Csa3G812210 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCACAAACAAACTCTATAATCTCAGATAAATTGTTGCTATGTGTAGTAGACGTTTGAATCCTTAGTGGGCACCAAATTAGAACTAGAAGGGAGAAAAATTAAAATATCATTTTGAACCCTATAGTTTGAATTTGTTCCATTTTTATATTCAAATGCTTGTTTTTCAATACGATCAAACTAACCAAAAACTTTTCGAAAGTGCATGCTCTTTTCTAGAATCTGAAGGAACTCAACTAGCCGATTAGATTAAGCCATGGCTTCAACAGCATCAACGGTAGAATCGAGTGATTTGGATGTTTCTCAGTTCCGCCATACTCCTTTCTACTGGTAATCAATCGAACCATTGCCTTCACAATCTGAATTATTATCTATTTTGTCGTGTTTCTTTGTTCTTAAACATGGGTTTTTTTTTAAAAAAAAATCTTCAATGTGTTCTTTTAACGATATGCTGCTAAAATTTCCCATATCCCAAAATGACCAAAGAAAGAAGATGGAATGCAGAAGACAAGACTAAAATTTCTTGCCGATTTATTCTTCCGACACCCTTTTTGAAGTGTAATTTTTATGGAACTGTGGACTTGAGTCTAAACAACGGCAAGAAATTACTTTAGTTGGCAGTTCTAACAATATTTGAACTGCGCTGGAATTGAATTGAATAGGGTATATTTTTTAAATATGAAGTTTCATACTTGTAGTACAGCCACAACGGAATGGAAGATCAGCTTTGAAGTATTTTTGTATTTTCAATTTTGCAGTGAGGAGAATGTTTATTTTCTATGCAAGAAATTATGTACAAACAGATTGGCTGATGCAGAGGGAGCTGATCTTTTTGTTGTTTTCATTTCTAATGAGAAGAAGCAGGCACGTATGTTGTTTCTCTGGTATTTTAGCCATTTCTGAGGATAAGTAAGTTTTGCTAAATCAGTGCTCGTTCTTGTTACTATTCAAAGTGTCATTTCTAGTCATTGGTAGACTTAGGTTCGATAATGATGGCATGATTCGAGAGAAATTGTACTCGTGCTCTTTGTTAGAAAGGAATGGGAAAGCTGTTTTGAATGGTAGAAGGTGGTCGAAAACATTTGGCACTTCCTAATTTTTAGGAGATCTTCTAGTTTTGTAATTACCCAATCTCTAAGATAGCTACCATTTTGGATGGACTTTTTACCTTTTGGCATAGGAGTCCATGAAATATTTCTCTTGTTTCTCTTTTCATTTCCTTCTATCAATGAGGAATCTTTTTTTTGTTTCTTATTTCAAAGAAATGTTTGCTCTGCAAGCAAGATTAGTTTCAAGCCTGGTACCGATTATGTTGTTCATGTCATTTGATAACATCTAGTTAAATTCATCTTTCTTTGAGTGAAATCCTTGTTTACTAATTAAAAGCCTAACTTCCCCCACCCCTCAAAAAAATTTGTTTAGATTCCCCTTTGGCATCAGAAAGCCAGCAAAAGGGCAGATGGTCTTGTTTTGTGGGATTACCATGTCATTTGCATTCAGGTAAGACACAGTCTAGTCTATCCTACTTTAACAATTGCTGTTTGAGTCATAATCACCTATTGAGTTGCATTAGAACTTTATTTTGATCATTGCTGCAAGCTTTTCTTGTTTTTTTACTTTTAAGATGTTGAGTTCATTTCAATTGACAGAGAAAGATAGAAGGTGAATTTCCTTTTTTAGTGTGGGATTTAGACTCAACTCTTCATTTACCTCTCCCTCTGGGCAGCTATGTGTCACAAGCTATCAGGCCATCATTTCAAATCTCCCCTGAGTATCAAAGGTAGAACCTGTTAGCTACAACTCATTTTTTTAATGCATATGTTCACAATTATCTTGTCGTTGAATTTTATTGGTTGAAAACATTTGGGGTGAGTGTTCTTAAATGTAGTGAGATACAGATTTTTCACTTTTCAAGTACCATCACGAGGATCTGGCAAGCACAAGCACACCCTGCTAGAATTTTGAAAGACTCTAGAAGCGGAGTCTAGGAGCACTACATCAAGTGAAGTCTATACTTCGAAATTTTATTATGTTGGTATTATAATTGGGCTAATCTAATAATGATTCCTAGTTGTTATTCTCCATATTGATCCAACTTTAAGTTTGACACTAATGTTCTACTCAAAACTGTTTTGCAAAAGTCTCTGTCTATCAAAAGAAATAGAATTGGTATTGCAATGATCTTGTAGTGTGTTAATAAAGGTTTCTCAATTTAGAAGGCAGTCATTTCTTTGTGAAGTGTAATTCAAGCTTAAAATACTTATACTGTTTGTCAAAATTTTAATAAAAACCTGCTATTTTCTGGGGACAGGCTTTTCAGAATCATTCATGCTCCAATACTTTTTCGTCACTTTGCATCTGATAGAAGGCACATGAAAGATTCAAATGGAAATTGGATGGCTAAACCTCCTGACTATGAAGCCATTGTTGCCGAAGGTAAGAGTACTAGCTCCTGATGAGTAATCAATTTAGCCTGTCATGTTTCTCTATCCTTGAAAAATAGTCTTCTTGGGGCCTCAACTGCCATGTTCATGCACGGTTTTTTTGTTTTGATGATATCTTGTTTGTGACATGCTTCTGGAAAAAAAATGGTAAAAAACTGCATTGAAAAACTTATAACTTTTAAATTGTTCATCAACGATCCTAGAAAATTACATGCCAACATAAAAGACAATGGATGCATGCTTTGTTTTTTCATGGCTTACTTGGTGATGCTTTGTTTAATCAATTAAGAATGTTGTTAGGATACCGCCTAACAAGAACAGTCGAGAATAACACAGAAAACTTAAGAACACTCAAATATAGAAGTATGCTGTAATATTATAAGAAAAGTAACCTATCCTAGCCTTTTGAGAGGGCTAGTCTCTTTCAAAGTTCTTCGCCCCTCAAGCCTCACTCTCACTTATTTATGACCCAAAAAACCAAACAAGCTTGATGTCTAATTACTAGAATGCTCTTTACTACCAATAATACCAACTATCCAAACTAGGGGTCCAATATATATATTAGTAATTGGTTAGGAGAGTTGATTATGGAATTTGGTTATAATCAGAGAAAAGGAGAATATGAAAAATGGGTAATATTGTGGTGAGTGAATTCTGGCTTGAGATTGGTCTCAACATTTGGAGGGCCAAGTACCTCGAAAACATGGTTATCGTGTTTCTTTCAGTATATTTGGGTTCTATCGTATTCTCATTGGTAACATTTGTGTAAGAATCCATATTGAGGATTTTATAGATCATGAGAACATTGAAAGGAAACATCAAATTGGTGGGTATATTTTATATCATAGTAGTTTGAGATGCTTCACCCATCAAAAGGAATTGATTGGGACTAAGAATGGGGCTCTTGCTTGATATAGTTTGTCAAGAATTCATCATCAAAAGGATAACTTGGGAAAGATTTGTTCATGGTTCAAAACTTTGTTATAAATTGTTAGAATGTCTTGAATCTGTTATCTGACGTTTTGAATGACCAAGCACAAATTTGGCTAAATTCAATTTGAAAGTTTACCAGTAATTTACATGTTGATTGTGGCCATGTCATTCAACTTGTCCATTAATTACAAACTCTCTAAGTTGTCTTAACTGGAATTGATTCCTATCTACTGCCTCTCTTTTAGAATATTTATCGATTGGCCTTTGGCTTTAATTGATCTTCTTTCATTGTTTCCTCTTGTACTGTCTTGGGTATCAGATGGAACTATGCACAACCTATATGAGTATATGGAAATCAAGACAGGCGATGTTTATTCGAACAAAACCATTGATGTGAAAGATGCAGTTTTTTCTCAAAAACTTGGAGCGGTCGCAAATAATTTAGAGGAGTTTTTCACTCAAATTCTTTAAATAGGATTGAAAAAAATTCTGGTAAGTTTCTAAAAATTTATGTTCTTGGTTTTCTATACATGCACTAAAAATTTGAAGATTGCTAGAAAGTTGAGTTGTCTGGCATTGCTTTACCCTAAAATCTGGAGCTGCTTTC ATGGCTTCAACAGCATCAACGGTAGAATCGAGTGATTTGGATGTTTCTCAGTTCCGCCATACTCCTTTCTACTGTGAGGAGAATGTTTATTTTCTATGCAAGAAATTATGTACAAACAGATTGGCTGATGCAGAGGGAGCTGATCTTTTTGTTGTTTTCATTTCTAATGAGAAGAAGCAGATTCCCCTTTGGCATCAGAAAGCCAGCAAAAGGGCAGATGGTCTTGTTTTGTGGGATTACCATGTCATTTGCATTCAGAGAAAGATAGAAGGTGAATTTCCTTTTTTAGTGTGGGATTTAGACTCAACTCTTCATTTACCTCTCCCTCTGGGCAGCTATGTGTCACAAGCTATCAGGCCATCATTTCAAATCTCCCCTGAGTATCAAAGGCTTTTCAGAATCATTCATGCTCCAATACTTTTTCGTCACTTTGCATCTGATAGAAGGCACATGAAAGATTCAAATGGAAATTGGATGGCTAAACCTCCTGACTATGAAGCCATTGTTGCCGAAGATGGAACTATGCACAACCTATATGAGTATATGGAAATCAAGACAGGCGATGTTTATTCGAACAAAACCATTGATGTGAAAGATGCAGTTTTTTCTCAAAAACTTGGAGCGGTCGCAAATAATTTAGAGGAGTTTTTCACTCAAATTCTTTAA