CsGy3G023210 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G023210
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	bet1-like SNARE 1-2
Location	Chr3 : 22755780 .. 22759453 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCGAACCCGGCTCTAATTTATTATAACTAAACCTGAAATATTTAGTATGTAAAAGGCCGAAGCCCATTACTATTCGCCGTAGCTGGGATGCCCGTACCCGTTTTTAATATAGAAACCTACAATAGCCATCATCTTTTTATTTATTTGTGTTATGTATATTTTATTTTTCCATCTAAGCTGAAGTTCTGGCCGAAGAAGAACGCTTTTCGTTGAACTGAGCCCCCGTGATGAGTTACAGAAGGTTCGTATCCAAATTCTTCGTCGATGTACACACTTTACTTTGTTTTACTTAACTATACCACCACTCTGCCTTCCATTACTGTCTCAATTTTCTGATTTCTGCCTTCTTTTGTTGTTATTTTCATTCATCAGCTCCCTCAAGTTGCTTGCTTCTATGAATTGGTTCTGATCTTGTGTTATAATTCCATTATGATTTAAGTCTGAGTTCTTAATCAACAATTTGGCTTAAAATGGTATGAAATAAACCGTAGATCGCTGTATCAATTCGTACGGTAGGATATGGCTTTTCGATCTGGTTGCATATCCCTGACACACACAAGTGTGTGAATCCTATGACGACTTGAAAAAATCTACAACTTTATATTAGCTTTCCATTTCCTTCTTTGGTTTTGAGTCTTTGTTCGAGTTTTGAATAGTAATTTGACTGAAAGCATAATGAAGGTCAAATATATTCTCAATTCTGGAATCCTGGATGTTAGGTTTCTTTCTCCTTGCTAACATTGAGTTAAATTGTAGCCATTTTCTTATTCTACTACTTAAAATTTGTTAGACACAAACATTGGTGTTGTTCTTGGATATCACTGTCTCTCCTTGTATAAGAATTTGTATATTGTTTCGTTTGAAATAGCTGGTATTGTTTTTGTTCGTAGGGAGCACCGTTCTTCTAGATCTGCTCTCTTTGATGACCTTGAGGAGGGCGGCCTGAGGACTAGCTCTTCAGTTGAAATTAAAGAGCATGACAATGACAAAGCCCTCTATACTTTGGAAGATAGAGTTTCTATTCTGAAAAGGGTAAATTTTACGCAGAGAGACGCTTCTTAATTATTAATTTATTCATCTCCTATCTTTTATATAAAAGGTTGTTATGATTGAACACATTATATCCTATCCTTTTGAAGCAATTAGGATAGGTTGAATGTCATAAGTTGAAGTGACTCTTGACATAATGATACTGTCTTAGCCATTTTACTAAGTAAACTGTTTTTAAAACAATTATTTTGACATTGAAATCCTGCTGCATGAGCATCTTAAATTATTATTCAGATGGTTTTGCAATCCAGTAATTCATCCTCTTGCTTCAGATAATTTAATCATAGAAAATGAATGGGAAAAAGGATGCAATGCTTTTTTCTTTCAGAATTTCTTCTATATTTGTGCATTTAGCAGCTGAATTTGAGTGTGATGATGAGCTTTCCTTCAAGTATGATCATAGGTGTTGCCTGAAAGTGTCGTACCATTTGATGCAAATGACTTGTATGCTCAAAGAGCTCTGGAATAGGCGAACTAATTGAGTGGTTTCATTAGTTTAGACTAGTGGTATAAAGAACTCTCGGATATAATAAGTGGTTATAGGTCTAAAGACTCCAAATTCCCTTTTAATGACTAATGACTGATGGTTAATTTTCTGTTTTGTCACTACCTAAAATGGTGAATTGGTGTAAAAGGATTGCTGTTGCAGTGCAACATGAGATAGTACTTAAAGTAACTCTTTGTTTCATATAGATACAGTGCAAATGATCACTTGATATCTCCGTCCTCGCTTAATATAAACACCAAAGATGAGGGTTTTCTTAGTACTTCCATAATGGTGCTTATAGTTTCCATTTCCAGCAAGAAAGAATTCTGTTCCCCCTCCTCGATTTGTCTTCTTAATTGAGCAACTTTTGATGTATATATTGTTTGAAATAGTTGACAGGTGACATTCACGAAGAAGTGGAGAGTCATAATCATTTGCTTGACCGGATGGTATGTTGTTTCTTCAAGGTGATTTATGTCTGTCTTGTGAGTTGAAATGATTGGATCGTGTTTCTTTATGTGGATTTTATTCTAATCAGGGAAATGGCATGGATGCTTCAAGGGGTATAATGTCAAGAACCATGGATCGATTCAAGATGGTAATTGATCTAGCTCTTTTCAGCTTATTTTATTTAGGGGAAAATGTGGTTTTATCTTATATATATACATGCCTTTAATAGGAAGGAAGAAGATGATGAGATAGAGATTTTTTTCTTTTGTAATTCTTGATGTTCGATTAGAGATTTTTTTTTTCGGATTTGGGTTTCTTCTTTGTAATTTCATTCCATCAATAACCTTTCTTGTTTGATAACCATTTGACTTTTGATTTTTAGTTTCTAAAAAAATGAGACTCCTCTAAATTGTTGGCTTTGTTATCTACTATTTTCCAACGTTTTAAAAACCAAAGTAGTTTTTAAAAACTTGTTTTTGTTTTTTTGGAATTGGCTAAGAATTCAACTTTACTTAAGAAAAATGCAAATCATCGTAAGAAATTTAGAGGAAATAGACTTAATTAAAAAAAAAAAAAACGAAATAGTTAATGATGGATGTCTAAAAGATGAGAAATCAAGCCCAGAAAAATTGGCAGTACATTCTCTATTTGCATGCATTCTCCTAATACAAACATTCATGTTCTACAGGTTTTCGAGCAAAAAACGAAGTGGAGAACTTGTAGACTTGCATTGTATTTTGTATTGTCCTTCTTACTTCTTTTCTATCTCATCAGGTAAGAATTTAGCTCAGCTGAGGGTATCATTTTTTCAAACATTGCTCTCTTTTGCAATCCATGCTGTTTGGTCAAACTACCAAATTTTTGCCTTCATTAAATTAGACCCTTTCATTGAGTTCTTTTAAATTTATCGAAATTTTCATCTACGTTGTTATATTAACAGCTTGCCGTGATGTTTTAGCAAGTATTTATTCCACTAATTCTTTGTTGGAATGTTCAGTTTTCTTTTATATAGAAGGGAATGCAGTTTTAATATCCTTCTCTTTTCTTGCATTTGAGCCTTTAAATTCAAACCTATCCATTTTTGTATTTCATTTTCATTGGCATATTCCATTTGCAGGTTCCTCAGATACTTCATGCAAAGTTGAAGTAAGATTTCTATGTTGAATCAACTCGAAGTATTGCACAACTGTGACGACCTTGCATAGTCCTTGTTTCCACAAGAACACTGAAATACAGACCGTACTTTCCTGCAATACAAGATTTGTCAAAATGCATAGTTTCTGCTTCGAAGGAGTGGAACAGATGGTCATTTTTTTTAATCACTATTCTTAATTAATTTTTTTATGGGTTAAAAGGCCATATCCGTCAGTTTAGGTATATATATATCTTGATTTAAATCATGAGTATATTTTGCTCATGCTTAATAAGGTTTTATTTTCAGGCTAGTACAGGACACACTATCTCATTGACTCCCATTTTGAATCAGTATATTTGGGCAGGTTTGAAACTGGATTTTGTTCTATTGACCTAAACTAAATTAGAATCATTTAGTTGCAATTATCGGACTAGTTTTCTTGATCTTGGAAGTATACGAATTTGGCGATTCCATGTCCATTTGCGTAGTTTGTAAACAAATGTTAAATTCCACCTTTTCAGTTTTCACGCCCACCAAAACCCTAATTTCTA

