Csa3G824210 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G824210
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionEarly nodulin 55-2, putative; contains IPR008972 (Cupredoxin)
LocationChr3 : 32499988 .. 32502402 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGATGTGAGTTATAATAAATTGTTATATTTTATGGGTATCTAACCAAACTATTATTTATTGTTGAGTTAATTTACTATTTTAGTTTATTGTTATAGTTGGTGTCTCAAACATGGAGTGAGCTATAATAATCTACTTTACTAACTTTTAGTTATTGTACTAAACGATTTCTAAAAGTTTAATGTACATTTACTGTTTTTGATTCTTTTTTTCGAACTGTGAGTTTTAAATACCTCACTTTTGTTTACTAGGCTTGTGGAGAGATCTCAGCTCGAAAAATTTCATTGTTTGTTTGGGAAGAAAGGAGAAAAAGAGGATGGGAATAGGAAGAGGAGGAAGTGGTAGAATAAGATTTATCATAAGGAAGAAGATGGTAATGGTTTGTACTGGATGGTTATTGTTAATAATGGTAACAATTGGAAAGGGAGAGGAGCTTCATAAGGTGGGAAATTCACAAGGATGGACCCCTAATCAAAACTACACTCATTGGTCCTCTTCTCACCATTTCTATCTTGGTGATTGGCTTTGTAAGTTTTTCTTCATTTTCTCTCTTCTTCTTCTTCTTTTTTTCATTAAATCATGAGCAGTCCTACACTTTTTTTTTTCAGATTAATTATTAACCACCAATTCTTTAGTGTGTCTTAAAAATAAATTTATGAGGTTGATATGACTACAATAATTAATTTTCTTGTTTTAATGCAAGAGAGAGTGAGAATTTGAACTTATCATAATGTAATATGACTAACACTATTTATGTCTCATATTAAATCAATAACAATGATTGATACTATTGTACTTCTTGAGTGTTTTCTTTTAAATAATAATAAAAAAAACTAAGAAATTTAGTTTTAGTTTGATAACCTTTTAATATATGAAAACTAAGCTTAGAATTCAACACTATTTATGTACTTAATTATATAGGTCTTCTTAATTTTTGTTATTTACGTCTTGATGCAAAGATATAGTTTTCTAAAGAACATTTATTTTGTTTAATTATTTATTTATTTTTGGTTAGATTTGGTTGTAAATTCACTCAAATGGTTTCTTAGCAAAATATGAAAAAAATTGAGATATTTGAGAAAATTAAACAACATGTGAAAATTAATATATTGTCTCAAAATCTTAACATATTTTCTATTGATCCATATTCGATATATAGGGTGGAGAACGATCAAAAGATAATGCAAGTACATTAAAAATAATAAATTAAACATAAATTATTATTCTTTACCAAGTCAAGGATAAATTCATATAGAAAAAACTAATATATACCCTAACAAAAATGAAGTTATATCCATCAAAACATCAAATCTATTAGTTGATTTATAACTATTTTTACTTTGATGCAGATAAAACTGAGGTGAACATGAGTTTAAATAAAGTTATACTCTTCTGAAATACCAAACCAAAAGTGTAAAGAAAAAGTACTATTGTAATTCTCACTAAATAACTAAAGAAAAATAAGAGGAAGAGAAGATAATTAAGATGAAAATCTAAAGAAACCTTTATTATTTCTCTTTAAAGTCTTTCTCTTTCATTTCTTTCTCCCAATATCTGTCTTTTCCTCTCTCACACTCATCTCCACAAAAGTTCAATCCCAAGAAGATTTCTCAATCCCTCCCCCAAGATATTATTTTAAGTAATAATTCACTTCATCCAACCAAAAAATACATATTACGTTATAGCCGAGGTTTAAAATATTGATATTCATGAAAATATCGAGATCTTAACTTTTCTTTAAAGAAGTTAAACGAGTAAAAAACATTTTGTTATTTTCAAATATGTGGAAATACGTATCTATTATTTACGTTATATTTATTTTAGAGGCAATTTGATTCACTGTTCGATATCTAACTATGACTACATGTTGATTAGATTTTGTGTTCGACAAACGGTATTACAATGTATTGGAAGTGAACAAAAGGAGTTTCGAGGACTGCAACGAGAAGGACTTCATAAAGAACATCACAAGAGGTGGACGAGACGTGTTTCAGCTGACAGAGTTGCATCCATACTTTTTCATTGGCGGTGGCGGGTACTGCTTCCAAGGAATGAAACTCGCCGTCTACATGTCGACAGTTGATCATTCCGCCCCAGCTCCGTCGCCTGCAGGCTCTAACAAAAGTGGTGGTGCATTCCTATCAAATAATCCCACCCTTTGTTGTTCAATTTTGAATGCCCTTCTGCTTTTTGTAGCCATTTTCTTTCTCGGTGGTTAACTAAGATTGAATGGCACTGAAAGCGCCTAAATTCTCTCTTTTTGAACCTTTGTTTGATTTAGAGGCTTTGGTTTTGAATTTAGGAAGTGAATCTCTTATTCAATTTGTTTGGTTTGTTGTCTGCTTTTAAGCTTTGGCTTTATATATATATATATAGAAAAAAAACTTTGAGAAAATTTTTATGTATTTATAT

