Csa3G171760 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa3G171760
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Thioesterase family protein; contains IPR006683 (Thioesterase superfamily)
Location	Chr3 : 11457208 .. 11459344 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTTCTCTTAAGCCTTAACCATTAATTACCGTTTTAATTATTAGCCTTAAAATAGAATACAAGTCTTTCTCTTTCAATCTTTCTTCCACAAAATTCCTATTTCTTTTTACTTACTTTCATCACATCCCAAAATGTCGTCAACGGATAAATCTAATCCTCCGCTTGTTCTCGACGCTCCGCTTCAATCCCTTGGCTTCGAGGTCCACCACGTCTCTCCTCACAAAGTCTCCGGCCGTCTCCTCGTTTCTCCGATCTGCTGCCAGGTTCTATATATATATATATATATTCCAACTCCCTTAATTATTACCTCTAATTTCTTTCCTTCTTCTCTTCTTAATTCCTCGATTTCATTTTATTTTGTTTTTGGAAGCCGTTCAAAGTGCTGCACGGCGGCGTATCCGCGTTGATTGCGGAGTCTCTGGCGAGTATGGGTGCTCACAAGGCGTCTGGATACCAGAGAGTCGCAGGAATTCATCTCAGTATTAATCACTTGAAGAGCGCCTCCCTCGGCGAGCTTGTTATCGCCGAAGCCGTTCCGGTCACCGTCGGTAGAACCATCCAGGTAGTCTTTTTCTACCTAACTCCCATTATATTATCGTTTTATAATAATAATTGTTTAAATTAATTGAAATTTACAAAGCCAACCAACTGACTGTGACGTTTTACTTTGCAATTTTCTTTTTCTATATTCACTTCGAAAATTAGAAAATGAACACAAATATAAATTAATAGGGATGTTAGTTGCAAATTTAGCCATTAGATTCAAAATAGTTAAGTATATAGTAACATTTTAAAACGTTTATAAATATAGCAAATTTTGTAAAAGTCTATCAATAAATAGACCATATTGTAAATATTGTCTATGACTAATAAACGATAAACCTTACGAGTCTATCAGCGATAGATTTTACTATATTTACAATTTTTTTAAATGATGTTATATCATTAATTATTATTCGTAAAATGGTTATCAATTATAATTACTCTTAATATATAATACAAAGTTTAGATAATTTACATTCAAATTCCAATTTTAGCATATTTATTCTCCCACTGGTCTTAAACTATTATGGTCAAATCATAATAACATGTAGTCCAGGGTCATTCCTAAATTGGGTTTATAATGAAGTTTGATACTTAAAGTATATTATTTCCTTAACTATTTTAGCATTAAATGATTTTGAAATTTTAGCATTAAATGATTTTGAATTTTAGTTTGTTCTTTACCATTTTTTTTTAGTATAAGTGAGGTTTGAAGATTCGAACCACGACGTCTTAATTATTTTTGTTAAATTGGTAATTTCAATTAATTAGATCTTTGTATTTTAAAAATGTAATTCTTTTGAGGCATAATAAATTTGGGTGGTTAAACTGTATAATTTGGAGAAACTAAGCATAGGTAAGAAATTTAAAAGTCTCATACTTTCTAAACTATTGATTGGAAGCTCTAAACCTTGGATTTTAGACTTAAAAATGTGAAACGACGTAAGGTATACCCTGGAAATGTAGGTTAAGTGGTAATTTGTTGGGTTATTGAGAAGGATTTTGTGTGATGGTTAGGTATGGGATGTCCAATTATGGAAGGATTTGAAAGAAAGAAAAGTCGTTGTATCCACTGCAAGGGTAACTCTTCTTTCCAATATGCCTGTTCCTAAACATGTTGAAGATGCTGCTGATGCCCTCAAGAAATTTTCAAAACTGTAATCACTTTAAAGGTTTTTAATTTTAGTACGTAATTAATAAGTTTTATATATAAAGTTCAATGAATTATTTGATAGGGTGATTCAAGCATGGGCTGTGTGCATAAGATGACGATATAGTTAGGTGGACCTAAAATTAGATAGATATTAATGCCCACTTCCTTTTATGTTTTGTATACCACTAACCGAAATGTGTGCATAACCCACGTCTTCATTTGAAGACTGATCACAAACAGAAATGGGATGTTTGGACAAAGAAAGCAGAAAATGGGGAGGAAGAGAAAGAAAGAAAGAGATACCAAGCCAAGTGCATCACAATATTCCAAAGGAAACCCCACGAAGCCCATCTCCCTAATTGCCAAACGCAAACCATAAACGAAAGCATATATCTCTTCAGTTTCAGCCCCAACCCCATCTCCCATCTCCCATCTCCCAT

