Csa3G469700 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa3G469700
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Bet1-like snare 1-1; contains IPR000727 (Target SNARE coiled-coil domain)
Location	Chr3 : 20927711 .. 20931222 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTATTTATTTGTGTTATGTATATTTTATTTTTCCAACTAAGCTGAAATTCTGGCCGAAGAAGAACGCTTTTCGTTGAACTGAGCCCCCGTGATGAGTTACAGAAGGTTCGTATCCAAATTCTTCGTCGATGTACACACTTTACTTTGTTTTACTTAACTATACCACCACTCTGCCTTCCATTACTGTCTCAATTTTCTGATTTCTGCCTTCTTTTGTTGTTATTTTCATTCATCAGCTCCCTCAAGTTGCTTGCTTCTATGAATTGGTTCTGATCTTGTGTTATAATTCCATTATGATTTAAGTCTGAGTTCTTAATCAACAATTTGGCTTAAAATGGTATGAAATAAACAGTAGATCGCTGTATCAATTCGTACGGTAGGATATGGCTTTTCGATCTGGTTGCATATCCCTGACACACACAAGTGTGTGAATCCTATGACGACTTGAAAAAATCTACAACTTTATATTAGCTTTCCATTTCCTTCTTTGGTTTTGAGTTTTTATTCGAGTTTTGAATAGTAATTTGACTGAAAGCATAATGAAGGTCAAATATCTTCTCAATTCTGGAATCCTGGATGTTAGGTTTCTTTCTCCTTGCTAACATTGAGTTAAATTGTAGCCATTTTCTTCTTCTACTACTTAAAATTTGTTAGACATAAACATTGGTATTGTTCTTGGATATCACTGTCTCTCCTTGTATAAGAATTTGTATATTGTTTCGTTTGAAATAGCTGGTATTGTTTTTGTTCGTAGGGAGCACCGTTCTTCTAGATCTGCTCTCTTTGATGACCTTGAGGAGGGCGGCCTGAGGACTAGCTCTTCAGTTGAAATTAAAGAGCATGACAATGACAAAGCCCTCCATACTTTGGAAGATAGAGTTTCTATTCTGAAAAGGGTAAATTTTACGCAGAGAGACGCTTCTTAATTATTAATTTATTCATCTCCTATCTTTTATATAAAAGGTTGTTATGATTGAACACATTATATCCTATCCTTTTGAAGCAATTAGGATAGGTTGAATGTCATAAGTTGAAGTGACTCTTGACATAATGATACTGTCTTAGCCATTTTACTAAGTAAACTGTTTTTAAAACAATTATTTTGACATTGAAATCCTGCTGCATGAGCATCTTAAATTATTATTCAGATGATTTTGCAATCCAGTAATTCATCCTCTTGCTTCAGATAATTTAATCATAGAAAATGAATGGGAAAAAGGATGCAATGCTTTTTTCTTTCAGAATTTCTTCTATATTTGTGCATTTAGCAGCTGAATTTGAGTGTGATGATGAGCTTTCCTTCAAGTATGATCATAGGTGTTGCCTGAAAGTGTCGTACCATTTGATGCAAATGACTTGTATGCTCAAAGAGCTCTGGAATAGGCGAACTAATTGAGTGGTTTCATTAGTTTAGACTAGTGGTATAAAGAACTCTCGGATATAATAAGTGGTTATAGGTCTAAAGACTCCAAATTCCCTTTTAATGACTAATGACTGATGGTTAATTTTCTGTTTTGTCACTACCTAAAATGGTGAATTGGTGTAAAAGGATTGCTGTTGCAGTGCAACATGAGATAGTACTTAAAGTAACTCTTTGTTTCATATAGATACAGTGCAAATGATCACTTGATATCTCCGTCCTCGCTTAATATAAACACCAAAGATGAGGGTTTTCTTACTACTTCCATAATGGTGCTTATAGTTTCCATTTCCAGCTAGAAAGAATTCTGTTCCCCCTCCTCGATTTGTCTTCTTAATTGAGCAACTTTTGATGTATATATTGTTTAAAATAGTTGACAGGTGACATTCACGAAGAAGTGGAGAGTCATAATCATTTGCTTGACCGGATGGTATGTTGTTTCTTCAAGGTTATTTATGTCTGTCTTGTGAGTTGAAATGATTGGATCGTGTTTCTTTATGTGGATTTTATTCTAATCAGGGAAATGGCATGGATGCTTCAAGGGGTATAATGTCAAGAACCATGGATCGATTCAAGATGGTAATTGATCTAGCTCTTTTCAGTTTATTTTATTTAGGGGAAAATGTGGTTTTATCTTATATATATACATGCCTTTAATAGGAAGGAAGAAGATGATGAGATAGAGATTTTTTTCTTTTGTAATTCTTGATGTTTGATTAGAGATTTTTTTTTTCGGATTTGGGTTTCTTCTTTGTAATTTCATTCCATCAATAACCCTTTCTTGTTTGATAACCATTTGACTTTTGATTTTTAGTTTCTAAAAAAATGAGACCGTACACTTCTTCCTTCTCTAAATTGTTGGCTTTGTTATCTACTATTTTCCAACGTTTTAAAAACCAAAGTAGTTTTTAAAAACTTGTTTTTGTTTTTTTGGAATTGGCTAAGAATTCAACTTTACTTAAGAAAAATGCAAATCATCGTAAGAAATTTAGAGGAAATAGACTTAATTAAAAAAAAAACGAAATAGTTAATGATGGATGTCTAAAAGATGAGAAATCAAGCCCAGAAAAATTGGCAGTACATTCTCTATTTGCATGCATTCTCCTAATACAAACATTCATGTTCTACAGGTTTTCGAGCAAAAAACGAAGTGGAGAACTTGTAGACTTGCATTGTATTTTGTATTGTCCTTTTTACTTCTTTTCTATCTCATCAGGTAAGAATTTAGCTCAGCTGAGGGTATCATTTTTTCAAACATTGCTCTCTTTTGCAATCCATGCTGTTTGGTCAAACTACCAAATTTTTGCCTTCATTAAATTAGACCCTTTCATTGAGTTCTTTTAAATTTATCGAAATTTTCATCTACGTTGTTATATTAACAGCTTGCCGTGATGTTTTAGCAAGTATTTATTCCACTAATTCTTTGTTGGAATGTTCAGTTTTCTTTTATATAGAAGGGAATGCAGTTTTAATATCCTTCTCTTTTCTTGCATTTGAGCCTTTAAATTCAAACCTATCCATTTTTGTATTTCATTTTCATTGGCATATTCCATTTGCAGGTTCCTCAGATACTTCATGCAAAGTTGAAGTAAGATTTCTATGTTGAATCAACTCGAAGTATTGCACAACTGTGACGACCTTGCATAGTCCTTGTTTCCACAAGAACACTGAAATACAGACCGTACTTTCCTGCAATACAAGATTTGTCAAAATGCATAGTTTCTGCTTCGAAGGAGTGGAACAGATGGTCATTTTTTTTAATCACTATTCTTAATTAATTTTTTTATGGGTTAAAAGGCCATATCCGTCAGTTTAGGTATATATATATCTTGATTTAAATCATGAGTATATTATGCTCATGCTTAATAAGGTTTTATTTTCAGGCTAGTACAGGACACACTATCTCATTGACTCCCATTTTGAATCAGTATATTTGGGCAGGTTTGAAACTGGATTTTGTTCTATTGACCTAAACTAAATTAGAATCATTTAGTTGCAATTATCGGACTAGTTTTCTTGATCTTGGAAGTATACGAATTTGGCGATTCCATGTCCATTTGCGTAGTTTGTAAACAAATGTTAAATTCCA

