Cla016968 (gene) Watermelon (97103) v1

Overview
NameCla016968
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionBlue copper-like protein (AHRD V1 *--- B8Y8A0_GOSHI); contains Interpro domain(s) IPR003245 Plastocyanin-like
LocationChr10 : 21509569 .. 21510993 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATTCTGAGAAGAAGAGTCGACGGCGGTGTGCTTCTGGTGGCGGCCGCTCTGGTGGTACTGCTGGCGGCGGTACCGGAAGTATCAGCGACACGGTGGACTGTCGGTGGCAACATGGGTTGGACTACCAATGTGAACTACACTATCTGGGCTCAGGGAAAGCACTTCTATTATGATGACTGGCTCTGTAAGCATTTCTATCTATAGATCTGTGAGTGGTGTTTAAAGTTATAGCTGATTTTCAGATCTTATGTGGTTTTTTAAACTCAGTAGTTGGTTTTAGGGGAGATTTTGATTTTGGGGTTTTGTAGGATTTGTTGGGGGTTTCATACTTTTAACTTGAAGTTTTTAGTTCTGTTTGTTGCTGCTGAGAAAATTGGTGGAGGAATTTGTCAAATGTGGGGGAAAATGGAGTTTCTATATGAGTTGTTTTGAATTGATTGTTTCCCAACTCAAGATAACTTCTTATATATATATGTTTGTGGGTGTGGATGCTCAGACATGAGAGGTTTCTCTGTTTATTTGAGGTTCTTATATTACCATATGAATGTGGATGGGTTAGAAACTTAGGATTGTTTGTGTTGTTATTTTTCTGATTGTTCCATGGGTTAGGAACATATAAATACAATGCAGTGACATTCTTTCAGCATGTTTTGTTGTTTGTTAGAGAAATTTTCTTGGAGGTCTTCTAACTTAGTCCAAATATGCCTAATTTTGAAGTTTCTAGCAAATGAGTTTAACTAACAAAAGTAGGAAGATGGGAGTGTGTATTTGTGAATGGCTCTGGCTTGTCTGTAACCAGAAAAACACACACAGGGTTCTTCTCCGAATCAACCAAAAATTCTTTTGGTTTTTCGTTGATGAAGAATGTTTGTTTGTTTTCCAAAATCCGTTTAGAGCTTAGGTCGAAGTAGAGCTTAGCTCTGGCTTGTATGTAACCAGAAAAGCACACACAATGTTCTTCTCCGAATCAATGAAAAACTCTTTCGATTTTTCATCGATGGAGAATGTTTGTTTGTTTTCAAATGATCGAAGAGCGATTTTGGCTCACTTCTTTCCTCTTGTTGTGTATTAGTTTTTGTGTATGACAGGAACCAAATGAATGTGTTGGAGGTGAACAAGACAGACTATGAGAATTGCAATTCTGATCATCCACTCCACAATTTCACCACTGGAGCTGGAAGAGATGTGGTTCATTTGAATGTGACCAGGCCTTATTACTTCATAAGTGGCAAGGGCTTTTGCTATGGAGGCATGAAGCTCGCTATCCATGTCGAACACCTACCTCCCCCGCCCTCGGCCTCACACTTGAACGAAAAGAGCAGTGCTCTCAGATCTACCTACATTGGCCACACCCCATTTGTTTTAACTGCTGTTTTCGCCATTGCTGCTCTGTACGAAGCTTTAGCCCAGGTCTGGTAG

mRNA sequence

ATGGAGATTCTGAGAAGAAGAGTCGACGGCGGTGTGCTTCTGGTGGCGGCCGCTCTGGTGGTACTGCTGGCGGCGGTACCGGAAGTATCAGCGACACGGTGGACTGTCGGTGGCAACATGGGTTGGACTACCAATGTGAACTACACTATCTGGGCTCAGGGAAAGCACTTCTATTATGATGACTGGCTCTTTTTTGTGTATGACAGGAACCAAATGAATGTGTTGGAGGTGAACAAGACAGACTATGAGAATTGCAATTCTGATCATCCACTCCACAATTTCACCACTGGAGCTGGAAGAGATGTGGTTCATTTGAATGTGACCAGGCCTTATTACTTCATAAGTGGCAAGGGCTTTTGCTATGGAGGCATGAAGCTCGCTATCCATGTCGAACACCTACCTCCCCCGCCCTCGGCCTCACACTTGAACGAAAAGAGCAGTGCTCTCAGATCTACCTACATTGGCCACACCCCATTTGTTTTAACTGCTGTTTTCGCCATTGCTGCTCTGTACGAAGCTTTAGCCCAGGTCTGGTAG