mRNA sequence

ATGTCGTCAACGGATAAATCTAATCCTCCGCTTGTTCTCGACGCTCCGCTTCAATCCCTTGGCTTCGAGGTCCACCACGTCTCTCCTCACAAAGTCTCCGGCCGTCTCCTCGTTTCTCCGATCTGCTGCCAGCCGTTCAAAGTGCTGCACGGCGGCGTATCCGCGTTGATTGCGGAGTCTCTGGCGAGTATGGGTGCTCACAAGGCGTCTGGATACCAGAGAGTCGCAGGAATTCATCTCAGTATTAATCACTTGAAGAGCGCCTCCCTCGGCGAGCTTGTTATCGCCGAAGCCGTTCCGGTCACCGTCGGTAGAACCATCCAGGTATGGGATGTCCAATTATGGAAGGATTTGAAAGAAAGAAAAGTCGTTGTATCCACTGCAAGGGTAACTCTTCTTTCCAATATGCCTGTTCCTAAACATGTTGAAGATGCTGCTGATGCCCTCAAGAAATTTTCAAAACTGTAA

Coding sequence (CDS)

ATGTCGTCAACGGATAAATCTAATCCTCCGCTTGTTCTCGACGCTCCGCTTCAATCCCTTGGCTTCGAGGTCCACCACGTCTCTCCTCACAAAGTCTCCGGCCGTCTCCTCGTTTCTCCGATCTGCTGCCAGCCGTTCAAAGTGCTGCACGGCGGCGTATCCGCGTTGATTGCGGAGTCTCTGGCGAGTATGGGTGCTCACAAGGCGTCTGGATACCAGAGAGTCGCAGGAATTCATCTCAGTATTAATCACTTGAAGAGCGCCTCCCTCGGCGAGCTTGTTATCGCCGAAGCCGTTCCGGTCACCGTCGGTAGAACCATCCAGGTATGGGATGTCCAATTATGGAAGGATTTGAAAGAAAGAAAAGTCGTTGTATCCACTGCAAGGGTAACTCTTCTTTCCAATATGCCTGTTCCTAAACATGTTGAAGATGCTGCTGATGCCCTCAAGAAATTTTCAAAACTGTAA

Protein sequence

MSSTDKSNPPLVLDAPLQSLGFEVHHVSPHKVSGRLLVSPICCQPFKVLHGGVSALIAESLASMGAHKASGYQRVAGIHLSINHLKSASLGELVIAEAVPVTVGRTIQVWDVQLWKDLKERKVVVSTARVTLLSNMPVPKHVEDAADALKKFSKL*

Homology

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BLAST of Csa3G171760 vs. Swiss-Prot
Match: DNAT1_ARATH (1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 OS=Arabidopsis thaliana GN=DHNAT1 PE=1 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 8.6e-49
Identity = 94/146 (64.38%), Postives = 117/146 (80.14%), Query Frame = 1


Query: 13  LDAPLQSLGFEVHHVSPHKVSGRLLVSPICCQPFKVLHGGVSALIAESLASMGAHKASGY 72
           +D PL  LGFE   +SP +++GRL VSP+CCQPFKVLHGGVSALIAESLASMGAH ASG+
Sbjct: 11  IDPPLHMLGFEFDELSPTRITGRLPVSPVCCQPFKVLHGGVSALIAESLASMGAHMASGF 70

Query: 73  QRVAGIHLSINHLKSASLGELVIAEAVPVTVGRTIQVWDVQLWKDL---KERKVVVSTAR 132
           +RVAGI LSINHLKSA LG+LV AEA PV+ G+TIQVW+V+LWK     K  K+++S++R
Sbjct: 71  KRVAGIQLSINHLKSADLGDLVFAEATPVSTGKTIQVWEVKLWKTTQKDKANKILISSSR 130

Query: 133 VTLLSNMPVPKHVEDAADALKKFSKL 156
           VTL+ N+P+P + +DAA+ LK  +KL
Sbjct: 131 VTLICNLPIPDNAKDAANMLKMVAKL 156

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BLAST of Csa3G171760 vs. Swiss-Prot
Match: DNAT2_ARATH (1,4-dihydroxy-2-naphthoyl-CoA thioesterase 2 OS=Arabidopsis thaliana GN=DHNAT2 PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 2.9e-44
Identity = 91/156 (58.33%), Postives = 117/156 (75.00%), Query Frame = 1


