Carg03538 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAAATGGGTTTGCTCGAAAGCAATCTCGCTCGAAAATGGGAACTGATTTCTGAAAGAACTTCGTTTTCCCAAGGGATTCAGGCTCTAGCCGATTGAGCCATGGCTTCCACACTATCAACTGTAGAATCGATTGATTTGGACGTTTCTCAGTTCTGCCATACGCCTTTTTACTGGTAATCAATCGACGATCCTTTTGGTTCATCTGCTGAATCCTTCGTGTGAATTATTCTCTATTTTATCATTGTTTCTCTGTTCTTGTACATTTTTTTTTGTTAATATCTTCATGAGGTTCTTCTTACGATATGCTGCGAAAATTTCTCCGGAATCGGATAGGGTATATTTATTAATAATGGAGATTCATACTTATAATACAGTCTTGAATTCGTGTTTCTAAAATGCTGAAGAGGATTTATTGTGGGCTCGATCCTAGGTTTTTGACCTCACAGCGCTGACGAAAAGGAAGTGTAATTAAGTGTTTCGTGCTTTCGATTTTGCAGTGAGGAGAACGTATATTTTCTATGCAAGAAATTATGTACAAACAGAATGGATGATGCAACGGGAGCTGATCTTTTTGTTGTTTTCATTTCTAATGAGAAGAAGCAGGCACGTATGTTATTCTTTCTCTAGTGATTTGGCCATTTCTGAGGATGAATCAGTTCTGCTAAATGACTCTAGGCATTTCTTATTGCTATTCGAAGTATCATTTTTGGCCATTGGTAGCCCTAGGTTTAATAGTGATATTGTGAGATCTCACATTGGTTGGAGAGGAGGAACGAAACATTCTTTATAAGAGTGTGGAAACCTCTCCCTAGTAGACACGTTTTAAAATCGTGAGGTCGACGGCGATACGTAACGGGCCAAAGCGGACAATATTTGCTGGCAGTGAGCTTGGGCTGTTATAGATGGTATCAGAGTCGAGCACCGAACGGTGTGTCAGCGAGGACGCTGGCCCCCCAAGGGGGGTGGATTGTGAGATCCTACATTGGTTGAGGGGAACGAAGCACGCCTTATAAGGGTGTGGAAACCTCTCCCTAGCGTACGCTTTTTAAAACCGTGAGGCTGACAGCGATATGCAATGGGCCAAAGCGGATAATATTTGTTAGTGGCGAGCTTGAGCTGTTACAATGGTATCAGAGTCAGACATCGAACGGTGTGCCAGCAAGGACATTGGGCCCCAAGGGGGTGGATTGTGAGATCTCACATGGTTGAAGAGAGGAACGAAGCATTCTTATAAGGGTGTGGAAACCTCTCCCTAGCATACGCGTTTTAAAACCATGAGGCTGACGACGATATGTAACGGGCCAAGTCGAATAATATTTGCTAGTGTTGGGCTTGGGCTTGGGCTGTTACAGATACGAAGATTCTTGAGGAATTCTATTCATGTTCTCTTATCGGAAGTTCATAGAAAGAAACAGAAAGCTGTTTAGAATAGTAGAAGACGGTTAAAAACATTTGGCACCTCGTAGTTTTCATTGTTTCCTGTTGGAGTTCCCCTTCTAATTCATTTTTGTAACTACACAGTCTCTTGTGTAGCTCTCACTTGGATGTGATTTTTAATCTTTTGCCCTACGGGTTTCTGAAAGGCTTCTCTTGTTTCTCTTTTCATTTTATTTTATCAATGAAATTGTTGTCTTGTTTCTTATTGCAAATGAAGTATTTGCTCTCGAACAAGATTACTCTTAAGCCCGGTATTGATCATTTTGTTCAGGTTAGATAAAATTTTGTTAAAATTCCTCTTTTCCTGAGTGAAATCCTTGTTAACAAATTATAATTCTAACTCCTCCCACTCCCCCAAAAAAATTGTTTAGATTCCCCTTTGGCATCAAAAAGCCAGCAAAAGAGAAGATGGTCTTGTTTTGTGGGATTACCATGTGATTTGCGTTCAGGTAAGATAGTCTATCCTGCTTTAATAATAGTTGTTCGTGTCGTAATTACTCAGCAAGTTGCATCAGATCTTTATTTTGATCATTGTTGCAAGCTTTTATTGTTTTCTACTTTTGAGATGTTGAGCTCATTTCAATTGACAGAGAAAAACAGAAGGTGAATTTCCTTTTATAGTGTGGGATTTAGACTCCACTCTTCCTTTACCTATCCCTCTGGGCAGCTACGTGTCGCAAGCTATCAGGCCATCGTTTCAAATCTCCCCTGAGTATCAAAGGTAAAGCCCGTCAGCTACAACTTTTTTTTTTCTAATGCATACGTCACAATTATCAGGTCGTTGCATTTTATTGGTTGAAAAACATTTGGGACTATGTGTTCTTAAAAGTGTAACTCAAGCTTGACTCATATTGATCAAATTTTTAATCAAAAGCTGCTATTCCTGGGGACAGGCTTTTCAGAATCATCCATGCTCCAATATTTTTTCGTCACTTCGCATCTGATAGAAGGCACATGAAAGATTCCAATGGAAATTGGATTGCTAAACCCCCTGACTATGAAGCCATTGTTGCTGAAGGTAAATGCCTGCCCCTAATGGGTAATCAAATATCATGTTCATGTACGCCGTTGATGCATTGTTTGTTTTGATGATAAACTGGTTGGTGATTGCTTCTGAGTTTCATTTTTATTTATTTGTTTGTTTATTTTATTATTTTTTGGCGAAGAACTGTGTTGAAAAACTTGAGAACTCTTAAATTGGGCATTAACGATTCTGGAAAATTACGTGTTGAATAAAACACCATGGTTGCATGCTTTGCTTTGTCACTTATTTGTCTTAAGTGGATCAATTTCTAGACTAGGCTTCCCTACCATATTTGATAGGAGTTTTAGGAACTAGAAAGCTTACTATTGGTTTAAATGATGATTGTGGCTATGTCATCCAACCTGTCTATTAATTGTGAACTCTCTAAGCTGTCTTCTTAGGCGTCTCTCTTGGGTTGTGAGGTGAACATTTGGCCTTGGTCCCGGAAAAGTTTAAAAAATGTCTCTCCTCTTGGAGAAATGCCTTTTTTTTTTTTTCAAGCGAGGGAGAGTTACCTTGTAACGGCCCAAACCCATTGCTAGCAGGCATTGTCCTATTTAGGCTTTCCCTTTTGAGTTTCCCCTCAAGGTTTTTAAAACGCGAGTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTCATTCTCCTCCCCAACTGATGTGGGATCTCACAATCCACCCCCTTCAGGGTCCAGCATCCTCACTGACACTCATTCCCTTCTCCAATTGATGTGGGACCCTCAATCCAACCCCTTTGGGGCCAGCGTCCTTGTTGGCACACCATTTCATGTCCACCCCCTTTGAGGCTTAGCCTCCTTGCTAGCACATCACCCGGTATCTGGCTCTGATACCATTTGTAACGGTCCAAGCCCACCACTAGCAGTATTGTCCTCTTTAGGCTTTTCCTTTTGAGCTTTCCCTCAAGGTTTTCGAGGTTCTTAAAACGCGTCCGCTAGGGAGAGGTTTCCACGTTCTTACAAAGAATGTTTCGTTCTTCTCCCTAATCGATGTGAGATCCCACATGGAAGAAACTATTAATTTTGATTTTTAGTTTATTGTTCAAAACCAGTTTTGAAGTTTGAAATCTAAAATGTTTCTAGATAGAATATCTATTGAATGTCCTTGGCTTTACTTGTTTGAACTCAAGGTTGACGACGATATTCTTTTGATGTTTCCTCATGTACTGTCCTGGATATCAGATGGAACTATTCACAACCTGTATGAGTACATGGAGATCAAGGCGGCCGATGTATTTACGAACAACATCGATGTGAAAGATGCAGTTTTTTCTCAAAAACTTGGAGCGGTCGCAAATGATCTGGAGGAGTTTTTCTCACAAATTCTTTAAACAAGAATGAGAAAGATCTGGTATGCATCTGAAAGGTTATGTTTCCCTCTCTATACTTGAAACTTGAAAGTCTGATGATTACTTGAAAGTTGGGTTCAATGCATTGTTTTACCCTGAAAAACCCTGGAGCTGCTTTCTCAAATTAGGAATTTTATAGTCATTTATTAAGTTTATGCGGTTGCTTATGCATGTAGTGATACTGACTGGGGTCCTGGGGATGGATTATCGTGCTACCTCTCTAGAGTTCAGCCCATTGGAACCGGTTGCTAACTTGTAAGATATTTTTAATAATCACTTTCAAGGCCCTCCCAGGAAGGAGGAGAGAAATTTTAAAATAATCTTTTGATTCGGGATTTTGAAAACCATGTGTCACGGTTGTACTTTTTCAACCGTGCGGCGTCGTGATCTTGACACGCTCACGACCAGCCTTAAGGG