Coding sequence (CDS)

ATGGAGATTCTGAGAAGAAGAGTCGACGGCGGTGTGCTTCTGGTGGCGGCCGCTCTGGTGGTACTGCTGGCGGCGGTACCGGAAGTATCAGCGACACGGTGGACTGTCGGTGGCAACATGGGTTGGACTACCAATGTGAACTACACTATCTGGGCTCAGGGAAAGCACTTCTATTATGATGACTGGCTCTTTTTTGTGTATGACAGGAACCAAATGAATGTGTTGGAGGTGAACAAGACAGACTATGAGAATTGCAATTCTGATCATCCACTCCACAATTTCACCACTGGAGCTGGAAGAGATGTGGTTCATTTGAATGTGACCAGGCCTTATTACTTCATAAGTGGCAAGGGCTTTTGCTATGGAGGCATGAAGCTCGCTATCCATGTCGAACACCTACCTCCCCCGCCCTCGGCCTCACACTTGAACGAAAAGAGCAGTGCTCTCAGATCTACCTACATTGGCCACACCCCATTTGTTTTAACTGCTGTTTTCGCCATTGCTGCTCTGTACGAAGCTTTAGCCCAGGTCTGGTAG

Protein sequence

MEILRRRVDGGVLLVAAALVVLLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQGKHFYYDDWLFFVYDRNQMNVLEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAIHVEHLPPPPSASHLNEKSSALRSTYIGHTPFVLTAVFAIAALYEALAQVW
Homology
[Close]
BLAST of Cla016968 vs. Swiss-Prot
Match: LAML_ARATH (Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.4e-47
Identity = 89/169 (52.66%), Postives = 119/169 (70.41%), Query Frame = 1 

Query: 12  VLLVAAALVVLLAA-VPEVSATRWTVGGNMGWTTNVNYTIWAQGKHFYYDDWLFFVYDRN 71
           VL+ A  L  L+AA +P V+A ++TVG N  W  N+NYTIWAQGKHFY  DWL+FV+DRN
Sbjct: 6   VLITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVFDRN 65

Query: 72  QMNVLEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAIHV 131
           Q N+LEVNKTDYE C +DHP+ N+T GAGRD+V LN T+ YY + GKG CYGGMKL++ V
Sbjct: 66  QHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSVKV 125

Query: 132 EHLPPPPSASHLNEKSSALRSTYIGHTPFVL-TAVFAIAALYEALAQVW 179
           E LPPPP ++ +    S   S   G   F++  ++FA  A+++ ++++W
Sbjct: 126 EKLPPPPKSAPVKNIGSV--SMVTGLAQFMIPVSLFAFPAMWDVISRMW 172

[Close]
BLAST of Cla016968 vs. Swiss-Prot
Match: BCB3_ARATH (Uclacyanin-3 OS=Arabidopsis thaliana GN=UCC3 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.8e-16
Identity = 52/125 (41.60%), Postives = 67/125 (53.60%), Query Frame = 1 

Query: 15  VAAALVVLLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQGKHFYYDDWLFFVYDRNQMNV 74
           VAAAL++ LAAVP V A  + VG   GWT+N++YT+W  GK F   D L FVY  +  +V
Sbjct: 5   VAAALLLFLAAVPAVFAATFKVGDISGWTSNLDYTVWLTGKTFRVGDTLEFVYGLSH-SV 64

Query: 75  LEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISGK-GFCYGGMKLAIHVEHL 134
             V+K  Y+NC+S     NF  G  +  + L      +F+    G C  GMKLA+ V   
Sbjct: 65  SVVDKAGYDNCDSSGATQNFADGDTK--IDLTTVGTMHFLCPTFGHCKNGMKLAVPVLAA 124

