Lsi07G005140 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi07G005140
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionBet1-like SNARE 1-2
Locationchr07 : 5385034 .. 5396276 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAACTGTTTTTTCACATGGGAGGAGTATTGTGCTCTCGAGATCTTCTCTATGCACTTATTGGGATCTAATCCTAGGGTTTTGTTATGTAGGTTTGAACAGTTTGATTGAGGTTTAGAGACAATTTAAGGAGTGGGCGACCATGAGAAAAATTTATTAGGTTCAAGGTCGAAAGGCGAATTTAAATCATAAATTTTGTGGATAAATTCTTTAAATTTTGAGTAAACTTACAACACGTGTTTAGGCCTTAAATATTGAAGCTAAATTGTGGATTTATGAATTTCAGCCATAATTTTCCTTATTCTAACTTGGGTTTCGTGGTGTCTTTGTGAAGTGGTCGTCTTCTTCAACATATATTTTGGAATTTATCAATACTTTAGAGCTTTGGATTTTTCGCATTTTCTATTTGAAAGTTGAATTTCGACAATTCATTCATGAACTCAGGTAATTTTTGTCTCCCTTTTAAATCCAATCGGTCTCCATGTGTGTATTATAGTGTGGAGTATGAAATTTAGAGGCCTTTAGGTCTCTCACATTGGCATTCACATTACATCTGTGTGTATTATAATGTGGAGTATGAATAATTATCGTGTAGTTTATGCTTGTGGAAGTTCATTCTCTAGCTTTTGCATAGTATTGTGTTATGGTGGTAGTTACTGGTCAATGATTTATAAGAGATTGAATTCTTTGTTAGATATGTTGAATTTCTGATCGTGATATGGAAATTCTTTTATCGTTGACACTCCTTTAGTTTGATTTTACAGAGTGGAAATGACACTTAAGGAACTTTAAAAAAAATTTCAATTGGTTTTGAGAGTTCAAAAAACAATTAGGCCCTTTTTAAGTGGTTTTGGAATCAAAGTGCACTTATGCACTTTTTAGATTGTTTTAAGAGTCAAAATGTCACTTATGCATTGTTTTGGTTGTTTTGAGAGTCAAAGTGACACTTATGCATTATTTAGCTTATTTTGAGAGTCAAAGTGACACTTATATGCACTGTTTAGGTTGTTTTGAGAGTCAAAGTGGCACTTATATGCATTGTTTAGGTTACTTCTTGTATGTAAAAGGTCCAAGCCCATTATTGTTGGCTGGGTTGGCCTTACTCGTTTTTCTTCTCCTCTTTATGTAATCTGTTATGGAATTCTTCTAGAATTATTCCTTCGATTAGTGAAGAAAATCAGACGTGGGTGTGTATTTTTGCAAGAGTTTTTCTCCCAAGCCATCTATATATGGCTGGTATTCTACACCATTTTAATATAGAAGCCAAAGGTTTCTCTTGCACCTCTCTGCCTTTTATTTCTGTTACATTTTTTTCAATTAAGCAGACATTCTGGCTGAAGAAGAACGTATTTCGCTGAACTAAGCCCGTGATGAGTTACAGAAGGTTTGTATACAAAATCTTCGTCGATGCACAGTTCAGTTAATGTTATTTAGCTATTCCACCAGACTGTTCCGTTGCAATGCGAACTATATGATTTGGATCTGAGGACCTCTTTTTTGTTTAAACTGAATATGCTTCCATTAGTGTCTAAAATTCTGATTTCTGCCTTCTTTTGTTGTTATTTTCGTTAATTAGCTCGCTAGAGTTGCTGTGATCTCATATTTCACGGCTTTTGCATGAATTGGTTCTGATCTTGTGTTATAATTCAATTATGATTTACATTTGAGTTCTTAATGAAGCAATTTGGGACAAAATAGTATGAAGTAAAGAGTAGATCGTTGCATCAATTTGTACGATAGGATATGGCTTTCGATCTGGTTGCATATCCCAGACACGAAAGTGCGTGAATCCCATGATGACTTAAAAAGCTACAACTTGATATTAATTTTCCATTTCTTGCTTCAATTTTAAGTTTTTGTCCATATTTTGGATAGTAATTTGAATGAAAGCATAATGAAGGTTAAATGTCTTCTCAATTCTAGAATTCTGGATGTTAGGGTCTTGTAATCCCATTATTTCTTCCTCCTTGGTTACATGGACTTAGCCATTTTTTATTCTATTGATTAAAATTTGTTAGACACAAACAATGGTATTGTTCTTGGATATCACAATCTCGGTTCTTGTACAATAATTGGTATATTGTTTCGTTTGAAATAACTGGTATTGTTTTTGTTCAAAGGGAGCACCGTTCTTCTAGATCTGCTCTCTTTGATGACATCGAGGAGGGTGGTCTCAGGACTAGCTCTTCCGTTGAAATTAAAGAGCATGACAATGACAAAGCCCTCCATACTTTGGAAGATAGAGTTTCTATTCTGAAGAGGGTAAGTTCTAAGCTGAGGGACGCTTCTTAATTATTAATTTATCTATCTCTGATCTTTTATATAAAAGGTTGTTCTGATTGAACACATTATATCCTATCCTTTTGAAGCAATTAGGATAGGTTCAATGTTAGGATAGGTTCAATGTCATAAGTTGAAGTGACTCTTTCTATGCTATAATATCTTAGAGCCCGTTTGGATTGACTTTCTAAGTATTTAAATAAGTTTTTATAAGTTCAACAAAGTGTTTATAAACACTTAAAAAATCAATCCAAACGGGCCCTTAGCCATTTAACTTAGTAAACTGTTTTTAAACAATCATTTTGGAATTGGGATCCTGTTGCTTCTCTCTTTGCTGTATGAGCATCTTAATTTATTATTCAGATGACTTTGCAATCCAGTGATTCATCCTCTTGCTTCAGATTCTTTAATCGTAGAAGAACAGGAATATTGAATAGGAAAAAGGATATGAAGCTTTTTCTTTCAAAATTTCTTCTATATTTGTGCATCTTAGTACTTGAATTTGAGTATGATAATTCGTTCATCTTAGCATCAAGTGCCATACCATTGATGCAAAAGACTTCTGTCCTTGAAGAGCTCTGGAATGGGCGAACTAGTAAATATTGAGTGGTGTCATTAGTTTAGACTAGTGGTATAAAGAACTCTCGGATATAATAAGTGGTTATAGGTCTCTGACTCCAAATTCCTTGTAATGACAAATGATTAATTTTCTGTTTGTCACTGCCTAAAATGGTAAATTTCAAGGCGTAAAAGGATTGCTGATGATTGGTGCAGTGCAGCATGAGATAGTACTTAAAGTAACACTTCGTTTCATATAGATACAGTTTAAATGATCACTAGATATCTCCGTCATCACTTAGTATACACACCATGGACTAGGTTTTTCTTAGTACTTCCATAACGGTGCTTACAGTTTCCATTTCCAGCAAGAAAGAATTCTGATCCCCTTCCTCGATTTGTCTTCTTGATCCAGCAACTCTTGATGTCAATATTGTTTGAAATAGTTGACAGGTGACATTCACGAAGAAGTGGAGAGTCATAATCATTTACTTGACCGAATGGTATGTTGGTTCTTCACGGTTATTTATTTATGTCTGACTGTCTTGCGAGTGGAAAATGATTGGAGCATGTTTCTTTATGTGGATTTTATTCTAATAAGGGAAATGGCATGGATGCTTCAAGGGGTATAATGTCAAGAACCATGGATCGATTCAAGATGGTAATTGATCTAGCTCTTTTCAGCTCATTTTATTTAGGGGGAAATATGGCTATATTATATACATACGTTTAATAGGAAGGAAGAAAATGATGAGATAGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAATTCTTTGATGTTCAATTAGAGGGGTTTTTTTTTGTGTAATTCCCTTGGATTTGGGTTTTGTTCTTTGTAATTTCATTCCATCAAGGAAATTGTGTTATATAAAATAATAATAATGAAAAAAGAAAGAAAGAGATAGACACTGTGGGACTGAACTTACAAAATTTCTTTTGCTCGCAAAATTTTTCCTCCGACTTATGGGCAAACAACCATCCTTTGTTCCAAAAAACTAAGGTCCTGTTTGATAACCATTTGACTTTTGGTTTTTAGTTTTTGAAAATTAAGCCTATAAACACTTTTTCGTCCTCTAAATTTCTGGCTTTGTTATCTATTTTTTATTGGTTTTAAAAAACCAAGTCAAATTTTGAATACTAAAGAACGTAGGTTTTTAAAACTTGTTTTTGTTTTTTGGAATTTGACTAAGACTTCAACTTCTCTACTTTAAAAAAATGCACATCATTGTAAAAAATTGAGATGAAATAGACTTCATTTTCAAAAACCAAAAAACGAAATGGTTAACAAAGGGGGCCTAAAAGATAAGCAATATCAAGCCCTAAAAATTTGGCAGTACATTCCTTCATCTTGCAAACGATCTATTTGCATGCATTCTCCTAATTCAAATGTTCATGTTGTACAGGTTTTCGAGCAGAAATCTAAGTGGAGAACTTGTAGACTTGCATTGTATTTTGTATTGTCCTTCTTACTTCTTTTCTATCTCATCAGGTAAGAATTCAGCTCAGCAGATCACTTTGTTCCTCAACTTTTTCCAACATTGCTCTGTTTTTTTGCGTTTAACATGGTCAGTAAGTATCCGTGCTATCCATGCTGTTTGCTCGAGTCTGAATTACTGAACCTATGCATGCAGTCATTAAATTAGACCATTTTATTGAGTTCTTTTAAATTTATCGAATTTTTCATTTACATTGTTATGTTAACAGCTTGCCGTGATGTTTTAGCGAGTATTTATTCCAGTAATTCTTTGTTGGAATGTTCAGTTTTCTTTTATATAGAAGGGGATGCAGTTTTGATATCCTTCTCTTTCTTGCATCTCAGCTTTTAGATTCAAATCTCCCCATTTTTGTATTTCATTTTTGGTTACCTTTTTCATTGGCATTCCATTTCCAGGTTCCTCAGATACTTCATGCAAAGTTAAAGTAAGGTGTCTATGTCGAATCAACTTGAAGCATGATTGTTATGACCTTTGTATAGTCCTGAAATATAGACCATAATTTTACTTTTAGTCTTATTTTGATACTCAGAATTTTTAAGTTTATTCTATTTTTGTTATATTTGATTATAAAAGAATTGCGACGCATTCATATATCTATGTTTGTGTCTTAGAAACGAGTTTATTAATTTAAAAAATTGTAATATATTTTCGTAATTATGACAACGTGAATATAAAAAATTTAATTACAAGTTCAATTGAATAAAGTATTGAGAGAGAATAACAAATAAAATATAGGTTAACTATTATTTTGGTCTCATATTTTAAAGTTTGTTCAATTTTAGTTTCTATATTTTCAATTGTCCAATTTTAGTCCCTATAATTTTTATAAATTTTAAATTTAGTCTCCAATGTTAGTTTGTTTTTTTAAAAAAAATATTTTTATTATCTATAGTATTTTTACTATAAATTTTAAAAATATACTCAAATATTGTATTTTCTTGCATGAAAATTATTATTATTATTTAATCGATTTATTTTTACCTTTGAGAAACTAAATTTAATAATTATTGAAAGTATGGGAATTAAAATTGAATAATTAAAAGTATAGAAATTAAAATTGAATAAACTTCAAAGTAAGAGACCAAATTGATATTTTAACTTAAAATATAATATCAAGTATCTTGTTGTGTCCGTAAAATATATTTAAATAATTAGTTTGAGTAATGCTTTTCTATACTAAAATTGTTGTCAAATTAGGTAAATGACACATTGTGTTAAAATATTACATGTGACTTATTTATTTATTTTTAGTTCAAACGAGAATAATGTGGGACTCGACCATTTTTTTTCTTTTGAAGTTTTATGTTAGAACATGTTTTTAACAAGACGTCTAATTTGACTGTTGATAATGTGTTAACAATCATTATTATGCTTTGCAACAATTTTTTCTCTTAAGCAAATAAATCCTTATTGTTATAAAAATTTTATTTGAAAAGTCACTAATGTGTAAAATATGTTAAATGAATGAAATGTATGAATCTTACAATGTCATAAGACACAAAAGCTTTATCTTAAAAGAAGAAACCGTTTTGCCATATGACTTAAAGCCTTTCTCAAAATAGATTAGTGTGATCTCTTCCTCCTAAGTTCTATTATGCTAACAACTAGTAATTAATATATTACAACGAACTTAAATTGAATTTTTTTTATACTACAATAGTACGTGTAATTCTATTTCATATTTGACATGTAATTATATGATAAAATTGGCAAAATATACTTTCGATCCAGAGATTTAGAGTTAGGATTTATTTGGTCCCTGATTTGAAAGGAATAATCTAGTCTCAAGTTTGAAAAATACTTCTAAATGATTATTGAGTTAATTTAACCGTTAGTTACTAAAGTGTCTATTCTAAAATTTTAAGAATTAAAGTATCTCTCTTGAAACTTCAAATTTTAGAGACTAAAAGTATATTTTGTCATATAATTTTTTTTTTTTTTTTTTTTGACAAATAATGACATAACTTGATATTTATATCGTGAGACATGGGGAATTTTAAATTGATAGCAAAAAATTATTATGAAGACAATGTAGAATCGAATAATTTTTAGATTGGAGACAAAATATGTTTAAAACGAGTCATACTTGGAAATGAAATTTGCCGTTTCCGTACAAAATTGTGTGTATAAATAACGTCATATTGCCTTTCCCAATATAAATGCCTTTTCAATTCTCTCTCCCTCAATTTTTCTAAATGGTTTTCTCAATGTTTTAAATTTTGTGTTCTCTCTCCTTCCATTTTATGTTCACCATGATCTTTGATCTAAAAAATTAATCACTTCATTTATACATACTTGCTATAAGGCACATGCATGGCACGTGGTCAAATTTTTTTTTTTTAATATCTATATTGGTGAAATTACCAAATGAATTTAAATTTTAGGGCTTCTATACTAATAGCTTAATTAAATAGGTCAAATTATAAAAATGTCTCAAATCTTTTTTCCATGAATAACCTATAATTTAATCAACTTGATTTATTTTAAAAACTATTTTTTCAGCTTTCAAAACATGACTTGTTTCTTTAAAATATTGGTAGAAAGTAAATGATCAAGCAAAACAGTTTAGCGGTGAAATTGGTATTTAAAGGTTTAATTTTTAAAATCTAAAAACTAAAAATTAAATGGTTACTAAACGAGACTTTAATTTTTGGTTTAAATCCTATTTTAGTCTCTGAACTTTGAATTTTGTTCTATTTTGGTTTTAGTCCCTAAACTTTTAAAAAGTGTTTATTTTAGTCTCTCCTATTAAAATTATGTAACTCTTCAATAGAAATGTGAGGGAGCTTATATTTTTGGATGACTAAGCTCTAAATGTATTAAGGAAGATGAAGGTGAAGTAAAATGTCAACAACCAACACACCTGACCAAAATTTTGTACTAAAAATGTTTTTTAAATTCTCCCACTTTGCCACTTATTTGGTAGCCTAGTCATTCAAAAATGCAAGTTACCTAGCTATTTTGTTAAAAAGTTGACAAAATCTTAATACAAGAACTAAAATAAACATTTTTTTTAAGTTCAGAGACTAAAATAAACATTTTTAAAAGTTTAGGGACCAAAATAAAACAATATTCAAAGTTGAGGAACTAAAATGGACATTTTTAAAAGCTTATGGACAAAAATAGAACATTATTCAAAGTTTAGAGACCAAAATAAGATTTAAACCTTAATTTTTTGTTTCTAAAATTTGTGTTTATGTTCTCACGCTTTATTAGCAACAATTTCCTCTTACCTAAGAAAACATTTGAATTAAAAGCCAAATTCTAAAAACAAAAATAAGTATGTAAACACTTACTTTTTTTTTTTTTTTCTTTTCCAAAACTTGACTTAGATTTTAAAAACATTACAATACTAAGAACTAACTAGTTATCAAACGAGACTCTAACCAATCTCATCATATCCACTGTGATTCATATAGTAGGCTAAGGATCATAAAATGTAAGTAATCTTCAAGTCATGCCTTTTTCAGCTTCTTCTGGCCAACAATGGTAGCAGATAAGTGCAAAGCAGCAGAAGGGAGGGAAGGCATTCTTCAACTGACTAATTGTATAATCCTTAATCCTATATGTTTTCATTTTCAACTTTTTCCTGCTAACTCAATAAGATATGTAAGAGAGATGTAATTTTGTATGCCTGATTTATGGTTTTCATCCTGATATCCTGATGTCCTGATATCTTCTGAACTCTCTTAGCTTATCAGCTGGGGTTTCCACAACATGATCCAGTTTCCTATCAGTCCCTCATCAGGTTGGGTTGGGAGCTATAGTATAATTTGCAAATTTATTCCCTTAAAGGCTCTAAAGATTGCTCATAGGTCGCATTCTTATTTACTGAAGTTGGGCGGCGAATACGAAACCAGTTGGATAAAGTCAATTTGAGATATAATATGCTACAACAGTGCTGGATTGAACAAAAAAGGGATCTCAGTATGGCCAATATATAAAACTGCCATGAACAAAAACCACTAGGAATATGTTTTGAACAGAGCATCTGTCCCTAAATTGACTTCGAATATGAAAAACAGAAATGGTAAGAAAAAAAATATGGCACTTCATAACTAGGGGACAACTACAAGATAAACAAACGCAGGTATGACCTTAACTATTGACAAGTAGAGTAAAATGCCTAATCTCTGCCAGACTTTCTCCCAACTATTGTTTAGATATCTGAATATAGACCATTTGTGTGTATCCGTTAAATACAGAAGTCTCAAGTCGAGTTAAACCAAGCCGCTGGAACAAACCGTACCTGCCATCTTCGACAATAGGGCTGGAAACACGAGCAGGGTCATATCTAGTTTGATGTGTTAAGGAAGGGCCAGCAACAGGAGGGACCTCCCAATAAACATCAAGAATTGACTCCAGGTACCTGCTATTTTGGAAGTGCTCTGCATGGGAAATAGCCCTATTACTATGGTTAAAATCATCACGCATGTAGCCTCGGACACCCCACCAAGATTCATATGGTCCACAAAGTTCTTCTATATCCACTGCTTTCTCCCAGAACAACTTCCTTTTTGCTCTGATTCTAGCTTCATCACTGTCCTTGAAGCAACTGTGCCCACCTCCTAAATCAGAAATATAAAAGCATTTGCATTAAAATAAACTACAATCACATTAGTCGCAGACACAAACTCACAGTATCACTTTCAAATAAGAGGACGCAACTCTTGAAAACAATTTTGAATTCATTATGTCCTAGAGATACTAGGAGAATCACATGGATCAGTTCTAAATTTCTCATTAGATTTCACTCTTCTGTATTAAGGAAGGCTCCTTATGCGAAAATCCTTATCTGATTACCCAATAGATGATGTGAAGAAGAAACTGTGTTGTCTTTTTACCTACGCTTATTCATATACAGTATAAAAACAAAGCAAAGTGGAATAAGATACAAATGGATGAGCAGGCACCTCTAATATAGAATTGATCGCACATCTGCCTTAAAGAATAGTGATCTCCTGTACCAGTATCATAGTTATCCTCAAAAACAAGATGTTGAAAGCCAGCTTTCAGAGCCTGCTTTATTCTGCACTCATATTACAAGAAAACTTTTCAGCATACCAACTTGTGTAGTAGTTAGATGGGCAACAAAAATATTTGATCACATTGAAATTCTGCATACCTCTTTAGTTCATTCTGATGGTCATCAAAAAATACAAGGACTCGACTAAGATCATCAATTCCACGTTTTTTCATCACATTTTTCCAAGCAACACTTCCAAAATCTACAAAGTCCTTTCCAGCAAAGTACGTACAGTTAGCATCAACATAAGCAGGCCCTTTCTTCAAGTATTTTTCGGGGTGACGAGGTGACAGTGAAATAATTGGCGTGTATGGCATTGCTTGCCGCAGCACCCAAGTAGAGTGTCCCTTGAATGCACCACTCTCGATCATCAAATCTGGCTTTAGCCAACGAGCAATGAACCAAAGGCCAAAGCTGTGGTCAAAGCCCATCCCATACATGTTATTTTTTATGGGACGGGTCTCATAAATTGGTACAAACTCTTCCAAGGCTTTTAGTAAATCTTTTGCAGTCCATTCCACTGTCTTTCCATGTTTCGATCTGCCTTTTGACAAGGATGGGATTATAAGGATTCAAACAAGCAACAAGTTTAGAAATTTCATGACATTTAATCAAACTAGAACCTAGAATAGTGAAGTCGGTGAGAATAGAACTAGTTCATTTATAATGAAACTTAATCGTAATCCAGAAAATTCAACATTATTAAATATTATCATGAATGTTTGAGTCTCAGTCTACACTGTTGTGACATAACTAGAAACTAACCAAGCTATTACTCGAGGAACATATCATCACTGAGGCCAGAACAGGTAGTCCAAGACTGAGTAAGGAGAAACTAGGAACTTATTACAACAAATCGCGGTACACAGATTCAATTCGACAAACGACGATGTATCCTTTTCATCATACGAAAAACAAATTAATTATAGTTCTGCATCTAACTTGCACAATGTGGATGACATCCATAAGCACTGAACACGGATCTAAAACTCAAAATGTCCAGAAAACTACAATGGATCGGAAAAAAATTCAAAGGGATAAACAAGAAAACTTACACCAGGGCACACCAAGAGAGCCGAAATCTGAATCCAGCCCGTCCATGCCGAAGAACCCAGAACGGGAAACAGGATCATAA