ATGGCTTCAACAGCATCAACGGTAGAATCGAGTGATTTGGATGTTTCTCAGTTCCGCCATACTCCTTTCTACTGTGAGGAGAATGTTTATTTTCTATGCAAGAAATTATGTACAAACAGATTGGCTGATGCAGAGGGAGCTGATCTTTTTGTTGTTTTCATTTCTAATGAGAAGAAGCAGATTCCCCTTTGGCATCAGAAAGCCAGCAAAAGGGCAGATGGTCTTGTTTTGTGGGATTACCATGTCATTTGCATTCAGAGAAAGATAGAAGGTGAATTTCCTTTTTTAGTGTGGGATTTAGACTCAACTCTTCATTTACCTCTCCCTCTGGGCAGCTATGTGTCACAAGCTATCAGGCCATCATTTCAAATCTCCCCTGAGTATCAAAGGCTTTTCAGAATCATTCATGCTCCAATACTTTTTCGTCACTTTGCATCTGATAGAAGGCACATGAAAGATTCAAATGGAAATTGGATGGCTAAACCTCCTGACTATGAAGCCATTGTTGCCGAAGATGGAACTATGCACAACCTATATGAGTATATGGAAATCAAGACAGGCGATGTTTATTCGAACAAAACCATTGATGTGAAAGATGCAGTTTTTTCTCAAAAACTTGGAGCGGTCGCAAATAATTTAGAGGAGTTTTTCACTCAAATTCTTTAA MASTASTVESSDLDVSQFRHTPFYCEENVYFLCKKLCTNRLADAEGADLFVVFISNEKKQIPLWHQKASKRADGLVLWDYHVICIQRKIEGEFPFLVWDLDSTLHLPLPLGSYVSQAIRPSFQISPEYQRLFRIIHAPILFRHFASDRRHMKDSNGNWMAKPPDYEAIVAEDGTMHNLYEYMEIKTGDVYSNKTIDVKDAVFSQKLGAVANNLEEFFTQIL*
BLAST of Csa3G812210 vs. Swiss-Prot
Match: NTAQ1_ARATH (Protein N-terminal glutamine amidohydrolase OS=Arabidopsis thaliana GN=At2g41760 PE=1 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 2.9e-74 Identity = 130/216 (60.19%), Postives = 163/216 (75.46%), Query Frame = 1
BLAST of Csa3G812210 vs. Swiss-Prot
Match: NTAQ1_ORYSI (Protein N-terminal glutamine amidohydrolase OS=Oryza sativa subsp. indica GN=OsI_19806 PE=3 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 1.5e-59 Identity = 117/211 (55.45%), Postives = 144/211 (68.25%), Query Frame = 1
BLAST of Csa3G812210 vs. Swiss-Prot
Match: NTAQ1_ORYSJ (Protein N-terminal glutamine amidohydrolase OS=Oryza sativa subsp. japonica GN=Os05g0387900 PE=2 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 5.8e-59 Identity = 116/211 (54.98%), Postives = 144/211 (68.25%), Query Frame = 1
BLAST of Csa3G812210 vs. Swiss-Prot
Match: NTAQ1_BOVIN (Protein N-terminal glutamine amidohydrolase OS=Bos taurus GN=WDYHV1 PE=1 SV=2) HSP 1 Score: 133.7 bits (335), Expect = 2.6e-30 Identity = 71/172 (41.28%), Postives = 100/172 (58.14%), Query Frame = 1
BLAST of Csa3G812210 vs. Swiss-Prot
Match: NTAQ1_RAT (Protein N-terminal glutamine amidohydrolase OS=Rattus norvegicus GN=Wdyhv1 PE=2 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 3.3e-30 Identity = 69/183 (37.70%), Postives = 107/183 (58.47%), Query Frame = 1
BLAST of Csa3G812210 vs. TrEMBL
Match: A0A0A0LEK5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G812210 PE=4 SV=1) HSP 1 Score: 456.4 bits (1173), Expect = 1.9e-125 Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 1
BLAST of Csa3G812210 vs. TrEMBL
Match: V4S2Y1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005859mg PE=4 SV=1) HSP 1 Score: 303.5 bits (776), Expect = 2.1e-79 Identity = 146/213 (68.54%), Postives = 169/213 (79.34%), Query Frame = 1