mRNA sequence

ATGATGGATGTGAGTTATAATAAATTGTTATATTTTATGGGCTTGTGGAGAGATCTCAGCTCGAAAAATTTCATTGTTTGTTTGGGAAGAAAGGAGAAAAAGAGGATGGGAATAGGAAGAGGAGGAAGTGGTAGAATAAGATTTATCATAAGGAAGAAGATGGTAATGGTTTGTACTGGATGGTTATTGTTAATAATGGTAACAATTGGAAAGGGAGAGGAGCTTCATAAGGTGGGAAATTCACAAGGATGGACCCCTAATCAAAACTACACTCATTGGTCCTCTTCTCACCATTTCTATCTTGGTGATTGGCTTTATTTTGTGTTCGACAAACGGTATTACAATGTATTGGAAGTGAACAAAAGGAGTTTCGAGGACTGCAACGAGAAGGACTTCATAAAGAACATCACAAGAGGTGGACGAGACGTGTTTCAGCTGACAGAGTTGCATCCATACTTTTTCATTGGCGGTGGCGGGTACTGCTTCCAAGGAATGAAACTCGCCGTCTACATGTCGACAGTTGATCATTCCGCCCCAGCTCCGTCGCCTGCAGGCTCTAACAAAAGTGGTGGTGCATTCCTATCAAATAATCCCACCCTTTGTTGTTCAATTTTGAATGCCCTTCTGCTTTTTGTAGCCATTTTCTTTCTCGGTGGTTAA

Coding sequence (CDS)

ATGATGGATGTGAGTTATAATAAATTGTTATATTTTATGGGCTTGTGGAGAGATCTCAGCTCGAAAAATTTCATTGTTTGTTTGGGAAGAAAGGAGAAAAAGAGGATGGGAATAGGAAGAGGAGGAAGTGGTAGAATAAGATTTATCATAAGGAAGAAGATGGTAATGGTTTGTACTGGATGGTTATTGTTAATAATGGTAACAATTGGAAAGGGAGAGGAGCTTCATAAGGTGGGAAATTCACAAGGATGGACCCCTAATCAAAACTACACTCATTGGTCCTCTTCTCACCATTTCTATCTTGGTGATTGGCTTTATTTTGTGTTCGACAAACGGTATTACAATGTATTGGAAGTGAACAAAAGGAGTTTCGAGGACTGCAACGAGAAGGACTTCATAAAGAACATCACAAGAGGTGGACGAGACGTGTTTCAGCTGACAGAGTTGCATCCATACTTTTTCATTGGCGGTGGCGGGTACTGCTTCCAAGGAATGAAACTCGCCGTCTACATGTCGACAGTTGATCATTCCGCCCCAGCTCCGTCGCCTGCAGGCTCTAACAAAAGTGGTGGTGCATTCCTATCAAATAATCCCACCCTTTGTTGTTCAATTTTGAATGCCCTTCTGCTTTTTGTAGCCATTTTCTTTCTCGGTGGTTAA

Protein sequence

MMDVSYNKLLYFMGLWRDLSSKNFIVCLGRKEKKRMGIGRGGSGRIRFIIRKKMVMVCTGWLLLIMVTIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWLYFVFDKRYYNVLEVNKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAVYMSTVDHSAPAPSPAGSNKSGGAFLSNNPTLCCSILNALLLFVAIFFLGG*
Homology
[Close]
BLAST of Csa3G824210 vs. Swiss-Prot
Match: LAML_ARATH (Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.5e-22
Identity = 52/110 (47.27%), Postives = 66/110 (60.00%), Query Frame = 1 