mRNA sequence

ATGCAACTGGAGCACCGTTCTTCTAGATCTGCTCTCTTTGATGACATCGAGGAGGGTGGTCTCAGGACTAGCTCTTCCGTTGAAATTAAAGAGCATGACAATGACAAAGCCCTCCATACTTTGGAAGATAGAGTTTCTATTCTGAAGAGGGGCACACCAAGAGAGCCGAAATCTGAATCCAGCCCGTCCATGCCGAAGAACCCAGAACGGGAAACAGGATCATAA

Coding sequence (CDS)

ATGCAACTGGAGCACCGTTCTTCTAGATCTGCTCTCTTTGATGACATCGAGGAGGGTGGTCTCAGGACTAGCTCTTCCGTTGAAATTAAAGAGCATGACAATGACAAAGCCCTCCATACTTTGGAAGATAGAGTTTCTATTCTGAAGAGGGGCACACCAAGAGAGCCGAAATCTGAATCCAGCCCGTCCATGCCGAAGAACCCAGAACGGGAAACAGGATCATAA

Protein sequence

MQLEHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGTPREPKSESSPSMPKNPERETGS
Homology
[Close]
BLAST of Lsi07G005140 vs. Swiss-Prot
Match: BET11_ARATH (Bet1-like SNARE 1-1 OS=Arabidopsis thaliana GN=BET11 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 5.0e-07
Identity = 29/49 (59.18%), Postives = 37/49 (75.51%), Query Frame = 1 

Query: 4  EHRSSRSALFDDIEEGGLRTSSSV--EIKEHDNDKALHTLEDRVSILKR 51
          E R  RS+LFD IEEGG+R +SS   EI EH+N++AL  L+DRV +LKR
Sbjct: 6  EPRGGRSSLFDGIEEGGIRAASSYSHEINEHENERALEGLQDRVILLKR 54

[Close]
BLAST of Lsi07G005140 vs. Swiss-Prot
Match: BET12_ARATH (Bet1-like SNARE 1-2 OS=Arabidopsis thaliana GN=BET12 PE=2 SV=4)

HSP 1 Score: 51.6 bits (122), Expect = 4.3e-06
Identity = 30/52 (57.69%), Postives = 37/52 (71.15%), Query Frame = 1 

Query: 4  EHRSSRSALFDD---IEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT 53
          E+R+SR++LFD    +EEG LR SSS    E DND+AL  L+DRVS LKR T
Sbjct: 6  ENRASRTSLFDGLDGLEEGRLRASSSYAHDERDNDEALENLQDRVSFLKRVT 57

[Close]
BLAST of Lsi07G005140 vs. TrEMBL
Match: A0A0A0L808_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G469700 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 3.2e-16
Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 1 

Query: 4  EHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT 53
          EHRSSRSALFDD+EEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKR T
Sbjct: 6  EHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLT 54

[Close]
BLAST of Lsi07G005140 vs. TrEMBL
Match: A0A068TSF4_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00026251001 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.4e-08
Identity = 32/49 (65.31%), Postives = 41/49 (83.67%), Query Frame = 1 

Query: 4  EHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT 53
          + RSSR+ALFDD+EEGGLR SSS ++ EH N+KA+ +L+DRVS LKR T
Sbjct: 6  DQRSSRAALFDDLEEGGLRASSSRDVDEHGNEKAIESLQDRVSFLKRLT 54

[Close]
BLAST of Lsi07G005140 vs. TrEMBL
Match: M5XWV5_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa020438mg PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.6e-07
Identity = 34/51 (66.67%), Postives = 40/51 (78.43%), Query Frame = 1 

Query: 4  EHRSSRSALFDDIEEGGLRTSSSV--EIKEHDNDKALHTLEDRVSILKRGT 53
          EHRSS+SAL D +EEGGLR SSS   +I EHDNDKA+ +L+DRV  LKR T
Sbjct: 1  EHRSSKSALLDGLEEGGLRASSSYSHDINEHDNDKAVQSLQDRVVFLKRLT 51

[Close]
BLAST of Lsi07G005140 vs. TrEMBL
Match: M0S500_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 2.7e-07
Identity = 34/51 (66.67%), Postives = 41/51 (80.39%), Query Frame = 1 

Query: 4  EHRSSRSALFDDIEEGGLRTS--SSVEIKEHDNDKALHTLEDRVSILKRGT 53
          +HRS+R+ALFD IEEGG+R S  SS EI EHDND A+  L+DRV+ILKR T
Sbjct: 6  DHRSNRAALFDGIEEGGIRASAYSSHEIHEHDNDLAIEGLQDRVNILKRLT 56

[Close]
BLAST of Lsi07G005140 vs. TrEMBL
Match: B9HUB3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s08490g PE=4 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 2.7e-07
Identity = 34/49 (69.39%), Postives = 40/49 (81.63%), Query Frame = 1 

Query: 4  EHRSSRSALFDD-IEEGGLRTSSSV--EIKEHDNDKALHTLEDRVSILK 50
          EHR+SR+ALFDD +EEGGLR SSS   E  +HDNDKA+HTL+DRV  LK
Sbjct: 9  EHRNSRTALFDDGLEEGGLRPSSSFSHETDDHDNDKAVHTLQDRVLFLK 57

[Close]
BLAST of Lsi07G005140 vs. TAIR10
Match: AT3G58170.1 (AT3G58170.1 BET1P/SFT1P-like protein 14A)

HSP 1 Score: 54.7 bits (130), Expect = 2.8e-08
Identity = 29/49 (59.18%), Postives = 37/49 (75.51%), Query Frame = 1 

Query: 4  EHRSSRSALFDDIEEGGLRTSSSV--EIKEHDNDKALHTLEDRVSILKR 51
          E R  RS+LFD IEEGG+R +SS   EI EH+N++AL  L+DRV +LKR
Sbjct: 6  EPRGGRSSLFDGIEEGGIRAASSYSHEINEHENERALEGLQDRVILLKR 54

