CSPI03G17720 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G17720
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Nicastrin
Location	Chr3 : 13299499 .. 13302681 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTATATTTAAGAAAATTAATCTAAAAACTACCCATCAAAAGCAACCCTGAAAAGAACGATGAAAGAAAGAAAAAAAAGCCCCGCCAAGTTCCCCAATTTTTCCCCTTGTCCGAAGGTCAATTTTCAGTTTAATTTCCCAACCCGATCTGGGTTCTCTAGTCCATTTCACCTTCACTAACGAGGAGCTGAGGTCCCCAAGAACGATCCGACGGACTCCGATTTGATAGAAAGAACACCCAAATCATCGTCCATGTCTTCCCAGTTTCTCTACCTCCTTCTGTTTCTTACTTCTCTTTGTCTCTCTTCATCAGGTATGTTAAAAAGAAATAGCTATTGAATTTTTGTTTCAATGTCTTCTTATTGCTCGTTGGATATGAATGCCATTCAGTGTTGACGTCTTGTGTATAAATTACTTCAAATTTCGTACTCTGTATAGTTTATTGGCAGCTAAAGAGTACATTGTTTGCAGCAATTAGTTGCCGTTTTGATACTTTATATATACATTTCACCACCGAATGTTTTGTTGTACGTGTTTTGTTTGCTTGAACGCCGGGGTCTCTACTTCCCTTCAAGTTCTCATTCCATATACATAATATGTTTTTAACCAGTGGAGTTACTATTCCATTCCCATCAAGCTTATTCTATGGTTCATACCCTTCTGAAGCCTCTCATGTGGCATAAGGTTGGAAGAACATTTTTAGATGTTGCTGTTCCCATTGTATGGTTGATTACTGTTGCTACATCGTTTGGCTAAAATTTCAGTAATATCTCTCAAAAAGAAAAAAAGAAAAGAAAAGGAAAGAAAAGAAAAGAAAAGAAAATTTATGTAATGTCATTACATGCAATTACTTTTTATTTTATTTTTTAATCCAATTACATAATCTATTTACTAAACATCTCATACATGTGCAAGTTTGAGAAGGCTTTGGCTGTGATAGACCTAAATGAGAGATTAGAAGTGGTTTCTTTTTTGAAAGAACCGATCCCACTAGCCTTTTGCTCTAATGTTCACTACTAGTAGTCCTTTGGGATCAGTTAGGTGTGTGAAACTTAGTTGGACTGAGCACATGAATACTAGTTAATTATTTTTACCTCCTTCCCGTGGTTATGTTATTAGGCAGAGTTGGGGTTAAATTGAAAGAACATAGAGCACATGGATCGTGGATAATTATGGGTTTACGCAAAATTATCTTTTGTTCTATTATAATTGTTCTGCTTTTTGAACGGGCATTTTTATTTTGGCTACAAAGCATTCAGCATCTATCCTGACATGTTATGATTTTTGATAATGCATTCAATAGATGAACACTCAATGGAGTCGGTTCCCGATCTCCAAAATTCGATGTACCTAGCAGTTGATGCTTATCCGTGCATTCGGTTACTTAATCTTTCTGGAGAAATTGGCTGTTCAAGTAGGTTCTTTACACTAGATGTAAAAAATCAATTATTTTTCGAGTGCCAACATAATCCTCAGTGGAATATGGTGGCATCATCCATGTCTTTTTACTTTGTACCTCAGATCCTGGACGAGAAAAGGTTGTAGTTCCGATGATTAACTTCAAGGATGCTGATGAGATATTGCAACCATCTGCAGTTTTAGTTTCAATGGATGCAATCTCTAGTTTCTTTACTAGGTGGGTCTTACATTTTTTATATGTACTCCCTTGTTCATACATATTCTTGTTCCCTTATAAGGATTATTTTCCGAGCCTCGGGTCTAAAACACTTTCCAAACCTCCAAATGGAAAATTAAAGATAAGGGAAGATAACCATTTTTTAAAAATAAATATTAATAAAAAGAAGAAACAAGTTTTCTTTATTAATGAAGAATAGAGTACAAGAATGAAAAACAGGCTAAAAGGAGTAGACTGAGAAAATTAAAAAATAAAGCAAATAAAGGGTAGAACTACAAGAAAACACCTCAATTATAACAAATATATTGGGAAGAGTAACCCTCAAAAGTGTTTGAGAGGGAGGATCAAGAAGCTTTTATCTTGACAAACTCAAAAGGATCTGACTGTTAATAAAATTTGTCCTCAAAGATTCATTGATTTCGTTCCAGCCAAATGTCTAAAAGAATGGCTTTTAAAAAATTGATCTAAATAAGCTTAGATGCGATTAGAACAAGTAGAAAACAAAGAATTTGAAATATATTGTCAGAAACATCTTCACCAGAAACATATCTTAAGAAAATAGAGAAGGAAGAAAACAAGCAAATTTGAGAAAAAGCACTTACGGAAGAAGAAGATATGAACTTTATCTTCCAAAACTGCAAAACTCAAAGTGCAAAAAGAGGAAATAAAACCAGGAATATTCTTTTGGAATTGGAAGAAAGGGTTCGGAGTTGAATAATATCACGTTTCCTTTCCAAAAAATATCTATGAAAATCAAATTCTCCTTTGGATTTCTTGTACTAAAATATATCACTACTTGTGATGACATTCACATAAAAGATCCTCAATTTTGCTTTTCCTTGCATATTTTGTGAACCGTTTCTCCAATGGGATGATTATATATATATAAAATTTAAAAAATATATAAAAGCAGCAACTTTCATTGAATTTTTTTTTTAAAATACAAGGGCATACAAAAAAGCAAGTCCACCAAAAGGCTCCAACTAAGTGAATAAATGCTCTCCCTCCACTTTCTTCTTTGCTTATTATAATTGGACGAAAACTATCTACTCAGATAGAATTCATATATCTATTTCAGACTACAGGACGATTCTCATTTTGCAAATAATGTTGGTGGTGTTTTAATCGAACCAGGAACTGGAATACAAAATAGAACTGAAGGTAAAGTTCATTTACTTATTCAAATTCTTTTCCCTTCATTTTGTTTTCTTTCCTCTTCTCTCTCTCTCTGTTAATTGTGTGGTAACTGGTAATTCATGCATGCACATCAACTACTGACATGGTCATTTATTTTTCCTTGCAGGATTTTCTCCGGCCCAAAAGTTTCCACAAGCTAAATTTGCTCCGTATGAAAAAAGTGACTATGAATGGAACCCAAGTGTATGTTTGAATAATCATACAAAATTCTCAGATTTTTTTAGGAATGGTCAACTTTTAGAAGCTAAACTGCAAAACTCTTATATTGTTCTCATTTGTAAAACTTAGCATCGAACTATGAATCGAAGTCATGAACATATGGCTGGTATGATATCAAACAATGATTCATAG