mRNA sequence

ATGAGTTACAGAAGGGAGCACCGTTCTTCTAGATCTGCTCTCTTTGATGACCTTGAGGAGGGCGGCCTGAGGACTAGCTCTTCAGTTGAAATTAAAGAGCATGACAATGACAAAGCCCTCCATACTTTGGAAGATAGAGTTTCTATTCTGAAAAGGTTGACAGGTGACATTCACGAAGAAGTGGAGAGTCATAATCATTTGCTTGACCGGATGGGAAATGGCATGGATGCTTCAAGGGGTATAATGTCAAGAACCATGGATCGATTCAAGATGGTTTTCGAGCAAAAAACGAAGTGGAGAACTTGTAGACTTGCATTGTATTTTGTATTGTCCTTTTTACTTCTTTTCTATCTCATCAGGTTCCTCAGATACTTCATGCAAAGTTGA

Coding sequence (CDS)

ATGAGTTACAGAAGGGAGCACCGTTCTTCTAGATCTGCTCTCTTTGATGACCTTGAGGAGGGCGGCCTGAGGACTAGCTCTTCAGTTGAAATTAAAGAGCATGACAATGACAAAGCCCTCCATACTTTGGAAGATAGAGTTTCTATTCTGAAAAGGTTGACAGGTGACATTCACGAAGAAGTGGAGAGTCATAATCATTTGCTTGACCGGATGGGAAATGGCATGGATGCTTCAAGGGGTATAATGTCAAGAACCATGGATCGATTCAAGATGGTTTTCGAGCAAAAAACGAAGTGGAGAACTTGTAGACTTGCATTGTATTTTGTATTGTCCTTTTTACTTCTTTTCTATCTCATCAGGTTCCTCAGATACTTCATGCAAAGTTGA

Protein sequence

MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLFYLIRFLRYFMQS*

Homology

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BLAST of Csa3G469700 vs. Swiss-Prot
Match: BET12_ARATH (Bet1-like SNARE 1-2 OS=Arabidopsis thaliana GN=BET12 PE=2 SV=4)

HSP 1 Score: 158.7 bits (400), Expect = 4.3e-38
Identity = 78/127 (61.42%), Postives = 101/127 (79.53%), Query Frame = 1


Query: 1   MSYRREHRSSRSALFDDL---EEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDI 60
           M++RRE+R+SR++LFD L   EEG LR SSS    E DND+AL  L+DRVS LKR+TGDI
Sbjct: 1   MNFRRENRASRTSLFDGLDGLEEGRLRASSSYAHDERDNDEALENLQDRVSFLKRVTGDI 60

Query: 61  HEEVESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLFY 120
           HEEVE+HN LLD++GN MD++RGIMS T++RFK+VFE+K+  ++C+L  YFVL FL+++Y
Sbjct: 61  HEEVENHNRLLDKVGNKMDSARGIMSGTINRFKLVFEKKSNRKSCKLIAYFVLLFLIMYY 120

Query: 121 LIRFLRY 125
           LIR L Y
Sbjct: 121 LIRLLNY 127

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BLAST of Csa3G469700 vs. Swiss-Prot
Match: BET11_ARATH (Bet1-like SNARE 1-1 OS=Arabidopsis thaliana GN=BET11 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 2.7e-32
Identity = 71/122 (58.20%), Postives = 90/122 (73.77%), Query Frame = 1


Query: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSV--EIKEHDNDKALHTLEDRVSILKRLTGDIH 60
           M+ RRE R  RS+LFD +EEGG+R +SS   EI EH+N++AL  L+DRV +LKRL+GDI+
Sbjct: 1   MNPRREPRGGRSSLFDGIEEGGIRAASSYSHEINEHENERALEGLQDRVILLKRLSGDIN 60

Query: 61  EEVESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLFYL 120
           EEV++HN +LDRMGN MD+SRG +S TMDRFK VFE K+  R   L   FV  FL+++YL
Sbjct: 61  EEVDTHNRMLDRMGNDMDSSRGFLSGTMDRFKTVFETKSSRRMLTLVASFVGLFLVIYYL 120

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BLAST of Csa3G469700 vs. Swiss-Prot
Match: BET1_RAT (BET1 homolog OS=Rattus norvegicus GN=Bet1 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.1e-06
Identity = 30/114 (26.32%), Postives = 56/114 (49.12%), Query Frame = 1


Query: 11  RSALFDDLEEGGLRT----SSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNH 70
           R+ L D    GG       +S     E +ND+   +L  +V+ +K L+ +I  EV++ N 
Sbjct: 3   RAGLGDGAPPGGYGNYGYANSGYNACEEENDRLTESLRSKVTAIKSLSIEIGHEVKNQNK 62

Query: 71  LLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLFYLIR 121
           LL  M +  D++ G + +TM R K++         C + L+ +  F +++++I+
Sbjct: 63  LLAEMDSQFDSTTGFLGKTMGRLKILSRGSQTKLLCYMMLFSLFVFFVIYWIIK 116

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BLAST of Csa3G469700 vs. Swiss-Prot
Match: BET1_MOUSE (BET1 homolog OS=Mus musculus GN=Bet1 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 2.6e-06
Identity = 24/88 (27.27%), Postives = 48/88 (54.55%), Query Frame = 1


Query: 33  EHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRMGNGMDASRGIMSRTMDRFKMV 92
           E +ND+   +L  +V+ +K L+ +I  EV++ N LL  M +  D++ G + +TM R K++
Sbjct: 29  EEENDRLTESLRSKVTAIKSLSIEIGHEVKNQNKLLAEMDSQFDSTTGFLGKTMGRLKIL 88

Query: 93  FEQKTKWRTCRLALYFVLSFLLLFYLIR 121
                    C + L+ +  F +++++I+
Sbjct: 89  SRGSQTKLLCYMMLFSLFVFFVIYWIIK 116

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BLAST of Csa3G469700 vs. TrEMBL
Match: A0A0A0L808_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G469700 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 5.8e-66
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 1


Query: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEE 60
           MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEE
Sbjct: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEE 60

Query: 61  VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLFYLIR 120
           VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLFYLIR
Sbjct: 61  VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLFYLIR 120

Query: 121 FLRYFMQS 129
           FLRYFMQS
Sbjct: 121 FLRYFMQS 128

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BLAST of Csa3G469700 vs. TrEMBL
Match: A0A061ENL7_THECC (Target SNARE coiled-coil domain protein OS=Theobroma cacao GN=TCM_020824 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 4.5e-42
Identity = 93/129 (72.09%), Postives = 108/129 (83.72%), Query Frame = 1


Query: 1   MSYRREHRSSRSALFDD---LEEGGLRTSSSV--EIKEHDNDKALHTLEDRVSILKRLTG 60
           MSYRR+HRSS+SALFD    LEEGGLR+SSS   EIKEH NDKA+ +L+DRV+ LKRLTG
Sbjct: 1   MSYRRDHRSSKSALFDGFDKLEEGGLRSSSSFSHEIKEHHNDKAVDSLQDRVAFLKRLTG 60

Query: 61  DIHEEVESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLL 120
           DIH+EVESHN LLDRMGNGMDA+RGIMS TMDRFK VFE+K+  R C L   FV+SFL++
Sbjct: 61  DIHDEVESHNRLLDRMGNGMDATRGIMSGTMDRFKKVFEKKSNRRMCTLVGGFVVSFLII 120

Query: 121 FYLIRFLRY 125
           +YLIR LRY
Sbjct: 121 YYLIRMLRY 129

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BLAST of Csa3G469700 vs. TrEMBL
Match: A0A103XFF8_CYNCS (Target SNARE coiled-coil domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_008298 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 7.7e-42
Identity = 87/131 (66.41%), Postives = 111/131 (84.73%), Query Frame = 1


Query: 1   MSYRREHRSSRSALFDDL---EEGGLRTSSSV--EIKEHDNDKALHTLEDRVSILKRLTG 60
           MSYRR++R+SR+ALFD+L   EEGGLR SSS    I EH+N+K+L++L+DRV  LKRLTG
Sbjct: 1   MSYRRDNRASRTALFDNLDGIEEGGLRASSSYSGNIDEHENEKSLNSLQDRVVFLKRLTG 60