Query: 5   DKSNPPLVLDAPLQSLGFEVHHVSPHKVSGRLLVSPICCQPFKVLHGGVSALIAESLASM 64
           D  +P  ++D PL+ LGF    +S  +VSG L ++  CCQPFKVLHGGVSALIAE+LAS+
Sbjct: 2   DPKSPEFIIDQPLKILGFVFDELSATRVSGHLTLTEKCCQPFKVLHGGVSALIAEALASL 61

Query: 65  GAHKASGYQRVAGIHLSINHLKSASLGELVIAEAVPVTVGRTIQVWDVQLWKDLK----E 124
           GA  ASG++RVAGIHLSI+HL+ A+LGE+V AE+ PV+VG+ IQVW+V+LWK  K    +
Sbjct: 62  GAGIASGFKRVAGIHLSIHHLRPAALGEIVFAESFPVSVGKNIQVWEVRLWKAKKTETPD 121

Query: 125 RKVVVSTARVTLLSNMPVPKHVEDAADALKK-FSKL 156
            K++VST+RVTL   +P+P HV+DA D LKK  SKL
Sbjct: 122 NKIMVSTSRVTLFCGLPIPDHVKDAPDELKKVISKL 157

[Close]

BLAST of Csa3G171760 vs. Swiss-Prot
Match: Y1161_HAEIN (Putative esterase HI_1161 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1161 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.1e-09
Identity = 39/123 (31.71%), Postives = 61/123 (49.59%), Query Frame = 1


Query: 11  LVLDAPLQSLGFEVHHVSPHKVSGRLLVSPICCQPFKVLHGGVSALIAESLASM-GAHKA 70
           L  ++ +  LG E+       +   + V     QPF VLHGGVS  +AE++ S+ G+   
Sbjct: 15  LCSNSAVSHLGIEISAFGEDWIEATMPVDHRTMQPFGVLHGGVSVALAETIGSLAGSLCL 74

Query: 71  SGYQRVAGIHLSINHLKSASLGELVIAEAVPVTVGRTIQVWDVQLWKDLKERKVVVSTAR 130
              + V G+ ++ NHL+    G+ V A A P+ +GR IQVW + +     E   +   +R
Sbjct: 75  EEGKTVVGLDINANHLRPVRSGK-VTARATPINLGRNIQVWQIDI---RTEENKLCCVSR 133

Query: 131 VTL 133
           +TL
Sbjct: 135 LTL 133

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BLAST of Csa3G171760 vs. Swiss-Prot
Match: Y3380_VIBCH (Putative esterase VC_A0580 OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=VC_A0580 PE=3 SV=2)

HSP 1 Score: 59.7 bits (143), Expect = 3.3e-08
Identity = 37/122 (30.33%), Postives = 64/122 (52.46%), Query Frame = 1


Query: 17  LQSLGFEVHHVSPHKVSGRLLVSPICCQPFKVLHGGVSALIAESLASMGAHKASGYQRVA 76
           ++ L      V+ + +S  + V     QP  +LHGG S ++AE+L S+ A+ + G     
Sbjct: 22  IEHLNIIYTEVTENSISATMPVCHFTHQPLGMLHGGASVVLAETLGSVAANFSVGEDAYC 81

Query: 77  -GIHLSINHLKSASLGELVIAEAVPVTVGRTIQVWDVQLWKDLKERKVVVSTARVTLLSN 136
            G+ ++ NH+++   G LV   AVP+ +G + QVW +++ KD + R V +S   V +  +
Sbjct: 82  VGLDINANHVRAMREG-LVTGTAVPLHIGVSTQVWQIEI-KDEQGRLVCISRLTVAVKRS 141

Query: 137 MP 138
            P
Sbjct: 142 RP 141

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BLAST of Csa3G171760 vs. Swiss-Prot
Match: MENI_ECOLI (1,4-dihydroxy-2-naphthoyl-CoA hydrolase OS=Escherichia coli (strain K12) GN=menI PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.1e-07
Identity = 30/99 (30.30%), Postives = 51/99 (51.52%), Query Frame = 1


Query: 20  LGFEVHHVSPHKVSGRLLVSPICCQPFKVLHGGVSALIAESLASMGAHKAS-GYQRVAGI 79
           L     H+    +   + V     QPF +LHGG S ++AES+ S+  +  + G Q+V G+
Sbjct: 24  LDIRFEHIGDDTLEATMPVDSRTKQPFGLLHGGASVVLAESIGSVAGYLCTEGEQKVVGL 83

Query: 80  HLSINHLKSASLGELVIAEAVPVTVGRTIQVWDVQLWKD 118
            ++ NH++SA  G  V     P+ +G   QVW ++++ +
Sbjct: 84  EINANHVRSAREGR-VRGVCKPLHLGSRHQVWQIEIFDE 121

