CsGy3G036110 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G036110
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	lamin-like protein
Location	Chr3 : 34382467 .. 34384279 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAACAATTGGAAAGGGAGAGGAGCTTCATAAGGTGGGAAATTCACAAGGATGGACCCCTAATCAAAACTACACTCATTGGTCCTCTTCTCACCATTTCTATCTTGGTGATTGGCTTTGTAAGTTTTTCTTCATTTTCTCTCTTCTTCTTCTTCTTTTTTTCATTAAATCATGAGCAGTCCTACACTTTTTTTTTTCAGATTAATTATTAACCACCAATTCTTTAGTGTGTCTTAAAAATAAATTTATGAGGTTGATATGACTACAATAATTAATTTTCTTGTTTTAATGCAAGAGAGAGTGAGAATTTGAACTTATCATAATGTAATATGACTAACACTATTTATGTCTCATATTAAATCAATAACAATGATTGATACTATTGTACTTCTTGAGTGTTTTCTTTTAAATAATAATAAAAAAAACTAAGAAATTTAGTTTTAGTTTGATAACCTTTTAATATATGAAAACTAAGCTTAGAATTCAACACTATTTATGTACTTAATTATATAGGTCTTCTTAATTTTTGTTATTTACGTCTTGATGCAAAGATATAGTTTTCTAAAGAACATTTATTTTGTTTAATTATTTATTTATTTTTGGTTAGATTTGGTTGTAAATTCACTCAAATGGTTTCTTAGCAAAATATGAAAAAAATTGAGATATTTGAGAAAATTAAACAACATGTGAAAATTAATATATTGTCTCAAAATCTTAACATATTTTCTATTGATCCATATTCGATATATAGGGTGGAGAACGATCAAAAGATAATGCAAGTACATTAAAAATAATAAATTAAACATAAATTATTATTCTTTACCAAGTCAAGGATAAATTCATATAGAAAAAACTAATATATACCCTAACAAAAATGAAGTTATATCCATCAAAACATCAAATCTATTAGTTGATTTATAACTATTTTTACTTTGATGCAGATAAAACTGAGGTGAACATGAGTTTAAATAAAGTTATACTCTTCTGAAATACCAAACCAAAAGTGTAAAGAAAAAGTACTATTGTAATTCTCACTAAATAACTAAAGAAAAATAAGAGGAAGAGAAGATAATTAAGATGAAAATCTAAAGAAACCTTTATTATTTCTCTTTAAAGTCTTTCTCTTTCATTTCTTTCTCCCAATATCTGTCTTTTCCTCTCTCACACTCATCTCCACAAAAGTTCAATCCCAAGAAGATTTCTCAATCCCTCCCCCAAGATATTATTTTAAGTAATAATTCACTTCATCCAACCAAAAAATACATATTACGTTATAGCCGAGGTTTAAAATATTGATATTCATGAAAATATCGAGATCTTAACTTTTCTTTAAAGAAGTTAAACGAGTAAAAAACATTTTGTTATTTTCAAATATGTGGAAATACGTATCTATTATTTACGTTATATTTATTTTAGAGGCAATTTGATTCACTGTTCGATATCTAACTATGACTACATGTTGATTAGATTTTGTGTTCGACAAACGGTATTACAATGTATTGGAAGTGAACAAAAGGAGTTTCGAGGACTGCAACGAGAAGGACTTCATAAAGAACATCACAAGAGGTGGACGAGACGTGTTTCAGCTGACAGAGTTGCATCCATACTTTTTCATTGGCGGTGGCGGGTACTGCTTCCAAGGAATGAAACTCGCCGTCTACATGTCGACAGTTGATCATTCCGCCCCAGCTCCGTCGCCTGCAGGCTCTAACAAAAGTGGTGGTGCATTCCTATCAAATAATCCCACCCTTTGTTGTTCAATTTTGAATGCCCTTCTGCTTTTTGTAGCCATTTTCTTTCTCGGTGGTTAA