mRNA sequence

ATGTCTTCCCAGTTTCTCTACCTCCTTCTGTTTCTTACTTCTCTTTGTCTCTCTTCATCAGATGAACACTCAATGGAGTCGGTTCCCGATCTCCAAAATTCGATGTACCTAGCAGTTGATGCTTATCCGTGCATTCGGTTACTTAATCTTTCTGGAGAAATTGGCTGTTCAAATCCTGGACGAGAAAAGGTTGTAGTTCCGATGATTAACTTCAAGGATGCTGATGAGATATTGCAACCATCTGCAGTTTTAGTTTCAATGGATGCAATCTCTAGTTTCTTTACTAGACTACAGGACGATTCTCATTTTGCAAATAATGTTGGTGGTGTTTTAATCGAACCAGGAACTGGAATACAAAATAGAACTGAAGGATTTTCTCCGGCCCAAAAGTTTCCACAAGCTAAATTTGCTCCGTATGAAAAAAGTGACTATGAATGGAACCCAAGTCATCGAACTATGAATCGAAGTCATGAACATATGGCTGGTATGATATCAAACAATGATTCATAG

Coding sequence (CDS)

ATGTCTTCCCAGTTTCTCTACCTCCTTCTGTTTCTTACTTCTCTTTGTCTCTCTTCATCAGATGAACACTCAATGGAGTCGGTTCCCGATCTCCAAAATTCGATGTACCTAGCAGTTGATGCTTATCCGTGCATTCGGTTACTTAATCTTTCTGGAGAAATTGGCTGTTCAAATCCTGGACGAGAAAAGGTTGTAGTTCCGATGATTAACTTCAAGGATGCTGATGAGATATTGCAACCATCTGCAGTTTTAGTTTCAATGGATGCAATCTCTAGTTTCTTTACTAGACTACAGGACGATTCTCATTTTGCAAATAATGTTGGTGGTGTTTTAATCGAACCAGGAACTGGAATACAAAATAGAACTGAAGGATTTTCTCCGGCCCAAAAGTTTCCACAAGCTAAATTTGCTCCGTATGAAAAAAGTGACTATGAATGGAACCCAAGTCATCGAACTATGAATCGAAGTCATGAACATATGGCTGGTATGATATCAAACAATGATTCATAG

Homology

[Close]

BLAST of CSPI03G17720 vs. Swiss-Prot
Match: NICA_ARATH (Nicastrin OS=Arabidopsis thaliana GN=At3g52640/At3g52650 PE=2 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 7.2e-41
Identity = 80/148 (54.05%), Postives = 108/148 (72.97%), Query Frame = 1


Query: 1   MSSQFLYLLLFLTSLCLSSSDE-HSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNP 60
           +S  F  +LL +  L LS +DE  S+ESVPDLQ  MY+AVD +PC+RLLNLSGEIGCSNP
Sbjct: 9   LSIAFTLVLLSILPLHLSLADEITSIESVPDLQKLMYVAVDGFPCVRLLNLSGEIGCSNP 68

Query: 61  GREKVVVPMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQ 120
           G  KVV P+I  KD  +++QP  +LV+ D +  FFTR+  D  FA+ +GGVL+E G+  Q
Sbjct: 69  GINKVVAPIIKLKDVKDLVQPHTILVTADEMEDFFTRVSTDLSFASKIGGVLVESGSNFQ 128

Query: 121 NRTEGFSPAQKFPQAKFAPYEKSDYEWN 148
            + +GFSP ++FPQA+F+PYE  +Y+WN
Sbjct: 129 QKLKGFSPDKRFPQAQFSPYENVEYKWN 156

[Close]

BLAST of CSPI03G17720 vs. Swiss-Prot
Match: NICA_DICDI (Nicastrin OS=Dictyostelium discoideum GN=ncstn PE=3 SV=2)

HSP 1 Score: 56.2 bits (134), Expect = 4.0e-07
Identity = 41/152 (26.97%), Postives = 83/152 (54.61%), Query Frame = 1


Query: 7   YLLLFLTSLCLSSSDEHSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNP-GREKVV 66
           ++++F+  + + S+D  S +S   +++ MY ++++YPC R++ L+G+IGCS+  G +  +
Sbjct: 7   FIIVFI--IIVLSTDVISSQS--SIEDKMYTSLNSYPCTRIMTLNGQIGCSSSHGGDSGI 66

Query: 67  VPMINFKDADEIL-------QPSAVLVSMDAISSFFTR-LQDDSHFANNVGGVLIEPGTG 126
           + +I   D+DE         Q   ++V  D  S++F + L  + +    + G L+    G
Sbjct: 67  LYLI---DSDESYHNYFSYNQQKDIIVVFD--SNYFNKTLVLEMYSKKKMNGALVLTDIG 126

Query: 127 IQNRTEGFSPAQKFPQAKFAPYEKSDYEWNPS 150
              +T  +SP  ++P  +F  Y  S+  WNP+
Sbjct: 127 ---KTYPYSPEDQYPIKQFGLYPDSNLNWNPN 146

[Close]

BLAST of CSPI03G17720 vs. TrEMBL
Match: A0A0A0LBP2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G187300 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.0e-78
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MSSQFLYLLLFLTSLCLSSSDEHSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNPG 60
           MSSQFLYLLLFLTSLCLSSSDEHSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNPG
Sbjct: 1   MSSQFLYLLLFLTSLCLSSSDEHSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNPG 60