mRNA sequence

CCCGAACCCGGCTCTAATTTATTATAACTAAACCTGAAATATTTAGTATGTAAAAGGCCGAAGCCCATTACTATTCGCCGTAGCTGGGATGCCCGTACCCGTTTTTAATATAGAAACCTACAATAGCCATCATCTTTTTATTTATTTGTGTTATGTATATTTTATTTTTCCATCTAAGCTGAAGTTCTGGCCGAAGAAGAACGCTTTTCGTTGAACTGAGCCCCCGTGATGAGTTACAGAAGGGAGCACCGTTCTTCTAGATCTGCTCTCTTTGATGACCTTGAGGAGGGCGGCCTGAGGACTAGCTCTTCAGTTGAAATTAAAGAGCATGACAATGACAAAGCCCTCTATACTTTGGAAGATAGAGTTTCTATTCTGAAAAGGTTGACAGGTGACATTCACGAAGAAGTGGAGAGTCATAATCATTTGCTTGACCGGATGGGAAATGGCATGGATGCTTCAAGGGGTATAATGTCAAGAACCATGGATCGATTCAAGATGGTTTTCGAGCAAAAAACGAAGTGGAGAACTTGTAGACTTGCATTGTATTTTGTATTGTCCTTCTTACTTCTTTTCTATCTCATCAGGTTCCTCAGATACTTCATGCAAAGTTGAAGTAAGATTTCTATGTTGAATCAACTCGAAGTATTGCACAACTGTGACGACCTTGCATAGTCCTTGTTTCCACAAGAACACTGAAATACAGACCGTACTTTCCTGCAATACAAGATTTGTCAAAATGCATAGTTTCTGCTTCGAAGGAGTGGAACAGATGGTCATTTTTTTTAATCACTATTCTTAATTAATTTTTTTATGGGTTAAAAGGCCATATCCGTCAGTTTAGGTATATATATATCTTGATTTAAATCATGAGTATATTTTGCTCATGCTTAATAAGGTTTTATTTTCAGGCTAGTACAGGACACACTATCTCATTGACTCCCATTTTGAATCAGTATATTTGGGCAGGTTTGAAACTGGATTTTGTTCTATTGACCTAAACTAAATTAGAATCATTTAGTTGCAATTATCGGACTAGTTTTCTTGATCTTGGAAGTATACGAATTTGGCGATTCCATGTCCATTTGCGTAGTTTGTAAACAAATGTTAAATTCCACCTTTTCAGTTTTCACGCCCACCAAAACCCTAATTTCTA

Coding sequence (CDS)

ATGAGTTACAGAAGGGAGCACCGTTCTTCTAGATCTGCTCTCTTTGATGACCTTGAGGAGGGCGGCCTGAGGACTAGCTCTTCAGTTGAAATTAAAGAGCATGACAATGACAAAGCCCTCTATACTTTGGAAGATAGAGTTTCTATTCTGAAAAGGTTGACAGGTGACATTCACGAAGAAGTGGAGAGTCATAATCATTTGCTTGACCGGATGGGAAATGGCATGGATGCTTCAAGGGGTATAATGTCAAGAACCATGGATCGATTCAAGATGGTTTTCGAGCAAAAAACGAAGTGGAGAACTTGTAGACTTGCATTGTATTTTGTATTGTCCTTCTTACTTCTTTTCTATCTCATCAGGTTCCTCAGATACTTCATGCAAAGTTGA

Protein sequence

MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALYTLEDRVSILKRLTGDIHEEVESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLFYLIRFLRYFMQS

Homology

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BLAST of CsGy3G023210 vs. NCBI nr
Match: XP_004151397.1 (PREDICTED: bet1-like SNARE 1-2 isoform X1 [Cucumis sativus] >KGN58055.1 hypothetical protein Csa_3G469700 [Cucumis sativus])

HSP 1 Score: 240.7 bits (613), Expect = 2.7e-60
Identity = 127/128 (99.22%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALYTLEDRVSILKRLTGDIHEE 60
           MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKAL+TLEDRVSILKRLTGDIHEE
Sbjct: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEE 60

Query: 61  VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLXXLIR 120
           VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLXXLIR
Sbjct: 61  VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLXXLIR 120

Query: 121 FLRYFMQS 129
           FLRYFMQS
Sbjct: 121 FLRYFMQS 128

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BLAST of CsGy3G023210 vs. NCBI nr
Match: XP_008447527.1 (PREDICTED: bet1-like SNARE 1-2 [Cucumis melo])

HSP 1 Score: 238.8 bits (608), Expect = 1.0e-59
Identity = 123/128 (96.09%), Postives = 125/128 (97.66%), Query Frame = 0


