Cp4.1LG03g12200 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG03g12200
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Thioesterase family protein
Location	Cp4.1LG03 : 10531427 .. 10533256 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCATCAAAATCCGAATGATCCGCCGCTTCCGTCGCCGCCGTCATCCACGACGGCGATTCTGGACTCTCCGCTCAACGCCGTCGGGTTCGAGATTGAAATCTTATCTCCTCACAGAGTATCCGGCCGCATTGTCGTCTCTCCGAAGTGCTGCCAGGTACGTTATTGAGTTTCGATTTCAATAAAATGATCCGCCGATTAGAATTTGGTTACGAAAATGAAAATGAAAAGCGCAGCCGTTTAAGGTGCTGCACGGCGGCGTATCGGCGATGATAGCGGAGGCGCTGGCGAGCATTGGAGCACAGATGGCGGCGGGATTCAAAAGAGTGGCGGGATTTCATCTCAGTATCGATCATTTACAGAGCGCAGAGATCGGCGATCTTGTTCTCGCTGAAGCGACTCCCCTGTCCCTCGGCAAGGCTATTCAGGTCACGCCTATTTTCTTTTTCTTTTTCTATATTATTATTATTCTTATTATTTTACTAATAAGTTCCTAAAATATATATTTATTAGGAATAAAGTAAATTAATTATAATTAAATTCTTTATTACTTGATTTTTTTTAAAAAAAAAATTAAATTAACATTATTTAAAAAAAAAAATCTTGCATTTTGATTATTTTAAATTAATTAAATTAAAAATAAAAAAGTGAGAATTTGTAAAATTTTTGGGGTGAAAGTATAAAATCTTGAAATTTAAAGGAGCAGTGTGGTTGCAGATCCACCGCCAGTAGATATTGTCCTCTTTGGGCTTTCCCTTTCGGGCTTCCCCTCAAGGCTTTAAAACACGTTGTCTTCTTTGTGTTTTCCCTCTCGGGCTTCCACTCAAGGCTTTAAAACGCGTTGTCTTCTTTGGGTTTTCCCTCTCGGGCTTCCACTCAAGGCTTTAAAACGCGTTGTCCTCTATGGGTTTTCCTCTCCTACTAGGGGAAGGTTTCCACACTCTTATAAATGGTGCACTCCCAATCGGACATCACAATCCACCCAATGTGGGACATCACAATCCACCCATGTGGGACATCACAATCCACCCATGTGGGACATCACAATCCACCCAATGTGGGACATCACAATCCACCCCTTCGGGACCCAGCGTTCTCGCTAGCACTCCCAATCGATGTGGGACCACCCCCAAATCCGCCTCCTTTGGGGCCCAGCGTCCTTACTGGCACACTGCCTCGTGTCTACCCCTCTTTGGGGAACAGCGAGAAAGCTAGCACATCGTTCGGTGTCTGGCTCTGATACCATTTGTAACGACCCAGATTCATCGCTAGCAGATATTGTCCTCTTTGGGCTATAAGGGGGAGGAGAACAAACCACCATTTATAAGGGGGTGGAGACCTTCCCCTATCAGACGCGTTTTAAAGTCTTGAGGGGAAGTCCAAAAGGGGAAGCCCGAAAGGGAAAGCCCAGAAGGACAATATCTGCTAGCGGGATTTGGATCAACCAGATTTTAAAACTTTTCCAAGTTGAACTCAAGCAGTGTATTAGGGAAAAGTTAGGGATAAAAGTGTAAAATCATAAAATCTAATTTCCAATACACACCTTCCATATTCATAAATTTATTTAATATTCAAACCATAAACAAAAATATTAAGAGTGGATTTGAATTTATCTTAAAAATGATAGAAAATCAATTCAAACCGACTCTGAATAGTACGTACATACGTATAATAGGTATGGGAAGTAGAACTATGGAAGGCGAAAAGTTCGAGCGTGGAGAGGAGGGACCTTGTGGCGTCGTCGAGGGTCACCCTTCTATGCAACATGCCTGTGCCGAAACATGCCCAACCCTTGGTCGACACTCTCAAGAGGTTAGCAAAGTTGTAA