Query: 61  REKVVVPMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQN 120
           REKVVVPMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQN
Sbjct: 61  REKVVVPMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQN 120

Query: 121 RTEGFSPAQKFPQAKFAPYEKSDYEWNPS 150
           RTEGFSPAQKFPQAKFAPYEKSDYEWNPS
Sbjct: 121 RTEGFSPAQKFPQAKFAPYEKSDYEWNPS 149

[Close]

BLAST of CSPI03G17720 vs. TrEMBL
Match: A0A061FPX7_THECC (Zn-dependent exopeptidases superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_043862 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.7e-47
Identity = 93/142 (65.49%), Postives = 114/142 (80.28%), Query Frame = 1


Query: 8   LLLFLTSLCLSSSDE-HSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNPGREKVVV 67
           LLLF     LS SD+ +SMESVPDLQ SMY+ VD YPC+RL+NLSGEIGCSNPGR+KVV 
Sbjct: 9   LLLFSFQSRLSLSDQTNSMESVPDLQKSMYMVVDGYPCVRLVNLSGEIGCSNPGRDKVVA 68

Query: 68  PMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQNRTEGFS 127
           P++ +KD  E+ QPSA+L+SMD +  FF+R+ +DS FA NVGGVL+E G  IQN+ +GFS
Sbjct: 69  PIVKYKDTKELGQPSAILLSMDDVQGFFSRVSNDSSFARNVGGVLVESGIEIQNKLKGFS 128

Query: 128 PAQKFPQAKFAPYEKSDYEWNP 149
           PAQKFPQA+FAPY  + YEWNP
Sbjct: 129 PAQKFPQAEFAPYHNTSYEWNP 150

[Close]

BLAST of CSPI03G17720 vs. TrEMBL
Match: A0A061FP76_THECC (Zn-dependent exopeptidases superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_043862 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.7e-47
Identity = 93/142 (65.49%), Postives = 114/142 (80.28%), Query Frame = 1


Query: 8   LLLFLTSLCLSSSDE-HSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNPGREKVVV 67
           LLLF     LS SD+ +SMESVPDLQ SMY+ VD YPC+RL+NLSGEIGCSNPGR+KVV 
Sbjct: 9   LLLFSFQSRLSLSDQTNSMESVPDLQKSMYMVVDGYPCVRLVNLSGEIGCSNPGRDKVVA 68

Query: 68  PMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQNRTEGFS 127
           P++ +KD  E+ QPSA+L+SMD +  FF+R+ +DS FA NVGGVL+E G  IQN+ +GFS
Sbjct: 69  PIVKYKDTKELGQPSAILLSMDDVQGFFSRVSNDSSFARNVGGVLVESGIEIQNKLKGFS 128

Query: 128 PAQKFPQAKFAPYEKSDYEWNP 149
           PAQKFPQA+FAPY  + YEWNP
Sbjct: 129 PAQKFPQAEFAPYHNTSYEWNP 150

[Close]

BLAST of CSPI03G17720 vs. TrEMBL
Match: D7TSK0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g00380 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 9.8e-45
Identity = 92/153 (60.13%), Postives = 115/153 (75.16%), Query Frame = 1


Query: 1   MSSQFLYLLL--FLTSL---CLSSSDEHSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIG 60
           M S  +YLLL  F+  L    L+     S+ESVPDL+ SMY+ VD YPC+RLLNLSGEIG
Sbjct: 1   MESNLIYLLLLFFVAQLHPPLLAEEAMRSLESVPDLEKSMYMVVDGYPCVRLLNLSGEIG 60

Query: 61  CSNPGREKVVVPMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPG 120
           CSNPGREKVV P++ FK+ + + Q SA+LVS+D I SFFTRL  DS+FA NVGGVL+E  
Sbjct: 61  CSNPGREKVVAPIVRFKNVNVLAQSSAILVSLDEIQSFFTRLSHDSNFARNVGGVLVESV 120

Query: 121 TGIQNRTEGFSPAQKFPQAKFAPYEKSDYEWNP 149
           +  QN+ +GFSP +KFPQA+FAPY+  +YEWNP
Sbjct: 121 SASQNKLKGFSPVEKFPQAEFAPYQSINYEWNP 153