Query: 76  HKVGNSQGWTPNQNYTHWSSSHHFYLGDWLYFVFDKRYYNVLEVNKRSFEDCNEKDFIKN 135
           + VG ++ W PN NYT W+   HFYLGDWLYFVFD+  +N+LEVNK  +E C     I+N
Sbjct: 29  YTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVFDRNQHNILEVNKTDYEGCIADHPIRN 88

Query: 136 ITRG-GRDVFQLTELHPYFFIGGGGYCFQGMKLAVYMSTVDHSAPAPSPA 185
            TRG GRD+  L +   Y+ + G G C+ GMKL+V    V+   P P  A
Sbjct: 89  WTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSV---KVEKLPPPPKSA 135

[Close]
BLAST of Csa3G824210 vs. Swiss-Prot
Match: ENL2_ARATH (Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.3e-10
Identity = 43/124 (34.68%), Postives = 61/124 (49.19%), Query Frame = 1 

Query: 63  LLIMVTIGKGEELHKVGNSQGWTPN--QNYTHWSSSHHFYLGDWLYFVFDKRYYNVLEVN 122
           L  + TI    + + VG S  W  N  +NY  WS  + F + D LYF + K   +VLEVN
Sbjct: 19  LSTLFTISNARKFN-VGGSGAWVTNPPENYESWSGKNRFLVHDTLYFSYAKGADSVLEVN 78

Query: 123 KRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGG-GYCFQGMKLAVYMSTVDHSAP 182
           K  ++ CN K+ IK +  G  ++  L    P++FI G    C +G KL V + +    + 
Sbjct: 79  KADYDACNTKNPIKRVDDGDSEI-SLDRYGPFYFISGNEDNCKKGQKLNVVVISARIPST 138

Query: 183 APSP 184
           A SP
Sbjct: 139 AQSP 140

[Close]
BLAST of Csa3G824210 vs. Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.7e-10
Identity = 35/106 (33.02%), Postives = 56/106 (52.83%), Query Frame = 1 

Query: 75  LHKVGNSQGWTP--NQNYTHWSSSHHFYLGDWLYFVFDKRYYNVLEVNKRSFEDCNEKDF 134
           +HKVG+S GWT     +Y  W+SS+ F++GD L F ++ +++NVL+V++  F+ CN    
Sbjct: 3   VHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSP 62

Query: 135 IKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAVYMSTVDHSA 179
             + T G   +        YF  G  G+C  G K+ + +     SA
Sbjct: 63  AASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDPGSSSA 108

[Close]
BLAST of Csa3G824210 vs. TrEMBL
Match: A0A0A0LF66_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G824210 PE=4 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 1.6e-127
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 1 

Query: 1   MMDVSYNKLLYFMGLWRDLSSKNFIVCLGRKEKKRMGIGRGGSGRIRFIIRKKMVMVCTG 60
           MMDVSYNKLLYFMGLWRDLSSKNFIVCLGRKEKKRMGIGRGGSGRIRFIIRKKMVMVCTG
Sbjct: 1   MMDVSYNKLLYFMGLWRDLSSKNFIVCLGRKEKKRMGIGRGGSGRIRFIIRKKMVMVCTG 60

Query: 61  WLLLIMVTIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWLYFVFDKRYYNVLEVN 120
           WLLLIMVTIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWLYFVFDKRYYNVLEVN
Sbjct: 61  WLLLIMVTIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWLYFVFDKRYYNVLEVN 120

Query: 121 KRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAVYMSTVDHSAPA 180
           KRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAVYMSTVDHSAPA
Sbjct: 121 KRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAVYMSTVDHSAPA 180

Query: 181 PSPAGSNKSGGAFLSNNPTLCCSILNALLLFVAIFFLGG 220
           PSPAGSNKSGGAFLSNNPTLCCSILNALLLFVAIFFLGG
Sbjct: 181 PSPAGSNKSGGAFLSNNPTLCCSILNALLLFVAIFFLGG 219

[Close]
BLAST of Csa3G824210 vs. TrEMBL
Match: G7KLC9_MEDTR (Plastocyanin-like domain protein OS=Medicago truncatula GN=MTR_6g013170 PE=4 SV=2)

HSP 1 Score: 173.7 bits (439), Expect = 2.5e-40
Identity = 88/167 (52.69%), Postives = 112/167 (67.07%), Query Frame = 1 

Query: 54  MVMVCTGWLLLIMVTIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWLYFVFDKRY 113
           MV V  G L L  + +  G +LHKVG S+GW  N NYT WSS  H Y+GDWL FVFDKRY
Sbjct: 9   MVSVVLGVLSLWPMVVMGGPKLHKVGGSKGWKENVNYTTWSSQEHVYVGDWLKFVFDKRY 68

