Cp4.1LG06g00970 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG06g00970
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionMADS-box transcription factor
LocationCp4.1LG06 : 415818 .. 418298 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGTTGGGTTGGATGAAATAGGAAAAAAGGAAGAGGAAGGGCGGTGAATTGAGAGGACGGAAAGTGTTGGTCCCCACTTGGTGCAGAGTTATGGAGGAAAAGCAGAACAAAGACATTACGAGGTTTATTGTAAAACCTGCAAGTGCTTTCACCAAATTAGGCCCAAACTTTCCATTTCCGGCAATGCCTTCATAATTTACTTTCCATCTCCCTTCTTCTCCTCCTCCTCCTCCATTTCTCCCTCTTCCACAAATCAAACCAAAACAAAACCCTCGAAGAATTAGAACAAGAATCGAAAGGCCTCCTCCGATGGCGCGAGGGAAGATCCAGATCAAGCGAATCGAAAACCCTACGAACAGGCAGGTCACCTACTCCAAGCGACGCAACGGCCTCTTCAAAAAGGCCAACGAGCTCACCGTCCTCTGCGATGCCAAAGTCTCCATCATCATGTTTTCCAGCACTGGAAAACTCCACGAGTATATCAGCCCTTCCACCTCGTAACTAACCTCTCCTCCTCCTTCTCTCAAACCCTAAATCCCTCCTTTATTCTTTCAATTCATTTCCCTTCCTTCCAGGACCAAGGAGCTTTTCGATCAGTACCAGAAGACTCTAGGCGTTGATCTATGGATCTCTCACTACCAGGTCTCCCACTCCCCCCCTTCTTTTCTTCTCTCATCACTCTTCTATATACCCTATCAATTCGGCCATGTGCAGAGAATGCAAGAGAATCTGAAGAAGCTCAAAGACGTGAATCGTAGCCTTCGCAGGCAGATTATGTATACATCCATCCAGATCTCCATTTTTAATTTCTTCCTTTTTTCTTTTTAATGACTTTAAATACATTTATAAATACATTTACAGGCAAAGGATGGGGGAATGCATGAATGATCTGAGTTTTGAGGAACTGCGCTGTCTTGAGCAAGATATGGATAATGCCGTCAGGATCATCCGTGAACGCAAGGTTCCACAAATCCATTACTTTCATTTTAATAATATATTAATAACCTCGATTCTATTACAACTATGTTTCTAACCTCAAATCACTAGTTTGTCTTGGGACTTGGGATTCTTTTTATATAATATATTAATGCTTGATTCATTAATAAATTACCCTTATTTTGTCCTCATTCTTAATGTTATTTTTGTCGCATTTAAGAAAACACTTCAATCTAGTTTAAAATCAAATATTAGTTCATATTTGCATGTTTTGTATGTATACATTGACCAATGTGAATTTGAAACATGGTTGAACAGTACCGGGTGATATCAAACCAGATTGAAACGCACAAGAAGAAGGTAATTCAACTCGTGTAATTTACTCATTTTTGGAATATTTAGAAAAACACTTGATGATAATGATAGTGCTTGTTTTGAAACTGCAGTTGAAGAGCGTAGGAGAAATACACAAGAGTCTTCTTCAGGAGTTTGTAAGTGTGATTAATGTAGTTGGAATTCGAAGAAAATGGAAATGGTTGAAAGTTTGATAAATGTTTGGGAATGGCAAATATTTGGTACAGGATATTGCAACAGAGGAAGATCCACATTATGGGCTGGTGGACAATGGAGGTGTCGGAGTCGGAGTAGGAGTCGGAGTAGGAGTAGGCGTAGGAGTAGGCGGAGGAGATTATGAGTCAGTTATGGGGTACCACCCAGGCGGTGCCCATCCTCGCATATTCGCCTTGCGCCTCCAGCCCAACCACCCCAATATTCACCTTCAACACCCTCCCCCTCCGGATCTCACTACCTATCCACTCCTTGAGNTTTTTTTTTTTTTTTTTTCTTCTTTTTTGCCCCATAATTTGGTGAACCTATTAGGGTCTTCCACTATATTGACTGCTAAAACCCATAAAAACAACTCATATCTACGTGTTTTTTTCCCCTTTTTAATCTGTTCACTGACGAAAGGAGATTATGAATGGTTTTTATATCATGGGACTTCTTTTTTCTGTGTAAGTTTGTGATGAGTAATGAGATCGCAGGGTTAAATGGAGACACACAGCACACTGTCTCTCTTACTTCCGCCAGCGAAGGTATTAAATTTCTCAACTTTTCTAACCCTAAACTCATTCATGTTTCTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATGTTGGTATGATCCATGTAAACATGTCACAAATTGATTTCATTCATGTCTTAAATTTTTAATATTGTTGGTTTAGAAAGATATTGAATGTAGAAATGGGAAAGAATTTGAGGGGTGAGGATCCAATGAACCCTCTAAAAATTTGGTTTTAATATTGTTAATTCATGTCGCAACTAAAATGTTTTATGATTAAATGGTAAAATTTAGAAATTTTAGCATTTTGCAACTAGATTAAAACATACATTTTTTTAGTAAGACGATGAAATTTTGAATTTGTCAACCCATGGAGAGTTTTTCATCATTAATCACCCAAATCTTACCAAATTTGCAGATAA