[Close]

BLAST of CSPI03G17720 vs. TrEMBL
Match: W9SA84_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004947 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.4e-43
Identity = 91/150 (60.67%), Postives = 112/150 (74.67%), Query Frame = 1


Query: 1   MSSQFLYL-LLFLTSLCLSSSDEHS-MESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSN 60
           M+  FLY  LLF   L  S + + + MESVPDLQNSMY  VD YPC+RL+N SGEIGCSN
Sbjct: 1   MAFNFLYFALLFTFHLQFSLAGQTNLMESVPDLQNSMYKVVDGYPCVRLVNSSGEIGCSN 60

Query: 61  PGREKVVVPMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGI 120
           PGREKVV P+I FKDA+ + + S +L+S D + SFF R+ DDS FA NVGGVL+E G   
Sbjct: 61  PGREKVVAPIIRFKDANTLSRSSTILLSFDEVESFFARIADDSTFARNVGGVLVESGAEF 120

Query: 121 QNRTEGFSPAQKFPQAKFAPYEKSDYEWNP 149
           Q++  GFSPA KFPQA+FAPY+ ++YEWNP
Sbjct: 121 QDKLRGFSPAHKFPQAEFAPYKSTNYEWNP 150

[Close]

BLAST of CSPI03G17720 vs. TAIR10
Match: AT3G52640.2 (AT3G52640.2 Zn-dependent exopeptidases superfamily protein)

HSP 1 Score: 168.3 bits (425), Expect = 4.0e-42
Identity = 80/148 (54.05%), Postives = 108/148 (72.97%), Query Frame = 1


Query: 1   MSSQFLYLLLFLTSLCLSSSDE-HSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNP 60
           +S  F  +LL +  L LS +DE  S+ESVPDLQ  MY+AVD +PC+RLLNLSGEIGCSNP
Sbjct: 9   LSIAFTLVLLSILPLHLSLADEITSIESVPDLQKLMYVAVDGFPCVRLLNLSGEIGCSNP 68

Query: 61  GREKVVVPMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQ 120
           G  KVV P+I  KD  +++QP  +LV+ D +  FFTR+  D  FA+ +GGVL+E G+  Q
Sbjct: 69  GINKVVAPIIKLKDVKDLVQPHTILVTADEMEDFFTRVSTDLSFASKIGGVLVESGSNFQ 128

Query: 121 NRTEGFSPAQKFPQAKFAPYEKSDYEWN 148
            + +GFSP ++FPQA+F+PYE  +Y+WN
Sbjct: 129 QKLKGFSPDKRFPQAQFSPYENVEYKWN 156

[Close]

BLAST of CSPI03G17720 vs. NCBI nr
Match: gi|449445945|ref|XP_004140732.1| (PREDICTED: nicastrin [Cucumis sativus])

HSP 1 Score: 300.8 bits (769), Expect = 1.5e-78
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MSSQFLYLLLFLTSLCLSSSDEHSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNPG 60
           MSSQFLYLLLFLTSLCLSSSDEHSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNPG
Sbjct: 1   MSSQFLYLLLFLTSLCLSSSDEHSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNPG 60

Query: 61  REKVVVPMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQN 120
           REKVVVPMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQN
Sbjct: 61  REKVVVPMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQN 120

Query: 121 RTEGFSPAQKFPQAKFAPYEKSDYEWNPS 150
           RTEGFSPAQKFPQAKFAPYEKSDYEWNPS
Sbjct: 121 RTEGFSPAQKFPQAKFAPYEKSDYEWNPS 149

[Close]

BLAST of CSPI03G17720 vs. NCBI nr
Match: gi|700202323|gb|KGN57456.1| (hypothetical protein Csa_3G187300 [Cucumis sativus])

HSP 1 Score: 300.8 bits (769), Expect = 1.5e-78
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MSSQFLYLLLFLTSLCLSSSDEHSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNPG 60
           MSSQFLYLLLFLTSLCLSSSDEHSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNPG
Sbjct: 1   MSSQFLYLLLFLTSLCLSSSDEHSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNPG 60