Query: 61  DIHEEVESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLL 120
           DIHEEV+SHN +LDRMGNGMD++RGIMS TMDRFKMVFE+K+  +TC+L  YFVLSF ++
Sbjct: 61  DIHEEVQSHNRMLDRMGNGMDSARGIMSGTMDRFKMVFEKKSSRKTCKLVTYFVLSFFII 120

Query: 121 FYLIRFLRYFM 127
           +YL RFL Y++
Sbjct: 121 YYLFRFLMYYL 131

[Close]

BLAST of Csa3G469700 vs. TrEMBL
Match: M1BG83_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400017253 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 6.5e-41
Identity = 86/131 (65.65%), Postives = 108/131 (82.44%), Query Frame = 1


Query: 1   MSYRREHRSSRSALFDD---LEEGGLRTSSSV--EIKEHDNDKALHTLEDRVSILKRLTG 60
           MSYRR+HR+ R+ALFD+   +EEGG+R SSS   ++ E DNDKA+ +L+DRVS LK+LTG
Sbjct: 1   MSYRRDHRAHRAALFDNYDSIEEGGIRASSSYPRDLDERDNDKAVDSLQDRVSFLKKLTG 60

Query: 61  DIHEEVESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLL 120
           DIHEEVE+HN +LDRMGN MD+SRGIMS TMDRFKMVFE+K+  + C+L  YFVLSF L+
Sbjct: 61  DIHEEVETHNKMLDRMGNEMDSSRGIMSGTMDRFKMVFEKKSNQKVCKLVGYFVLSFFLI 120

Query: 121 FYLIRFLRYFM 127
           +Y+ RFL YFM
Sbjct: 121 YYIFRFLMYFM 131

[Close]

BLAST of Csa3G469700 vs. TrEMBL
Match: A0A022QXC1_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a016115mg PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 8.5e-41
Identity = 89/131 (67.94%), Postives = 106/131 (80.92%), Query Frame = 1


Query: 1   MSYRREHRSSRSALFDDL---EEGGLRTSSSVE--IKEHDNDKALHTLEDRVSILKRLTG 60
           MSYRR++RSSR+ALFD+L   EEGGLR+SSS    I EH+N+K + +L DRVS LKRLTG
Sbjct: 1   MSYRRDNRSSRAALFDNLDSLEEGGLRSSSSYSSGIDEHENEKTMDSLHDRVSFLKRLTG 60

Query: 61  DIHEEVESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLL 120
           DIHEEVESHN +LDR GN MDASRGIMS TMDRFKMVFE+K+  R C+LA YFV++F L 
Sbjct: 61  DIHEEVESHNRMLDRTGNEMDASRGIMSGTMDRFKMVFEKKSNRRICKLATYFVIAFFLF 120

Query: 121 FYLIRFLRYFM 127
           +Y +R L YFM
Sbjct: 121 YYTVRILLYFM 131

[Close]

BLAST of Csa3G469700 vs. TAIR10
Match: AT4G14455.1 (AT4G14455.1 Target SNARE coiled-coil domain protein)

HSP 1 Score: 158.7 bits (400), Expect = 2.4e-39
Identity = 78/127 (61.42%), Postives = 101/127 (79.53%), Query Frame = 1


Query: 1   MSYRREHRSSRSALFDDL---EEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDI 60
           M++RRE+R+SR++LFD L   EEG LR SSS    E DND+AL  L+DRVS LKR+TGDI
Sbjct: 1   MNFRRENRASRTSLFDGLDGLEEGRLRASSSYAHDERDNDEALENLQDRVSFLKRVTGDI 60

Query: 61  HEEVESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLFY 120
           HEEVE+HN LLD++GN MD++RGIMS T++RFK+VFE+K+  ++C+L  YFVL FL+++Y
Sbjct: 61  HEEVENHNRLLDKVGNKMDSARGIMSGTINRFKLVFEKKSNRKSCKLIAYFVLLFLIMYY 120