Query: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALYTLEDRVSILKRLTGDIHEE 60
           MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKAL+TLEDRVSILKRLTGDIHEE
Sbjct: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEE 60

Query: 61  VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLXXLIR 120
           VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYF+LSFLL   LIR
Sbjct: 61  VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFILSFLLFFYLIR 120

Query: 121 FLRYFMQS 129
           FLRYFMQS
Sbjct: 121 FLRYFMQS 128

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BLAST of CsGy3G023210 vs. NCBI nr
Match: XP_022138310.1 (bet1-like SNARE 1-2 [Momordica charantia])

HSP 1 Score: 230.3 bits (586), Expect = 3.6e-57
Identity = 119/128 (92.97%), Postives = 124/128 (96.88%), Query Frame = 0


Query: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALYTLEDRVSILKRLTGDIHEE 60
           M+YRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKAL++LEDRVSILKRLTGDIHEE
Sbjct: 2   MNYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHSLEDRVSILKRLTGDIHEE 61

Query: 61  VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLXXLIR 120
           VESHN+LLDRMGNGMDASRGIMSRTMDRFKMVFEQK KWRTCRLA+YFVLSF LL  LIR
Sbjct: 62  VESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKIKWRTCRLAVYFVLSFFLLFYLIR 121

Query: 121 FLRYFMQS 129
           FLRYFMQS
Sbjct: 122 FLRYFMQS 129

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BLAST of CsGy3G023210 vs. NCBI nr
Match: XP_022930222.1 (bet1-like SNARE 1-2 [Cucurbita moschata] >XP_023000563.1 bet1-like SNARE 1-2 [Cucurbita maxima] >XP_023513654.1 bet1-like SNARE 1-2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 222.6 bits (566), Expect = 7.5e-55
Identity = 117/129 (90.70%), Postives = 124/129 (96.12%), Query Frame = 0


Query: 1   MSYRREHRSSRSALFDDLEEGGLRTS-SSVEIKEHDNDKALYTLEDRVSILKRLTGDIHE 60
           MSYRREHRSSRSALFDDLEEGGLR S S+VEIKEHDND+AL TLEDRVSILKRLTGDIHE
Sbjct: 1   MSYRREHRSSRSALFDDLEEGGLRASASAVEIKEHDNDRALLTLEDRVSILKRLTGDIHE 60

Query: 61  EVESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLXXLI 120
           EVESHN+LLDRMGNGMD+SRGIMSRTMDRFKMVFEQK+KWRTCRLA+YFVLSFLLL  LI
Sbjct: 61  EVESHNNLLDRMGNGMDSSRGIMSRTMDRFKMVFEQKSKWRTCRLAVYFVLSFLLLFYLI 120

Query: 121 RFLRYFMQS 129
           RFLR+FMQS
Sbjct: 121 RFLRFFMQS 129

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BLAST of CsGy3G023210 vs. NCBI nr
Match: XP_011651490.1 (PREDICTED: bet1-like SNARE 1-2 isoform X2 [Cucumis sativus])

HSP 1 Score: 179.5 bits (454), Expect = 7.3e-42
Identity = 91/92 (98.91%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALYTLEDRVSILKRLTGDIHEE 60
          MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKAL+TLEDRVSILKRLTGDIHEE
Sbjct: 1  MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEE 60

Query: 61 VESHNHLLDRMGNGMDASRGIMSRTMDRFKMV 93
          VESHNHLLDRMGNGMDASRGIMSRTMDRFKMV
Sbjct: 61 VESHNHLLDRMGNGMDASRGIMSRTMDRFKMV 92

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BLAST of CsGy3G023210 vs. TAIR10
Match: AT4G14455.1 (Target SNARE coiled-coil domain protein)

HSP 1 Score: 144.4 bits (363), Expect = 4.7e-35
Identity = 77/127 (60.63%), Postives = 101/127 (79.53%), Query Frame = 0


Query: 1   MSYRREHRSSRSALF---DDLEEGGLRTSSSVEIKEHDNDKALYTLEDRVSILKRLTGDI 60
           M++RRE+R+SR++LF   D LEEG LR SSS    E DND+AL  L+DRVS LKR+TGDI
Sbjct: 1   MNFRRENRASRTSLFDGLDGLEEGRLRASSSYAHDERDNDEALENLQDRVSFLKRVTGDI 60