mRNA sequence

ATGGTAACAATTGGAAAGGGAGAGGAGCTTCATAAGGTGGGAAATTCACAAGGATGGACCCCTAATCAAAACTACACTCATTGGTCCTCTTCTCACCATTTCTATCTTGGTGATTGGCTTTGTAAATTTGGTTGTAAATTCACTCAAATGGGTGGAGAACGATCAAAAGATAATGCAATGAACAAAAGGAGTTTCGAGGACTGCAACGAGAAGGACTTCATAAAGAACATCACAAGAGGTGGACGAGACGTGTTTCAGCTGACAGAGTTGCATCCATACTTTTTCATTGGCGGTGGCGGGTACTGCTTCCAAGGAATGAAACTCGCCGTCTACATGTCGACAGTTGATCATTCCGCCCCAGCTCCGTCGCCTGCAGGCTCTAACAAAAGTGGTGGTGCATTCCTATCAAATAATCCCACCCTTTGTTGTTCAATTTTGAATGCCCTTCTGCTTTTTGTAGCCATTTTCTTTCTCGGTGGTTAA

Coding sequence (CDS)

ATGGTAACAATTGGAAAGGGAGAGGAGCTTCATAAGGTGGGAAATTCACAAGGATGGACCCCTAATCAAAACTACACTCATTGGTCCTCTTCTCACCATTTCTATCTTGGTGATTGGCTTTGTAAATTTGGTTGTAAATTCACTCAAATGGGTGGAGAACGATCAAAAGATAATGCAATGAACAAAAGGAGTTTCGAGGACTGCAACGAGAAGGACTTCATAAAGAACATCACAAGAGGTGGACGAGACGTGTTTCAGCTGACAGAGTTGCATCCATACTTTTTCATTGGCGGTGGCGGGTACTGCTTCCAAGGAATGAAACTCGCCGTCTACATGTCGACAGTTGATCATTCCGCCCCAGCTCCGTCGCCTGCAGGCTCTAACAAAAGTGGTGGTGCATTCCTATCAAATAATCCCACCCTTTGTTGTTCAATTTTGAATGCCCTTCTGCTTTTTGTAGCCATTTTCTTTCTCGGTGGTTAA

Protein sequence

MVTIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWLCKFGCKFTQMGGERSKDNAMNKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAVYMSTVDHSAPAPSPAGSNKSGGAFLSNNPTLCCSILNALLLFVAIFFLGG

Homology

[Close]

BLAST of CsGy3G036110 vs. NCBI nr
Match: XP_004136681.1 (PREDICTED: lamin-like protein [Cucumis sativus])

HSP 1 Score: 287.0 bits (733), Expect = 4.1e-74
Identity = 140/160 (87.50%), Postives = 142/160 (88.75%), Query Frame = 0


Query: 1   MVTIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWLCKFGCKFTQMGGERSKDNAM 60
           MVTIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWL      +            +
Sbjct: 31  MVTIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWL------YFVFDKRYYNVLEV 90

Query: 61  NKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAVYMSTVDHSAP 120
           NKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAVYMSTVDHSAP
Sbjct: 91  NKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAVYMSTVDHSAP 150

Query: 121 APSPAGSNKSGGAFLSNNPTLCCSILNALLLFVAIFFLGG 161
           APSPAGSNKSGGAFLSNNPTLCCSILNALLLFVAIFFLGG
Sbjct: 151 APSPAGSNKSGGAFLSNNPTLCCSILNALLLFVAIFFLGG 184

[Close]

BLAST of CsGy3G036110 vs. NCBI nr
Match: KGN59524.1 (hypothetical protein Csa_3G824210 [Cucumis sativus])

HSP 1 Score: 287.0 bits (733), Expect = 4.1e-74
Identity = 140/160 (87.50%), Postives = 142/160 (88.75%), Query Frame = 0