Query: 114 YNVLEVNKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAVYMST 173
           YNVLEVNK  ++ C +  FI+N+TRGGRDV QLTE   Y+FI GGGYCF GMK+AV    
Sbjct: 69  YNVLEVNKTGYDYCIDMTFIRNLTRGGRDVVQLTEAKTYYFITGGGYCFHGMKVAV--DV 128

Query: 174 VDHSAPAPSPAGSN--KSGGAFLSNNPTLCCSILNALLLFVAIFFLG 219
            +H  PAPSP+ S+  KSGG  +  +   C  I+ A +++V++  +G
Sbjct: 129 QEHPTPAPSPSLSDTAKSGGDSILPSMYTCFGIIVANVVYVSLVLVG 173

[Close]
BLAST of Csa3G824210 vs. TrEMBL
Match: W9R4J9_9ROSA (Lamin-like protein OS=Morus notabilis GN=L484_020957 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.3e-38
Identity = 78/156 (50.00%), Postives = 110/156 (70.51%), Query Frame = 1 

Query: 51  RKKMVMVCTGWLLLIMV----TIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWLY 110
           R  MV++   W+++ +V    ++     LH+VG S GW  N NYT WS+S H Y+GDWLY
Sbjct: 12  RLAMVVI---WVMMSLVGLKTSVMAKTTLHRVGGSLGWNQNINYTLWSASQHIYVGDWLY 71

Query: 111 FVFDKRYYNVLEVNKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMK 170
           F FDKRYYNVLEVNK S+E+C+++ FIKNIT+GGRDV++LTE  PY+F+ GGGYC+ GM+
Sbjct: 72  FHFDKRYYNVLEVNKTSYENCDDQSFIKNITQGGRDVYELTEARPYYFLSGGGYCYHGMR 131

Query: 171 LAVYMS--TVDHSAPAPSPAGSNKSGGAFLSNNPTL 201
           +A+++    +  + PAPSPA       + +SNN T+
Sbjct: 132 VAIFVDDRLLPATDPAPSPAPVPAQNASPMSNNSTV 164

[Close]
BLAST of Csa3G824210 vs. TrEMBL
Match: A0A061EMK9_THECC (Early nodulin-like protein 20 OS=Theobroma cacao GN=TCM_018673 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 5.1e-38
Identity = 75/150 (50.00%), Postives = 102/150 (68.00%), Query Frame = 1 

Query: 62  LLLIMVTIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWLYFVFDKRYYNVLEVNK 121
           ++ +M  +G G +LH+VG+ QGW PN NY+ W S   FY+GDWL F FDK Y+NVLEVNK
Sbjct: 12  VMFVMFEVGVG-KLHRVGDKQGWNPNVNYSEWCSHEQFYVGDWLLFNFDKHYFNVLEVNK 71

Query: 122 RSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAVYMSTVDHSAPAP 181
            S+E CN+++FI+NITRGGRDVF+LTE  PY+F+ GGGYCF GMK+ V +      APAP
Sbjct: 72  TSYETCNDQNFIQNITRGGRDVFELTEARPYYFLSGGGYCFHGMKVVVNVEIPQAPAPAP 131

Query: 182 SPAGSNKSGGAFLSNNPTLCCSILNALLLF 212
           +   S    G+++     +   +   +LLF
Sbjct: 132 AKNDSPSIAGSYMFLLIVISMPVACLVLLF 160

[Close]
BLAST of Csa3G824210 vs. TrEMBL
Match: Q2HWC7_MEDTR (Blue (Type 1) copper domain OS=Medicago truncatula GN=MtrDRAFT_AC147482g4v2 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 6.7e-38
Identity = 88/177 (49.72%), Postives = 112/177 (63.28%), Query Frame = 1 

Query: 54  MVMVCTGWLLLIMVTIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWLY------- 113
           MV V  G L L  + +  G +LHKVG S+GW  N NYT WSS  H Y+GDWL        
Sbjct: 9   MVSVVLGVLSLWPMVVMGGPKLHKVGGSKGWKENVNYTTWSSQEHVYVGDWLSRRLSGCS 68

Query: 114 ---FVFDKRYYNVLEVNKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQ 173
              FVFDKRYYNVLEVNK  ++ C +  FI+N+TRGGRDV QLTE   Y+FI GGGYCF 
Sbjct: 69  QGEFVFDKRYYNVLEVNKTGYDYCIDMTFIRNLTRGGRDVVQLTEAKTYYFITGGGYCFH 128