Query: 135 PPPPS 139
            P PS
Sbjct: 125 APSPS 126

[Close]
BLAST of Cla016968 vs. Swiss-Prot
Match: BCP_PEA (Blue copper protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 9.6e-12
Identity = 50/151 (33.11%), Postives = 70/151 (46.36%), Query Frame = 1 

Query: 13  LLVAAALVVLLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQGKHFYYDDWLFFVYDRNQM 72
           L++   L ++  A+P + AT +TVG   GW    +Y+ WA  K F   D L F Y     
Sbjct: 7   LVLCFLLAIINMALPSL-ATVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGAH 66

Query: 73  NVLEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISG-KGFCYGGMKLAIHVE 132
            V EV ++DY++C S + +   +TGA    + L     +YFI G  G   GGMKL+I V+
Sbjct: 67  TVDEVKESDYKSCTSGNSISTDSTGA--TTIPLKKAGKHYFICGVPGHSTGGMKLSIKVK 126

Query: 133 HLPPPPSASHLNEKSSALRSTYIGHTPFVLT 163
                 +A      SS   S     TP   T
Sbjct: 127 ASSGSSAAPSATPSSSGKGSPSSDDTPAATT 154

[Close]
BLAST of Cla016968 vs. Swiss-Prot
Match: ENL2_ARATH (Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 8.1e-11
Identity = 41/113 (36.28%), Postives = 57/113 (50.44%), Query Frame = 1 

Query: 30  SATRWTVGGNMGWTTNV--NYTIWAQGKHFYYDDWLFFVYDRNQMNVLEVNKTDYENCNS 89
           +A ++ VGG+  W TN   NY  W+    F   D L+F Y +   +VLEVNK DY+ CN+
Sbjct: 27  NARKFNVGGSGAWVTNPPENYESWSGKNRFLVHDTLYFSYAKGADSVLEVNKADYDACNT 86

Query: 90  DHPLHNFTTGAGRDVVHLNVTRPYYFISG-KGFCYGGMKLAIHVEHLPPPPSA 140
            +P+     G     + L+   P+YFISG +  C  G KL + V     P +A
Sbjct: 87  KNPIKRVDDGDSE--ISLDRYGPFYFISGNEDNCKKGQKLNVVVISARIPSTA 137

[Close]
BLAST of Cla016968 vs. Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.1e-10
Identity = 39/104 (37.50%), Postives = 56/104 (53.85%), Query Frame = 1 

Query: 31  ATRWTVGGNMGWTTNV--NYTIWAQGKHFYYDDWLFFVYDRNQMNVLEVNKTDYENCNSD 90
           AT   VG + GWTT V  +Y  WA    F+  D L F Y+    NVL+V++  +++CNS 
Sbjct: 1   ATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSS 60

Query: 91  HPLHNFTTGAGRDVVHLNVTRPYYFISG-KGFCYGGMKLAIHVE 132
            P  ++T+GA  D + L     +YF+ G  G C  G K+ I V+
Sbjct: 61  SPAASYTSGA--DSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVD 102

[Close]
BLAST of Cla016968 vs. TrEMBL
Match: A0A0A0LC11_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G824220 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 6.3e-87
Identity = 157/179 (87.71%), Postives = 164/179 (91.62%), Query Frame = 1 

Query: 1   MEILRRRVDGGVLLVA-AALVVLLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQGKHFYY 60
           ME+LR RV G  LLVA AA+V+LLAAVPEVSATRWTVGGNMGW TNVNYT WAQGKHFYY
Sbjct: 1   MEVLRTRVGGSGLLVAVAAVVILLAAVPEVSATRWTVGGNMGWNTNVNYTTWAQGKHFYY 60

Query: 61  DDWLFFVYDRNQMNVLEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGF 120
           DDWLFFVYDRNQMNVLEVNKTDYENC SDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGF
Sbjct: 61  DDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGF 120

Query: 121 CYGGMKLAIHVEHLPPPPSASHLNEKSSALRSTYIGHTPFVLTAVFAIAALYEALAQVW 179
           C+GGMKLAIHVEHLPPPPS+S LNEKSSALRST  GHTPFVLTAVFAIAA+ E   +VW
Sbjct: 121 CFGGMKLAIHVEHLPPPPSSSPLNEKSSALRSTNTGHTPFVLTAVFAIAAVLEVFTRVW 179

[Close]
BLAST of Cla016968 vs. TrEMBL
Match: W9QQU4_9ROSA (Lamin-like protein OS=Morus notabilis GN=L484_020958 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 6.2e-66
Identity = 132/183 (72.13%), Postives = 143/183 (78.14%), Query Frame = 1 

Query: 1   MEILRRRVDGGVLLVAAALVV----LLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQGKH 60
           ME LR  +  G     A LV+    +L  VPEVSATR+TVGGN GWTTNVNYTIWAQGKH
Sbjct: 1   MERLRSGILSGSRATVAGLVLFALAILVTVPEVSATRYTVGGNQGWTTNVNYTIWAQGKH 60

Query: 61  FYYDDWLFFVYDRNQMNVLEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISG 120
           FY DDWLFFVYDRNQMN+LEVNKTDYE CN+DHPLHN+T GAGRDVV LNVTR YYFISG
Sbjct: 61  FYKDDWLFFVYDRNQMNILEVNKTDYEACNADHPLHNWTRGAGRDVVPLNVTRHYYFISG 120

Query: 121 KGFCYGGMKLAIHVEHLPPPPSASHLNEKSSALRST-YIGHTPFVLTAVFAIAALYEALA 179
           KGFCYGGMKLAI VE  PPPPSAS +NEKSSA RST Y G   F L AVFAI A ++A  
Sbjct: 121 KGFCYGGMKLAIRVETPPPPPSASPINEKSSAPRSTSYRG--KFFLPAVFAIGAAWDAFV 180

[Close]
BLAST of Cla016968 vs. TrEMBL
Match: A9PAA9_POPTR (Plastocyanin-like domain-containing family protein OS=Populus trichocarpa GN=POPTR_0017s12460g PE=2 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 3.1e-65
Identity = 121/171 (70.76%), Postives = 142/171 (83.04%), Query Frame = 1 

Query: 10  GGVLLVAAALVV--LLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQGKHFYYDDWLFFVY 69
           G  ++VA A++V  ++  VPEVSATRWTVG NMGWT+NVNYTIWAQGKHFY  DWLFFVY
Sbjct: 8   GSPMMVALAVLVFAMVVMVPEVSATRWTVGSNMGWTSNVNYTIWAQGKHFYNGDWLFFVY 67

Query: 70  DRNQMNVLEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLA 129
           DRNQMN+LEVNKTDYE+CNSDHPLHN+T GAGRDVV LNVTR YYFISGKGFCYGGMKLA
Sbjct: 68  DRNQMNILEVNKTDYESCNSDHPLHNWTRGAGRDVVPLNVTRNYYFISGKGFCYGGMKLA 127

Query: 130 IHVEHLPPPPSASHLNEKSSALRSTYIGHTPFVLTAVFAIAALYEALAQVW 179
           +HVE+ PPPP+AS L+EKS +  S +   + +VL  VFAI AL++A  + W
Sbjct: 128 VHVENPPPPPTASPLDEKSGSPSSIF--RSQYVLPTVFAIGALWDAFVRFW 176

[Close]
BLAST of Cla016968 vs. TrEMBL
Match: A0A061EEY3_THECC (Early nodulin-like protein 17 OS=Theobroma cacao GN=TCM_018674 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 2.6e-64
Identity = 121/167 (72.46%), Postives = 136/167 (81.44%), Query Frame = 1 

Query: 12  VLLVAAALVVLLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQGKHFYYDDWLFFVYDRNQ 71
           V++VAA    L+  VP+  ATR+ VG NMGWTTNVNYTIWAQ KHFY  DWLFFVYDRNQ
Sbjct: 9   VVVVAAVAFALVVMVPQADATRYIVGANMGWTTNVNYTIWAQSKHFYNGDWLFFVYDRNQ 68

Query: 72  MNVLEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAIHVE 131
           MNVLEVNKTDYE+CNSDHPLHN+TTGAGRDVV LNVTR YYFISGKGFCYGGMKLA+ VE
Sbjct: 69  MNVLEVNKTDYESCNSDHPLHNWTTGAGRDVVPLNVTRHYYFISGKGFCYGGMKLAVRVE 128