Query: 1   MVTIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWLCKFGCKFTQMGGERSKDNAM 60
           MVTIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWL      +            +
Sbjct: 66  MVTIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWL------YFVFDKRYYNVLEV 125

Query: 61  NKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAVYMSTVDHSAP 120
           NKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAVYMSTVDHSAP
Sbjct: 126 NKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAVYMSTVDHSAP 185

Query: 121 APSPAGSNKSGGAFLSNNPTLCCSILNALLLFVAIFFLGG 161
           APSPAGSNKSGGAFLSNNPTLCCSILNALLLFVAIFFLGG
Sbjct: 186 APSPAGSNKSGGAFLSNNPTLCCSILNALLLFVAIFFLGG 219

[Close]

BLAST of CsGy3G036110 vs. NCBI nr
Match: XP_008443357.1 (PREDICTED: lamin-like protein [Cucumis melo])

HSP 1 Score: 241.1 bits (614), Expect = 2.5e-60
Identity = 122/163 (74.85%), Postives = 134/163 (82.21%), Query Frame = 0


Query: 1   MVTIG-KGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWLCKFGCKFTQMGGERSKDNA 60
           +V IG KGE LHKVGNS+GW+PNQNYTHWS+SHHFYLGDWL      +            
Sbjct: 29  VVRIGIKGEVLHKVGNSEGWSPNQNYTHWSTSHHFYLGDWL------YFVFDKRYYNVLE 88

Query: 61  MNKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAVYMSTVDHSA 120
           +NKRS+EDCN+KDFIKNITRGGRDVFQL+ELHPYFFIGGGGYCFQGMKLAVY+S VD SA
Sbjct: 89  VNKRSYEDCNDKDFIKNITRGGRDVFQLSELHPYFFIGGGGYCFQGMKLAVYVSAVD-SA 148

Query: 121 PAPSPAGSNKSGG--AFLSNNPTLCCSILNALLLFVAIFFLGG 161
           PAPSPA SNKSGG  +FLSNNPT CCS+LNALLLFVAIF L G
Sbjct: 149 PAPSPAASNKSGGGASFLSNNPTFCCSVLNALLLFVAIFLLRG 184

[Close]

BLAST of CsGy3G036110 vs. NCBI nr
Match: XP_022926318.1 (lamin-like protein [Cucurbita moschata])

HSP 1 Score: 171.4 bits (433), Expect = 2.5e-39
Identity = 92/156 (58.97%), Postives = 108/156 (69.23%), Query Frame = 0


Query: 3   TIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWLCKFGCKFTQMGGERSKDNAMNK 62
           T+  GE+LHKVGNS+GW PN NYT WSSSH FYLGDWL      +            +NK
Sbjct: 19  TLAMGEKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWL------YFVFDKRYYNVLEVNK 78

Query: 63  RSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAVYMSTVDHSAPAP 122
            S+E CNEK+FIKNITRGGRDVFQLTEL PYFFI GGGYCFQGMKLAV +      APA 
Sbjct: 79  TSYESCNEKEFIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMKLAVLVCPT-AVAPAA 138

Query: 123 SPAGSNKSGGAFLSNNPTLCCSILNALLLFVAIFFL 159
            P+ +  SG +   +NPT  C I+NAL+LFVA+F +
Sbjct: 139 PPSATPISGASL--SNPT--CWIMNALMLFVALFLV 163

[Close]

BLAST of CsGy3G036110 vs. NCBI nr
Match: XP_023530289.1 (lamin-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 167.5 bits (423), Expect = 3.6e-38
Identity = 90/155 (58.06%), Postives = 106/155 (68.39%), Query Frame = 0


Query: 4   IGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWLCKFGCKFTQMGGERSKDNAMNKR 63
           +  GE+LHKVGNS+GW PN NYT WSSSH FYLGDWL      +            +NK 
Sbjct: 20  VAMGEKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWL------YFVFDKRYYNVLEVNKT 79