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BLAST of Csa3G171760 vs. TrEMBL
Match: A0A0A0L876_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171760 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 1.7e-80
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 1


Query: 1   MSSTDKSNPPLVLDAPLQSLGFEVHHVSPHKVSGRLLVSPICCQPFKVLHGGVSALIAES 60
           MSSTDKSNPPLVLDAPLQSLGFEVHHVSPHKVSGRLLVSPICCQPFKVLHGGVSALIAES
Sbjct: 1   MSSTDKSNPPLVLDAPLQSLGFEVHHVSPHKVSGRLLVSPICCQPFKVLHGGVSALIAES 60

Query: 61  LASMGAHKASGYQRVAGIHLSINHLKSASLGELVIAEAVPVTVGRTIQVWDVQLWKDLKE 120
           LASMGAHKASGYQRVAGIHLSINHLKSASLGELVIAEAVPVTVGRTIQVWDVQLWKDLKE
Sbjct: 61  LASMGAHKASGYQRVAGIHLSINHLKSASLGELVIAEAVPVTVGRTIQVWDVQLWKDLKE 120

Query: 121 RKVVVSTARVTLLSNMPVPKHVEDAADALKKFSKL 156
           RKVVVSTARVTLLSNMPVPKHVEDAADALKKFSKL
Sbjct: 121 RKVVVSTARVTLLSNMPVPKHVEDAADALKKFSKL 155

[Close]

BLAST of Csa3G171760 vs. TrEMBL
Match: V4JYW9_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10011840mg PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 7.1e-50
Identity = 103/159 (64.78%), Postives = 125/159 (78.62%), Query Frame = 1


Query: 1   MSSTDKSNPPLVLDAPLQSLGFEVHHVSPHKVSGRLLVSPICCQPFKVLHGGVSALIAES 60
           M S   S+    LD PL +LGFE+  +SP +V+GRL VSPICCQPFKVLHGGVSALIAES
Sbjct: 1   MDSVSASSKTKALDPPLHALGFEIDELSPTRVTGRLPVSPICCQPFKVLHGGVSALIAES 60

Query: 61  LASMGAHKASGYQRVAGIHLSINHLKSASLGELVIAEAVPVTVGRTIQVWDVQLWKDL-- 120
           LASMGAH ASG++RVAGI LSINHLKSA LG+LV AEA PV+ G+TIQVW+V+LWK    
Sbjct: 61  LASMGAHMASGFKRVAGIQLSINHLKSADLGDLVFAEASPVSTGKTIQVWEVKLWKTTKG 120

Query: 121 --KERKVVVSTARVTLLSNMPVPKHVEDAADALKKFSKL 156
             K  K ++S++RVTLL N+P+P+H +DA+D LK  SKL
Sbjct: 121 SEKANKSLISSSRVTLLCNLPIPEHAKDASDPLKLISKL 159

[Close]

BLAST of Csa3G171760 vs. TrEMBL
Match: A0A0D3DJR9_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 7.8e-49
Identity = 100/151 (66.23%), Postives = 124/151 (82.12%), Query Frame = 1


Query: 7   SNPPLVLDAPLQSLGFEVHHVSPHKVSGRLLVSPICCQPFKVLHGGVSALIAESLASMGA 66
           S+    LD PL +LGFE+  +SP +V+GRL VSPICCQPFKVLHGGVSALIAESLAS+GA
Sbjct: 5   SSKTKALDPPLHALGFEIDELSPTRVTGRLPVSPICCQPFKVLHGGVSALIAESLASIGA 64

Query: 67  HKASGYQRVAGIHLSINHLKSASLGELVIAEAVPVTVGRTIQVWDVQLWKDLK--ERKVV 126
           H ASG++RVAGI LSINH+KSA LG+LV AEA PV+ G+TIQVW+V+LWK  +  E + +
Sbjct: 65  HMASGFKRVAGIQLSINHVKSADLGDLVFAEASPVSAGKTIQVWEVKLWKSKEGSENRTL 124

Query: 127 VSTARVTLLSNMPVPKHVEDAADALKKFSKL 156
           +S++RVTLL N+PVP HV+DA+D LK  SKL
Sbjct: 125 ISSSRVTLLCNLPVPDHVKDASDPLKLISKL 155

[Close]

BLAST of Csa3G171760 vs. TrEMBL
Match: A0A078CMR0_BRANA (BnaC08g03640D protein OS=Brassica napus GN=BnaC08g03640D PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.3e-48
Identity = 100/151 (66.23%), Postives = 124/151 (82.12%), Query Frame = 1