Query: 174 GMKLAVYMSTVDHSAPAPSPAGSN--KSGGAFLSNNPTLCCSILNALLLFVAIFFLG 219
           GMK+AV     +H  PAPSP+ S+  KSGG  +  +   C  I+ A +++V++  +G
Sbjct: 129 GMKVAV--DVQEHPTPAPSPSLSDTAKSGGDSILPSMYTCFGIIVANVVYVSLVLVG 183

[Close]
BLAST of Csa3G824210 vs. TAIR10
Match: AT2G27035.1 (AT2G27035.1 early nodulin-like protein 20)

HSP 1 Score: 123.2 bits (308), Expect = 1.9e-28
Identity = 61/151 (40.40%), Postives = 90/151 (59.60%), Query Frame = 1 

Query: 62  LLLIMVTIGKGEELHKVGNSQ-GWTPNQNYTHWSSSHHFYLGDWLYFVFDKRYYNVLEVN 121
           ++++++ +     LH+VG  +  W  + N++ W++   FY GDWLYF F++  +N+L+VN
Sbjct: 14  VMILIIVVEVESSLHRVGGGRYTWNSDVNFSDWANHQRFYSGDWLYFGFNRTRHNILQVN 73

Query: 122 KRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAVYMSTVDHSAPA 181
           K S+E C + D+I NITRGGRDVFQL E  PY+FI G GYC +GMKLA+   TV    P 
Sbjct: 74  KSSYEQCVDNDYIFNITRGGRDVFQLLEPKPYYFICGRGYCLKGMKLAI---TVLPQPPP 133

Query: 182 PSPAGSNKSGGAFLSNNPTLCCSILNALLLF 212
            +P     +    +  N     +I  A+L+F
Sbjct: 134 SAPTNFTSTTTPLIPPN-----AITAAILIF 156

[Close]
BLAST of Csa3G824210 vs. TAIR10
Match: AT5G15350.1 (AT5G15350.1 early nodulin-like protein 17)

HSP 1 Score: 107.8 bits (268), Expect = 8.4e-24
Identity = 52/110 (47.27%), Postives = 66/110 (60.00%), Query Frame = 1 

Query: 76  HKVGNSQGWTPNQNYTHWSSSHHFYLGDWLYFVFDKRYYNVLEVNKRSFEDCNEKDFIKN 135
           + VG ++ W PN NYT W+   HFYLGDWLYFVFD+  +N+LEVNK  +E C     I+N
Sbjct: 29  YTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVFDRNQHNILEVNKTDYEGCIADHPIRN 88

Query: 136 ITRG-GRDVFQLTELHPYFFIGGGGYCFQGMKLAVYMSTVDHSAPAPSPA 185
            TRG GRD+  L +   Y+ + G G C+ GMKL+V    V+   P P  A
Sbjct: 89  WTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSV---KVEKLPPPPKSA 135

[Close]
BLAST of Csa3G824210 vs. TAIR10
Match: AT4G12880.1 (AT4G12880.1 early nodulin-like protein 19)

HSP 1 Score: 105.9 bits (263), Expect = 3.2e-23
Identity = 52/107 (48.60%), Postives = 63/107 (58.88%), Query Frame = 1 

Query: 78  VGNSQGWTPNQNYTHWSSSHHFYLGDWLYFVFDKRYYNVLEVNKRSFEDCNEKDFIKNIT 137
           VG+ + W PN NYT W+   HFY+GDWLYFVF +  +N+LEVNK  +E C     I+N T
Sbjct: 31  VGDKKFWNPNINYTLWAQGKHFYVGDWLYFVFYRDQHNILEVNKADYEKCISNRPIRNYT 90

Query: 138 RG-GRDVFQLTELHPYFFIGGGGYCFQGMKLAVYMSTVDHSAPAPSP 184
           RG GRD+  L E   Y+ + G G C QGMKL V + T     P P P
Sbjct: 91  RGAGRDIVPLYETRRYYLLDGRGGCVQGMKLDVLVET-----PPPPP 132

[Close]
BLAST of Csa3G824210 vs. TAIR10
Match: AT3G01070.1 (AT3G01070.1 early nodulin-like protein 16)

HSP 1 Score: 104.8 bits (260), Expect = 7.1e-23
Identity = 55/137 (40.15%), Postives = 75/137 (54.74%), Query Frame = 1 

Query: 55  VMVCTGWLLLIMVTIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWLYFVFDKRYY 114
           V+V    L  ++       +   VG+++ W PN NYT W+   HFYL DWLYFV+++  Y
Sbjct: 6   VLVAGAVLAFLLAATNVTAKRWTVGDNKFWNPNINYTIWAQDKHFYLDDWLYFVYERNQY 65

Query: 115 NVLEVNKRSFEDCNEKDFIKNITRG-GRDVFQLTELHPYFFI-GGGGYCFQGMKLAVYMS 174
           NV+EVN+ ++  CN  + I N +RG GRD+  L     Y+ I G GG C+ GMKLAV + 
Sbjct: 66  NVIEVNETNYISCNPNNPIANWSRGAGRDLVHLNVTRHYYLISGNGGGCYGGMKLAVLV- 125

Query: 175 TVDHSAPAPSPAGSNKS 190
                 P P  A  NK+
Sbjct: 126 ---EKPPPPPAAAPNKN 138

[Close]
BLAST of Csa3G824210 vs. TAIR10
Match: AT2G26720.1 (AT2G26720.1 Cupredoxin superfamily protein)

HSP 1 Score: 76.6 bits (187), Expect = 2.1e-14
Identity = 46/137 (33.58%), Postives = 68/137 (49.64%), Query Frame = 1 

Query: 63  LLIMVT---IGKGEELHKVGNSQGWTP-NQNYTHWSSSHHFYLGDWLYFVFDKRYYNVLE 122
           LLI VT   +  G  +HKVGN++GWT    +Y  W+SS  F +GD L F ++K Y++V E
Sbjct: 13  LLIFVTLFGVAVGGTVHKVGNTKGWTMIGGDYEAWASSRVFQVGDTLVFAYNKDYHDVTE 72

Query: 123 VNKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAVYM--STVDH 182
           V    FE C     ++    G   +        +F  G  G+C +G KL +++  +++ H
Sbjct: 73  VTHNDFEMCESSKPLRRYKTGSDSISLTKPGLQHFICGVPGHCKKGQKLQIHVLPASLGH 132

Query: 183 SA-PAPSPAGSNKSGGA 193
            A P P P  S  S  +
Sbjct: 133 VAVPVPGPVRSQSSSSS 149

[Close]
BLAST of Csa3G824210 vs. NCBI nr
Match: gi|700204391|gb|KGN59524.1| (hypothetical protein Csa_3G824210 [Cucumis sativus])

HSP 1 Score: 463.4 bits (1191), Expect = 2.2e-127
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 1 

Query: 1   MMDVSYNKLLYFMGLWRDLSSKNFIVCLGRKEKKRMGIGRGGSGRIRFIIRKKMVMVCTG 60
           MMDVSYNKLLYFMGLWRDLSSKNFIVCLGRKEKKRMGIGRGGSGRIRFIIRKKMVMVCTG
Sbjct: 1   MMDVSYNKLLYFMGLWRDLSSKNFIVCLGRKEKKRMGIGRGGSGRIRFIIRKKMVMVCTG 60

Query: 61  WLLLIMVTIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWLYFVFDKRYYNVLEVN 120
           WLLLIMVTIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWLYFVFDKRYYNVLEVN
Sbjct: 61  WLLLIMVTIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWLYFVFDKRYYNVLEVN 120

Query: 121 KRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAVYMSTVDHSAPA 180
           KRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAVYMSTVDHSAPA
Sbjct: 121 KRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAVYMSTVDHSAPA 180

Query: 181 PSPAGSNKSGGAFLSNNPTLCCSILNALLLFVAIFFLGG 220
           PSPAGSNKSGGAFLSNNPTLCCSILNALLLFVAIFFLGG
Sbjct: 181 PSPAGSNKSGGAFLSNNPTLCCSILNALLLFVAIFFLGG 219

[Close]
BLAST of Csa3G824210 vs. NCBI nr
Match: gi|449437805|ref|XP_004136681.1| (PREDICTED: lamin-like protein [Cucumis sativus])

HSP 1 Score: 391.7 bits (1005), Expect = 8.3e-106
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 1 

Query: 36  MGIGRGGSGRIRFIIRKKMVMVCTGWLLLIMVTIGKGEELHKVGNSQGWTPNQNYTHWSS 95
           MGIGRGGSGRIRFIIRKKMVMVCTGWLLLIMVTIGKGEELHKVGNSQGWTPNQNYTHWSS
Sbjct: 1   MGIGRGGSGRIRFIIRKKMVMVCTGWLLLIMVTIGKGEELHKVGNSQGWTPNQNYTHWSS 60