Query: 64  SFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAVYMSTVDHSAPAPS 123
           S+E CNEK+FI NITRGGRDVFQLTEL PYFFI GGGYCF+GMKLAV +      APA  
Sbjct: 80  SYESCNEKEFINNITRGGRDVFQLTELRPYFFIAGGGYCFEGMKLAVLVCPT-AVAPAAP 139

Query: 124 PAGSNKSGGAFLSNNPTLCCSILNALLLFVAIFFL 159
           P+ +  SG +   +NPT  C I+NALLLFVA+F +
Sbjct: 140 PSATPISGASL--SNPT--CWIMNALLLFVALFLV 163

[Close]

BLAST of CsGy3G036110 vs. TAIR10
Match: AT2G27035.1 (early nodulin-like protein 20)

HSP 1 Score: 97.4 bits (241), Expect = 8.3e-21
Identity = 58/155 (37.42%), Postives = 83/155 (53.55%), Query Frame = 0


Query: 1   MVTIGKGEELHKVGNSQ-GWTPNQNYTHWSSSHHFYLGDWLCKFGCKFTQMGGERSKDNA 60
           ++ +     LH+VG  +  W  + N++ W++   FY GDWL          G  R++ N 
Sbjct: 18  IIVVEVESSLHRVGGGRYTWNSDVNFSDWANHQRFYSGDWL--------YFGFNRTRHNI 77

Query: 61  M--NKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAVYMSTVDH 120
           +  NK S+E C + D+I NITRGGRDVFQL E  PY+FI G GYC +GMKLA+   TV  
Sbjct: 78  LQVNKSSYEQCVDNDYIFNITRGGRDVFQLLEPKPYYFICGRGYCLKGMKLAI---TVLP 137

Query: 121 SAPAPSPAGSNKSGGAFLSNNPTLCCSILNALLLF 153
             P  +P     +    +  N     +I  A+L+F
Sbjct: 138 QPPPSAPTNFTSTTTPLIPPN-----AITAAILIF 156

[Close]

BLAST of CsGy3G036110 vs. TAIR10
Match: AT4G12880.1 (early nodulin-like protein 19)

HSP 1 Score: 74.7 bits (182), Expect = 5.7e-14
Identity = 40/99 (40.40%), Postives = 53/99 (53.54%), Query Frame = 0


Query: 13  VGNSQGWTPNQNYTHWSSSHHFYLGDWLCKFGCKFTQMGGERSKDNAMNKRSFEDCNEKD 72
           VG+ + W PN NYT W+   HFY+GDWL      +     ++     +NK  +E C    
Sbjct: 31  VGDKKFWNPNINYTLWAQGKHFYVGDWL------YFVFYRDQHNILEVNKADYEKCISNR 90

Query: 73  FIKNITRG-GRDVFQLTELHPYFFIGGGGYCFQGMKLAV 111
            I+N TRG GRD+  L E   Y+ + G G C QGMKL V
Sbjct: 91  PIRNYTRGAGRDIVPLYETRRYYLLDGRGGCVQGMKLDV 123

[Close]

BLAST of CsGy3G036110 vs. TAIR10
Match: AT3G17675.1 (Cupredoxin superfamily protein)

HSP 1 Score: 47.4 bits (111), Expect = 9.8e-06
Identity = 31/101 (30.69%), Postives = 50/101 (49.50%), Query Frame = 0


Query: 11  HKVGNSQGWTPNQNYTHWSSSHHFYLGDWLCKFGCKFTQMGGERSKDNAMNKRSFEDCNE 70
           H VG+S GW    NYT+W+    F++GD L  F  K      ++     +N  ++ DC  
Sbjct: 9   HIVGDSNGWELFTNYTNWTQGREFHVGDVLV-FNYK-----SDQHNVMQVNSTAYTDCGL 68