mRNA sequence

TGGTTGGGTTGGATGAAATAGGAAAAAAGGAAGAGGAAGGGCGGTGAATTGAGAGGACGGAAAGTGTTGGTCCCCACTTGGTGCAGAGTTATGGAGGAAAAGCAGAACAAAGACATTACGAGGTTTATTGTAAAACCTGCAAGTGCTTTCACCAAATTAGGCCCAAACTTTCCATTTCCGGCAATGCCTTCATAATTTACTTTCCATCTCCCTTCTTCTCCTCCTCCTCCTCCATTTCTCCCTCTTCCACAAATCAAACCAAAACAAAACCCTCGAAGAATTAGAACAAGAATCGAAAGGCCTCCTCCGATGGCGCGAGGGAAGATCCAGATCAAGCGAATCGAAAACCCTACGAACAGGCAGGTCACCTACTCCAAGCGACGCAACGGCCTCTTCAAAAAGGCCAACGAGCTCACCGTCCTCTGCGATGCCAAAGTCTCCATCATCATGTTTTCCAGCACTGGAAAACTCCACGAGTATATCAGCCCTTCCACCTCGACCAAGGAGCTTTTCGATCAGTACCAGAAGACTCTAGGCGTTGATCTATGGATCTCTCACTACCAGGTCTCCCACTCCCCCCCTTCTTTTCTTCTCTCATCACTCTTCTATATACCCTATCAATTCGGCCATGTGCAGAGAATGCAAGAGAATCTGAAGAAGCTCAAAGACGTGAATCGTAGCCTTCGCAGGCAGATTATGCAAAGGATGGGGGAATGCATGAATGATCTGAGTTTTGAGGAACTGCGCTGTCTTGAGCAAGATATGGATAATGCCGTCAGGATCATCCGTGAACGCAAGTACCGGGTGATATCAAACCAGATTGAAACGCACAAGAAGAAGTTGAAGAGCGTAGGAGAAATACACAAGAGTCTTCTTCAGGAGTTTGATATTGCAACAGAGGAAGATCCACATTATGGGCTGGTGGACAATGGAGGTGTCGGAGTCGGAGTAGGAGTCGGAGTAGGAGTAGGCGTAGGAGTAGGCGGAGGAGATTATGAGTCAGTTATGGGATAA

Coding sequence (CDS)

ATGGCGCGAGGGAAGATCCAGATCAAGCGAATCGAAAACCCTACGAACAGGCAGGTCACCTACTCCAAGCGACGCAACGGCCTCTTCAAAAAGGCCAACGAGCTCACCGTCCTCTGCGATGCCAAAGTCTCCATCATCATGTTTTCCAGCACTGGAAAACTCCACGAGTATATCAGCCCTTCCACCTCGACCAAGGAGCTTTTCGATCAGTACCAGAAGACTCTAGGCGTTGATCTATGGATCTCTCACTACCAGGTCTCCCACTCCCCCCCTTCTTTTCTTCTCTCATCACTCTTCTATATACCCTATCAATTCGGCCATGTGCAGAGAATGCAAGAGAATCTGAAGAAGCTCAAAGACGTGAATCGTAGCCTTCGCAGGCAGATTATGCAAAGGATGGGGGAATGCATGAATGATCTGAGTTTTGAGGAACTGCGCTGTCTTGAGCAAGATATGGATAATGCCGTCAGGATCATCCGTGAACGCAAGTACCGGGTGATATCAAACCAGATTGAAACGCACAAGAAGAAGTTGAAGAGCGTAGGAGAAATACACAAGAGTCTTCTTCAGGAGTTTGATATTGCAACAGAGGAAGATCCACATTATGGGCTGGTGGACAATGGAGGTGTCGGAGTCGGAGTAGGAGTCGGAGTAGGAGTAGGCGTAGGAGTAGGCGGAGGAGATTATGAGTCAGTTATGGGATAA

Protein sequence

MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPSTSTKELFDQYQKTLGVDLWISHYQVSHSPPSFLLSSLFYIPYQFGHVQRMQENLKKLKDVNRSLRRQIMQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGVGVGVGVGVGVGVGVGGGDYESVMG
Homology
[Close]
BLAST of Cp4.1LG06g00970 vs. Swiss-Prot
Match: DEFA_ANTMA (Floral homeotic protein DEFICIENS OS=Antirrhinum majus GN=DEFA PE=1 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 7.3e-68
Identity = 136/209 (65.07%), Postives = 166/209 (79.43%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60
           MARGKIQIKRIEN TNRQVTYSKRRNGLFKKA+EL+VLCDAKVSIIM SST KLHEYISP
Sbjct: 1   MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELSVLCDAKVSIIMISSTQKLHEYISP 60

Query: 61  STSTKELFDQYQKTLGVDLWISHYQVSHSPPSFLLSSLFYIPYQFGHVQRMQENLKKLKD 120
           +T+TK+LFDQYQK +GVDLW SHY                        ++MQE+LKKL +
Sbjct: 61  TTATKQLFDQYQKAVGVDLWSSHY------------------------EKMQEHLKKLNE 120

Query: 121 VNRSLRRQIMQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKS 180
           VNR+LRR+I QRMGE +NDL +E++  L +DMDN++++IRERKY+VISNQI+T KKK+++
Sbjct: 121 VNRNLRREIRQRMGESLNDLGYEQIVNLIEDMDNSLKLIRERKYKVISNQIDTSKKKVRN 180

Query: 181 VGEIHKSLLQEFDIATEEDPHYGLVDNGG 210
           V EIH++L+ EFD A  EDPH+GLVDN G
Sbjct: 181 VEEIHRNLVLEFD-ARREDPHFGLVDNEG 184

[Close]
BLAST of Cp4.1LG06g00970 vs. Swiss-Prot
Match: MADS1_PETHY (Floral homeotic protein PMADS 1 OS=Petunia hybrida GN=PMADS1 PE=2 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.5e-65
Identity = 135/209 (64.59%), Postives = 165/209 (78.95%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60
           MARGKIQIKRIEN TNRQVTYSKRRNGLFKKANELTVLCDAKVSIIM SSTGKLHE+ISP
Sbjct: 1   MARGKIQIKRIENQTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMISSTGKLHEFISP 60

Query: 61  STSTKELFDQYQKTLGVDLWISHYQVSHSPPSFLLSSLFYIPYQFGHVQRMQENLKKLKD 120
           S +TK+LFD YQKT+GVDLW SHY                        ++MQE L+KLK+
Sbjct: 61  SITTKQLFDLYQKTVGVDLWNSHY------------------------EKMQEQLRKLKE 120