[Close]
BLAST of Lsi07G005140 vs. TAIR10
Match: AT4G14455.1 (AT4G14455.1 Target SNARE coiled-coil domain protein)

HSP 1 Score: 51.6 bits (122), Expect = 2.4e-07
Identity = 30/52 (57.69%), Postives = 37/52 (71.15%), Query Frame = 1 

Query: 4  EHRSSRSALFDD---IEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT 53
          E+R+SR++LFD    +EEG LR SSS    E DND+AL  L+DRVS LKR T
Sbjct: 6  ENRASRTSLFDGLDGLEEGRLRASSSYAHDERDNDEALENLQDRVSFLKRVT 57

[Close]
BLAST of Lsi07G005140 vs. NCBI nr
Match: gi|659093420|ref|XP_008447528.1| (PREDICTED: bet1-like SNARE 1-2 isoform X2 [Cucumis melo])

HSP 1 Score: 92.0 bits (227), Expect = 4.6e-16
Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 1 

Query: 4  EHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT 53
          EHRSSRSALFDD+EEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKR T
Sbjct: 6  EHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLT 54

[Close]
BLAST of Lsi07G005140 vs. NCBI nr
Match: gi|449467371|ref|XP_004151397.1| (PREDICTED: bet1-like SNARE 1-2 isoform X1 [Cucumis sativus])

HSP 1 Score: 92.0 bits (227), Expect = 4.6e-16
Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 1 

Query: 4  EHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT 53
          EHRSSRSALFDD+EEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKR T
Sbjct: 6  EHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLT 54

[Close]
BLAST of Lsi07G005140 vs. NCBI nr
Match: gi|659093418|ref|XP_008447527.1| (PREDICTED: bet1-like SNARE 1-2 isoform X1 [Cucumis melo])

HSP 1 Score: 92.0 bits (227), Expect = 4.6e-16
Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 1 

Query: 4  EHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT 53
          EHRSSRSALFDD+EEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKR T
Sbjct: 6  EHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLT 54

[Close]
BLAST of Lsi07G005140 vs. NCBI nr
Match: gi|661897478|emb|CDO99190.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 65.9 bits (159), Expect = 3.5e-08
Identity = 32/49 (65.31%), Postives = 41/49 (83.67%), Query Frame = 1 

Query: 4  EHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRGT 53
          + RSSR+ALFDD+EEGGLR SSS ++ EH N+KA+ +L+DRVS LKR T
Sbjct: 6  DQRSSRAALFDDLEEGGLRASSSRDVDEHGNEKAIESLQDRVSFLKRLT 54

[Close]
BLAST of Lsi07G005140 vs. NCBI nr
Match: gi|743858697|ref|XP_011030529.1| (PREDICTED: bet1-like SNARE 1-2 [Populus euphratica])

HSP 1 Score: 65.1 bits (157), Expect = 6.0e-08
Identity = 36/52 (69.23%), Postives = 43/52 (82.69%), Query Frame = 1 

Query: 4  EHRSSRSALFDD-IEEGGLRTSSSV--EIKEHDNDKALHTLEDRVSILKRGT 53
          EHR+SR+ALFDD +EEGGLR+SSS   E  +HDNDKA+HTL+DRV  LKR T
Sbjct: 6  EHRNSRTALFDDGLEEGGLRSSSSFSHETDDHDNDKAVHTLQDRVLFLKRLT 57