Query: 121 LIRFLRY 125
           LIR L Y
Sbjct: 121 LIRLLNY 127

[Close]

BLAST of Csa3G469700 vs. TAIR10
Match: AT3G58170.1 (AT3G58170.1 BET1P/SFT1P-like protein 14A)

HSP 1 Score: 139.4 bits (350), Expect = 1.5e-33
Identity = 71/122 (58.20%), Postives = 90/122 (73.77%), Query Frame = 1


Query: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSV--EIKEHDNDKALHTLEDRVSILKRLTGDIH 60
           M+ RRE R  RS+LFD +EEGG+R +SS   EI EH+N++AL  L+DRV +LKRL+GDI+
Sbjct: 1   MNPRREPRGGRSSLFDGIEEGGIRAASSYSHEINEHENERALEGLQDRVILLKRLSGDIN 60

Query: 61  EEVESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLFYL 120
           EEV++HN +LDRMGN MD+SRG +S TMDRFK VFE K+  R   L   FV  FL+++YL
Sbjct: 61  EEVDTHNRMLDRMGNDMDSSRGFLSGTMDRFKTVFETKSSRRMLTLVASFVGLFLVIYYL 120

[Close]

BLAST of Csa3G469700 vs. NCBI nr
Match: gi|449467371|ref|XP_004151397.1| (PREDICTED: bet1-like SNARE 1-2 isoform X1 [Cucumis sativus])

HSP 1 Score: 258.1 bits (658), Expect = 8.4e-66
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 1


Query: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEE 60
           MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEE
Sbjct: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEE 60

Query: 61  VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLFYLIR 120
           VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLFYLIR
Sbjct: 61  VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLFYLIR 120

Query: 121 FLRYFMQS 129
           FLRYFMQS
Sbjct: 121 FLRYFMQS 128

[Close]

BLAST of Csa3G469700 vs. NCBI nr
Match: gi|659093418|ref|XP_008447527.1| (PREDICTED: bet1-like SNARE 1-2 isoform X1 [Cucumis melo])

HSP 1 Score: 256.1 bits (653), Expect = 3.2e-65
Identity = 126/128 (98.44%), Postives = 127/128 (99.22%), Query Frame = 1


Query: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEE 60
           MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEE
Sbjct: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEE 60

Query: 61  VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLFYLIR 120
           VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYF+LSFLL FYLIR
Sbjct: 61  VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFILSFLLFFYLIR 120

Query: 121 FLRYFMQS 129
           FLRYFMQS
Sbjct: 121 FLRYFMQS 128

[Close]

BLAST of Csa3G469700 vs. NCBI nr
Match: gi|743858697|ref|XP_011030529.1| (PREDICTED: bet1-like SNARE 1-2 [Populus euphratica])

HSP 1 Score: 186.8 bits (473), Expect = 2.4e-44
Identity = 97/130 (74.62%), Postives = 109/130 (83.85%), Query Frame = 1


Query: 1   MSYRREHRSSRSALFDD-LEEGGLRTSSSV--EIKEHDNDKALHTLEDRVSILKRLTGDI 60
           MSYRREHR+SR+ALFDD LEEGGLR+SSS   E  +HDNDKA+HTL+DRV  LKRLTGDI
Sbjct: 1   MSYRREHRNSRTALFDDGLEEGGLRSSSSFSHETDDHDNDKAVHTLQDRVLFLKRLTGDI 60

Query: 61  HEEVESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLFY 120
           HEEVES N LLDRMGN MD SRGIMS TMDRFKMVFE+K+  RTC LA +F+LSFL+L+Y
Sbjct: 61  HEEVESQNRLLDRMGNNMDTSRGIMSGTMDRFKMVFEKKSSRRTCALAGFFILSFLILYY 120

Query: 121 LIRFLRYFMQ 128
           LIR L Y  Q
Sbjct: 121 LIRVLVYLKQ 130

[Close]

