Csa3G187300.1 (mRNA) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAACGATGAAAGAAAGAAAAAAAAGCCCCGCCAAGTTCCCCAATTTTTCCCCTTGTCCGAAGGTCAATTTTCAGTTTAATTTCCCAACCCGATCTGGGTTCTCTAGTCCATTTCACCTTCACTAACGAGGAGCTGAGGTCCCCAAGAACGATCCGACGGACTCCGATTTGATAGAAAGAACACCCAAATCATCGTCCATGTCTTCCCAGTTTCTCTACCTCCTTCTGTTTCTTACTTCTCTTTGTCTCTCTTCATCAGGTATGTTAAAAAGAAATAGCTATTGAATTTTTGTTTCAATGTCTTCTTATTGCTCGTTGGATATGAATGCCATTCAGTGTTGACGTCTTGTGTATAAATTACTTCAAATTTCGTACTCTGTATAGTTTATTGGCAGCTAAAGAGTACATTGTTTGCAGCAATTAGTTGCCGTTTTGATACTTTATATATACATTTCACCACCGAATGTTTTGTTGTACGTGTTTTGTTTGCTTGAACGCCGGGGTCTCTACTTCCCTTCAAGTTCTCATTCCATATACATAATATGTTTTTAACCAGTGGAGTTACTATTCCATTCCCATCAAGCTTATTCTATGGTTCATACCCTTCTGAAGCCTCTCATGTGGCATAAGGTTGGAAGAACATTTTTAGATGTTGCTGTTCCCATTGTATGGTTGATTACTGTTGCTACATCGTTTGGCTAAAATTTCAGTAATATCTCTCAAAAAGAAAAAAAGAAAAGAAAAGGAAAGAAAAGAAAAGAAAAGAAAATTTATGTAATGTCATTACATGCAATTACTTTTTATTTTATTTTTTAATCCAATTACATAATCTATTTACTAAACATCTCATACATGTGCAAGTTTGAGAAGGCTTTGGCTGTGATAGACCTAAATGAGAGATTAGAAGTGGTTTCTTTTTTGAAAGAACCGATCCCACTAGCCTTTTGCTCTAATGTTCACTACTAGTAGTCCTTTGGGATCAGTTAGGTGTGTGAAACTTAGTTGGACTGAGCACATGAATACTAGTTAATTATTTTTACCTCCTTCCCGTGGTTATGTTATTAGGCAGAGTTGGGGTTAAATTGAAAGAACATAGAGCACATGGATCGTGGATAATTATGGGTTTACGCAAAATTATCTTTTGTTCTATTATAATTGTTCTGCTTTTTGAACGGGCATTTTTATTTTGGCTACAAAGCATTCAGCATCTATCCTGACATGTTATGATTTTTGATAATGCATTCAATAGATGAACACTCAATGGAGTCGGTTCCCGATCTCCAAAATTCGATGTACCTAGCAGTTGATGCTTATCCGTGCATTCGGTTACTTAATCTTTCTGGAGAAATTGGCTGTTCAAGTAGGTTCTTTACACTAGATGTAAAAAATCAATTATTTTTCGAGTGCCAACATAATCCTCAGTGGAATATGGTGGCATCATCCATGTCTTTTTACTTTGTACCTCAGATCCTGGACGAGAAAAGGTTGTAGTTCCGATGATTAACTTCAAGGATGCTGATGAGATATTGCAACCATCTGCAGTTTTAGTTTCAATGGATGCAATCTCTAGTTTCTTTACTAGGTGGGTCTTACATTTTTTATATGTACTCCCTTGTTCATACATATTCTTGTTCCCTTATAAGGATTATTTTCCGAGCCTCGGGTCTAAAACACTTTCCAAACCTCCAAATGGAAAATTAAAGATAAGGGAAGATAACCATTTTTTAAAAATAAATATTAATAAAAAGAAGAAACAAGTTTTCTTTATTAATGAAGAATAGAGTACAAGAATGAAAAACAGGCTAAAAGGAGTAGACTGAGAAAATTAAAAAATAAAGCAAATAAAGGGTAGAACTACAAGAAAACACCTCAATTATAACAAATATATTGGGAAGAGTAACCCTCAAAAGTGTTTGAGAGGGAGGATCAAGAAGCTTTTATCTTGACAAACTCAAAAGGATCTGACTGTTAATAAAATTTGTCCTCAAAGATTCATTGATTTCGTTCCAGCCAAATGTCTAAAAGAATGGCTTTTAAAAAATTGATCTAAATAAGCTTAGATGCGATTAGAACAAGTAGAAAACAAAGAATTTGAAATATATTGTCAGAAACATCTTCACCAGAAACATATCTTAAGAAAATAGAGAAGGAAGAAAACAAGCAAATTTGAGAAAAAGCACTTACGGAAGAAGAAGATATGAACTTTATCTTCCAAAACTGCAAAACTCAAAGTGCAAAAAGAGGAAATAAAACCAGGAATATTCTTTTGGAATTGGAAGAAAGGGTTCGGAGTTGAATAATATCACGTTTCCTTTCCAAAAAATATCTATGAAAATCAAATTCTCCTTTGGATTTCTTGTACTAAAATATATCACTACTTGTGATGACATTCACATAAAAGATCCTCAATTTTGCTTTTCCTTGCATATTTTGTGAACCGTTTCTCCAATGGGATGATTATATATATATAAAATTTAAAAAATATATAAAAGCAGCAACTTTCATTGAATTTTTTTTTTAAAATACAAGGGCATACAAAAAAGCAAGTCCACCAAAAGGCTCCAACTAAGTGAATAAATGCTCTCCCTCCACTTTCTTCTTTGCTTATTATAATTGGACGAAAACTATCTACTCAGATAGAATTCATATATCTATTTCAGACTACAGGACGATTCTCATTTTGCAAATAATGTTGGTGGTGTTTTAATCGAACCAGGAACTGGAATACAAAATAGAACTGAAGGTAAAGTTCATTTACTTATTCAAATTCTTTTCCCTTCATTTTGTTTTCTTTCCTCTTCTCTCTCTCTCTGTTAATTGTGTGGTAACTGGTAATTCATGCATGCACATCAACTACTGACATGGTCATTTATTTTTCCTTGCAGGATTTTCTCCGGCCCAAAAGTTTCCACAAGCTAAATTTGCTCCGTATGAAAAAAGTGACTATGAATGGAACCCAAGTGTATGTTTGAATAATCATACAAAATTCTCAGATTTTTTTAGGAATGGTCAACTTTTAGAAGCTAAACTGCAAAACTCTTATATTGTTCTCATTTGTAAAACTTAG ATGTCTTCCCAGTTTCTCTACCTCCTTCTGTTTCTTACTTCTCTTTGTCTCTCTTCATCAGATGAACACTCAATGGAGTCGGTTCCCGATCTCCAAAATTCGATGTACCTAGCAGTTGATGCTTATCCGTGCATTCGGTTACTTAATCTTTCTGGAGAAATTGGCTGTTCAAATCCTGGACGAGAAAAGGTTGTAGTTCCGATGATTAACTTCAAGGATGCTGATGAGATATTGCAACCATCTGCAGTTTTAGTTTCAATGGATGCAATCTCTAGTTTCTTTACTAGACTACAGGACGATTCTCATTTTGCAAATAATGTTGGTGGTGTTTTAATCGAACCAGGAACTGGAATACAAAATAGAACTGAAGGATTTTCTCCGGCCCAAAAGTTTCCACAAGCTAAATTTGCTCCGTATGAAAAAAGTGACTATGAATGGAACCCAAGTGTATGTTTGAATAATCATACAAAATTCTCAGATTTTTTTAGGAATGGTCAACTTTTAGAAGCTAAACTGCAAAACTCTTATATTGTTCTCATTTGTAAAACTTAG ATGTCTTCCCAGTTTCTCTACCTCCTTCTGTTTCTTACTTCTCTTTGTCTCTCTTCATCAGATGAACACTCAATGGAGTCGGTTCCCGATCTCCAAAATTCGATGTACCTAGCAGTTGATGCTTATCCGTGCATTCGGTTACTTAATCTTTCTGGAGAAATTGGCTGTTCAAATCCTGGACGAGAAAAGGTTGTAGTTCCGATGATTAACTTCAAGGATGCTGATGAGATATTGCAACCATCTGCAGTTTTAGTTTCAATGGATGCAATCTCTAGTTTCTTTACTAGACTACAGGACGATTCTCATTTTGCAAATAATGTTGGTGGTGTTTTAATCGAACCAGGAACTGGAATACAAAATAGAACTGAAGGATTTTCTCCGGCCCAAAAGTTTCCACAAGCTAAATTTGCTCCGTATGAAAAAAGTGACTATGAATGGAACCCAAGTGTATGTTTGAATAATCATACAAAATTCTCAGATTTTTTTAGGAATGGTCAACTTTTAGAAGCTAAACTGCAAAACTCTTATATTGTTCTCATTTGTAAAACTTAG MSSQFLYLLLFLTSLCLSSSDEHSMESVPDLQNSMYLAVDAYPCIRLLNLSGEIGCSNPGREKVVVPMINFKDADEILQPSAVLVSMDAISSFFTRLQDDSHFANNVGGVLIEPGTGIQNRTEGFSPAQKFPQAKFAPYEKSDYEWNPSVCLNNHTKFSDFFRNGQLLEAKLQNSYIVLICKT*
BLAST of Csa3G187300.1 vs. Swiss-Prot
Match: NICA_ARATH (Nicastrin OS=Arabidopsis thaliana GN=At3g52640/At3g52650 PE=2 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 2.7e-41 Identity = 80/148 (54.05%), Postives = 106/148 (71.62%), Query Frame = 1
BLAST of Csa3G187300.1 vs. Swiss-Prot
Match: NICA_DICDI (Nicastrin OS=Dictyostelium discoideum GN=ncstn PE=3 SV=2) HSP 1 Score: 57.8 bits (138), Expect = 1.5e-07 Identity = 41/152 (26.97%), Postives = 81/152 (53.29%), Query Frame = 1
BLAST of Csa3G187300.1 vs. TrEMBL
Match: A0A0A0LBP2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G187300 PE=4 SV=1) HSP 1 Score: 371.7 bits (953), Expect = 5.2e-100 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 1
BLAST of Csa3G187300.1 vs. TrEMBL