Query: 61  REKVVVPMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQN 120
           REKVVVPMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQN
Sbjct: 61  REKVVVPMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQN 120

Query: 121 RTEGFSPAQKFPQAKFAPYEKSDYEWNPS 150
           RTEGFSPAQKFPQAKFAPYEKSDYEWNPS
Sbjct: 121 RTEGFSPAQKFPQAKFAPYEKSDYEWNPS 149

[Close]

BLAST of CSPI03G17720 vs. NCBI nr
Match: gi|659114565|ref|XP_008457117.1| (PREDICTED: nicastrin isoform X2 [Cucumis melo])

HSP 1 Score: 283.5 bits (724), Expect = 2.4e-73
Identity = 140/148 (94.59%), Postives = 144/148 (97.30%), Query Frame = 1


Query: 1   MSSQFLYLLLFLTSLCLSSSDEHSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNPG 60
           MSSQFLYLLLFLTSL LSSSDE  MESVPDLQNSMYLAVD YPCIRLLNLSGEIGCSNPG
Sbjct: 19  MSSQFLYLLLFLTSLRLSSSDEQKMESVPDLQNSMYLAVDGYPCIRLLNLSGEIGCSNPG 78

Query: 61  REKVVVPMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQN 120
           REKVV+PMINFKDADEIL+PSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQN
Sbjct: 79  REKVVLPMINFKDADEILEPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQN 138

Query: 121 RTEGFSPAQKFPQAKFAPYEKSDYEWNP 149
           RTEGFSPAQKFPQAKFAPY+K+DYEWNP
Sbjct: 139 RTEGFSPAQKFPQAKFAPYKKNDYEWNP 166

[Close]

BLAST of CSPI03G17720 vs. NCBI nr
Match: gi|659114563|ref|XP_008457115.1| (PREDICTED: nicastrin isoform X1 [Cucumis melo])

HSP 1 Score: 283.5 bits (724), Expect = 2.4e-73
Identity = 140/148 (94.59%), Postives = 144/148 (97.30%), Query Frame = 1


Query: 1   MSSQFLYLLLFLTSLCLSSSDEHSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNPG 60
           MSSQFLYLLLFLTSL LSSSDE  MESVPDLQNSMYLAVD YPCIRLLNLSGEIGCSNPG
Sbjct: 19  MSSQFLYLLLFLTSLRLSSSDEQKMESVPDLQNSMYLAVDGYPCIRLLNLSGEIGCSNPG 78

Query: 61  REKVVVPMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQN 120
           REKVV+PMINFKDADEIL+PSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQN
Sbjct: 79  REKVVLPMINFKDADEILEPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQN 138

Query: 121 RTEGFSPAQKFPQAKFAPYEKSDYEWNP 149
           RTEGFSPAQKFPQAKFAPY+K+DYEWNP
Sbjct: 139 RTEGFSPAQKFPQAKFAPYKKNDYEWNP 166

[Close]

BLAST of CSPI03G17720 vs. NCBI nr
Match: gi|590566687|ref|XP_007010306.1| (Zn-dependent exopeptidases superfamily protein isoform 2 [Theobroma cacao])

HSP 1 Score: 196.4 bits (498), Expect = 3.9e-47
Identity = 93/142 (65.49%), Postives = 114/142 (80.28%), Query Frame = 1


Query: 8   LLLFLTSLCLSSSDE-HSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNPGREKVVV 67
           LLLF     LS SD+ +SMESVPDLQ SMY+ VD YPC+RL+NLSGEIGCSNPGR+KVV 
Sbjct: 9   LLLFSFQSRLSLSDQTNSMESVPDLQKSMYMVVDGYPCVRLVNLSGEIGCSNPGRDKVVA 68

Query: 68  PMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQNRTEGFS 127
           P++ +KD  E+ QPSA+L+SMD +  FF+R+ +DS FA NVGGVL+E G  IQN+ +GFS
Sbjct: 69  PIVKYKDTKELGQPSAILLSMDDVQGFFSRVSNDSSFARNVGGVLVESGIEIQNKLKGFS 128