Query: 121 VNRSLRRQIMQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKS 180
           VNR+LR++I QRMGE +NDL++E+L  L +++DN++++IRERKY+VI NQIET KKK+++
Sbjct: 121 VNRNLRKEIRQRMGESLNDLNYEQLEELMENVDNSLKLIRERKYKVIGNQIETFKKKVRN 180

Query: 181 VGEIHKSLLQEFDIATEEDPHYGLVDNGG 210
           V EIH++LL EFD A +EDP YGLV+  G
Sbjct: 181 VEEIHRNLLLEFD-ARQEDP-YGLVEQEG 183

[Close]
BLAST of Cp4.1LG06g00970 vs. Swiss-Prot
Match: AP3_ARATH (Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3 PE=1 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 6.2e-59
Identity = 126/234 (53.85%), Postives = 158/234 (67.52%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60
           MARGKIQIKRIEN TNRQVTYSKRRNGLFKKA+ELTVLCDA+VSIIMFSS+ KLHEYISP
Sbjct: 1   MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISP 60

Query: 61  STSTKELFDQYQKTLGVDLWISHYQVSHSPPSFLLSSLFYIPYQFGHVQRMQENLKKLKD 120
           +T+TKE+ D YQ    VD+W + Y                        +RMQE  +KL +
Sbjct: 61  NTTTKEIVDLYQTISDVDVWATQY------------------------ERMQETKRKLLE 120

Query: 121 VNRSLRRQIMQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKS 180
            NR+LR QI QR+GEC+++L  +ELR LE +M+N  +++RERK++ + NQIET KKK KS
Sbjct: 121 TNRNLRTQIKQRLGECLDELDIQELRRLEDEMENTFKLVRERKFKSLGNQIETTKKKNKS 180

Query: 181 VGEIHKSLLQEFDIATEEDPHYGLVDNGGVGVGVGVGVGVGVGVGGGDYESVMG 235
             +I K+L+ E ++   EDPHYGLVDN                  GGDY+SV+G
Sbjct: 181 QQDIQKNLIHELELRA-EDPHYGLVDN------------------GGDYDSVLG 191

[Close]
BLAST of Cp4.1LG06g00970 vs. Swiss-Prot
Match: MAD16_ORYSJ (MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica GN=MADS16 PE=1 SV=2)

HSP 1 Score: 203.4 bits (516), Expect = 2.8e-51
Identity = 114/219 (52.05%), Postives = 144/219 (65.75%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60
           M RGKI+IKRIEN TNRQVTYSKRR G+ KKA ELTVLCDA+V+IIMFSSTGK HE+ SP
Sbjct: 1   MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSP 60

Query: 61  STSTKELFDQYQKTLGVDLWISHYQVSHSPPSFLLSSLFYIPYQFGHVQRMQENLKKLKD 120
           ST  K +FD+YQ+ +G  LWI  Y                        + MQ  L  LKD
Sbjct: 61  STDIKGIFDRYQQAIGTSLWIEQY------------------------ENMQRTLSHLKD 120

Query: 121 VNRSLRRQIMQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKS 180
           +NR+LR +I QRMGE ++ L F+ELR LEQ++D A++ +R RKY VI+ Q ET+KKK+K 
Sbjct: 121 INRNLRTEIRQRMGEDLDGLEFDELRGLEQNVDAALKEVRHRKYHVITTQTETYKKKVKH 180

Query: 181 VGEIHKSLLQEFDIATEEDPHYGLVDNGGVGVGVGVGVG 220
             E +++L QE  +   E+P +G VDN G G   G G G
Sbjct: 181 SYEAYETLQQE--LGLREEPAFGFVDNTGGGWDGGAGAG 193

[Close]
BLAST of Cp4.1LG06g00970 vs. Swiss-Prot
Match: CMB2_DIACA (MADS-box protein CMB2 OS=Dianthus caryophyllus GN=CMB2 PE=2 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 9.9e-41
Identity = 90/193 (46.63%), Postives = 124/193 (64.25%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60
           M RGK++I++IEN TNRQVT+SKRRNG+ KKA ELTVLCDAKVS++M SST KLH Y+SP
Sbjct: 1   MGRGKLEIRKIENKTNRQVTFSKRRNGIMKKAQELTVLCDAKVSLLMISSTHKLHHYLSP 60

Query: 61  STSTKELFDQYQKTLGVDLWISHYQVSHSPPSFLLSSLFYIPYQFGHVQRMQENLKKLKD 120
             S K+++D+YQK  GVDLW   +                        +RMQE  +K+ +
Sbjct: 61  GVSLKKMYDEYQKIEGVDLWRKQW------------------------ERMQEQHRKVLE 120

Query: 121 VNRSLRRQIMQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKS 180
           +N  LRR+I +RMG  +  L+  EL  L+Q+M+ A+  IR +KY  I NQ  T +KK+K+
Sbjct: 121 LNSLLRREISRRMGGDLEGLTLVELSALQQEMEEAIIQIRNKKYHTIKNQTGTTRKKIKN 169

Query: 181 VGEIHKSLLQEFD 194
           + E H  L+ E +
Sbjct: 181 LEERHTDLVMELE 169

[Close]
BLAST of Cp4.1LG06g00970 vs. TrEMBL
Match: Q58IJ2_CUCSA (MADS box protein OS=Cucumis sativus GN=MADS1 PE=2 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 6.3e-95
Identity = 189/234 (80.77%), Postives = 198/234 (84.62%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60
           MARGKIQIKRIENPTNRQVTYSKRRNGL KKANELTVLCDAKVSIIMFSSTGKLHEYISP
Sbjct: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLLKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60