Query: 132 HLPPPPSASHLNEKSSALRSTYIGHTPFVLTAVFAIAALYEALAQVW 179
           + PPPP++S LNEKS +  S Y G    VL AVFAI AL++A  +VW
Sbjct: 129 NPPPPPTSSPLNEKSGSPSSMYRGR--IVLPAVFAIGALWDAFVRVW 173

[Close]
BLAST of Cla016968 vs. TrEMBL
Match: A0A067JTG9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19891 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 2.9e-63
Identity = 120/167 (71.86%), Postives = 136/167 (81.44%), Query Frame = 1 

Query: 13  LLVAAALVVLLA-AVPEVSATRWTVGGNMGWTTNVNYTIWAQGKHFYYDDWLFFVYDRNQ 72
           ++V  A+V+L+   VPEVSATRWTVG NMGWTTNVNYTIWAQ KHFY  DWLFF YDRNQ
Sbjct: 14  MMVPVAVVILMVFMVPEVSATRWTVGSNMGWTTNVNYTIWAQDKHFYNGDWLFFSYDRNQ 73

Query: 73  MNVLEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAIHVE 132
           MNVLEVNKTDYE+CNSDHPLHN+TTGAGRDVV LNVTR YYFISGKGFC+GGMKLA+HVE
Sbjct: 74  MNVLEVNKTDYESCNSDHPLHNWTTGAGRDVVPLNVTRNYYFISGKGFCFGGMKLAVHVE 133

Query: 133 HLPPPPSASHLNEKSSALRSTYIGHTPFVLTAVFAIAALYEALAQVW 179
           + PPPP+A+ +NE SSA  S  I    +VL A  AI A ++A  Q W
Sbjct: 134 NPPPPPTAAPVNENSSA--SYVILRGQYVLPAALAIGAFWDAFVQFW 178

[Close]
BLAST of Cla016968 vs. NCBI nr
Match: gi|659085323|ref|XP_008443359.1| (PREDICTED: lamin-like protein [Cucumis melo])

HSP 1 Score: 334.0 bits (855), Expect = 1.7e-88
Identity = 159/180 (88.33%), Postives = 168/180 (93.33%), Query Frame = 1 

Query: 1   MEILRRRVDGGVLLVA--AALVVLLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQGKHFY 60
           ME+LR RV G  LLVA  AA+VVLLA+VPEVSATRWTVGGNMGWTTNVNY+ WAQGKHFY
Sbjct: 1   MEVLRTRVGGSGLLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFY 60

Query: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120
           YDDWLFFVYDRNQMNVLEVNKTDYENC SDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG
Sbjct: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120

Query: 121 FCYGGMKLAIHVEHLPPPPSASHLNEKSSALRSTYIGHTPFVLTAVFAIAALYEALAQVW 179
           FCYGGMKLAIHVEHLPPPPSA  +NEKSSALRSTY GHTPFVLTAVFAIAA++EA ++VW
Sbjct: 121 FCYGGMKLAIHVEHLPPPPSALPMNEKSSALRSTYTGHTPFVLTAVFAIAAVFEAFSRVW 180

[Close]
BLAST of Cla016968 vs. NCBI nr
Match: gi|449437808|ref|XP_004136682.1| (PREDICTED: lamin-like protein [Cucumis sativus])

HSP 1 Score: 328.2 bits (840), Expect = 9.1e-87
Identity = 157/179 (87.71%), Postives = 164/179 (91.62%), Query Frame = 1 

Query: 1   MEILRRRVDGGVLLVA-AALVVLLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQGKHFYY 60
           ME+LR RV G  LLVA AA+V+LLAAVPEVSATRWTVGGNMGW TNVNYT WAQGKHFYY
Sbjct: 1   MEVLRTRVGGSGLLVAVAAVVILLAAVPEVSATRWTVGGNMGWNTNVNYTTWAQGKHFYY 60

Query: 61  DDWLFFVYDRNQMNVLEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGF 120
           DDWLFFVYDRNQMNVLEVNKTDYENC SDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGF
Sbjct: 61  DDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGF 120

