Csa3G187300 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G187300
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionNicastrin, putative; contains IPR008710 (Nicastrin)
LocationChr3 : 13214879 .. 13217944 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAACGATGAAAGAAAGAAAAAAAAGCCCCGCCAAGTTCCCCAATTTTTCCCCTTGTCCGAAGGTCAATTTTCAGTTTAATTTCCCAACCCGATCTGGGTTCTCTAGTCCATTTCACCTTCACTAACGAGGAGCTGAGGTCCCCAAGAACGATCCGACGGACTCCGATTTGATAGAAAGAACACCCAAATCATCGTCCATGTCTTCCCAGTTTCTCTACCTCCTTCTGTTTCTTACTTCTCTTTGTCTCTCTTCATCAGGTATGTTAAAAAGAAATAGCTATTGAATTTTTGTTTCAATGTCTTCTTATTGCTCGTTGGATATGAATGCCATTCAGTGTTGACGTCTTGTGTATAAATTACTTCAAATTTCGTACTCTGTATAGTTTATTGGCAGCTAAAGAGTACATTGTTTGCAGCAATTAGTTGCCGTTTTGATACTTTATATATACATTTCACCACCGAATGTTTTGTTGTACGTGTTTTGTTTGCTTGAACGCCGGGGTCTCTACTTCCCTTCAAGTTCTCATTCCATATACATAATATGTTTTTAACCAGTGGAGTTACTATTCCATTCCCATCAAGCTTATTCTATGGTTCATACCCTTCTGAAGCCTCTCATGTGGCATAAGGTTGGAAGAACATTTTTAGATGTTGCTGTTCCCATTGTATGGTTGATTACTGTTGCTACATCGTTTGGCTAAAATTTCAGTAATATCTCTCAAAAAGAAAAAAAGAAAAGAAAAGGAAAGAAAAGAAAAGAAAAGAAAATTTATGTAATGTCATTACATGCAATTACTTTTTATTTTATTTTTTAATCCAATTACATAATCTATTTACTAAACATCTCATACATGTGCAAGTTTGAGAAGGCTTTGGCTGTGATAGACCTAAATGAGAGATTAGAAGTGGTTTCTTTTTTGAAAGAACCGATCCCACTAGCCTTTTGCTCTAATGTTCACTACTAGTAGTCCTTTGGGATCAGTTAGGTGTGTGAAACTTAGTTGGACTGAGCACATGAATACTAGTTAATTATTTTTACCTCCTTCCCGTGGTTATGTTATTAGGCAGAGTTGGGGTTAAATTGAAAGAACATAGAGCACATGGATCGTGGATAATTATGGGTTTACGCAAAATTATCTTTTGTTCTATTATAATTGTTCTGCTTTTTGAACGGGCATTTTTATTTTGGCTACAAAGCATTCAGCATCTATCCTGACATGTTATGATTTTTGATAATGCATTCAATAGATGAACACTCAATGGAGTCGGTTCCCGATCTCCAAAATTCGATGTACCTAGCAGTTGATGCTTATCCGTGCATTCGGTTACTTAATCTTTCTGGAGAAATTGGCTGTTCAAGTAGGTTCTTTACACTAGATGTAAAAAATCAATTATTTTTCGAGTGCCAACATAATCCTCAGTGGAATATGGTGGCATCATCCATGTCTTTTTACTTTGTACCTCAGATCCTGGACGAGAAAAGGTTGTAGTTCCGATGATTAACTTCAAGGATGCTGATGAGATATTGCAACCATCTGCAGTTTTAGTTTCAATGGATGCAATCTCTAGTTTCTTTACTAGGTGGGTCTTACATTTTTTATATGTACTCCCTTGTTCATACATATTCTTGTTCCCTTATAAGGATTATTTTCCGAGCCTCGGGTCTAAAACACTTTCCAAACCTCCAAATGGAAAATTAAAGATAAGGGAAGATAACCATTTTTTAAAAATAAATATTAATAAAAAGAAGAAACAAGTTTTCTTTATTAATGAAGAATAGAGTACAAGAATGAAAAACAGGCTAAAAGGAGTAGACTGAGAAAATTAAAAAATAAAGCAAATAAAGGGTAGAACTACAAGAAAACACCTCAATTATAACAAATATATTGGGAAGAGTAACCCTCAAAAGTGTTTGAGAGGGAGGATCAAGAAGCTTTTATCTTGACAAACTCAAAAGGATCTGACTGTTAATAAAATTTGTCCTCAAAGATTCATTGATTTCGTTCCAGCCAAATGTCTAAAAGAATGGCTTTTAAAAAATTGATCTAAATAAGCTTAGATGCGATTAGAACAAGTAGAAAACAAAGAATTTGAAATATATTGTCAGAAACATCTTCACCAGAAACATATCTTAAGAAAATAGAGAAGGAAGAAAACAAGCAAATTTGAGAAAAAGCACTTACGGAAGAAGAAGATATGAACTTTATCTTCCAAAACTGCAAAACTCAAAGTGCAAAAAGAGGAAATAAAACCAGGAATATTCTTTTGGAATTGGAAGAAAGGGTTCGGAGTTGAATAATATCACGTTTCCTTTCCAAAAAATATCTATGAAAATCAAATTCTCCTTTGGATTTCTTGTACTAAAATATATCACTACTTGTGATGACATTCACATAAAAGATCCTCAATTTTGCTTTTCCTTGCATATTTTGTGAACCGTTTCTCCAATGGGATGATTATATATATATAAAATTTAAAAAATATATAAAAGCAGCAACTTTCATTGAATTTTTTTTTTAAAATACAAGGGCATACAAAAAAGCAAGTCCACCAAAAGGCTCCAACTAAGTGAATAAATGCTCTCCCTCCACTTTCTTCTTTGCTTATTATAATTGGACGAAAACTATCTACTCAGATAGAATTCATATATCTATTTCAGACTACAGGACGATTCTCATTTTGCAAATAATGTTGGTGGTGTTTTAATCGAACCAGGAACTGGAATACAAAATAGAACTGAAGGTAAAGTTCATTTACTTATTCAAATTCTTTTCCCTTCATTTTGTTTTCTTTCCTCTTCTCTCTCTCTCTGTTAATTGTGTGGTAACTGGTAATTCATGCATGCACATCAACTACTGACATGGTCATTTATTTTTCCTTGCAGGATTTTCTCCGGCCCAAAAGTTTCCACAAGCTAAATTTGCTCCGTATGAAAAAAGTGACTATGAATGGAACCCAAGTGTATGTTTGAATAATCATACAAAATTCTCAGATTTTTTTAGGAATGGTCAACTTTTAGAAGCTAAACTGCAAAACTCTTATATTGTTCTCATTTGTAAAACTTAG