Query: 61  HEEVESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLXX 120
           HEEVE+HN LLD++GN MD++RGIMS T++RFK+VFE+K+  ++C+L  YFVL FL++  
Sbjct: 61  HEEVENHNRLLDKVGNKMDSARGIMSGTINRFKLVFEKKSNRKSCKLIAYFVLLFLIMYY 120

Query: 121 LIRFLRY 125
           LIR L Y
Sbjct: 121 LIRLLNY 127

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BLAST of CsGy3G023210 vs. TAIR10
Match: AT3G58170.1 (BET1P/SFT1P-like protein 14A)

HSP 1 Score: 126.3 bits (316), Expect = 1.3e-29
Identity = 70/122 (57.38%), Postives = 90/122 (73.77%), Query Frame = 0


Query: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSV--EIKEHDNDKALYTLEDRVSILKRLTGDIH 60
           M+ RRE R  RS+LFD +EEGG+R +SS   EI EH+N++AL  L+DRV +LKRL+GDI+
Sbjct: 1   MNPRREPRGGRSSLFDGIEEGGIRAASSYSHEINEHENERALEGLQDRVILLKRLSGDIN 60

Query: 61  EEVESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLXXL 120
           EEV++HN +LDRMGN MD+SRG +S TMDRFK VFE K+  R   L   FV  FL++  L
Sbjct: 61  EEVDTHNRMLDRMGNDMDSSRGFLSGTMDRFKTVFETKSSRRMLTLVASFVGLFLVIYYL 120

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BLAST of CsGy3G023210 vs. Swiss-Prot
Match: sp|Q94CG2|BET12_ARATH (Bet1-like SNARE 1-2 OS=Arabidopsis thaliana OX=3702 GN=BET12 PE=2 SV=4)

HSP 1 Score: 144.4 bits (363), Expect = 8.5e-34
Identity = 77/127 (60.63%), Postives = 101/127 (79.53%), Query Frame = 0


Query: 1   MSYRREHRSSRSALF---DDLEEGGLRTSSSVEIKEHDNDKALYTLEDRVSILKRLTGDI 60
           M++RRE+R+SR++LF   D LEEG LR SSS    E DND+AL  L+DRVS LKR+TGDI
Sbjct: 1   MNFRRENRASRTSLFDGLDGLEEGRLRASSSYAHDERDNDEALENLQDRVSFLKRVTGDI 60

Query: 61  HEEVESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLXX 120
           HEEVE+HN LLD++GN MD++RGIMS T++RFK+VFE+K+  ++C+L  YFVL FL++  
Sbjct: 61  HEEVENHNRLLDKVGNKMDSARGIMSGTINRFKLVFEKKSNRKSCKLIAYFVLLFLIMYY 120

Query: 121 LIRFLRY 125
           LIR L Y
Sbjct: 121 LIRLLNY 127

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BLAST of CsGy3G023210 vs. Swiss-Prot
Match: sp|Q9M2J9|BET11_ARATH (Bet1-like SNARE 1-1 OS=Arabidopsis thaliana OX=3702 GN=BET11 PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.4e-28
Identity = 70/122 (57.38%), Postives = 90/122 (73.77%), Query Frame = 0


Query: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSV--EIKEHDNDKALYTLEDRVSILKRLTGDIH 60
           M+ RRE R  RS+LFD +EEGG+R +SS   EI EH+N++AL  L+DRV +LKRL+GDI+
Sbjct: 1   MNPRREPRGGRSSLFDGIEEGGIRAASSYSHEINEHENERALEGLQDRVILLKRLSGDIN 60

Query: 61  EEVESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLXXL 120
           EEV++HN +LDRMGN MD+SRG +S TMDRFK VFE K+  R   L   FV  FL++  L
Sbjct: 61  EEVDTHNRMLDRMGNDMDSSRGFLSGTMDRFKTVFETKSSRRMLTLVASFVGLFLVIYYL 120

[Close]