Query: 61  STSTKELFDQYQKTLGVDLWISHYQVSHSPPSFLLSSLFYIPYQFGHVQRMQENLKKLKD 120
           +TSTKELFDQYQKTLGVDLWI+HY+                        RMQ+NLKKLKD
Sbjct: 61  ATSTKELFDQYQKTLGVDLWITHYE------------------------RMQDNLKKLKD 120

Query: 121 VNRSLRRQIMQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKS 180
           +NR+LRRQI QRMGECMNDLSFEELRCLEQDMD+AVRIIRERKYRVISNQIETHKKKLKS
Sbjct: 121 INRNLRRQIRQRMGECMNDLSFEELRCLEQDMDSAVRIIRERKYRVISNQIETHKKKLKS 180

Query: 181 VGEIHKSLLQEFDIATEEDPHYGLVDNGGVGVGVGVGVGVGVGVGGGDYESVMG 235
           VGEIHKSLLQEFDIATEEDPHYGLVDNGG          VGVG+GGGDYES+MG
Sbjct: 181 VGEIHKSLLQEFDIATEEDPHYGLVDNGG----------VGVGIGGGDYESIMG 200

[Close]
BLAST of Cp4.1LG06g00970 vs. TrEMBL
Match: A0A0A0LGG1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G865440 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 9.5e-75
Identity = 158/213 (74.18%), Postives = 165/213 (77.46%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAK------------------ 60
           MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAK                  
Sbjct: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKHWKTSRVFKKANELTVLC 60

Query: 61  ---VSIIMFSSTGKLHEYISPSTSTKELFDQYQKTLGVDLWISHYQVSHSPPSFLLSSLF 120
              VSIIMFSST KLHEY +P+TSTKELFDQYQKTLGVDLWI+HY+              
Sbjct: 61  DAKVSIIMFSSTEKLHEYTTPATSTKELFDQYQKTLGVDLWITHYE-------------- 120

Query: 121 YIPYQFGHVQRMQENLKKLKDVNRSLRRQIMQRMGECMNDLSFEELRCLEQDMDNAVRII 180
                     RMQ+NLKKLKD+NR+LRRQI QRMGECMNDLSFEELRCLEQDMDNAVRII
Sbjct: 121 ----------RMQDNLKKLKDINRNLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRII 180

Query: 181 RERKYRVISNQIETHKKKLKSVGEIHKSLLQEF 193
           RERKYRVISNQIETHKKKLKSVGEIHKSLLQEF
Sbjct: 181 RERKYRVISNQIETHKKKLKSVGEIHKSLLQEF 189

[Close]
BLAST of Cp4.1LG06g00970 vs. TrEMBL
Match: M4IUD6_CORKO (Apetala 3 OS=Cornus kousa GN=AP3 PE=2 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.7e-71
Identity = 150/234 (64.10%), Postives = 176/234 (75.21%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60
           MARGKIQIKRIEN TNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHE+ISP
Sbjct: 1   MARGKIQIKRIENSTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEFISP 60

Query: 61  STSTKELFDQYQKTLGVDLWISHYQVSHSPPSFLLSSLFYIPYQFGHVQRMQENLKKLKD 120
           ST+TK+LFDQYQKTLG+DLW SHY+                        RMQENLKKLK+
Sbjct: 61  STTTKQLFDQYQKTLGIDLWSSHYE------------------------RMQENLKKLKE 120

Query: 121 VNRSLRRQIMQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKS 180
           +NR  RR+I QR GE +NDLS+E+L  L++DM+ +++IIR+RKY+VI NQIET+KKKL++
Sbjct: 121 INRKFRREIRQRTGESLNDLSYEDLLRLQEDMEISLKIIRDRKYKVIGNQIETYKKKLRN 180

Query: 181 VGEIHKSLLQEFDIATEEDPHYGLVDNGGVGVGVGVGVGVGVGVGGGDYESVMG 235
           V EIH++LL EFDI   EDPHYGLVDN                  GGDY+SV+G
Sbjct: 181 VEEIHRNLLHEFDI-KGEDPHYGLVDN------------------GGDYDSVLG 191

[Close]
BLAST of Cp4.1LG06g00970 vs. TrEMBL
Match: M4IUD9_CORFO (Apetala 3 OS=Cornus florida GN=AP3 PE=2 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 3.7e-71
Identity = 149/234 (63.68%), Postives = 176/234 (75.21%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60
           MARGKIQIKRIEN TNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHE+ISP
Sbjct: 1   MARGKIQIKRIENSTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEFISP 60

Query: 61  STSTKELFDQYQKTLGVDLWISHYQVSHSPPSFLLSSLFYIPYQFGHVQRMQENLKKLKD 120
           ST+TK+LFDQYQKTLG+DLW SHY                        +RMQENLKKLKD
Sbjct: 61  STTTKQLFDQYQKTLGIDLWSSHY------------------------ERMQENLKKLKD 120

Query: 121 VNRSLRRQIMQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKS 180
           +NR LRR+I QR GE +NDLS+E+L  L++DM+ +++IIR+RKY+VI NQIET+KKK+++
Sbjct: 121 INRKLRREIRQRTGESLNDLSYEDLLRLQEDMEISLKIIRDRKYKVIGNQIETYKKKVRN 180

Query: 181 VGEIHKSLLQEFDIATEEDPHYGLVDNGGVGVGVGVGVGVGVGVGGGDYESVMG 235
           V EIH++LL EF+    EDPHYGLVDN                  GGDY+SV+G
Sbjct: 181 VEEIHRNLLHEFE-TKGEDPHYGLVDN------------------GGDYDSVLG 191

[Close]
BLAST of Cp4.1LG06g00970 vs. TrEMBL
Match: F4ZKM2_ACTER (AP3 OS=Actinidia eriantha PE=2 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 2.4e-70
Identity = 146/209 (69.86%), Postives = 167/209 (79.90%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60
           MARGKIQIKRIEN TNRQVTYSKRRNGLFKKANELTVLCDAKVSIIM SSTGKLHEYISP
Sbjct: 1   MARGKIQIKRIENSTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMISSTGKLHEYISP 60