GAAAAATGGGTTTGCTCGAAAGCAATCTCGCTCGAAAATGGGAACTGATTTCTGAAAGAACTTCGTTTTCCCAAGGGATTCAGGCTCTAGCCGATTGAGCCATGGCTTCCACACTATCAACTGTAGAATCGATTGATTTGGACGTTTCTCAGTTCTGCCATACGCCTTTTTACTGTGAGGAGAACGTATATTTTCTATGCAAGAAATTATGTACAAACAGAATGGATGATGCAACGGGAGCTGATCTTTTTGTTATTCCCCTTTGGCATCAAAAAGCCAGCAAAAGAGAAGATGGTCTTGTTTTGTGGGATTACCATGTGATTTGCGTTCAGAGAAAAACAGAAGGTGAATTTCCTTTTATAGTGTGGGATTTAGACTCCACTCTTCCTTTACCTATCCCTCTGGGCAGCTACGTGTCGCAAGCTATCAGGCCATCGTTTCAAATCTCCCCTGAGTATCAAAGGCTTTTCAGAATCATCCATGCTCCAATATTTTTTCGTCACTTCGCATCTGATAGAAGGCACATGAAAGATTCCAATGGAAATTGGATTGCTAAACCCCCTGACTATGAAGCCATTGTTGCTGAAGATGGAACTATTCACAACCTGTATGAGTACATGGAGATCAAGGCGGCCGATGTATTTACGAACAACATCGATGTGAAAGATGCAGTTTTTTCTCAAAAACTTGGAGCGGTCGCAAATGATCTGGAGGAGTTTTTCTCACAAATTCTTTAAACAAGAATGAGAAAGATCTGGTATGCATCTGAAAGGTTATGTTTCCCTCTCTATACTTGAAACTTGAAAGTCTGATGATTACTTGAAAGTTGGGTTCAATGCATTGTTTTACCCTGAAAAACCCTGGAGCTGCTTTCTCAAATTAGGAATTTTATAGTCATTTATTAAGTTTATGCGGTTGCTTATGCATGTAGTGATACTGACTGGGGTCCTGGGGATGGATTATCGTGCTACCTCTCTAGAGTTCAGCCCATTGGAACCGGTTGCTAACTTGTAAGATATTTTTAATAATCACTTTCAAGGCCCTCCCAGGAAGGAGGAGAGAAATTTTAAAATAATCTTTTGATTCGGGATTTTGAAAACCATGTGTCACGGTTGTACTTTTTCAACCGTGCGGCGTCGTGATCTTGACACGCTCACGACCAGCCTTAAGGG ATGGCTTCCACACTATCAACTGTAGAATCGATTGATTTGGACGTTTCTCAGTTCTGCCATACGCCTTTTTACTGTGAGGAGAACGTATATTTTCTATGCAAGAAATTATGTACAAACAGAATGGATGATGCAACGGGAGCTGATCTTTTTGTTATTCCCCTTTGGCATCAAAAAGCCAGCAAAAGAGAAGATGGTCTTGTTTTGTGGGATTACCATGTGATTTGCGTTCAGAGAAAAACAGAAGGTGAATTTCCTTTTATAGTGTGGGATTTAGACTCCACTCTTCCTTTACCTATCCCTCTGGGCAGCTACGTGTCGCAAGCTATCAGGCCATCGTTTCAAATCTCCCCTGAGTATCAAAGGCTTTTCAGAATCATCCATGCTCCAATATTTTTTCGTCACTTCGCATCTGATAGAAGGCACATGAAAGATTCCAATGGAAATTGGATTGCTAAACCCCCTGACTATGAAGCCATTGTTGCTGAAGATGGAACTATTCACAACCTGTATGAGTACATGGAGATCAAGGCGGCCGATGTATTTACGAACAACATCGATGTGAAAGATGCAGTTTTTTCTCAAAAACTTGGAGCGGTCGCAAATGATCTGGAGGAGTTTTTCTCACAAATTCTTTAA MASTLSTVESIDLDVSQFCHTPFYCEENVYFLCKKLCTNRMDDATGADLFVIPLWHQKASKREDGLVLWDYHVICVQRKTEGEFPFIVWDLDSTLPLPIPLGSYVSQAIRPSFQISPEYQRLFRIIHAPIFFRHFASDRRHMKDSNGNWIAKPPDYEAIVAEDGTIHNLYEYMEIKAADVFTNNIDVKDAVFSQKLGAVANDLEEFFSQIL
BLAST of Carg03538 vs. NCBI nr
Match: XP_023527265.1 (protein N-terminal glutamine amidohydrolase isoform X1 [Cucurbita pepo subsp. pepo] >XP_023527266.1 protein N-terminal glutamine amidohydrolase isoform X1 [Cucurbita pepo subsp. pepo] >XP_023527267.1 protein N-terminal glutamine amidohydrolase isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 433.7 bits (1114), Expect = 3.5e-118 Identity = 209/220 (95.00%), Postives = 211/220 (95.91%), Query Frame = 0