Query: 7   SNPPLVLDAPLQSLGFEVHHVSPHKVSGRLLVSPICCQPFKVLHGGVSALIAESLASMGA 66
           S+    LD PL +LGFE+  +SP +V+GRLLVS ICCQPFKVLHGGVSALIAESLAS+GA
Sbjct: 5   SSKTKALDPPLHALGFEIDELSPTRVTGRLLVSRICCQPFKVLHGGVSALIAESLASIGA 64

Query: 67  HKASGYQRVAGIHLSINHLKSASLGELVIAEAVPVTVGRTIQVWDVQLWKDLK--ERKVV 126
           H ASG++RVAGI LSINH+KSA LG+LV AEA PV+ G+TIQVW+V+LWK  +  E + +
Sbjct: 65  HMASGFKRVAGIQLSINHVKSADLGDLVFAEASPVSAGKTIQVWEVKLWKSKEGSENRTL 124

Query: 127 VSTARVTLLSNMPVPKHVEDAADALKKFSKL 156
           +S++RVTLL N+PVP HV+DA+D LK  SKL
Sbjct: 125 ISSSRVTLLCNLPVPDHVKDASDPLKLISKL 155

[Close]

BLAST of Csa3G171760 vs. TrEMBL
Match: M4DCB4_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.3e-48
Identity = 100/151 (66.23%), Postives = 123/151 (81.46%), Query Frame = 1


Query: 7   SNPPLVLDAPLQSLGFEVHHVSPHKVSGRLLVSPICCQPFKVLHGGVSALIAESLASMGA 66
           S+    LD PL +LGFE+  +SP +V+GRL VSPICCQPFKVLHGGVSALIAESLASMGA
Sbjct: 5   SSKTKALDPPLHALGFEIDELSPTRVTGRLPVSPICCQPFKVLHGGVSALIAESLASMGA 64

Query: 67  HKASGYQRVAGIHLSINHLKSASLGELVIAEAVPVTVGRTIQVWDVQLWKDLK--ERKVV 126
           H ASG++RVAGI LSINH+KSA LG+LV AEA PV+ G+TIQVW+V+LWK  +  E + +
Sbjct: 65  HMASGFKRVAGIQLSINHVKSADLGDLVFAEASPVSTGKTIQVWEVKLWKSKEGSENRTL 124

Query: 127 VSTARVTLLSNMPVPKHVEDAADALKKFSKL 156
           +S++ VTLL N+PVP HV+DA+D LK  SKL
Sbjct: 125 ISSSIVTLLCNLPVPDHVKDASDPLKLISKL 155

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BLAST of Csa3G171760 vs. TAIR10
Match: AT1G48320.1 (AT1G48320.1 Thioesterase superfamily protein)

HSP 1 Score: 194.5 bits (493), Expect = 4.8e-50
Identity = 94/146 (64.38%), Postives = 117/146 (80.14%), Query Frame = 1


Query: 13  LDAPLQSLGFEVHHVSPHKVSGRLLVSPICCQPFKVLHGGVSALIAESLASMGAHKASGY 72
           +D PL  LGFE   +SP +++GRL VSP+CCQPFKVLHGGVSALIAESLASMGAH ASG+
Sbjct: 11  IDPPLHMLGFEFDELSPTRITGRLPVSPVCCQPFKVLHGGVSALIAESLASMGAHMASGF 70

Query: 73  QRVAGIHLSINHLKSASLGELVIAEAVPVTVGRTIQVWDVQLWKDL---KERKVVVSTAR 132
           +RVAGI LSINHLKSA LG+LV AEA PV+ G+TIQVW+V+LWK     K  K+++S++R
Sbjct: 71  KRVAGIQLSINHLKSADLGDLVFAEATPVSTGKTIQVWEVKLWKTTQKDKANKILISSSR 130

Query: 133 VTLLSNMPVPKHVEDAADALKKFSKL 156
           VTL+ N+P+P + +DAA+ LK  +KL
Sbjct: 131 VTLICNLPIPDNAKDAANMLKMVAKL 156

[Close]

BLAST of Csa3G171760 vs. TAIR10
Match: AT5G48950.1 (AT5G48950.1 Thioesterase superfamily protein)

HSP 1 Score: 179.5 bits (454), Expect = 1.6e-45
Identity = 91/156 (58.33%), Postives = 117/156 (75.00%), Query Frame = 1