Query: 71  KDFIKNITRGGRDVFQLTELHPYFFI-GGGGYCFQGMKLAV 111
            ++    T+ G D   L+E+   +FI G   +C  G KL++
Sbjct: 69  DNYTTLFTK-GNDSIILSEVGKLWFICGVDDHCVNGQKLSI 102

[Close]

BLAST of CsGy3G036110 vs. TAIR10
Match: AT3G60280.1 (uclacyanin 3)

HSP 1 Score: 46.2 bits (108), Expect = 2.2e-05
Identity = 30/99 (30.30%), Postives = 46/99 (46.46%), Query Frame = 0


Query: 12  KVGNSQGWTPNQNYTHWSSSHHFYLGDWLCKFGCKFTQMGGERSKDNAMNKRSFEDCNEK 71
           KVG+  GWT N +YT W +   F +GD L     +F    G     + ++K  +++C+  
Sbjct: 25  KVGDISGWTSNLDYTVWLTGKTFRVGDTL-----EFVY--GLSHSVSVVDKAGYDNCDSS 84

Query: 72  DFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAV 111
              +N   G   +   T    +F     G+C  GMKLAV
Sbjct: 85  GATQNFADGDTKIDLTTVGTMHFLCPTFGHCKNGMKLAV 116

[Close]

BLAST of CsGy3G036110 vs. TAIR10
Match: AT2G31050.1 (Cupredoxin superfamily protein)

HSP 1 Score: 45.1 bits (105), Expect = 4.9e-05
Identity = 36/126 (28.57%), Postives = 53/126 (42.06%), Query Frame = 0


Query: 4   IGKGEELHKVGNSQGWT-PNQNYTHWSSSHHFYLGDWLC-KFGCKFTQMGGERSKDNAMN 63
           I  G  +HKVG+S GWT  + NY  W+S+  F +GD L  K+   F  +         + 
Sbjct: 22  ISVGGTVHKVGDSDGWTIMSVNYETWASTITFQVGDSLVFKYNKDFHDV-------TEVT 81

Query: 64  KRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAVYM---STVDHS 123
              +E C     +     G   V        +F  G  G+C  G KL +++   S    +
Sbjct: 82  HNDYEMCEPSKPLARYETGSDIVILTKPGLQHFICGFPGHCDMGQKLQIHVLPASLGPVA 140

Query: 124 APAPSP 125
           AP P P
Sbjct: 142 APVPGP 140

[Close]

BLAST of CsGy3G036110 vs. Swiss-Prot
Match: sp|Q96316|BCB3_ARATH (Uclacyanin-3 OS=Arabidopsis thaliana OX=3702 GN=UCC3 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 3.9e-04
Identity = 30/99 (30.30%), Postives = 46/99 (46.46%), Query Frame = 0


Query: 12  KVGNSQGWTPNQNYTHWSSSHHFYLGDWLCKFGCKFTQMGGERSKDNAMNKRSFEDCNEK 71
           KVG+  GWT N +YT W +   F +GD L     +F    G     + ++K  +++C+  
Sbjct: 25  KVGDISGWTSNLDYTVWLTGKTFRVGDTL-----EFVY--GLSHSVSVVDKAGYDNCDSS 84

Query: 72  DFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAV 111
              +N   G   +   T    +F     G+C  GMKLAV
Sbjct: 85  GATQNFADGDTKIDLTTVGTMHFLCPTFGHCKNGMKLAV 116

[Close]

BLAST of CsGy3G036110 vs. TrEMBL
Match: tr|A0A0A0LF66|A0A0A0LF66_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G824210 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 2.7e-74
Identity = 140/160 (87.50%), Postives = 142/160 (88.75%), Query Frame = 0


Query: 1   MVTIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWLCKFGCKFTQMGGERSKDNAM 60
           MVTIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWL      +            +
Sbjct: 66  MVTIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWL------YFVFDKRYYNVLEV 125