BLAST of Csa3G469700 vs. NCBI nr
Match: gi|659093420|ref|XP_008447528.1| (PREDICTED: bet1-like SNARE 1-2 isoform X2 [Cucumis melo])

HSP 1 Score: 185.3 bits (469), Expect = 6.9e-44
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1


Query: 1  MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEE 60
          MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEE
Sbjct: 1  MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEE 60

Query: 61 VESHNHLLDRMGNGMDASRGIMSRTMDRFKMV 93
          VESHNHLLDRMGNGMDASRGIMSRTMDRFKMV
Sbjct: 61 VESHNHLLDRMGNGMDASRGIMSRTMDRFKMV 92

[Close]

BLAST of Csa3G469700 vs. NCBI nr
Match: gi|645235698|ref|XP_008224391.1| (PREDICTED: bet1-like SNARE 1-1 [Prunus mume])

HSP 1 Score: 184.9 bits (468), Expect = 9.0e-44
Identity = 94/130 (72.31%), Postives = 106/130 (81.54%), Query Frame = 1


Query: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSV--EIKEHDNDKALHTLEDRVSILKRLTGDIH 60
           MSYRREHRSS+SAL D LEEGGLR SSS   +I EHDNDKA+ +L+DRV  LKRLTGDIH
Sbjct: 4   MSYRREHRSSKSALLDGLEEGGLRASSSYSRDINEHDNDKAVQSLQDRVVFLKRLTGDIH 63

Query: 61  EEVESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLFYL 120
           EEVESHN LLDRMGN MDASRGI+S TMDRFKMVFE+K+  R CRL  YFV+SFL+++ L
Sbjct: 64  EEVESHNRLLDRMGNHMDASRGILSGTMDRFKMVFEKKSSRRMCRLVAYFVVSFLIIYVL 123

Query: 121 IRFLRYFMQS 129
            R  R FM S
Sbjct: 124 FRIRRIFMHS 133

The following BLAST results are available for this feature:

BLAST of Csa3G469700 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BET12_ARATH	4.3e-38	61.42	Bet1-like SNARE 1-2 OS=Arabidopsis thaliana GN=BET12 PE=2 SV=4	[more]
BET11_ARATH	2.7e-32	58.20	Bet1-like SNARE 1-1 OS=Arabidopsis thaliana GN=BET11 PE=1 SV=1	[more]
BET1_RAT	1.1e-06	26.32	BET1 homolog OS=Rattus norvegicus GN=Bet1 PE=1 SV=1	[more]
BET1_MOUSE	2.6e-06	27.27	BET1 homolog OS=Mus musculus GN=Bet1 PE=1 SV=1	[more]

BLAST of Csa3G469700 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L808_CUCSA	5.8e-66	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G469700 PE=4 SV=1	[more]
A0A061ENL7_THECC	4.5e-42	72.09	Target SNARE coiled-coil domain protein OS=Theobroma cacao GN=TCM_020824 PE=4 SV...	[more]
A0A103XFF8_CYNCS	7.7e-42	66.41	Target SNARE coiled-coil domain-containing protein OS=Cynara cardunculus var. sc...	[more]
M1BG83_SOLTU	6.5e-41	65.65	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400017253 PE=4 SV=1	[more]
A0A022QXC1_ERYGU	8.5e-41	67.94	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a016115mg PE=4 SV=1	[more]

BLAST of Csa3G469700 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G14455.1	2.4e-39	61.42	Target SNARE coiled-coil domain protein	[more]
AT3G58170.1	1.5e-33	58.20	BET1P/SFT1P-like protein 14A	[more]