mRNA sequence

ATGTCTTCCCAGTTTCTCTACCTCCTTCTGTTTCTTACTTCTCTTTGTCTCTCTTCATCAGATGAACACTCAATGGAGTCGGTTCCCGATCTCCAAAATTCGATGTACCTAGCAGTTGATGCTTATCCGTGCATTCGGTTACTTAATCTTTCTGGAGAAATTGGCTGTTCAAATCCTGGACGAGAAAAGGTTGTAGTTCCGATGATTAACTTCAAGGATGCTGATGAGATATTGCAACCATCTGCAGTTTTAGTTTCAATGGATGCAATCTCTAGTTTCTTTACTAGACTACAGGACGATTCTCATTTTGCAAATAATGTTGGTGGTGTTTTAATCGAACCAGGAACTGGAATACAAAATAGAACTGAAGGATTTTCTCCGGCCCAAAAGTTTCCACAAGCTAAATTTGCTCCGTATGAAAAAAGTGACTATGAATGGAACCCAAGTGTATGTTTGAATAATCATACAAAATTCTCAGATTTTTTTAGGAATGGTCAACTTTTAGAAGCTAAACTGCAAAACTCTTATATTGTTCTCATTTGTAAAACTTAG

Coding sequence (CDS)

ATGTCTTCCCAGTTTCTCTACCTCCTTCTGTTTCTTACTTCTCTTTGTCTCTCTTCATCAGATGAACACTCAATGGAGTCGGTTCCCGATCTCCAAAATTCGATGTACCTAGCAGTTGATGCTTATCCGTGCATTCGGTTACTTAATCTTTCTGGAGAAATTGGCTGTTCAAATCCTGGACGAGAAAAGGTTGTAGTTCCGATGATTAACTTCAAGGATGCTGATGAGATATTGCAACCATCTGCAGTTTTAGTTTCAATGGATGCAATCTCTAGTTTCTTTACTAGACTACAGGACGATTCTCATTTTGCAAATAATGTTGGTGGTGTTTTAATCGAACCAGGAACTGGAATACAAAATAGAACTGAAGGATTTTCTCCGGCCCAAAAGTTTCCACAAGCTAAATTTGCTCCGTATGAAAAAAGTGACTATGAATGGAACCCAAGTGTATGTTTGAATAATCATACAAAATTCTCAGATTTTTTTAGGAATGGTCAACTTTTAGAAGCTAAACTGCAAAACTCTTATATTGTTCTCATTTGTAAAACTTAG

Protein sequence

MSSQFLYLLLFLTSLCLSSSDEHSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNPGREKVVVPMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQNRTEGFSPAQKFPQAKFAPYEKSDYEWNPSVCLNNHTKFSDFFRNGQLLEAKLQNSYIVLICKT*
Homology
[Close]
BLAST of Csa3G187300 vs. Swiss-Prot
Match: NICA_ARATH (Nicastrin OS=Arabidopsis thaliana GN=At3g52640/At3g52650 PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.7e-41
Identity = 80/148 (54.05%), Postives = 106/148 (71.62%), Query Frame = 1 

Query: 1   MSSQFLYLLLFLTSLCLSSSDE-HSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNP 60
           +S  F  +LL +  L LS +DE  S+ESVPDLQ  MY+AVD +PC+RLLNLSGEIGCSNP
Sbjct: 9   LSIAFTLVLLSILPLHLSLADEITSIESVPDLQKLMYVAVDGFPCVRLLNLSGEIGCSNP 68

Query: 61  GREKVVVPMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQ 120
           G  KVV P+I  KD  +++QP  +LV+ D +  FFTR+  D  FA+ +GGVL+E G+  Q
Sbjct: 69  GINKVVAPIIKLKDVKDLVQPHTILVTADEMEDFFTRVSTDLSFASKIGGVLVESGSNFQ 128

Query: 121 NRTEGFSPAQKFPQAKFAPYEKSDYEWN 148
            + +GFSP ++FPQA+F+PYE  +Y+WN
Sbjct: 129 QKLKGFSPDKRFPQAQFSPYENVEYKWN 156

[Close]
BLAST of Csa3G187300 vs. Swiss-Prot
Match: NICA_DICDI (Nicastrin OS=Dictyostelium discoideum GN=ncstn PE=3 SV=2)

HSP 1 Score: 57.8 bits (138), Expect = 1.5e-07
Identity = 41/152 (26.97%), Postives = 81/152 (53.29%), Query Frame = 1 

Query: 7   YLLLFLTSLCLSSSDEHSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNP-GREKVV 66
           ++++F+  + + S+D  S +S   +++ MY ++++YPC R++ L+G+IGCS+  G +  +
Sbjct: 7   FIIVFI--IIVLSTDVISSQS--SIEDKMYTSLNSYPCTRIMTLNGQIGCSSSHGGDSGI 66

Query: 67  VPMINFKDADEIL-------QPSAVLVSMDAISSFFTR-LQDDSHFANNVGGVLIEPGTG 126
           + +I   D+DE         Q   ++V  D  S++F + L  + +    + G L+    G
Sbjct: 67  LYLI---DSDESYHNYFSYNQQKDIIVVFD--SNYFNKTLVLEMYSKKKMNGALVLTDIG 126

Query: 127 IQNRTEGFSPAQKFPQAKFAPYEKSDYEWNPS 150
              +T  +SP  ++P  +F  Y  S+  WNP+
Sbjct: 127 ---KTYPYSPEDQYPIKQFGLYPDSNLNWNPN 146

[Close]
BLAST of Csa3G187300 vs. TrEMBL
Match: A0A0A0LBP2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G187300 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 5.2e-100
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 1 

Query: 1   MSSQFLYLLLFLTSLCLSSSDEHSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNPG 60
           MSSQFLYLLLFLTSLCLSSSDEHSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNPG
Sbjct: 1   MSSQFLYLLLFLTSLCLSSSDEHSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNPG 60