BLAST of CsGy3G023210 vs. Swiss-Prot
Match: sp|Q62896|BET1_RAT (BET1 homolog OS=Rattus norvegicus OX=10116 GN=Bet1 PE=1 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 9.2e-04
Identity = 30/114 (26.32%), Postives = 56/114 (49.12%), Query Frame = 0


Query: 11  RSALFDDLEEGGL----RTSSSVEIKEHDNDKALYTLEDRVSILKRLTGDIHEEVESHNH 70
           R+ L D    GG       +S     E +ND+   +L  +V+ +K L+ +I  EV++ N 
Sbjct: 3   RAGLGDGAPPGGYGNYGYANSGYNACEEENDRLTESLRSKVTAIKSLSIEIGHEVKNQNK 62

Query: 71  LLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLXXLIR 121
           LL  M +  D++ G + +TM R K++         C + L+ +  F ++  +I+
Sbjct: 63  LLAEMDSQFDSTTGFLGKTMGRLKILSRGSQTKLLCYMMLFSLFVFFVIYWIIK 116

[Close]

BLAST of CsGy3G023210 vs. TrEMBL
Match: tr|A0A0A0L808|A0A0A0L808_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G469700 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.8e-60
Identity = 127/128 (99.22%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALYTLEDRVSILKRLTGDIHEE 60
           MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKAL+TLEDRVSILKRLTGDIHEE
Sbjct: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEE 60

Query: 61  VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLXXLIR 120
           VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLXXLIR
Sbjct: 61  VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLXXLIR 120

Query: 121 FLRYFMQS 129
           FLRYFMQS
Sbjct: 121 FLRYFMQS 128

[Close]

BLAST of CsGy3G023210 vs. TrEMBL
Match: tr|A0A1S3BHN2|A0A1S3BHN2_CUCME (bet1-like SNARE 1-2 OS=Cucumis melo OX=3656 GN=LOC103489954 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 6.7e-60
Identity = 123/128 (96.09%), Postives = 125/128 (97.66%), Query Frame = 0


Query: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALYTLEDRVSILKRLTGDIHEE 60
           MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKAL+TLEDRVSILKRLTGDIHEE
Sbjct: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEE 60

Query: 61  VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLXXLIR 120
           VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYF+LSFLL   LIR
Sbjct: 61  VESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFILSFLLFFYLIR 120

Query: 121 FLRYFMQS 129
           FLRYFMQS
Sbjct: 121 FLRYFMQS 128

[Close]

BLAST of CsGy3G023210 vs. TrEMBL
Match: tr|A0A061ENL7|A0A061ENL7_THECC (Target SNARE coiled-coil domain protein OS=Theobroma cacao OX=3641 GN=TCM_020824 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.6e-37
Identity = 92/129 (71.32%), Postives = 106/129 (82.17%), Query Frame = 0


Query: 1   MSYRREHRSSRSAL---FDDLEEGGLRTSSSV--EIKEHDNDKALYTLEDRVSILKRLTG 60
           MSYRR+HRSS+SAL   FD LEEGGLR+SSS   EIKEH NDKA+ +L+DRV+ LKRLTG
Sbjct: 1   MSYRRDHRSSKSALFDGFDKLEEGGLRSSSSFSHEIKEHHNDKAVDSLQDRVAFLKRLTG 60

Query: 61  DIHEEVESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLL 120
           DIH+EVESHN LLDRMGNGMDA+RGIMS TMDRFK VFE+K+  R C L   FV+SFL++
Sbjct: 61  DIHDEVESHNRLLDRMGNGMDATRGIMSGTMDRFKKVFEKKSNRRMCTLVGGFVVSFLII 120

Query: 121 XXLIRFLRY 125
             LIR LRY
Sbjct: 121 YYLIRMLRY 129

[Close]

BLAST of CsGy3G023210 vs. TrEMBL
Match: tr|A0A2P4J077|A0A2P4J077_QUESU (Bet1-like snare 1-1 OS=Quercus suber OX=58331 GN=CFP56_44152 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.1e-37
Identity = 87/127 (68.50%), Postives = 104/127 (81.89%), Query Frame = 0


Query: 1   MSYRREHRSSRSALFDDLEEGGLRTSSSV--EIKEHDNDKALYTLEDRVSILKRLTGDIH 60
           MSYRREHR SRS+LFD LEEGGL  SSS   E  +HDND+A+ +L+DRV +LKR+TGDIH
Sbjct: 1   MSYRREHRGSRSSLFDGLEEGGLSASSSYSHETNDHDNDRAVDSLQDRVLLLKRVTGDIH 60