The following BLAST results are available for this feature:
BLAST of Lsi07G005140 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BET11_ARATH5.0e-0759.18Bet1-like SNARE 1-1 OS=Arabidopsis thaliana GN=BET11 PE=1 SV=1[more]
BET12_ARATH4.3e-0657.69Bet1-like SNARE 1-2 OS=Arabidopsis thaliana GN=BET12 PE=2 SV=4[more]
BLAST of Lsi07G005140 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L808_CUCSA3.2e-1695.92Uncharacterized protein OS=Cucumis sativus GN=Csa_3G469700 PE=4 SV=1[more]
A0A068TSF4_COFCA2.4e-0865.31Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00026251001 PE=4 SV=1[more]
M5XWV5_PRUPE1.6e-0766.67Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa020438mg PE=4 S... [more]
M0S500_MUSAM2.7e-0766.67Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1[more]
B9HUB3_POPTR2.7e-0769.39Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s08490g PE=4 SV=2[more]
BLAST of Lsi07G005140 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G58170.12.8e-0859.18 BET1P/SFT1P-like protein 14A[more]
AT4G14455.12.4e-0757.69 Target SNARE coiled-coil domain protein[more]
BLAST of Lsi07G005140 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659093420|ref|XP_008447528.1|4.6e-1695.92PREDICTED: bet1-like SNARE 1-2 isoform X2 [Cucumis melo][more]
gi|449467371|ref|XP_004151397.1|4.6e-1695.92PREDICTED: bet1-like SNARE 1-2 isoform X1 [Cucumis sativus][more]
gi|659093418|ref|XP_008447527.1|4.6e-1695.92PREDICTED: bet1-like SNARE 1-2 isoform X1 [Cucumis melo][more]
gi|661897478|emb|CDO99190.1|3.5e-0865.31unnamed protein product [Coffea canephora][more]
gi|743858697|ref|XP_011030529.1|6.0e-0869.23PREDICTED: bet1-like SNARE 1-2 [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0061025 membrane fusion
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005484 SNAP receptor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi07G005140.1Lsi07G005140.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12791GOLGI SNARE BET1-RELATEDcoord: 1..50
score: 1.8
NoneNo IPR availablePANTHERPTHR12791:SF36BET1-LIKE SNARE 1-2coord: 1..50
score: 1.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi07G005140Csa3G469700Cucumber (Chinese Long) v2culsiB236
Lsi07G005140MELO3C012982Melon (DHL92) v3.5.1lsimeB436
Lsi07G005140MELO3C012982.2Melon (DHL92) v3.6.1lsimedB456
Lsi07G005140CsaV3_3G023820Cucumber (Chinese Long) v3cuclsiB255
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi07G005140Bottle gourd (USVL1VR-Ls)lsilsiB062
Lsi07G005140Bottle gourd (USVL1VR-Ls)lsilsiB117
Lsi07G005140Cucumber (Gy14) v1cgylsiB581
Lsi07G005140Cucurbita maxima (Rimu)cmalsiB150
Lsi07G005140Cucurbita maxima (Rimu)cmalsiB256
Lsi07G005140Cucurbita maxima (Rimu)cmalsiB361
Lsi07G005140Cucurbita maxima (Rimu)cmalsiB450
Lsi07G005140Cucurbita maxima (Rimu)cmalsiB736
Lsi07G005140Cucurbita maxima (Rimu)cmalsiB845
Lsi07G005140Cucurbita moschata (Rifu)cmolsiB137
Lsi07G005140Cucurbita moschata (Rifu)cmolsiB174
Lsi07G005140Cucurbita moschata (Rifu)cmolsiB244
Lsi07G005140Cucurbita moschata (Rifu)cmolsiB349
Lsi07G005140Cucurbita moschata (Rifu)cmolsiB437
Lsi07G005140Cucurbita moschata (Rifu)cmolsiB727
Lsi07G005140Cucurbita moschata (Rifu)cmolsiB829
Lsi07G005140Cucurbita pepo (Zucchini)cpelsiB127
Lsi07G005140Cucurbita pepo (Zucchini)cpelsiB276
Lsi07G005140Cucurbita pepo (Zucchini)cpelsiB472
Lsi07G005140Cucurbita pepo (Zucchini)cpelsiB516
Lsi07G005140Cucurbita pepo (Zucchini)cpelsiB574
Lsi07G005140Wild cucumber (PI 183967)cpilsiB235
Lsi07G005140Wild cucumber (PI 183967)cpilsiB546
Lsi07G005140Cucumber (Chinese Long) v2culsiB532
Lsi07G005140Melon (DHL92) v3.5.1lsimeB430
Lsi07G005140Melon (DHL92) v3.5.1lsimeB442
Lsi07G005140Watermelon (Charleston Gray)lsiwcgB387
Lsi07G005140Watermelon (Charleston Gray)lsiwcgB406
Lsi07G005140Watermelon (97103) v1lsiwmB426
Lsi07G005140Watermelon (97103) v1lsiwmB438
Lsi07G005140Cucumber (Gy14) v2cgyblsiB222
Lsi07G005140Cucumber (Gy14) v2cgyblsiB502
Lsi07G005140Melon (DHL92) v3.6.1lsimedB451
Lsi07G005140Melon (DHL92) v3.6.1lsimedB461
Lsi07G005140Silver-seed gourdcarlsiB109
Lsi07G005140Silver-seed gourdcarlsiB182
Lsi07G005140Silver-seed gourdcarlsiB520
Lsi07G005140Silver-seed gourdcarlsiB685
Lsi07G005140Silver-seed gourdcarlsiB939
Lsi07G005140Cucumber (Chinese Long) v3cuclsiB149
Lsi07G005140Cucumber (Chinese Long) v3cuclsiB568
Lsi07G005140Watermelon (97103) v2lsiwmbB397
Lsi07G005140Watermelon (97103) v2lsiwmbB405
Lsi07G005140Watermelon (97103) v2lsiwmbB420
Lsi07G005140Wax gourdlsiwgoB557
Lsi07G005140Wax gourdlsiwgoB578