Query: 61  REKVVVPMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQN 120
           REKVVVPMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQN
Sbjct: 61  REKVVVPMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQN 120

Query: 121 RTEGFSPAQKFPQAKFAPYEKSDYEWNPSVCLNNHTKFSDFFRNGQLLEAKLQNSYIVLI 180
           RTEGFSPAQKFPQAKFAPYEKSDYEWNPSVCLNNHTKFSDFFRNGQLLEAKLQNSYIVLI
Sbjct: 121 RTEGFSPAQKFPQAKFAPYEKSDYEWNPSVCLNNHTKFSDFFRNGQLLEAKLQNSYIVLI 180

Query: 181 CKT 184
           CKT
Sbjct: 181 CKT 183

[Close]
BLAST of Csa3G187300 vs. TrEMBL
Match: A0A061FP76_THECC (Zn-dependent exopeptidases superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_043862 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.3e-47
Identity = 93/142 (65.49%), Postives = 114/142 (80.28%), Query Frame = 1 

Query: 8   LLLFLTSLCLSSSDE-HSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNPGREKVVV 67
           LLLF     LS SD+ +SMESVPDLQ SMY+ VD YPC+RL+NLSGEIGCSNPGR+KVV 
Sbjct: 9   LLLFSFQSRLSLSDQTNSMESVPDLQKSMYMVVDGYPCVRLVNLSGEIGCSNPGRDKVVA 68

Query: 68  PMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQNRTEGFS 127
           P++ +KD  E+ QPSA+L+SMD +  FF+R+ +DS FA NVGGVL+E G  IQN+ +GFS
Sbjct: 69  PIVKYKDTKELGQPSAILLSMDDVQGFFSRVSNDSSFARNVGGVLVESGIEIQNKLKGFS 128

Query: 128 PAQKFPQAKFAPYEKSDYEWNP 149
           PAQKFPQA+FAPY  + YEWNP
Sbjct: 129 PAQKFPQAEFAPYHNTSYEWNP 150

[Close]
BLAST of Csa3G187300 vs. TrEMBL
Match: A0A061FPX7_THECC (Zn-dependent exopeptidases superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_043862 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.3e-47
Identity = 93/142 (65.49%), Postives = 114/142 (80.28%), Query Frame = 1 

Query: 8   LLLFLTSLCLSSSDE-HSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNPGREKVVV 67
           LLLF     LS SD+ +SMESVPDLQ SMY+ VD YPC+RL+NLSGEIGCSNPGR+KVV 
Sbjct: 9   LLLFSFQSRLSLSDQTNSMESVPDLQKSMYMVVDGYPCVRLVNLSGEIGCSNPGRDKVVA 68

Query: 68  PMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQNRTEGFS 127
           P++ +KD  E+ QPSA+L+SMD +  FF+R+ +DS FA NVGGVL+E G  IQN+ +GFS
Sbjct: 69  PIVKYKDTKELGQPSAILLSMDDVQGFFSRVSNDSSFARNVGGVLVESGIEIQNKLKGFS 128

Query: 128 PAQKFPQAKFAPYEKSDYEWNP 149
           PAQKFPQA+FAPY  + YEWNP
Sbjct: 129 PAQKFPQAEFAPYHNTSYEWNP 150

[Close]
BLAST of Csa3G187300 vs. TrEMBL
Match: D7TSK0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g00380 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.6e-45
Identity = 92/153 (60.13%), Postives = 115/153 (75.16%), Query Frame = 1 

Query: 1   MSSQFLYLLL--FLTSL---CLSSSDEHSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIG 60
           M S  +YLLL  F+  L    L+     S+ESVPDL+ SMY+ VD YPC+RLLNLSGEIG
Sbjct: 1   MESNLIYLLLLFFVAQLHPPLLAEEAMRSLESVPDLEKSMYMVVDGYPCVRLLNLSGEIG 60

Query: 61  CSNPGREKVVVPMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPG 120
           CSNPGREKVV P++ FK+ + + Q SA+LVS+D I SFFTRL  DS+FA NVGGVL+E  
Sbjct: 61  CSNPGREKVVAPIVRFKNVNVLAQSSAILVSLDEIQSFFTRLSHDSNFARNVGGVLVESV 120