Query: 61  STSTKELFDQYQKTLGVDLWISHYQVSHSPPSFLLSSLFYIPYQFGHVQRMQENLKKLKD 120
           S STK+LFDQYQKTLG+DLW SHY                        ++MQE+LKKLKD
Sbjct: 61  SVSTKQLFDQYQKTLGIDLWSSHY------------------------EKMQEHLKKLKD 120

Query: 121 VNRSLRRQIMQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKS 180
           VNR+ RR+I QRMGE +N+LS+E+LR LEQDM+ +++IIR+RKY+VI NQIET+KKKL++
Sbjct: 121 VNRNFRREIRQRMGESLNELSYEDLRGLEQDMETSLKIIRDRKYKVIGNQIETYKKKLRN 180

Query: 181 VGEIHKSLLQEFDIATEEDPHYGLVDNGG 210
           V EIH+SLL EFD A   DP YGLVDN G
Sbjct: 181 VEEIHRSLLHEFD-AIGADPTYGLVDNEG 184

[Close]
BLAST of Cp4.1LG06g00970 vs. TAIR10
Match: AT3G54340.1 (AT3G54340.1 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 228.8 bits (582), Expect = 3.5e-60
Identity = 126/234 (53.85%), Postives = 158/234 (67.52%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60
           MARGKIQIKRIEN TNRQVTYSKRRNGLFKKA+ELTVLCDA+VSIIMFSS+ KLHEYISP
Sbjct: 1   MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISP 60

Query: 61  STSTKELFDQYQKTLGVDLWISHYQVSHSPPSFLLSSLFYIPYQFGHVQRMQENLKKLKD 120
           +T+TKE+ D YQ    VD+W + Y                        +RMQE  +KL +
Sbjct: 61  NTTTKEIVDLYQTISDVDVWATQY------------------------ERMQETKRKLLE 120

Query: 121 VNRSLRRQIMQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKS 180
            NR+LR QI QR+GEC+++L  +ELR LE +M+N  +++RERK++ + NQIET KKK KS
Sbjct: 121 TNRNLRTQIKQRLGECLDELDIQELRRLEDEMENTFKLVRERKFKSLGNQIETTKKKNKS 180

Query: 181 VGEIHKSLLQEFDIATEEDPHYGLVDNGGVGVGVGVGVGVGVGVGGGDYESVMG 235
             +I K+L+ E ++   EDPHYGLVDN                  GGDY+SV+G
Sbjct: 181 QQDIQKNLIHELELRA-EDPHYGLVDN------------------GGDYDSVLG 191

[Close]
BLAST of Cp4.1LG06g00970 vs. TAIR10
Match: AT2G45660.1 (AT2G45660.1 AGAMOUS-like 20)

HSP 1 Score: 113.6 bits (283), Expect = 1.6e-25
Identity = 75/192 (39.06%), Postives = 121/192 (63.02%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60
           M RGK Q+KRIEN T+RQVT+SKRRNGL KKA EL+VLCDA+VS+I+FS  GKL+E+   
Sbjct: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEF--A 60

Query: 61  STSTKELFDQYQKTLGVDLWISHYQVSHSPPSFLLSSLFYIPYQFGHVQRMQENLKKLKD 120
           S++ ++  D+Y       L  +  +VS  P S    ++ ++ Y+  ++      +KK++ 
Sbjct: 61  SSNMQDTIDRY-------LRHTKDRVSTKPVS--EENMQHLKYEAANM------MKKIEQ 120

Query: 121 VNRSLRRQIMQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKS 180
           +  S R+ + + +G C    S EEL+ +EQ ++ +V+ IR RK +V   QIE  K+K K+
Sbjct: 121 LEASKRKLLGEGIGTC----SIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKA 171

Query: 181 VGEIHKSLLQEF 193
           +   ++ L +++
Sbjct: 181 LAAENEKLSEKW 171

[Close]
BLAST of Cp4.1LG06g00970 vs. TAIR10
Match: AT2G45650.1 (AT2G45650.1 AGAMOUS-like 6)

HSP 1 Score: 112.8 bits (281), Expect = 2.8e-25
Identity = 70/193 (36.27%), Postives = 112/193 (58.03%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60
           M RG++++KRIEN  NRQVT+SKRRNGL KKA EL+VLCDA+V++I+FSS GKL+E+   
Sbjct: 1   MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF--G 60

Query: 61  STSTKELFDQYQKTLGVDLWISHYQVSHSPPSFLLSSLFYIPYQFGHVQRMQENLKKLKD 120
           S   +   ++Y +     L       S++ P                 Q   + + KLK 
Sbjct: 61  SVGIESTIERYNRCYNCSL-------SNNKPE-------------ETTQSWCQEVTKLKS 120

Query: 121 VNRSLRRQIMQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKS 180
              SL R     +GE + ++  +EL+ LE+ ++ A+   R+RK +V+  ++E  +KK + 
Sbjct: 121 KYESLVRTNRNLLGEDLGEMGVKELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQ 171

Query: 181 VGEIHKSLLQEFD 194
           +G+I+K L  +F+
Sbjct: 181 LGDINKQLKIKFE 171

[Close]
BLAST of Cp4.1LG06g00970 vs. TAIR10
Match: AT5G60910.1 (AT5G60910.1 AGAMOUS-like 8)

HSP 1 Score: 110.9 bits (276), Expect = 1.1e-24
Identity = 73/191 (38.22%), Postives = 110/191 (57.59%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60
           M RG++Q+KRIEN  NRQVT+SKRR+GL KKA+E++VLCDA+V++I+FSS GKL EY S 
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEY-ST 60

Query: 61  STSTKELFDQYQKTLGVDLWISHYQVSHSPPSFLLSSLFYIPYQFGHVQRMQENLKKLKD 120
            +  + + ++Y + L  D  +    VS S    L  +                   KLK 
Sbjct: 61  DSCMERILERYDRYLYSDKQLVGRDVSQSENWVLEHA-------------------KLKA 120