Query: 61  NKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAVYMSTVDHSAP 120
           NKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAVYMSTVDHSAP
Sbjct: 126 NKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAVYMSTVDHSAP 185

Query: 121 APSPAGSNKSGGAFLSNNPTLCCSILNALLLFVAIFFLGG 161
           APSPAGSNKSGGAFLSNNPTLCCSILNALLLFVAIFFLGG
Sbjct: 186 APSPAGSNKSGGAFLSNNPTLCCSILNALLLFVAIFFLGG 219

[Close]

BLAST of CsGy3G036110 vs. TrEMBL
Match: tr|A0A1S3B8J9|A0A1S3B8J9_CUCME (lamin-like protein OS=Cucumis melo OX=3656 GN=LOC103486965 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.7e-60
Identity = 122/163 (74.85%), Postives = 134/163 (82.21%), Query Frame = 0


Query: 1   MVTIG-KGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWLCKFGCKFTQMGGERSKDNA 60
           +V IG KGE LHKVGNS+GW+PNQNYTHWS+SHHFYLGDWL      +            
Sbjct: 29  VVRIGIKGEVLHKVGNSEGWSPNQNYTHWSTSHHFYLGDWL------YFVFDKRYYNVLE 88

Query: 61  MNKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAVYMSTVDHSA 120
           +NKRS+EDCN+KDFIKNITRGGRDVFQL+ELHPYFFIGGGGYCFQGMKLAVY+S VD SA
Sbjct: 89  VNKRSYEDCNDKDFIKNITRGGRDVFQLSELHPYFFIGGGGYCFQGMKLAVYVSAVD-SA 148

Query: 121 PAPSPAGSNKSGG--AFLSNNPTLCCSILNALLLFVAIFFLGG 161
           PAPSPA SNKSGG  +FLSNNPT CCS+LNALLLFVAIF L G
Sbjct: 149 PAPSPAASNKSGGGASFLSNNPTFCCSVLNALLLFVAIFLLRG 184

[Close]

BLAST of CsGy3G036110 vs. TrEMBL
Match: tr|Q2HWC7|Q2HWC7_MEDTR (Blue (Type 1) copper domain OS=Medicago truncatula OX=3880 GN=MtrDRAFT_AC147482g4v2 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.7e-28
Identity = 75/165 (45.45%), Postives = 103/165 (62.42%), Query Frame = 0


Query: 1   MVTIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWLCK--FGCKFTQMGGERSKDN 60
           MV +G G +LHKVG S+GW  N NYT WSS  H Y+GDWL +   GC   +   ++   N
Sbjct: 22  MVVMG-GPKLHKVGGSKGWKENVNYTTWSSQEHVYVGDWLSRRLSGCSQGEFVFDKRYYN 81

Query: 61  AM--NKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAVYMSTVD 120
            +  NK  ++ C +  FI+N+TRGGRDV QLTE   Y+FI GGGYCF GMK+AV     +
Sbjct: 82  VLEVNKTGYDYCIDMTFIRNLTRGGRDVVQLTEAKTYYFITGGGYCFHGMKVAV--DVQE 141

Query: 121 HSAPAPSPAGSN--KSGGAFLSNNPTLCCSILNALLLFVAIFFLG 160
           H  PAPSP+ S+  KSGG  +  +   C  I+ A +++V++  +G
Sbjct: 142 HPTPAPSPSLSDTAKSGGDSILPSMYTCFGIIVANVVYVSLVLVG 183

[Close]

BLAST of CsGy3G036110 vs. TrEMBL
Match: tr|G7KLC9|G7KLC9_MEDTR (Plastocyanin-like domain protein OS=Medicago truncatula OX=3880 GN=11416852 PE=4 SV=2)