Query: 121 TGIQNRTEGFSPAQKFPQAKFAPYEKSDYEWNP 149
           +  QN+ +GFSP +KFPQA+FAPY+  +YEWNP
Sbjct: 121 SASQNKLKGFSPVEKFPQAEFAPYQSINYEWNP 153

[Close]
BLAST of Csa3G187300 vs. TrEMBL
Match: W9SA84_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004947 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 5.2e-44
Identity = 91/150 (60.67%), Postives = 112/150 (74.67%), Query Frame = 1 

Query: 1   MSSQFLYL-LLFLTSLCLSSSDEHS-MESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSN 60
           M+  FLY  LLF   L  S + + + MESVPDLQNSMY  VD YPC+RL+N SGEIGCSN
Sbjct: 1   MAFNFLYFALLFTFHLQFSLAGQTNLMESVPDLQNSMYKVVDGYPCVRLVNSSGEIGCSN 60

Query: 61  PGREKVVVPMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGI 120
           PGREKVV P+I FKDA+ + + S +L+S D + SFF R+ DDS FA NVGGVL+E G   
Sbjct: 61  PGREKVVAPIIRFKDANTLSRSSTILLSFDEVESFFARIADDSTFARNVGGVLVESGAEF 120

Query: 121 QNRTEGFSPAQKFPQAKFAPYEKSDYEWNP 149
           Q++  GFSPA KFPQA+FAPY+ ++YEWNP
Sbjct: 121 QDKLRGFSPAHKFPQAEFAPYKSTNYEWNP 150

[Close]
BLAST of Csa3G187300 vs. TAIR10
Match: AT3G52640.2 (AT3G52640.2 Zn-dependent exopeptidases superfamily protein)

HSP 1 Score: 169.9 bits (429), Expect = 1.5e-42
Identity = 80/148 (54.05%), Postives = 106/148 (71.62%), Query Frame = 1 

Query: 1   MSSQFLYLLLFLTSLCLSSSDE-HSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNP 60
           +S  F  +LL +  L LS +DE  S+ESVPDLQ  MY+AVD +PC+RLLNLSGEIGCSNP
Sbjct: 9   LSIAFTLVLLSILPLHLSLADEITSIESVPDLQKLMYVAVDGFPCVRLLNLSGEIGCSNP 68

Query: 61  GREKVVVPMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQ 120
           G  KVV P+I  KD  +++QP  +LV+ D +  FFTR+  D  FA+ +GGVL+E G+  Q
Sbjct: 69  GINKVVAPIIKLKDVKDLVQPHTILVTADEMEDFFTRVSTDLSFASKIGGVLVESGSNFQ 128

Query: 121 NRTEGFSPAQKFPQAKFAPYEKSDYEWN 148
            + +GFSP ++FPQA+F+PYE  +Y+WN
Sbjct: 129 QKLKGFSPDKRFPQAQFSPYENVEYKWN 156

[Close]
BLAST of Csa3G187300 vs. NCBI nr
Match: gi|700202323|gb|KGN57456.1| (hypothetical protein Csa_3G187300 [Cucumis sativus])

HSP 1 Score: 371.7 bits (953), Expect = 7.4e-100
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 1 

Query: 1   MSSQFLYLLLFLTSLCLSSSDEHSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNPG 60
           MSSQFLYLLLFLTSLCLSSSDEHSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNPG
Sbjct: 1   MSSQFLYLLLFLTSLCLSSSDEHSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNPG 60

Query: 61  REKVVVPMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQN 120
           REKVVVPMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQN
Sbjct: 61  REKVVVPMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQN 120

Query: 121 RTEGFSPAQKFPQAKFAPYEKSDYEWNPSVCLNNHTKFSDFFRNGQLLEAKLQNSYIVLI 180
           RTEGFSPAQKFPQAKFAPYEKSDYEWNPSVCLNNHTKFSDFFRNGQLLEAKLQNSYIVLI
Sbjct: 121 RTEGFSPAQKFPQAKFAPYEKSDYEWNPSVCLNNHTKFSDFFRNGQLLEAKLQNSYIVLI 180

Query: 181 CKT 184
           CKT
Sbjct: 181 CKT 183

[Close]
BLAST of Csa3G187300 vs. NCBI nr
Match: gi|449445945|ref|XP_004140732.1| (PREDICTED: nicastrin [Cucumis sativus])