BLAST of Csa3G812210 vs. TrEMBL
Match: A0A061EVZ1_THECC (N-terminal glutamine amidohydrolase isoform 1 OS=Theobroma cacao GN=TCM_024634 PE=4 SV=1) HSP 1 Score: 299.7 bits (766), Expect = 3.0e-78 Identity = 142/220 (64.55%), Postives = 169/220 (76.82%), Query Frame = 1
BLAST of Csa3G812210 vs. TrEMBL
Match: B9H9V0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s05000g PE=4 SV=2) HSP 1 Score: 299.3 bits (765), Expect = 3.9e-78 Identity = 147/212 (69.34%), Postives = 171/212 (80.66%), Query Frame = 1
BLAST of Csa3G812210 vs. TrEMBL
Match: A0A0D2NSF8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G136400 PE=4 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 1.5e-77 Identity = 140/222 (63.06%), Postives = 175/222 (78.83%), Query Frame = 1
BLAST of Csa3G812210 vs. TAIR10
Match: AT2G41760.1 (AT2G41760.1 unknown protein) HSP 1 Score: 279.6 bits (714), Expect = 1.6e-75 Identity = 130/216 (60.19%), Postives = 163/216 (75.46%), Query Frame = 1
BLAST of Csa3G812210 vs. NCBI nr
Match: gi|778684942|ref|XP_011652127.1| (PREDICTED: protein N-terminal glutamine amidohydrolase isoform X1 [Cucumis sativus]) HSP 1 Score: 456.4 bits (1173), Expect = 2.8e-125 Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 1
BLAST of Csa3G812210 vs. NCBI nr
Match: gi|659084891|ref|XP_008443128.1| (PREDICTED: protein N-terminal glutamine amidohydrolase isoform X1 [Cucumis melo]) HSP 1 Score: 436.4 bits (1121), Expect = 3.0e-119 Identity = 212/221 (95.93%), Postives = 215/221 (97.29%), Query Frame = 1
BLAST of Csa3G812210 vs. NCBI nr
Match: gi|778684945|ref|XP_011652128.1| (PREDICTED: protein N-terminal glutamine amidohydrolase isoform X2 [Cucumis sativus]) HSP 1 Score: 341.3 bits (874), Expect = 1.3e-90 Identity = 166/193 (86.01%), Postives = 173/193 (89.64%), Query Frame = 1
BLAST of Csa3G812210 vs. NCBI nr
Match: gi|659084893|ref|XP_008443129.1| (PREDICTED: protein N-terminal glutamine amidohydrolase isoform X2 [Cucumis melo]) HSP 1 Score: 328.6 bits (841), Expect = 8.7e-87 Identity = 160/193 (82.90%), Postives = 171/193 (88.60%), Query Frame = 1
BLAST of Csa3G812210 vs. NCBI nr
Match: gi|1009160072|ref|XP_015898159.1| (PREDICTED: protein N-terminal glutamine amidohydrolase isoform X2 [Ziziphus jujuba]) HSP 1 Score: 307.0 bits (785), Expect = 2.7e-80 Identity = 144/213 (67.61%), Postives = 174/213 (81.69%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|