Query: 121 VNRSLRRQIMQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKS 180
               L +     MGE ++ LS +EL+ LE  +D A++ IR RK + +   I   +KK K+
Sbjct: 121 RVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKA 171

Query: 181 VGEIHKSLLQE 192
           + + + SLL++
Sbjct: 181 LQDHNNSLLKK 171

[Close]
BLAST of Cp4.1LG06g00970 vs. TAIR10
Match: AT2G42830.2 (AT2G42830.2 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 109.8 bits (273), Expect = 2.4e-24
Identity = 63/181 (34.81%), Postives = 113/181 (62.43%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60
           + RGKI+IKRIEN TNRQVT+ KRRNGL KKA EL+VLCDA+V++++FS+ G+L+EY   
Sbjct: 16  IGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEY--A 75

Query: 61  STSTKELFDQYQKTLGVDLWISHYQVSHSPPSFLLSSLFYIPYQFGHVQRMQENLKKLKD 120
           + S +   ++Y+K     +         +PP+   ++  Y  YQ     +++  ++ +++
Sbjct: 76  NNSVRGTIERYKKACSDAV---------NPPTITEANTQY--YQ-QEASKLRRQIRDIQN 135

Query: 121 VNRSLRRQIMQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKS 180
           +NR +       +GE +  L+F+EL+ LE  ++  +  +R +K+ ++  +IE  +K++K 
Sbjct: 136 LNRHI-------LGESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKRVKE 175

Query: 181 V 182
           +
Sbjct: 196 I 175

[Close]
BLAST of Cp4.1LG06g00970 vs. NCBI nr
Match: gi|659133017|ref|XP_008466510.1| (PREDICTED: floral homeotic protein DEFICIENS [Cucumis melo])

HSP 1 Score: 360.5 bits (924), Expect = 2.2e-96
Identity = 192/234 (82.05%), Postives = 199/234 (85.04%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60
           MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP
Sbjct: 27  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP 86

Query: 61  STSTKELFDQYQKTLGVDLWISHYQVSHSPPSFLLSSLFYIPYQFGHVQRMQENLKKLKD 120
           +TSTKELFDQYQKTLGVDLWISHY+                        RMQ+NLKKLKD
Sbjct: 87  ATSTKELFDQYQKTLGVDLWISHYE------------------------RMQDNLKKLKD 146

Query: 121 VNRSLRRQIMQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKS 180
           +NR+LRRQI QRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKS
Sbjct: 147 INRNLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKS 206

Query: 181 VGEIHKSLLQEFDIATEEDPHYGLVDNGGVGVGVGVGVGVGVGVGGGDYESVMG 235
           VGEIHKSLLQEFDIATEEDPHYGLVDNGG          VGVG+GGGDYES+MG
Sbjct: 207 VGEIHKSLLQEFDIATEEDPHYGLVDNGG----------VGVGIGGGDYESIMG 226

[Close]
BLAST of Cp4.1LG06g00970 vs. NCBI nr
Match: gi|821595311|ref|NP_001295864.1| (floral homeotic protein DEFICIENS [Cucumis sativus])

HSP 1 Score: 355.1 bits (910), Expect = 9.1e-95
Identity = 189/234 (80.77%), Postives = 198/234 (84.62%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60
           MARGKIQIKRIENPTNRQVTYSKRRNGL KKANELTVLCDAKVSIIMFSSTGKLHEYISP
Sbjct: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLLKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60

Query: 61  STSTKELFDQYQKTLGVDLWISHYQVSHSPPSFLLSSLFYIPYQFGHVQRMQENLKKLKD 120
           +TSTKELFDQYQKTLGVDLWI+HY+                        RMQ+NLKKLKD
Sbjct: 61  ATSTKELFDQYQKTLGVDLWITHYE------------------------RMQDNLKKLKD 120

Query: 121 VNRSLRRQIMQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKS 180
           +NR+LRRQI QRMGECMNDLSFEELRCLEQDMD+AVRIIRERKYRVISNQIETHKKKLKS
Sbjct: 121 INRNLRRQIRQRMGECMNDLSFEELRCLEQDMDSAVRIIRERKYRVISNQIETHKKKLKS 180

Query: 181 VGEIHKSLLQEFDIATEEDPHYGLVDNGGVGVGVGVGVGVGVGVGGGDYESVMG 235
           VGEIHKSLLQEFDIATEEDPHYGLVDNGG          VGVG+GGGDYES+MG
Sbjct: 181 VGEIHKSLLQEFDIATEEDPHYGLVDNGG----------VGVGIGGGDYESIMG 200

[Close]
BLAST of Cp4.1LG06g00970 vs. NCBI nr
Match: gi|778686714|ref|XP_011652440.1| (PREDICTED: floral homeotic protein DEFICIENS [Cucumis sativus])

HSP 1 Score: 349.7 bits (896), Expect = 3.8e-93
Identity = 189/240 (78.75%), Postives = 198/240 (82.50%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLH----- 60
           MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLH     
Sbjct: 33  MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHDTEKL 92

Query: 61  -EYISPSTSTKELFDQYQKTLGVDLWISHYQVSHSPPSFLLSSLFYIPYQFGHVQRMQEN 120
            EY +P+TSTKELFDQYQKTLGVDLWI+HY+                        RMQ+N
Sbjct: 93  HEYTTPATSTKELFDQYQKTLGVDLWITHYE------------------------RMQDN 152

Query: 121 LKKLKDVNRSLRRQIMQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETH 180
           LKKLKD+NR+LRRQI QRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETH
Sbjct: 153 LKKLKDINRNLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETH 212

Query: 181 KKKLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGGVGVGVGVGVGVGVGVGGGDYESVMG 235
           KKKLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGG          VGVG+GGGDYES+MG
Sbjct: 213 KKKLKSVGEIHKSLLQEFDIATEEDPHYGLVDNGG----------VGVGIGGGDYESIMG 238