HSP 1 Score: 302.4 bits (773), Expect = 5.5e-79
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1 

Query: 1   MSSQFLYLLLFLTSLCLSSSDEHSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNPG 60
           MSSQFLYLLLFLTSLCLSSSDEHSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNPG
Sbjct: 1   MSSQFLYLLLFLTSLCLSSSDEHSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNPG 60

Query: 61  REKVVVPMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQN 120
           REKVVVPMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQN
Sbjct: 61  REKVVVPMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQN 120

Query: 121 RTEGFSPAQKFPQAKFAPYEKSDYEWNPS 150
           RTEGFSPAQKFPQAKFAPYEKSDYEWNPS
Sbjct: 121 RTEGFSPAQKFPQAKFAPYEKSDYEWNPS 149

[Close]
BLAST of Csa3G187300 vs. NCBI nr
Match: gi|659114563|ref|XP_008457115.1| (PREDICTED: nicastrin isoform X1 [Cucumis melo])

HSP 1 Score: 285.0 bits (728), Expect = 9.1e-74
Identity = 140/148 (94.59%), Postives = 144/148 (97.30%), Query Frame = 1 

Query: 1   MSSQFLYLLLFLTSLCLSSSDEHSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNPG 60
           MSSQFLYLLLFLTSL LSSSDE  MESVPDLQNSMYLAVD YPCIRLLNLSGEIGCSNPG
Sbjct: 19  MSSQFLYLLLFLTSLRLSSSDEQKMESVPDLQNSMYLAVDGYPCIRLLNLSGEIGCSNPG 78

Query: 61  REKVVVPMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQN 120
           REKVV+PMINFKDADEIL+PSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQN
Sbjct: 79  REKVVLPMINFKDADEILEPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQN 138

Query: 121 RTEGFSPAQKFPQAKFAPYEKSDYEWNP 149
           RTEGFSPAQKFPQAKFAPY+K+DYEWNP
Sbjct: 139 RTEGFSPAQKFPQAKFAPYKKNDYEWNP 166

[Close]
BLAST of Csa3G187300 vs. NCBI nr
Match: gi|659114565|ref|XP_008457117.1| (PREDICTED: nicastrin isoform X2 [Cucumis melo])

HSP 1 Score: 285.0 bits (728), Expect = 9.1e-74
Identity = 140/148 (94.59%), Postives = 144/148 (97.30%), Query Frame = 1 

Query: 1   MSSQFLYLLLFLTSLCLSSSDEHSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNPG 60
           MSSQFLYLLLFLTSL LSSSDE  MESVPDLQNSMYLAVD YPCIRLLNLSGEIGCSNPG
Sbjct: 19  MSSQFLYLLLFLTSLRLSSSDEQKMESVPDLQNSMYLAVDGYPCIRLLNLSGEIGCSNPG 78

Query: 61  REKVVVPMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQN 120
           REKVV+PMINFKDADEIL+PSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQN
Sbjct: 79  REKVVLPMINFKDADEILEPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQN 138

Query: 121 RTEGFSPAQKFPQAKFAPYEKSDYEWNP 149
           RTEGFSPAQKFPQAKFAPY+K+DYEWNP
Sbjct: 139 RTEGFSPAQKFPQAKFAPYKKNDYEWNP 166

[Close]
BLAST of Csa3G187300 vs. NCBI nr
Match: gi|590566687|ref|XP_007010306.1| (Zn-dependent exopeptidases superfamily protein isoform 2 [Theobroma cacao])

HSP 1 Score: 196.8 bits (499), Expect = 3.3e-47
Identity = 93/142 (65.49%), Postives = 114/142 (80.28%), Query Frame = 1 

Query: 8   LLLFLTSLCLSSSDE-HSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNPGREKVVV 67
           LLLF     LS SD+ +SMESVPDLQ SMY+ VD YPC+RL+NLSGEIGCSNPGR+KVV 
Sbjct: 9   LLLFSFQSRLSLSDQTNSMESVPDLQKSMYMVVDGYPCVRLVNLSGEIGCSNPGRDKVVA 68