Query: 96  SHHFYLGDWLYFVFDKRYYNVLEVNKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFI 155
           SHHFYLGDWLYFVFDKRYYNVLEVNKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFI
Sbjct: 61  SHHFYLGDWLYFVFDKRYYNVLEVNKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFI 120

Query: 156 GGGGYCFQGMKLAVYMSTVDHSAPAPSPAGSNKSGGAFLSNNPTLCCSILNALLLFVAIF 215
           GGGGYCFQGMKLAVYMSTVDHSAPAPSPAGSNKSGGAFLSNNPTLCCSILNALLLFVAIF
Sbjct: 121 GGGGYCFQGMKLAVYMSTVDHSAPAPSPAGSNKSGGAFLSNNPTLCCSILNALLLFVAIF 180

Query: 216 FLGG 220
           FLGG
Sbjct: 181 FLGG 184

[Close]
BLAST of Csa3G824210 vs. NCBI nr
Match: gi|659085321|ref|XP_008443357.1| (PREDICTED: lamin-like protein [Cucumis melo])

HSP 1 Score: 321.6 bits (823), Expect = 1.0e-84
Identity = 160/188 (85.11%), Postives = 172/188 (91.49%), Query Frame = 1 

Query: 36  MGIGR-GGSGRIRFIIRKKMVMVCTGWLLLIMVTIG-KGEELHKVGNSQGWTPNQNYTHW 95
           MG GR GGSGRIRFI  +KMVMVC GWLLL++V IG KGE LHKVGNS+GW+PNQNYTHW
Sbjct: 1   MGRGRSGGSGRIRFI--RKMVMVC-GWLLLLVVRIGIKGEVLHKVGNSEGWSPNQNYTHW 60

Query: 96  SSSHHFYLGDWLYFVFDKRYYNVLEVNKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYF 155
           S+SHHFYLGDWLYFVFDKRYYNVLEVNKRS+EDCN+KDFIKNITRGGRDVFQL+ELHPYF
Sbjct: 61  STSHHFYLGDWLYFVFDKRYYNVLEVNKRSYEDCNDKDFIKNITRGGRDVFQLSELHPYF 120

Query: 156 FIGGGGYCFQGMKLAVYMSTVDHSAPAPSPAGSNKSGG--AFLSNNPTLCCSILNALLLF 215
           FIGGGGYCFQGMKLAVY+S VD SAPAPSPA SNKSGG  +FLSNNPT CCS+LNALLLF
Sbjct: 121 FIGGGGYCFQGMKLAVYVSAVD-SAPAPSPAASNKSGGGASFLSNNPTFCCSVLNALLLF 180

Query: 216 VAIFFLGG 220
           VAIF L G
Sbjct: 181 VAIFLLRG 184

[Close]
BLAST of Csa3G824210 vs. NCBI nr
Match: gi|922348876|ref|XP_003618574.2| (plastocyanin-like domain protein [Medicago truncatula])

HSP 1 Score: 173.7 bits (439), Expect = 3.5e-40
Identity = 88/167 (52.69%), Postives = 112/167 (67.07%), Query Frame = 1 

Query: 54  MVMVCTGWLLLIMVTIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWLYFVFDKRY 113
           MV V  G L L  + +  G +LHKVG S+GW  N NYT WSS  H Y+GDWL FVFDKRY
Sbjct: 9   MVSVVLGVLSLWPMVVMGGPKLHKVGGSKGWKENVNYTTWSSQEHVYVGDWLKFVFDKRY 68

Query: 114 YNVLEVNKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAVYMST 173
           YNVLEVNK  ++ C +  FI+N+TRGGRDV QLTE   Y+FI GGGYCF GMK+AV    
Sbjct: 69  YNVLEVNKTGYDYCIDMTFIRNLTRGGRDVVQLTEAKTYYFITGGGYCFHGMKVAV--DV 128

Query: 174 VDHSAPAPSPAGSN--KSGGAFLSNNPTLCCSILNALLLFVAIFFLG 219
            +H  PAPSP+ S+  KSGG  +  +   C  I+ A +++V++  +G
Sbjct: 129 QEHPTPAPSPSLSDTAKSGGDSILPSMYTCFGIIVANVVYVSLVLVG 173

[Close]
BLAST of Csa3G824210 vs. NCBI nr
Match: gi|703073522|ref|XP_010089567.1| (Lamin-like protein [Morus notabilis])