Query: 61  EEVESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLLXXL 120
           EEVESHN LLDRMGN MD+SRG+MS TMDRFKMVFE+K+  R C L + FV+SFL++  L
Sbjct: 61  EEVESHNCLLDRMGNDMDSSRGVMSGTMDRFKMVFEKKSNRRMCTLVICFVVSFLIILYL 120

Query: 121 IRFLRYF 126
           IR +RYF
Sbjct: 121 IRMVRYF 127

[Close]

BLAST of CsGy3G023210 vs. TrEMBL
Match: tr|A0A2G9HFY9|A0A2G9HFY9_9LAMI (V-SNARE OS=Handroanthus impetiginosus OX=429701 GN=CDL12_10955 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 8.0e-37
Identity = 89/131 (67.94%), Postives = 107/131 (81.68%), Query Frame = 0


Query: 1   MSYRREHRSSRSALFDD---LEEGGLRTSSSVE--IKEHDNDKALYTLEDRVSILKRLTG 60
           MSYRREHRSSR+ALFD+   LEEGGLR+SSS    I ++DN+K + TL DRVS LKRLTG
Sbjct: 2   MSYRREHRSSRAALFDNMDSLEEGGLRSSSSYSSGIDDYDNEKTMDTLHDRVSFLKRLTG 61

Query: 61  DIHEEVESHNHLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLALYFVLSFLLL 120
           DIHEEVESHN +LDR+GN MDASRGIMS T+DRFKMVFE+K+  R C+LA YFV++F +L
Sbjct: 62  DIHEEVESHNRMLDRVGNEMDASRGIMSGTIDRFKMVFEKKSNRRICKLAAYFVVAFFVL 121

Query: 121 XXLIRFLRYFM 127
             +IR L YF+
Sbjct: 122 YYIIRILLYFL 132

The following BLAST results are available for this feature:

BLAST of CsGy3G023210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004151397.1	2.7e-60	99.22	PREDICTED: bet1-like SNARE 1-2 isoform X1 [Cucumis sativus] >KGN58055.1 hypothet...	[more]
XP_008447527.1	1.0e-59	96.09	PREDICTED: bet1-like SNARE 1-2 [Cucumis melo]	[more]
XP_022138310.1	3.6e-57	92.97	bet1-like SNARE 1-2 [Momordica charantia]	[more]
XP_022930222.1	7.5e-55	90.70	bet1-like SNARE 1-2 [Cucurbita moschata] >XP_023000563.1 bet1-like SNARE 1-2 [Cu...	[more]
XP_011651490.1	7.3e-42	98.91	PREDICTED: bet1-like SNARE 1-2 isoform X2 [Cucumis sativus]	[more]

BLAST of CsGy3G023210 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G14455.1	4.7e-35	60.63	Target SNARE coiled-coil domain protein	[more]
AT3G58170.1	1.3e-29	57.38	BET1P/SFT1P-like protein 14A	[more]

BLAST of CsGy3G023210 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q94CG2\|BET12_ARATH	8.5e-34	60.63	Bet1-like SNARE 1-2 OS=Arabidopsis thaliana OX=3702 GN=BET12 PE=2 SV=4	[more]
sp\|Q9M2J9\|BET11_ARATH	2.4e-28	57.38	Bet1-like SNARE 1-1 OS=Arabidopsis thaliana OX=3702 GN=BET11 PE=1 SV=1	[more]
sp\|Q62896\|BET1_RAT	9.2e-04	26.32	BET1 homolog OS=Rattus norvegicus OX=10116 GN=Bet1 PE=1 SV=1	[more]