HSP 1 Score: 129.4 bits (324), Expect = 7.2e-27
Identity = 75/163 (46.01%), Postives = 101/163 (61.96%), Query Frame = 0


Query: 1   MVTIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWLCKFGCKFTQMGGERSKDNAM 60
           MV +G G +LHKVG S+GW  N NYT WSS  H Y+GDWL     KF     ++   N +
Sbjct: 22  MVVMG-GPKLHKVGGSKGWKENVNYTTWSSQEHVYVGDWL-----KFV---FDKRYYNVL 81

Query: 61  --NKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAVYMSTVDHS 120
             NK  ++ C +  FI+N+TRGGRDV QLTE   Y+FI GGGYCF GMK+AV     +H 
Sbjct: 82  EVNKTGYDYCIDMTFIRNLTRGGRDVVQLTEAKTYYFITGGGYCFHGMKVAV--DVQEHP 141

Query: 121 APAPSPAGSN--KSGGAFLSNNPTLCCSILNALLLFVAIFFLG 160
            PAPSP+ S+  KSGG  +  +   C  I+ A +++V++  +G
Sbjct: 142 TPAPSPSLSDTAKSGGDSILPSMYTCFGIIVANVVYVSLVLVG 173

[Close]

BLAST of CsGy3G036110 vs. TrEMBL
Match: tr|A0A1S2XHH0|A0A1S2XHH0_CICAR (lamin-like protein OS=Cicer arietinum OX=3827 GN=LOC101499436 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.0e-25
Identity = 69/160 (43.12%), Postives = 99/160 (61.88%), Query Frame = 0


Query: 1   MVTIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWLC-KFGCKFTQMGGERSKDNA 60
           MV +G G  LHKVG  +GW  + NYT WSS  H Y+GDWL  +F  ++  +         
Sbjct: 24  MVVMG-GPVLHKVGGGKGWNEHVNYTIWSSQEHVYVGDWLIFRFDKRYYNV-------LE 83

Query: 61  MNKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAVYMSTVDHSA 120
           +NK ++E C + +FIKN+TRGGRDV QLTE   Y+F+  GGYCF GMK+A+ +     +A
Sbjct: 84  VNKTNYEYCIDTNFIKNVTRGGRDVVQLTEARTYYFLSSGGYCFHGMKVAIDVQEHQPAA 143

Query: 121 PAPSPAGSNKSGGAFLSNNPTLCCSILNALLLFVAIFFLG 160
           P+PSP  +  SG +FL +  T C  I+ A +++V +  +G
Sbjct: 144 PSPSPT-AKSSGDSFLPSMFT-CFGIIVANVVYVTLVSMG 173

The following BLAST results are available for this feature:

BLAST of CsGy3G036110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136681.1	4.1e-74	87.50	PREDICTED: lamin-like protein [Cucumis sativus]	[more]
KGN59524.1	4.1e-74	87.50	hypothetical protein Csa_3G824210 [Cucumis sativus]	[more]
XP_008443357.1	2.5e-60	74.85	PREDICTED: lamin-like protein [Cucumis melo]	[more]
XP_022926318.1	2.5e-39	58.97	lamin-like protein [Cucurbita moschata]	[more]
XP_023530289.1	3.6e-38	58.06	lamin-like protein [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy3G036110 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G27035.1	8.3e-21	37.42	early nodulin-like protein 20	[more]
AT4G12880.1	5.7e-14	40.40	early nodulin-like protein 19	[more]
AT3G17675.1	9.8e-06	30.69	Cupredoxin superfamily protein	[more]
AT3G60280.1	2.2e-05	30.30	uclacyanin 3	[more]
AT2G31050.1	4.9e-05	28.57	Cupredoxin superfamily protein	[more]

BLAST of CsGy3G036110 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q96316\|BCB3_ARATH	3.9e-04	30.30	Uclacyanin-3 OS=Arabidopsis thaliana OX=3702 GN=UCC3 PE=2 SV=1	[more]