HSP 1 Score: 167.2 bits (422), Expect = 3.3e-38
Identity = 78/156 (50.00%), Postives = 110/156 (70.51%), Query Frame = 1 

Query: 51  RKKMVMVCTGWLLLIMV----TIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWLY 110
           R  MV++   W+++ +V    ++     LH+VG S GW  N NYT WS+S H Y+GDWLY
Sbjct: 12  RLAMVVI---WVMMSLVGLKTSVMAKTTLHRVGGSLGWNQNINYTLWSASQHIYVGDWLY 71

Query: 111 FVFDKRYYNVLEVNKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMK 170
           F FDKRYYNVLEVNK S+E+C+++ FIKNIT+GGRDV++LTE  PY+F+ GGGYC+ GM+
Sbjct: 72  FHFDKRYYNVLEVNKTSYENCDDQSFIKNITQGGRDVYELTEARPYYFLSGGGYCYHGMR 131

Query: 171 LAVYMS--TVDHSAPAPSPAGSNKSGGAFLSNNPTL 201
           +A+++    +  + PAPSPA       + +SNN T+
Sbjct: 132 VAIFVDDRLLPATDPAPSPAPVPAQNASPMSNNSTV 164

The following BLAST results are available for this feature:
BLAST of Csa3G824210 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LAML_ARATH1.5e-2247.27Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1[more]
ENL2_ARATH1.3e-1034.68Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520 PE=1 SV=1[more]
MAVI_CUCPE1.7e-1033.02Mavicyanin OS=Cucurbita pepo PE=1 SV=1[more]
BLAST of Csa3G824210 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LF66_CUCSA1.6e-127100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G824210 PE=4 SV=1[more]
G7KLC9_MEDTR2.5e-4052.69Plastocyanin-like domain protein OS=Medicago truncatula GN=MTR_6g013170 PE=4 SV=... [more]
W9R4J9_9ROSA2.3e-3850.00Lamin-like protein OS=Morus notabilis GN=L484_020957 PE=4 SV=1[more]
A0A061EMK9_THECC5.1e-3850.00Early nodulin-like protein 20 OS=Theobroma cacao GN=TCM_018673 PE=4 SV=1[more]
Q2HWC7_MEDTR6.7e-3849.72Blue (Type 1) copper domain OS=Medicago truncatula GN=MtrDRAFT_AC147482g4v2 PE=4... [more]
BLAST of Csa3G824210 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G27035.11.9e-2840.40 early nodulin-like protein 20[more]
AT5G15350.18.4e-2447.27 early nodulin-like protein 17[more]
AT4G12880.13.2e-2348.60 early nodulin-like protein 19[more]
AT3G01070.17.1e-2340.15 early nodulin-like protein 16[more]
AT2G26720.12.1e-1433.58 Cupredoxin superfamily protein[more]
BLAST of Csa3G824210 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700204391|gb|KGN59524.1|2.2e-127100.00hypothetical protein Csa_3G824210 [Cucumis sativus][more]
gi|449437805|ref|XP_004136681.1|8.3e-106100.00PREDICTED: lamin-like protein [Cucumis sativus][more]
gi|659085321|ref|XP_008443357.1|1.0e-8485.11PREDICTED: lamin-like protein [Cucumis melo][more]
gi|922348876|ref|XP_003618574.2|3.5e-4052.69plastocyanin-like domain protein [Medicago truncatula][more]
gi|703073522|ref|XP_010089567.1|3.3e-3850.00Lamin-like protein [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003245Phytocyanin_dom
IPR008972Cupredoxin
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron carrier activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0022900 electron transport chain
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0009055 electron carrier activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU178015cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G824210.1Csa3G824210.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU178015CU178015transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003245Phytocyanin domainPRODOMPD003122coord: 107..184
score: 4.0
IPR003245Phytocyanin domainPFAMPF02298Cu_bind_likecoord: 84..165
score: 3.7
IPR003245Phytocyanin domainPROFILEPS51485PHYTOCYANINcoord: 74..173
score: 27
IPR008972CupredoxinGENE3DG3DSA:2.60.40.420coord: 76..171
score: 1.1
IPR008972CupredoxinunknownSSF49503Cupredoxinscoord: 75..170
score: 8.06
NoneNo IPR availablePANTHERPTHR33021FAMILY NOT NAMEDcoord: 47..188
score: 2.1
NoneNo IPR availablePANTHERPTHR33021:SF4EARLY NODULIN-LIKE PROTEIN 20coord: 47..188
score: 2.1