BLAST of CsGy3G023210 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L808\|A0A0A0L808_CUCSA	1.8e-60	99.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G469700 PE=4 SV=1	[more]
tr\|A0A1S3BHN2\|A0A1S3BHN2_CUCME	6.7e-60	96.09	bet1-like SNARE 1-2 OS=Cucumis melo OX=3656 GN=LOC103489954 PE=4 SV=1	[more]
tr\|A0A061ENL7\|A0A061ENL7_THECC	1.6e-37	71.32	Target SNARE coiled-coil domain protein OS=Theobroma cacao OX=3641 GN=TCM_020824...	[more]
tr\|A0A2P4J077\|A0A2P4J077_QUESU	2.1e-37	68.50	Bet1-like snare 1-1 OS=Quercus suber OX=58331 GN=CFP56_44152 PE=4 SV=1	[more]
tr\|A0A2G9HFY9\|A0A2G9HFY9_9LAMI	8.0e-37	67.94	V-SNARE OS=Handroanthus impetiginosus OX=429701 GN=CDL12_10955 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000727	T_SNARE_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G023210.1	CsGy3G023210.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:1.20.5.110		coord: 37..100 e-value: 5.7E-14 score: 53.8
None	No IPR available	PANTHER	PTHR12791:SF36	BET1-LIKE SNARE 1-2	coord: 1..126
None	No IPR available	PANTHER	PTHR12791	GOLGI SNARE BET1-RELATED	coord: 1..126
None	No IPR available	CDD	cd15853	SNARE_Bet1	coord: 33..90 e-value: 1.63074E-17 score: 70.9946
None	No IPR available	SUPERFAMILY	SSF58038	SNARE fusion complex	coord: 29..92
IPR000727	Target SNARE coiled-coil homology domain	PROSITE	PS50192	T_SNARE	coord: 30..92 score: 11.76

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G023210	Csa3G469700	Cucumber (Chinese Long) v2	cgybcuB119

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G023210	Cucumber (Gy14) v2	cgybcgybB118
CsGy3G023210	Cucurbita maxima (Rimu)	cgybcmaB311
CsGy3G023210	Cucurbita maxima (Rimu)	cgybcmaB346
CsGy3G023210	Cucurbita maxima (Rimu)	cgybcmaB361
CsGy3G023210	Cucurbita maxima (Rimu)	cgybcmaB461
CsGy3G023210	Cucurbita pepo (Zucchini)	cgybcpeB306
CsGy3G023210	Cucurbita moschata (Rifu)	cgybcmoB284
CsGy3G023210	Cucurbita moschata (Rifu)	cgybcmoB318
CsGy3G023210	Cucurbita moschata (Rifu)	cgybcmoB332
CsGy3G023210	Cucurbita moschata (Rifu)	cgybcmoB429
CsGy3G023210	Cucurbita pepo (Zucchini)	cgybcpeB349
CsGy3G023210	Cucurbita pepo (Zucchini)	cgybcpeB390
CsGy3G023210	Cucurbita pepo (Zucchini)	cgybcpeB400
CsGy3G023210	Cucumber (Chinese Long) v2	cgybcuB154
CsGy3G023210	Bottle gourd (USVL1VR-Ls)	cgyblsiB222
CsGy3G023210	Bottle gourd (USVL1VR-Ls)	cgyblsiB167
CsGy3G023210	Melon (DHL92) v3.5.1	cgybmeB161
CsGy3G023210	Melon (DHL92) v3.5.1	cgybmeB186
CsGy3G023210	Melon (DHL92) v3.6.1	cgybmedB161
CsGy3G023210	Melon (DHL92) v3.6.1	cgybmedB187
CsGy3G023210	Watermelon (Charleston Gray)	cgybwcgB166
CsGy3G023210	Watermelon (Charleston Gray)	cgybwcgB237
CsGy3G023210	Watermelon (97103) v1	cgybwmB174
CsGy3G023210	Watermelon (97103) v1	cgybwmB205
CsGy3G023210	Wild cucumber (PI 183967)	cgybcpiB110
CsGy3G023210	Wild cucumber (PI 183967)	cgybcpiB156
CsGy3G023210	Silver-seed gourd	carcgybB0125
CsGy3G023210	Silver-seed gourd	carcgybB0212
CsGy3G023210	Silver-seed gourd	carcgybB0739
CsGy3G023210	Silver-seed gourd	carcgybB1009
CsGy3G023210	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G023210	Cucumber (Chinese Long) v3	cgybcucB160
CsGy3G023210	Watermelon (97103) v2	cgybwmbB246
CsGy3G023210	Watermelon (97103) v2	cgybwmbB230
CsGy3G023210	Wax gourd	cgybwgoB260