Query: 121 CYGGMKLAIHVEHLPPPPSASHLNEKSSALRSTYIGHTPFVLTAVFAIAALYEALAQVW 179
           C+GGMKLAIHVEHLPPPPS+S LNEKSSALRST  GHTPFVLTAVFAIAA+ E   +VW
Sbjct: 121 CFGGMKLAIHVEHLPPPPSSSPLNEKSSALRSTNTGHTPFVLTAVFAIAAVLEVFTRVW 179

[Close]
BLAST of Cla016968 vs. NCBI nr
Match: gi|703073526|ref|XP_010089568.1| (Lamin-like protein [Morus notabilis])

HSP 1 Score: 258.5 bits (659), Expect = 8.8e-66
Identity = 132/183 (72.13%), Postives = 143/183 (78.14%), Query Frame = 1 

Query: 1   MEILRRRVDGGVLLVAAALVV----LLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQGKH 60
           ME LR  +  G     A LV+    +L  VPEVSATR+TVGGN GWTTNVNYTIWAQGKH
Sbjct: 1   MERLRSGILSGSRATVAGLVLFALAILVTVPEVSATRYTVGGNQGWTTNVNYTIWAQGKH 60

Query: 61  FYYDDWLFFVYDRNQMNVLEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISG 120
           FY DDWLFFVYDRNQMN+LEVNKTDYE CN+DHPLHN+T GAGRDVV LNVTR YYFISG
Sbjct: 61  FYKDDWLFFVYDRNQMNILEVNKTDYEACNADHPLHNWTRGAGRDVVPLNVTRHYYFISG 120

Query: 121 KGFCYGGMKLAIHVEHLPPPPSASHLNEKSSALRST-YIGHTPFVLTAVFAIAALYEALA 179
           KGFCYGGMKLAI VE  PPPPSAS +NEKSSA RST Y G   F L AVFAI A ++A  
Sbjct: 121 KGFCYGGMKLAIRVETPPPPPSASPINEKSSAPRSTSYRG--KFFLPAVFAIGAAWDAFV 180

[Close]
BLAST of Cla016968 vs. NCBI nr
Match: gi|743879081|ref|XP_011035820.1| (PREDICTED: lamin-like protein [Populus euphratica])

HSP 1 Score: 256.1 bits (653), Expect = 4.4e-65
Identity = 122/171 (71.35%), Postives = 140/171 (81.87%), Query Frame = 1 

Query: 10  GGVLLVAAALVV--LLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQGKHFYYDDWLFFVY 69
           G  ++VA A++V  ++  VPEVSATRWTVG NMGWT NVNYTIWAQGKHFY  DWLFFVY
Sbjct: 8   GSPMMVALAVLVFAMVVMVPEVSATRWTVGSNMGWTNNVNYTIWAQGKHFYNGDWLFFVY 67

Query: 70  DRNQMNVLEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLA 129
           DRNQMN+LEVNKTDYE+CNSDHPLHN+T GAGRDVV LNVTR YYFISGKGFCYGGMKLA
Sbjct: 68  DRNQMNILEVNKTDYESCNSDHPLHNWTRGAGRDVVPLNVTRNYYFISGKGFCYGGMKLA 127

Query: 130 IHVEHLPPPPSASHLNEKSSALRSTYIGHTPFVLTAVFAIAALYEALAQVW 179
           +HVE+ PPPP+AS LNEKS +  S +   + +VL  VFAI AL++A    W
Sbjct: 128 VHVENPPPPPTASPLNEKSGSPSSIF--RSQYVLPTVFAIGALWDAFVWSW 176

[Close]
BLAST of Cla016968 vs. NCBI nr
Match: gi|224141443|ref|XP_002324082.1| (plastocyanin-like domain-containing family protein [Populus trichocarpa])

HSP 1 Score: 256.1 bits (653), Expect = 4.4e-65
Identity = 121/171 (70.76%), Postives = 142/171 (83.04%), Query Frame = 1 

Query: 10  GGVLLVAAALVV--LLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQGKHFYYDDWLFFVY 69
           G  ++VA A++V  ++  VPEVSATRWTVG NMGWT+NVNYTIWAQGKHFY  DWLFFVY
Sbjct: 8   GSPMMVALAVLVFAMVVMVPEVSATRWTVGSNMGWTSNVNYTIWAQGKHFYNGDWLFFVY 67