Query: 68  PMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQNRTEGFS 127
           P++ +KD  E+ QPSA+L+SMD +  FF+R+ +DS FA NVGGVL+E G  IQN+ +GFS
Sbjct: 69  PIVKYKDTKELGQPSAILLSMDDVQGFFSRVSNDSSFARNVGGVLVESGIEIQNKLKGFS 128

Query: 128 PAQKFPQAKFAPYEKSDYEWNP 149
           PAQKFPQA+FAPY  + YEWNP
Sbjct: 129 PAQKFPQAEFAPYHNTSYEWNP 150

The following BLAST results are available for this feature:
BLAST of Csa3G187300 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NICA_ARATH2.7e-4154.05Nicastrin OS=Arabidopsis thaliana GN=At3g52640/At3g52650 PE=2 SV=1[more]
NICA_DICDI1.5e-0726.97Nicastrin OS=Dictyostelium discoideum GN=ncstn PE=3 SV=2[more]
BLAST of Csa3G187300 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBP2_CUCSA5.2e-100100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G187300 PE=4 SV=1[more]
A0A061FP76_THECC2.3e-4765.49Zn-dependent exopeptidases superfamily protein isoform 1 OS=Theobroma cacao GN=T... [more]
A0A061FPX7_THECC2.3e-4765.49Zn-dependent exopeptidases superfamily protein isoform 2 OS=Theobroma cacao GN=T... [more]
D7TSK0_VITVI3.6e-4560.13Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g00380 PE=4 SV=... [more]
W9SA84_9ROSA5.2e-4460.67Uncharacterized protein OS=Morus notabilis GN=L484_004947 PE=4 SV=1[more]
BLAST of Csa3G187300 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G52640.21.5e-4254.05 Zn-dependent exopeptidases superfamily protein[more]
BLAST of Csa3G187300 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202323|gb|KGN57456.1|7.4e-100100.00hypothetical protein Csa_3G187300 [Cucumis sativus][more]
gi|449445945|ref|XP_004140732.1|5.5e-79100.00PREDICTED: nicastrin [Cucumis sativus][more]
gi|659114563|ref|XP_008457115.1|9.1e-7494.59PREDICTED: nicastrin isoform X1 [Cucumis melo][more]
gi|659114565|ref|XP_008457117.1|9.1e-7494.59PREDICTED: nicastrin isoform X2 [Cucumis melo][more]
gi|590566687|ref|XP_007010306.1|3.3e-4765.49Zn-dependent exopeptidases superfamily protein isoform 2 [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008710Nicastrin
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0016485protein processing
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016485 protein processing
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005798 Golgi-associated vesicle
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005774 vacuolar membrane
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU094906cucumber EST collection version 3.0transcribed_cluster
CU112104cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G187300.1Csa3G187300.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU112104CU112104transcribed_cluster
CU094906CU094906transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008710NicastrinPANTHERPTHR21092NICASTRINcoord: 1..148
score: 8.6
NoneNo IPR availablePANTHERPTHR21092:SF0NICASTRINcoord: 1..148
score: 8.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G187300CSPI03G17720Wild cucumber (PI 183967)cpicuB120
Csa3G187300Cucsa.108560Cucumber (Gy14) v1cgycuB132
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G187300Silver-seed gourdcarcuB0196
Csa3G187300Silver-seed gourdcarcuB0781
Csa3G187300Watermelon (97103) v2cuwmbB215
Csa3G187300Wax gourdcuwgoB283
Csa3G187300Cucurbita maxima (Rimu)cmacuB245
Csa3G187300Cucurbita maxima (Rimu)cmacuB458
Csa3G187300Cucurbita moschata (Rifu)cmocuB232
Csa3G187300Cucurbita moschata (Rifu)cmocuB445
Csa3G187300Melon (DHL92) v3.5.1cumeB251
Csa3G187300Watermelon (Charleston Gray)cuwcgB230
Csa3G187300Watermelon (97103) v1cuwmB243
Csa3G187300Cucurbita pepo (Zucchini)cpecuB550
Csa3G187300Cucurbita pepo (Zucchini)cpecuB603
Csa3G187300Bottle gourd (USVL1VR-Ls)culsiB211
Csa3G187300Cucumber (Gy14) v2cgybcuB109
Csa3G187300Melon (DHL92) v3.6.1cumedB238