BLAST of Carg03538 vs. NCBI nr
Match: XP_022935429.1 (protein N-terminal glutamine amidohydrolase isoform X2 [Cucurbita moschata]) HSP 1 Score: 431.4 bits (1108), Expect = 1.8e-117 Identity = 208/220 (94.55%), Postives = 210/220 (95.45%), Query Frame = 0
BLAST of Carg03538 vs. NCBI nr
Match: XP_022935426.1 (protein N-terminal glutamine amidohydrolase isoform X1 [Cucurbita moschata] >XP_022935427.1 protein N-terminal glutamine amidohydrolase isoform X1 [Cucurbita moschata] >XP_022935428.1 protein N-terminal glutamine amidohydrolase isoform X1 [Cucurbita moschata]) HSP 1 Score: 424.5 bits (1090), Expect = 2.1e-115 Identity = 208/238 (87.39%), Postives = 210/238 (88.24%), Query Frame = 0
BLAST of Carg03538 vs. NCBI nr
Match: XP_022983091.1 (protein N-terminal glutamine amidohydrolase isoform X2 [Cucurbita maxima]) HSP 1 Score: 422.9 bits (1086), Expect = 6.2e-115 Identity = 205/220 (93.18%), Postives = 206/220 (93.64%), Query Frame = 0
BLAST of Carg03538 vs. NCBI nr
Match: XP_022983089.1 (protein N-terminal glutamine amidohydrolase isoform X1 [Cucurbita maxima] >XP_022983090.1 protein N-terminal glutamine amidohydrolase isoform X1 [Cucurbita maxima]) HSP 1 Score: 416.0 bits (1068), Expect = 7.6e-113 Identity = 205/238 (86.13%), Postives = 206/238 (86.55%), Query Frame = 0
BLAST of Carg03538 vs. TAIR10
Match: AT2G41760.1 (unknown protein) HSP 1 Score: 260.8 bits (665), Expect = 7.4e-70 Identity = 122/216 (56.48%), Postives = 158/216 (73.15%), Query Frame = 0
BLAST of Carg03538 vs. Swiss-Prot
Match: sp|O22944|NTAQ1_ARATH (Protein N-terminal glutamine amidohydrolase OS=Arabidopsis thaliana OX=3702 GN=At2g41760 PE=1 SV=1) HSP 1 Score: 260.8 bits (665), Expect = 1.3e-68 Identity = 122/216 (56.48%), Postives = 158/216 (73.15%), Query Frame = 0
BLAST of Carg03538 vs. Swiss-Prot
Match: sp|B8AXU2|NTAQ1_ORYSI (Protein N-terminal glutamine amidohydrolase OS=Oryza sativa subsp. indica OX=39946 GN=OsI_19806 PE=3 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 7.6e-56 Identity = 111/209 (53.11%), Postives = 137/209 (65.55%), Query Frame = 0
BLAST of Carg03538 vs. Swiss-Prot