Query: 128 PAQKFPQAKFAPYEKSDYEWNP 149
           PAQKFPQA+FAPY  + YEWNP
Sbjct: 129 PAQKFPQAEFAPYHNTSYEWNP 150

The following BLAST results are available for this feature:

BLAST of CSPI03G17720 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NICA_ARATH	7.2e-41	54.05	Nicastrin OS=Arabidopsis thaliana GN=At3g52640/At3g52650 PE=2 SV=1	[more]
NICA_DICDI	4.0e-07	26.97	Nicastrin OS=Dictyostelium discoideum GN=ncstn PE=3 SV=2	[more]

BLAST of CSPI03G17720 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBP2_CUCSA	1.0e-78	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G187300 PE=4 SV=1	[more]
A0A061FPX7_THECC	2.7e-47	65.49	Zn-dependent exopeptidases superfamily protein isoform 2 OS=Theobroma cacao GN=T...	[more]
A0A061FP76_THECC	2.7e-47	65.49	Zn-dependent exopeptidases superfamily protein isoform 1 OS=Theobroma cacao GN=T...	[more]
D7TSK0_VITVI	9.8e-45	60.13	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g00380 PE=4 SV=...	[more]
W9SA84_9ROSA	1.4e-43	60.67	Uncharacterized protein OS=Morus notabilis GN=L484_004947 PE=4 SV=1	[more]

BLAST of CSPI03G17720 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G52640.2	4.0e-42	54.05	Zn-dependent exopeptidases superfamily protein	[more]

BLAST of CSPI03G17720 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445945\|ref\|XP_004140732.1\|	1.5e-78	100.00	PREDICTED: nicastrin [Cucumis sativus]	[more]
gi\|700202323\|gb\|KGN57456.1\|	1.5e-78	100.00	hypothetical protein Csa_3G187300 [Cucumis sativus]	[more]
gi\|659114565\|ref\|XP_008457117.1\|	2.4e-73	94.59	PREDICTED: nicastrin isoform X2 [Cucumis melo]	[more]
gi\|659114563\|ref\|XP_008457115.1\|	2.4e-73	94.59	PREDICTED: nicastrin isoform X1 [Cucumis melo]	[more]
gi\|590566687\|ref\|XP_007010306.1\|	3.9e-47	65.49	Zn-dependent exopeptidases superfamily protein isoform 2 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008710	Nicastrin

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0016485	protein processing

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016485	protein processing
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005798	Golgi-associated vesicle
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005774	vacuolar membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G17720.1	CSPI03G17720.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008710	Nicastrin	PANTHER	PTHR21092	NICASTRIN	coord: 1..148 score: 8.6
None	No IPR available	PANTHER	PTHR21092:SF0	NICASTRIN	coord: 1..148 score: 8.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI03G17720	Csa3G187300	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G17720	Cucsa.108560	Cucumber (Gy14) v1	cgycpiB133

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G17720	Melon (DHL92) v3.6.1	cpimedB239
CSPI03G17720	Cucumber (Gy14) v2	cgybcpiB110
CSPI03G17720	Silver-seed gourd	carcpiB0203
CSPI03G17720	Silver-seed gourd	carcpiB0799
CSPI03G17720	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G17720	Watermelon (97103) v2	cpiwmbB221
CSPI03G17720	Wax gourd	cpiwgoB283
CSPI03G17720	Cucurbita maxima (Rimu)	cmacpiB247
CSPI03G17720	Cucurbita maxima (Rimu)	cmacpiB461
CSPI03G17720	Cucurbita moschata (Rifu)	cmocpiB235
CSPI03G17720	Cucurbita moschata (Rifu)	cmocpiB449
CSPI03G17720	Melon (DHL92) v3.5.1	cpimeB241
CSPI03G17720	Watermelon (Charleston Gray)	cpiwcgB237
CSPI03G17720	Watermelon (97103) v1	cpiwmB242
CSPI03G17720	Cucurbita pepo (Zucchini)	cpecpiB551
CSPI03G17720	Cucurbita pepo (Zucchini)	cpecpiB605
CSPI03G17720	Bottle gourd (USVL1VR-Ls)	cpilsiB209