[Close]
BLAST of Cp4.1LG06g00970 vs. NCBI nr
Match: gi|700204876|gb|KGN60009.1| (hypothetical protein Csa_3G865440 [Cucumis sativus])

HSP 1 Score: 288.1 bits (736), Expect = 1.4e-74
Identity = 158/213 (74.18%), Postives = 165/213 (77.46%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAK------------------ 60
           MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAK                  
Sbjct: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKHWKTSRVFKKANELTVLC 60

Query: 61  ---VSIIMFSSTGKLHEYISPSTSTKELFDQYQKTLGVDLWISHYQVSHSPPSFLLSSLF 120
              VSIIMFSST KLHEY +P+TSTKELFDQYQKTLGVDLWI+HY+              
Sbjct: 61  DAKVSIIMFSSTEKLHEYTTPATSTKELFDQYQKTLGVDLWITHYE-------------- 120

Query: 121 YIPYQFGHVQRMQENLKKLKDVNRSLRRQIMQRMGECMNDLSFEELRCLEQDMDNAVRII 180
                     RMQ+NLKKLKD+NR+LRRQI QRMGECMNDLSFEELRCLEQDMDNAVRII
Sbjct: 121 ----------RMQDNLKKLKDINRNLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRII 180

Query: 181 RERKYRVISNQIETHKKKLKSVGEIHKSLLQEF 193
           RERKYRVISNQIETHKKKLKSVGEIHKSLLQEF
Sbjct: 181 RERKYRVISNQIETHKKKLKSVGEIHKSLLQEF 189

[Close]
BLAST of Cp4.1LG06g00970 vs. NCBI nr
Match: gi|430763350|gb|AGA61754.1| (apetala 3 [Cornus kousa])

HSP 1 Score: 277.3 bits (708), Expect = 2.4e-71
Identity = 150/234 (64.10%), Postives = 176/234 (75.21%), Query Frame = 1 

Query: 1   MARGKIQIKRIENPTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISP 60
           MARGKIQIKRIEN TNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHE+ISP
Sbjct: 1   MARGKIQIKRIENSTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEFISP 60

Query: 61  STSTKELFDQYQKTLGVDLWISHYQVSHSPPSFLLSSLFYIPYQFGHVQRMQENLKKLKD 120
           ST+TK+LFDQYQKTLG+DLW SHY+                        RMQENLKKLK+
Sbjct: 61  STTTKQLFDQYQKTLGIDLWSSHYE------------------------RMQENLKKLKE 120

Query: 121 VNRSLRRQIMQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKS 180
           +NR  RR+I QR GE +NDLS+E+L  L++DM+ +++IIR+RKY+VI NQIET+KKKL++
Sbjct: 121 INRKFRREIRQRTGESLNDLSYEDLLRLQEDMEISLKIIRDRKYKVIGNQIETYKKKLRN 180

Query: 181 VGEIHKSLLQEFDIATEEDPHYGLVDNGGVGVGVGVGVGVGVGVGGGDYESVMG 235
           V EIH++LL EFDI   EDPHYGLVDN                  GGDY+SV+G
Sbjct: 181 VEEIHRNLLHEFDI-KGEDPHYGLVDN------------------GGDYDSVLG 191