BLAST of CsGy3G036110 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LF66\|A0A0A0LF66_CUCSA	2.7e-74	87.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G824210 PE=4 SV=1	[more]
tr\|A0A1S3B8J9\|A0A1S3B8J9_CUCME	1.7e-60	74.85	lamin-like protein OS=Cucumis melo OX=3656 GN=LOC103486965 PE=4 SV=1	[more]
tr\|Q2HWC7\|Q2HWC7_MEDTR	1.7e-28	45.45	Blue (Type 1) copper domain OS=Medicago truncatula OX=3880 GN=MtrDRAFT_AC147482g...	[more]
tr\|G7KLC9\|G7KLC9_MEDTR	7.2e-27	46.01	Plastocyanin-like domain protein OS=Medicago truncatula OX=3880 GN=11416852 PE=4...	[more]
tr\|A0A1S2XHH0\|A0A1S2XHH0_CICAR	1.0e-25	43.13	lamin-like protein OS=Cicer arietinum OX=3827 GN=LOC101499436 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity

Vocabulary: **INTERPRO**
Term	Definition
IPR039391	Phytocyanin
IPR008972	Cupredoxin
IPR003245	Phytocyanin_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009055	electron carrier activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G036110.1	CsGy3G036110.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 19..106 e-value: 2.3E-10 score: 40.3
IPR003245	Phytocyanin domain	PRODOM	PD003122		coord: 51..125 e-value: 1.0E-14 score: 191.0
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 9..114 score: 17.247
IPR008972	Cupredoxin	GENE3D	G3DSA:2.60.40.420		coord: 8..118 e-value: 7.2E-18 score: 66.6
IPR008972	Cupredoxin	SUPERFAMILY	SSF49503	Cupredoxins	coord: 10..111
None	No IPR available	PANTHER	PTHR33021:SF17	SUBFAMILY NOT NAMED	coord: 7..154
IPR039391	Phytocyanin	PANTHER	PTHR33021	FAMILY NOT NAMED	coord: 7..154

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G036110	Cla016968	Watermelon (97103) v1	cgybwmB187
CsGy3G036110	Csa3G824210	Cucumber (Chinese Long) v2	cgybcuB110
CsGy3G036110	MELO3C009833	Melon (DHL92) v3.5.1	cgybmeB184
CsGy3G036110	ClCG10G015480	Watermelon (Charleston Gray)	cgybwcgB179
CsGy3G036110	CSPI03G38570	Wild cucumber (PI 183967)	cgybcpiB111
CsGy3G036110	CmaCh11G011590	Cucurbita maxima (Rimu)	cgybcmaB299
CsGy3G036110	CmaCh14G005670	Cucurbita maxima (Rimu)	cgybcmaB306
CsGy3G036110	CmoCh14G005700	Cucurbita moschata (Rifu)	cgybcmoB279
CsGy3G036110	CmoCh11G012010	Cucurbita moschata (Rifu)	cgybcmoB272
CsGy3G036110	Lsi03G015240	Bottle gourd (USVL1VR-Ls)	cgyblsiB171
CsGy3G036110	Cp4.1LG04g00310	Cucurbita pepo (Zucchini)	cgybcpeB420
CsGy3G036110	Cp4.1LG03g08260	Cucurbita pepo (Zucchini)	cgybcpeB395
CsGy3G036110	MELO3C009833.2	Melon (DHL92) v3.6.1	cgybmedB185
CsGy3G036110	CsaV3_3G040980	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G036110	Cla97C10G198340	Watermelon (97103) v2	cgybwmbB178
CsGy3G036110	Bhi11G002410	Wax gourd	cgybwgoB231
CsGy3G036110	Carg09807	Silver-seed gourd	carcgybB0444

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G036110	Wax gourd	cgybwgoB211
CsGy3G036110	Wax gourd	cgybwgoB255