Match: A0A061FP76_THECC (Zn-dependent exopeptidases superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_043862 PE=4 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 2.3e-47 Identity = 93/142 (65.49%), Postives = 114/142 (80.28%), Query Frame = 1
BLAST of Csa3G187300.1 vs. TrEMBL
Match: A0A061FPX7_THECC (Zn-dependent exopeptidases superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_043862 PE=4 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 2.3e-47 Identity = 93/142 (65.49%), Postives = 114/142 (80.28%), Query Frame = 1
BLAST of Csa3G187300.1 vs. TrEMBL
Match: D7TSK0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g00380 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 3.6e-45 Identity = 92/153 (60.13%), Postives = 115/153 (75.16%), Query Frame = 1
BLAST of Csa3G187300.1 vs. TrEMBL
Match: W9SA84_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004947 PE=4 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 5.2e-44 Identity = 91/150 (60.67%), Postives = 112/150 (74.67%), Query Frame = 1
BLAST of Csa3G187300.1 vs. TAIR10
Match: AT3G52640.2 (AT3G52640.2 Zn-dependent exopeptidases superfamily protein) HSP 1 Score: 169.9 bits (429), Expect = 1.5e-42 Identity = 80/148 (54.05%), Postives = 106/148 (71.62%), Query Frame = 1
BLAST of Csa3G187300.1 vs. NCBI nr
Match: gi|700202323|gb|KGN57456.1| (hypothetical protein Csa_3G187300 [Cucumis sativus]) HSP 1 Score: 371.7 bits (953), Expect = 7.4e-100 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 1
BLAST of Csa3G187300.1 vs. NCBI nr
Match: gi|449445945|ref|XP_004140732.1| (PREDICTED: nicastrin [Cucumis sativus]) HSP 1 Score: 302.4 bits (773), Expect = 5.5e-79 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Csa3G187300.1 vs. NCBI nr
Match: gi|659114563|ref|XP_008457115.1| (PREDICTED: nicastrin isoform X1 [Cucumis melo]) HSP 1 Score: 285.0 bits (728), Expect = 9.1e-74 Identity = 140/148 (94.59%), Postives = 144/148 (97.30%), Query Frame = 1
BLAST of Csa3G187300.1 vs. NCBI nr
Match: gi|659114565|ref|XP_008457117.1| (PREDICTED: nicastrin isoform X2 [Cucumis melo]) HSP 1 Score: 285.0 bits (728), Expect = 9.1e-74 Identity = 140/148 (94.59%), Postives = 144/148 (97.30%), Query Frame = 1
BLAST of Csa3G187300.1 vs. NCBI nr
Match: gi|590566687|ref|XP_007010306.1| (Zn-dependent exopeptidases superfamily protein isoform 2 [Theobroma cacao]) HSP 1 Score: 196.8 bits (499), Expect = 3.3e-47 Identity = 93/142 (65.49%), Postives = 114/142 (80.28%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
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