BLAST of Csa3G469700 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449467371\|ref\|XP_004151397.1\|	8.4e-66	100.00	PREDICTED: bet1-like SNARE 1-2 isoform X1 [Cucumis sativus]	[more]
gi\|659093418\|ref\|XP_008447527.1\|	3.2e-65	98.44	PREDICTED: bet1-like SNARE 1-2 isoform X1 [Cucumis melo]	[more]
gi\|743858697\|ref\|XP_011030529.1\|	2.4e-44	74.62	PREDICTED: bet1-like SNARE 1-2 [Populus euphratica]	[more]
gi\|659093420\|ref\|XP_008447528.1\|	6.9e-44	100.00	PREDICTED: bet1-like SNARE 1-2 isoform X2 [Cucumis melo]	[more]
gi\|645235698\|ref\|XP_008224391.1\|	9.0e-44	72.31	PREDICTED: bet1-like SNARE 1-1 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000727	T_SNARE_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	ER to Golgi vesicle-mediated transport
biological_process	GO:0061025	membrane fusion
biological_process	GO:0008150	biological_process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005484	SNAP receptor activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU086407	cucumber EST collection version 3.0	transcribed_cluster
CU101267	cucumber EST collection version 3.0	transcribed_cluster
CU103295	cucumber EST collection version 3.0	transcribed_cluster
CU121526	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa3G469700.1	Csa3G469700.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU103295	CU103295	transcribed_cluster
CU086407	CU086407	transcribed_cluster
CU101267	CU101267	transcribed_cluster
CU121526	CU121526	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000727	Target SNARE coiled-coil homology domain	PROFILE	PS50192	T_SNARE	coord: 30..92 score: 11
None	No IPR available	GENE3D	G3DSA:1.20.5.110		coord: 30..94 score: 7.5
None	No IPR available	PANTHER	PTHR12791	GOLGI SNARE BET1-RELATED	coord: 1..126 score: 8.8
None	No IPR available	PANTHER	PTHR12791:SF36	BET1-LIKE SNARE 1-2	coord: 1..126 score: 8.8
None	No IPR available	unknown	SSF58038	SNARE fusion complex	coord: 29..92 score: 1.05

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa3G469700	MELO3C012982	Melon (DHL92) v3.5.1	cumeB226
Csa3G469700	Lsi07G005140	Bottle gourd (USVL1VR-Ls)	culsiB236
Csa3G469700	MELO3C012982.2	Melon (DHL92) v3.6.1	cumedB211
Csa3G469700	CsGy3G023210	Cucumber (Gy14) v2	cgybcuB119

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa3G469700	Cucurbita moschata (Rifu)	cmocuB234
Csa3G469700	Cucurbita moschata (Rifu)	cmocuB350
Csa3G469700	Cucurbita moschata (Rifu)	cmocuB436
Csa3G469700	Cucurbita moschata (Rifu)	cmocuB447
Csa3G469700	Melon (DHL92) v3.5.1	cumeB212
Csa3G469700	Watermelon (Charleston Gray)	cuwcgB252
Csa3G469700	Watermelon (Charleston Gray)	cuwcgB256
Csa3G469700	Watermelon (97103) v1	cuwmB219
Csa3G469700	Watermelon (97103) v1	cuwmB229
Csa3G469700	Cucurbita pepo (Zucchini)	cpecuB561
Csa3G469700	Cucurbita pepo (Zucchini)	cpecuB604
Csa3G469700	Bottle gourd (USVL1VR-Ls)	culsiB163
Csa3G469700	Bottle gourd (USVL1VR-Ls)	culsiB230
Csa3G469700	Cucumber (Gy14) v2	cgybcuB109
Csa3G469700	Silver-seed gourd	carcuB0126
Csa3G469700	Silver-seed gourd	carcuB0127
Csa3G469700	Silver-seed gourd	carcuB0224
Csa3G469700	Silver-seed gourd	carcuB1038
Csa3G469700	Watermelon (97103) v2	cuwmbB236
Csa3G469700	Watermelon (97103) v2	cuwmbB242
Csa3G469700	Wax gourd	cuwgoB274
Csa3G469700	Cucurbita maxima (Rimu)	cmacuB246
Csa3G469700	Cucurbita maxima (Rimu)	cmacuB360
Csa3G469700	Cucurbita maxima (Rimu)	cmacuB449
Csa3G469700	Cucurbita maxima (Rimu)	cmacuB461