686714|ref|XP_011652440.1|1.7e-10982.17PREDICTED: floral homeotic protein DEFICIENS [Cucumis sativus][more]
gi|1009118717|ref|XP_015876005.1|4.5e-7864.52PREDICTED: floral homeotic protein DEFICIENS-like [Ziziphus jujuba][more]
gi|590593824|ref|XP_007017681.1|7.7e-7863.71Floral homeotic protein DEFICIENS isoform 1 [Theobroma cacao][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002100TF_MADSbox
IPR002487TF_Kbox
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0046983protein dimerization activity
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048507 meristem development
biological_process GO:0010093 specification of floral organ identity
biological_process GO:0000165 MAPK cascade
biological_process GO:0045944 positive regulation of transcription from RNA polymerase II promoter
biological_process GO:0048441 petal development
biological_process GO:0048443 stamen development
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009909 regulation of flower development
biological_process GO:0009860 pollen tube growth
biological_process GO:0009827 plant-type cell wall modification
biological_process GO:0048481 plant ovule development
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU14596watermelon EST collection version 2.0transcribed_cluster
WMU76669watermelon EST collection version 2.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla020805Cla020805.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU14596WMU14596transcribed_cluster
WMU76669WMU76669transcribed_cluster


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 38..59
score: 7.0E-29coord: 3..23
score: 7.0E-29coord: 23..38
score: 7.0
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 10..57
score: 1.3
IPR002100Transcription factor, MADS-boxSMARTSM00432madsneu2coord: 1..60
score: 2.7
IPR002100Transcription factor, MADS-boxPROSITEPS00350MADS_BOX_1coord: 3..57
scor
IPR002100Transcription factor, MADS-boxPROFILEPS50066MADS_BOX_2coord: 1..61
score: 32
IPR002100Transcription factor, MADS-boxunknownSSF55455SRF-likecoord: 3..95
score: 2.09
IPR002487Transcription factor, K-boxPFAMPF01486K-boxcoord: 82..143
score: 4.8
IPR002487Transcription factor, K-boxPROFILEPS51297K_BOXcoord: 84..180
score: 11
NoneNo IPR availableunknownCoilCoilcoord: 84..111
scor
NoneNo IPR availablePANTHERPTHR11945MADS BOX PROTEINcoord: 2..202
score: 6.3E
NoneNo IPR availablePANTHERPTHR11945:SF219FLORAL HOMEOTIC PROTEIN APETALA 3coord: 2..202
score: 6.3E

The following gene(s) are paralogous to this gene:

None