The following BLAST results are available for this feature:
BLAST of Cp4.1LG06g00970 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DEFA_ANTMA7.3e-6865.07Floral homeotic protein DEFICIENS OS=Antirrhinum majus GN=DEFA PE=1 SV=1[more]
MADS1_PETHY1.5e-6564.59Floral homeotic protein PMADS 1 OS=Petunia hybrida GN=PMADS1 PE=2 SV=1[more]
AP3_ARATH6.2e-5953.85Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3 PE=1 SV=1[more]
MAD16_ORYSJ2.8e-5152.05MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica GN=MADS16 PE=1 ... [more]
CMB2_DIACA9.9e-4146.63MADS-box protein CMB2 OS=Dianthus caryophyllus GN=CMB2 PE=2 SV=1[more]
BLAST of Cp4.1LG06g00970 vs. TrEMBL
Match NameE-valueIdentityDescription
Q58IJ2_CUCSA6.3e-9580.77MADS box protein OS=Cucumis sativus GN=MADS1 PE=2 SV=1[more]
A0A0A0LGG1_CUCSA9.5e-7574.18Uncharacterized protein OS=Cucumis sativus GN=Csa_3G865440 PE=4 SV=1[more]
M4IUD6_CORKO1.7e-7164.10Apetala 3 OS=Cornus kousa GN=AP3 PE=2 SV=1[more]
M4IUD9_CORFO3.7e-7163.68Apetala 3 OS=Cornus florida GN=AP3 PE=2 SV=1[more]
F4ZKM2_ACTER2.4e-7069.86AP3 OS=Actinidia eriantha PE=2 SV=1[more]
BLAST of Cp4.1LG06g00970 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G54340.13.5e-6053.85 K-box region and MADS-box transcription factor family protein [more]
AT2G45660.11.6e-2539.06 AGAMOUS-like 20[more]
AT2G45650.12.8e-2536.27 AGAMOUS-like 6[more]
AT5G60910.11.1e-2438.22 AGAMOUS-like 8[more]
AT2G42830.22.4e-2434.81 K-box region and MADS-box transcription factor family protein [more]
BLAST of Cp4.1LG06g00970 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659133017|ref|XP_008466510.1|2.2e-9682.05PREDICTED: floral homeotic protein DEFICIENS [Cucumis melo][more]
gi|821595311|ref|NP_001295864.1|9.1e-9580.77floral homeotic protein DEFICIENS [Cucumis sativus][more]
gi|778686714|ref|XP_011652440.1|3.8e-9378.75PREDICTED: floral homeotic protein DEFICIENS [Cucumis sativus][more]
gi|700204876|gb|KGN60009.1|1.4e-7474.18hypothetical protein Csa_3G865440 [Cucumis sativus][more]
gi|430763350|gb|AGA61754.1|2.4e-7164.10apetala 3 [Cornus kousa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0046983protein dimerization activity
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR002487TF_Kbox
IPR002100TF_MADSbox
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048507 meristem development
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0045944 positive regulation of transcription from RNA polymerase II promoter
biological_process GO:0048441 petal development
biological_process GO:0010093 specification of floral organ identity
biological_process GO:0048443 stamen development
biological_process GO:0009909 regulation of flower development
biological_process GO:0009860 pollen tube growth
biological_process GO:0009827 plant-type cell wall modification
biological_process GO:0048481 plant ovule development
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG06g00970.1Cp4.1LG06g00970.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 38..59
score: 7.0E-29coord: 3..23
score: 7.0E-29coord: 23..38
score: 7.0
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 10..57
score: 1.3
IPR002100Transcription factor, MADS-boxSMARTSM00432madsneu2coord: 1..60
score: 2.7
IPR002100Transcription factor, MADS-boxPROSITEPS00350MADS_BOX_1coord: 3..57
scor
IPR002100Transcription factor, MADS-boxPROFILEPS50066MADS_BOX_2coord: 1..61
score: 32
IPR002100Transcription factor, MADS-boxunknownSSF55455SRF-likecoord: 3..87
score: 3.01
IPR002487Transcription factor, K-boxPFAMPF01486K-boxcoord: 107..192
score: 1.6
IPR002487Transcription factor, K-boxPROFILEPS51297K_BOXcoord: 108..198
score: 15
NoneNo IPR availableunknownCoilCoilcoord: 108..128
scor
NoneNo IPR availablePANTHERPTHR11945MADS BOX PROTEINcoord: 229..234
score: 1.0E-121coord: 2..85
score: 1.0E-121coord: 106..210
score: 1.0E
NoneNo IPR availablePANTHERPTHR11945:SF219FLORAL HOMEOTIC PROTEIN APETALA 3coord: 106..210
score: 1.0E-121coord: 229..234
score: 1.0E-121coord: 2..85
score: 1.0E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG06g00970Cucsa.342790Cucumber (Gy14) v1cgycpeB0896
Cp4.1LG06g00970CmaCh09G001250Cucurbita maxima (Rimu)cmacpeB060
Cp4.1LG06g00970CmaCh01G019410Cucurbita maxima (Rimu)cmacpeB507
Cp4.1LG06g00970CmoCh01G020030Cucurbita moschata (Rifu)cmocpeB465
Cp4.1LG06g00970CmoCh09G001220Cucurbita moschata (Rifu)cmocpeB034
Cp4.1LG06g00970Cla020805Watermelon (97103) v1cpewmB765
Cp4.1LG06g00970Csa3G865440Cucumber (Chinese Long) v2cpecuB779
Cp4.1LG06g00970MELO3C003778Melon (DHL92) v3.5.1cpemeB726
Cp4.1LG06g00970ClCG05G018600Watermelon (Charleston Gray)cpewcgB700
Cp4.1LG06g00970CSPI03G43140Wild cucumber (PI 183967)cpecpiB781
Cp4.1LG06g00970Lsi04G017160Bottle gourd (USVL1VR-Ls)cpelsiB638
Cp4.1LG06g00970MELO3C003778.2Melon (DHL92) v3.6.1cpemedB859
Cp4.1LG06g00970CsaV3_3G045590Cucumber (Chinese Long) v3cpecucB0966
Cp4.1LG06g00970Bhi09G001886Wax gourdcpewgoB1001
Cp4.1LG06g00970CsGy3G040720Cucumber (Gy14) v2cgybcpeB438
Cp4.1LG06g00970Carg17172Silver-seed gourdcarcpeB1310
Cp4.1LG06g00970Carg08694Silver-seed gourdcarcpeB0154
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG06g00970Cp4.1LG02g07740Cucurbita pepo (Zucchini)cpecpeB459
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG06g00970Melon (DHL92) v3.6.1cpemedB852
Cp4.1LG06g00970Melon (DHL92) v3.6.1cpemedB875
Cp4.1LG06g00970Silver-seed gourdcarcpeB0569
Cp4.1LG06g00970Silver-seed gourdcarcpeB1365
Cp4.1LG06g00970Cucumber (Chinese Long) v3cpecucB0960
Cp4.1LG06g00970Cucumber (Chinese Long) v3cpecucB0961
Cp4.1LG06g00970Cucumber (Chinese Long) v3cpecucB0984
Cp4.1LG06g00970Wax gourdcpewgoB0982
Cp4.1LG06g00970Wax gourdcpewgoB0993
Cp4.1LG06g00970Cucurbita pepo (Zucchini)cpecpeB100
Cp4.1LG06g00970Cucurbita pepo (Zucchini)cpecpeB136
Cp4.1LG06g00970Cucurbita pepo (Zucchini)cpecpeB323
Cp4.1LG06g00970Cucurbita pepo (Zucchini)cpecpeB423
Cp4.1LG06g00970Cucurbita pepo (Zucchini)cpecpeB510
Cp4.1LG06g00970Cucurbita maxima (Rimu)cmacpeB198
Cp4.1LG06g00970Cucurbita maxima (Rimu)cmacpeB787
Cp4.1LG06g00970Cucurbita moschata (Rifu)cmocpeB172
Cp4.1LG06g00970Cucurbita moschata (Rifu)cmocpeB740
Cp4.1LG06g00970Wild cucumber (PI 183967)cpecpiB776
Cp4.1LG06g00970Cucumber (Chinese Long) v2cpecuB774
Cp4.1LG06g00970Watermelon (Charleston Gray)cpewcgB708
Cp4.1LG06g00970Watermelon (97103) v1cpewmB756
Cp4.1LG06g00970Melon (DHL92) v3.5.1cpemeB717
Cp4.1LG06g00970Cucumber (Gy14) v2cgybcpeB254