Match: sp|Q60E61|NTAQ1_ORYSJ (Protein N-terminal glutamine amidohydrolase OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0387900 PE=2 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 2.9e-55 Identity = 110/209 (52.63%), Postives = 137/209 (65.55%), Query Frame = 0
BLAST of Carg03538 vs. Swiss-Prot
Match: sp|Q5BJV9|NTAQ1_RAT (Protein N-terminal glutamine amidohydrolase OS=Rattus norvegicus OX=10116 GN=Wdyhv1 PE=2 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 4.4e-27 Identity = 58/162 (35.80%), Postives = 98/162 (60.49%), Query Frame = 0
BLAST of Carg03538 vs. Swiss-Prot
Match: sp|Q80WB5|NTAQ1_MOUSE (Protein N-terminal glutamine amidohydrolase OS=Mus musculus OX=10090 GN=Wdyhv1 PE=1 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 9.7e-27 Identity = 58/162 (35.80%), Postives = 97/162 (59.88%), Query Frame = 0
BLAST of Carg03538 vs. TrEMBL
Match: tr|A0A0A0LEK5|A0A0A0LEK5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G812210 PE=4 SV=1) HSP 1 Score: 390.2 bits (1001), Expect = 3.0e-105 Identity = 189/221 (85.52%), Postives = 199/221 (90.05%), Query Frame = 0
BLAST of Carg03538 vs. TrEMBL
Match: tr|A0A1S3B7D0|A0A1S3B7D0_CUCME (protein N-terminal glutamine amidohydrolase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486813 PE=4 SV=1) HSP 1 Score: 388.7 bits (997), Expect = 8.6e-105 Identity = 187/221 (84.62%), Postives = 199/221 (90.05%), Query Frame = 0
BLAST of Carg03538 vs. TrEMBL
Match: tr|A0A1S4DUJ1|A0A1S4DUJ1_CUCME (protein N-terminal glutamine amidohydrolase isoform X3 OS=Cucumis melo OX=3656 GN=LOC103486813 PE=4 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 5.6e-80 Identity = 143/160 (89.38%), Postives = 153/160 (95.62%), Query Frame = 0
BLAST of Carg03538 vs. TrEMBL
Match: tr|A0A1S3B817|A0A1S3B817_CUCME (protein N-terminal glutamine amidohydrolase isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486813 PE=4 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 5.6e-80 Identity = 143/160 (89.38%), Postives = 153/160 (95.62%), Query Frame = 0
BLAST of Carg03538 vs. TrEMBL
Match: tr|A0A0B0P6R6|A0A0B0P6R6_GOSAR (Uncharacterized protein OS=Gossypium arboreum OX=29729 GN=F383_07542 PE=4 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 4.2e-75 Identity = 136/202 (67.33%), Postives = 163/202 (80.69%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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