Query: 5   DKSNPPLVLDAPLQSLGFEVHHVSPHKVSGRLLVSPICCQPFKVLHGGVSALIAESLASM 64
           D  +P  ++D PL+ LGF    +S  +VSG L ++  CCQPFKVLHGGVSALIAE+LAS+
Sbjct: 2   DPKSPEFIIDQPLKILGFVFDELSATRVSGHLTLTEKCCQPFKVLHGGVSALIAEALASL 61

Query: 65  GAHKASGYQRVAGIHLSINHLKSASLGELVIAEAVPVTVGRTIQVWDVQLWKDLK----E 124
           GA  ASG++RVAGIHLSI+HL+ A+LGE+V AE+ PV+VG+ IQVW+V+LWK  K    +
Sbjct: 62  GAGIASGFKRVAGIHLSIHHLRPAALGEIVFAESFPVSVGKNIQVWEVRLWKAKKTETPD 121

Query: 125 RKVVVSTARVTLLSNMPVPKHVEDAADALKK-FSKL 156
            K++VST+RVTL   +P+P HV+DA D LKK  SKL
Sbjct: 122 NKIMVSTSRVTLFCGLPIPDHVKDAPDELKKVISKL 157

[Close]

BLAST of Csa3G171760 vs. NCBI nr
Match: gi|449459808|ref|XP_004147638.1| (PREDICTED: 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like [Cucumis sativus])

HSP 1 Score: 306.6 bits (784), Expect = 2.5e-80
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 1


Query: 1   MSSTDKSNPPLVLDAPLQSLGFEVHHVSPHKVSGRLLVSPICCQPFKVLHGGVSALIAES 60
           MSSTDKSNPPLVLDAPLQSLGFEVHHVSPHKVSGRLLVSPICCQPFKVLHGGVSALIAES
Sbjct: 1   MSSTDKSNPPLVLDAPLQSLGFEVHHVSPHKVSGRLLVSPICCQPFKVLHGGVSALIAES 60

Query: 61  LASMGAHKASGYQRVAGIHLSINHLKSASLGELVIAEAVPVTVGRTIQVWDVQLWKDLKE 120
           LASMGAHKASGYQRVAGIHLSINHLKSASLGELVIAEAVPVTVGRTIQVWDVQLWKDLKE
Sbjct: 61  LASMGAHKASGYQRVAGIHLSINHLKSASLGELVIAEAVPVTVGRTIQVWDVQLWKDLKE 120

Query: 121 RKVVVSTARVTLLSNMPVPKHVEDAADALKKFSKL 156
           RKVVVSTARVTLLSNMPVPKHVEDAADALKKFSKL
Sbjct: 121 RKVVVSTARVTLLSNMPVPKHVEDAADALKKFSKL 155

[Close]

BLAST of Csa3G171760 vs. NCBI nr
Match: gi|659077071|ref|XP_008439017.1| (PREDICTED: uncharacterized protein LOC103483935 [Cucumis melo])

HSP 1 Score: 284.6 bits (727), Expect = 1.0e-73
Identity = 142/155 (91.61%), Postives = 149/155 (96.13%), Query Frame = 1


Query: 1   MSSTDKSNPPLVLDAPLQSLGFEVHHVSPHKVSGRLLVSPICCQPFKVLHGGVSALIAES 60
           MSSTD  NPPL+LDAPLQS GFE+H VSPHKV+GRLLVS ICCQPFKVLHGGVSALIAES
Sbjct: 22  MSSTDNPNPPLLLDAPLQSFGFEIHQVSPHKVAGRLLVSSICCQPFKVLHGGVSALIAES 81

Query: 61  LASMGAHKASGYQRVAGIHLSINHLKSASLGELVIAEAVPVTVGRTIQVWDVQLWKDLKE 120
           LASMGAHKASGYQRVAGIHLSINHLKSA+LGELVIAEAVPVTVGRTIQVWDVQLWKDLKE
Sbjct: 82  LASMGAHKASGYQRVAGIHLSINHLKSAALGELVIAEAVPVTVGRTIQVWDVQLWKDLKE 141

Query: 121 RKVVVSTARVTLLSNMPVPKHVEDAADALKKFSKL 156
           +KVVVSTARVTLL NMPVPKHV++AADALKKFSKL
Sbjct: 142 QKVVVSTARVTLLCNMPVPKHVQNAADALKKFSKL 176

[Close]

BLAST of Csa3G171760 vs. NCBI nr
Match: gi|567134190|ref|XP_006393434.1| (hypothetical protein EUTSA_v10011840mg [Eutrema salsugineum])

HSP 1 Score: 204.9 bits (520), Expect = 1.0e-49
Identity = 103/159 (64.78%), Postives = 125/159 (78.62%), Query Frame = 1