Query: 70  DRNQMNVLEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLA 129
           DRNQMN+LEVNKTDYE+CNSDHPLHN+T GAGRDVV LNVTR YYFISGKGFCYGGMKLA
Sbjct: 68  DRNQMNILEVNKTDYESCNSDHPLHNWTRGAGRDVVPLNVTRNYYFISGKGFCYGGMKLA 127

Query: 130 IHVEHLPPPPSASHLNEKSSALRSTYIGHTPFVLTAVFAIAALYEALAQVW 179
           +HVE+ PPPP+AS L+EKS +  S +   + +VL  VFAI AL++A  + W
Sbjct: 128 VHVENPPPPPTASPLDEKSGSPSSIF--RSQYVLPTVFAIGALWDAFVRFW 176

The following BLAST results are available for this feature:
BLAST of Cla016968 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LAML_ARATH1.4e-4752.66Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1[more]
BCB3_ARATH3.8e-1641.60Uclacyanin-3 OS=Arabidopsis thaliana GN=UCC3 PE=2 SV=1[more]
BCP_PEA9.6e-1233.11Blue copper protein OS=Pisum sativum PE=2 SV=1[more]
ENL2_ARATH8.1e-1136.28Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520 PE=1 SV=1[more]
MAVI_CUCPE3.1e-1037.50Mavicyanin OS=Cucurbita pepo PE=1 SV=1[more]
BLAST of Cla016968 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LC11_CUCSA6.3e-8787.71Uncharacterized protein OS=Cucumis sativus GN=Csa_3G824220 PE=4 SV=1[more]
W9QQU4_9ROSA6.2e-6672.13Lamin-like protein OS=Morus notabilis GN=L484_020958 PE=4 SV=1[more]
A9PAA9_POPTR3.1e-6570.76Plastocyanin-like domain-containing family protein OS=Populus trichocarpa GN=POP... [more]
A0A061EEY3_THECC2.6e-6472.46Early nodulin-like protein 17 OS=Theobroma cacao GN=TCM_018674 PE=4 SV=1[more]
A0A067JTG9_JATCU2.9e-6371.86Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19891 PE=4 SV=1[more]
BLAST of Cla016968 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659085323|ref|XP_008443359.1|1.7e-8888.33PREDICTED: lamin-like protein [Cucumis melo][more]
gi|449437808|ref|XP_004136682.1|9.1e-8787.71PREDICTED: lamin-like protein [Cucumis sativus][more]
gi|703073526|ref|XP_010089568.1|8.8e-6672.13Lamin-like protein [Morus notabilis][more]
gi|743879081|ref|XP_011035820.1|4.4e-6571.35PREDICTED: lamin-like protein [Populus euphratica][more]
gi|224141443|ref|XP_002324082.1|4.4e-6570.76plastocyanin-like domain-containing family protein [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003245Phytocyanin_dom
IPR008972Cupredoxin
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron carrier activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0022900 electron transport chain
cellular_component GO:0005575 cellular_component
cellular_component GO:0046658 anchored component of plasma membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0009055 electron carrier activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU06851watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU08363watermelon EST collection version 2.0transcribed_cluster
WMU54835watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla016968Cla016968.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU06851WMU06851transcribed_cluster
WMU08363WMU08363transcribed_cluster
WMU54835WMU54835transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003245Phytocyanin domainPRODOMPD003122coord: 65..140
score: 6.0
IPR003245Phytocyanin domainPFAMPF02298Cu_bind_likecoord: 42..124
score: 3.2
IPR003245Phytocyanin domainPROFILEPS51485PHYTOCYANINcoord: 32..132
score: 35
IPR008972CupredoxinGENE3DG3DSA:2.60.40.420coord: 31..137
score: 3.2
IPR008972CupredoxinunknownSSF49503Cupredoxinscoord: 31..130
score: 7.63
NoneNo IPR availablePANTHERPTHR33021FAMILY NOT NAMEDcoord: 5..154
score: 3.7
NoneNo IPR availablePANTHERPTHR33021:SF63LAMIN-LIKE PROTEINcoord: 5..154
score: 3.7