Query: 1   MSSTDKSNPPLVLDAPLQSLGFEVHHVSPHKVSGRLLVSPICCQPFKVLHGGVSALIAES 60
           M S   S+    LD PL +LGFE+  +SP +V+GRL VSPICCQPFKVLHGGVSALIAES
Sbjct: 1   MDSVSASSKTKALDPPLHALGFEIDELSPTRVTGRLPVSPICCQPFKVLHGGVSALIAES 60

Query: 61  LASMGAHKASGYQRVAGIHLSINHLKSASLGELVIAEAVPVTVGRTIQVWDVQLWKDL-- 120
           LASMGAH ASG++RVAGI LSINHLKSA LG+LV AEA PV+ G+TIQVW+V+LWK    
Sbjct: 61  LASMGAHMASGFKRVAGIQLSINHLKSADLGDLVFAEASPVSTGKTIQVWEVKLWKTTKG 120

Query: 121 --KERKVVVSTARVTLLSNMPVPKHVEDAADALKKFSKL 156
             K  K ++S++RVTLL N+P+P+H +DA+D LK  SKL
Sbjct: 121 SEKANKSLISSSRVTLLCNLPIPEHAKDASDPLKLISKL 159

[Close]

BLAST of Csa3G171760 vs. NCBI nr
Match: gi|720076664|ref|XP_010279673.1| (PREDICTED: uncharacterized protein LOC104613530 [Nelumbo nucifera])

HSP 1 Score: 203.4 bits (516), Expect = 3.0e-49
Identity = 100/157 (63.69%), Postives = 126/157 (80.25%), Query Frame = 1


Query: 2   SSTDKSNPPLVLDAPLQSLGFEVHHVSPHKVSGRLLVSPICCQPFKVLHGGVSALIAESL 61
           SS   SN    +DAPL ++GFE+  +SP KV+GRL V+P CCQPFKVLHGGVSALIAESL
Sbjct: 4   SSASPSNKRPAVDAPLHAIGFELEELSPEKVTGRLKVTPSCCQPFKVLHGGVSALIAESL 63

Query: 62  ASMGAHKASGYQRVAGIHLSINHLKSASLGELVIAEAVPVTVGRTIQVWDVQLWK---DL 121
           AS+GAH ASG QRVAGIHLSINH+K A LG++V AEA P+++G+TIQVW+VQLWK     
Sbjct: 64  ASIGAHMASGLQRVAGIHLSINHVKRAELGDVVAAEARPISLGKTIQVWEVQLWKIDPSN 123

Query: 122 KERKVVVSTARVTLLSNMPVPKHVEDAADALKKFSKL 156
              K ++S++RVTLLSNMPVP+H +DA + LKK+++L
Sbjct: 124 SGSKALISSSRVTLLSNMPVPEHAKDAGEPLKKYARL 160

[Close]

BLAST of Csa3G171760 vs. NCBI nr
Match: gi|922548596|ref|XP_013602267.1| (PREDICTED: 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 isoform X1 [Brassica oleracea var. oleracea])

HSP 1 Score: 201.4 bits (511), Expect = 1.1e-48
Identity = 100/151 (66.23%), Postives = 124/151 (82.12%), Query Frame = 1


Query: 7   SNPPLVLDAPLQSLGFEVHHVSPHKVSGRLLVSPICCQPFKVLHGGVSALIAESLASMGA 66
           S+    LD PL +LGFE+  +SP +V+GRL VSPICCQPFKVLHGGVSALIAESLAS+GA
Sbjct: 5   SSKTKALDPPLHALGFEIDELSPTRVTGRLPVSPICCQPFKVLHGGVSALIAESLASIGA 64

Query: 67  HKASGYQRVAGIHLSINHLKSASLGELVIAEAVPVTVGRTIQVWDVQLWKDLK--ERKVV 126
           H ASG++RVAGI LSINH+KSA LG+LV AEA PV+ G+TIQVW+V+LWK  +  E + +
Sbjct: 65  HMASGFKRVAGIQLSINHVKSADLGDLVFAEASPVSAGKTIQVWEVKLWKSKEGSENRTL 124

Query: 127 VSTARVTLLSNMPVPKHVEDAADALKKFSKL 156
           +S++RVTLL N+PVP HV+DA+D LK  SKL
Sbjct: 125 ISSSRVTLLCNLPVPDHVKDASDPLKLISKL 155

The following BLAST results are available for this feature:

BLAST of Csa3G171760 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DNAT1_ARATH	8.6e-49	64.38	1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 OS=Arabidopsis thaliana GN=DHNAT1 P...	[more]
DNAT2_ARATH	2.9e-44	58.33	1,4-dihydroxy-2-naphthoyl-CoA thioesterase 2 OS=Arabidopsis thaliana GN=DHNAT2 P...	[more]
Y1161_HAEIN	5.1e-09	31.71	Putative esterase HI_1161 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 111...	[more]
Y3380_VIBCH	3.3e-08	30.33	Putative esterase VC_A0580 OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / E...	[more]
MENI_ECOLI	2.1e-07	30.30	1,4-dihydroxy-2-naphthoyl-CoA hydrolase OS=Escherichia coli (strain K12) GN=menI...	[more]

BLAST of Csa3G171760 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L876_CUCSA	1.7e-80	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171760 PE=4 SV=1	[more]
V4JYW9_EUTSA	7.1e-50	64.78	Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10011840mg PE=4 SV=1	[more]
A0A0D3DJR9_BRAOL	7.8e-49	66.23	Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1	[more]
A0A078CMR0_BRANA	1.3e-48	66.23	BnaC08g03640D protein OS=Brassica napus GN=BnaC08g03640D PE=4 SV=1	[more]
M4DCB4_BRARP	2.3e-48	66.23	Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1	[more]

BLAST of Csa3G171760 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G48320.1	4.8e-50	64.38	Thioesterase superfamily protein	[more]
AT5G48950.1	1.6e-45	58.33	Thioesterase superfamily protein	[more]

BLAST of Csa3G171760 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449459808\|ref\|XP_004147638.1\|	2.5e-80	100.00	PREDICTED: 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like [Cucumis sativus]	[more]
gi\|659077071\|ref\|XP_008439017.1\|	1.0e-73	91.61	PREDICTED: uncharacterized protein LOC103483935 [Cucumis melo]	[more]
gi\|567134190\|ref\|XP_006393434.1\|	1.0e-49	64.78	hypothetical protein EUTSA_v10011840mg [Eutrema salsugineum]	[more]
gi\|720076664\|ref\|XP_010279673.1\|	3.0e-49	63.69	PREDICTED: uncharacterized protein LOC104613530 [Nelumbo nucifera]	[more]
gi\|922548596\|ref\|XP_013602267.1\|	1.1e-48	66.23	PREDICTED: 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 isoform X1 [Brassica ole...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003736	PAAI_dom
IPR006683	Thioestr_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0042372	phylloquinone biosynthetic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005777	peroxisome
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU112252	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa3G171760.1	Csa3G171760.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU112252	CU112252	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003736	Phenylacetic acid degradation-related domain	TIGRFAMs	TIGR00369	TIGR00369	coord: 17..127 score: 1.3
IPR006683	Thioesterase domain	PFAM	PF03061	4HBT	coord: 47..117 score: 1.5
None	No IPR available	PANTHER	PTHR12418	FAMILY NOT NAMED	coord: 11..147 score: 5.0
None	No IPR available	PANTHER	PTHR12418:SF36	SUBFAMILY NOT NAMED	coord: 11..147 score: 5.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa3G171760	Cla021839	Watermelon (97103) v1	cuwmB233
Csa3G171760	MELO3C006763	Melon (DHL92) v3.5.1	cumeB236
Csa3G171760	ClCG05G006960	Watermelon (Charleston Gray)	cuwcgB222
Csa3G171760	Lsi05G013750	Bottle gourd (USVL1VR-Ls)	culsiB210
Csa3G171760	MELO3C006763.2	Melon (DHL92) v3.6.1	cumedB223
Csa3G171760	Cla97C05G088620	Watermelon (97103) v2	cuwmbB204
Csa3G171760	Bhi01G000834	Wax gourd	cuwgoB269
Csa3G171760	CSPI03G15480	Wild cucumber (PI 183967)	cpicuB120
Csa3G171760	Cucsa.252060	Cucumber (Gy14) v1	cgycuB366
Csa3G171760	CmaCh14G015480	Cucurbita maxima (Rimu)	cmacuB253
Csa3G171760	CmoCh14G015840	Cucurbita moschata (Rifu)	cmocuB239
Csa3G171760	Cp4.1LG03g12200	Cucurbita pepo (Zucchini)	cpecuB609
Csa3G171760	CsGy3G015540	Cucumber (Gy14) v2	cgybcuB109
Csa3G171760	Carg19587	Silver-seed gourd	carcuB0306

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa3G171760	Cucurbita maxima (Rimu)	cmacuB814
Csa3G171760	Cucurbita moschata (Rifu)	cmocuB806
Csa3G171760	Cucurbita pepo (Zucchini)	cpecuB859
Csa3G171760	Silver-seed gourd	carcuB0714