mRNA sequence

ATGGATCATCAAAATCCGAATGATCCGCCGCTTCCGTCGCCGCCGTCATCCACGACGGCGATTCTGGACTCTCCGCTCAACGCCGTCGGGTTCGAGATTGAAATCTTATCTCCTCACAGAGTATCCGGCCGCATTGTCGTCTCTCCGAAGTGCTGCCAGCCGTTTAAGGTGCTGCACGGCGGCGTATCGGCGATGATAGCGGAGGCGCTGGCGAGCATTGGAGCACAGATGGCGGCGGGATTCAAAAGAGTGGCGGGATTTCATCTCAGTATCGATCATTTACAGAGCGCAGAGATCGGCGATCTTGTTCTCGCTGAAGCGACTCCCCTGTCCCTCGGCAAGGCTATTCAGGTATGGGAAGTAGAACTATGGAAGGCGAAAAGTTCGAGCGTGGAGAGGAGGGACCTTGTGGCGTCGTCGAGGGTCACCCTTCTATGCAACATGCCTGTGCCGAAACATGCCCAACCCTTGGTCGACACTCTCAAGAGGTTAGCAAAGTTGTAA

Coding sequence (CDS)

ATGGATCATCAAAATCCGAATGATCCGCCGCTTCCGTCGCCGCCGTCATCCACGACGGCGATTCTGGACTCTCCGCTCAACGCCGTCGGGTTCGAGATTGAAATCTTATCTCCTCACAGAGTATCCGGCCGCATTGTCGTCTCTCCGAAGTGCTGCCAGCCGTTTAAGGTGCTGCACGGCGGCGTATCGGCGATGATAGCGGAGGCGCTGGCGAGCATTGGAGCACAGATGGCGGCGGGATTCAAAAGAGTGGCGGGATTTCATCTCAGTATCGATCATTTACAGAGCGCAGAGATCGGCGATCTTGTTCTCGCTGAAGCGACTCCCCTGTCCCTCGGCAAGGCTATTCAGGTATGGGAAGTAGAACTATGGAAGGCGAAAAGTTCGAGCGTGGAGAGGAGGGACCTTGTGGCGTCGTCGAGGGTCACCCTTCTATGCAACATGCCTGTGCCGAAACATGCCCAACCCTTGGTCGACACTCTCAAGAGGTTAGCAAAGTTGTAA

Protein sequence

MDHQNPNDPPLPSPPSSTTAILDSPLNAVGFEIEILSPHRVSGRIVVSPKCCQPFKVLHGGVSAMIAEALASIGAQMAAGFKRVAGFHLSIDHLQSAEIGDLVLAEATPLSLGKAIQVWEVELWKAKSSSVERRDLVASSRVTLLCNMPVPKHAQPLVDTLKRLAKL

Homology

[Close]

BLAST of Cp4.1LG03g12200 vs. Swiss-Prot
Match: DNAT1_ARATH (1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 OS=Arabidopsis thaliana GN=DHNAT1 PE=1 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 3.2e-49
Identity = 94/152 (61.84%), Postives = 121/152 (79.61%), Query Frame = 1


Query: 16  SSTTAILDSPLNAVGFEIEILSPHRVSGRIVVSPKCCQPFKVLHGGVSAMIAEALASIGA 75
           SS T  +D PL+ +GFE + LSP R++GR+ VSP CCQPFKVLHGGVSA+IAE+LAS+GA
Sbjct: 5   SSNTKAIDPPLHMLGFEFDELSPTRITGRLPVSPVCCQPFKVLHGGVSALIAESLASMGA 64

Query: 76  QMAAGFKRVAGFHLSIDHLQSAEIGDLVLAEATPLSLGKAIQVWEVELWKAKSSSVERRD 135
            MA+GFKRVAG  LSI+HL+SA++GDLV AEATP+S GK IQVWEV+LWK        + 
Sbjct: 65  HMASGFKRVAGIQLSINHLKSADLGDLVFAEATPVSTGKTIQVWEVKLWKTTQKDKANKI 124

Query: 136 LVASSRVTLLCNMPVPKHAQPLVDTLKRLAKL 168
           L++SSRVTL+CN+P+P +A+   + LK +AKL
Sbjct: 125 LISSSRVTLICNLPIPDNAKDAANMLKMVAKL 156

[Close]

BLAST of Cp4.1LG03g12200 vs. Swiss-Prot
Match: DNAT2_ARATH (1,4-dihydroxy-2-naphthoyl-CoA thioesterase 2 OS=Arabidopsis thaliana GN=DHNAT2 PE=2 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 7.5e-43
Identity = 85/151 (56.29%), Postives = 113/151 (74.83%), Query Frame = 1


Query: 15  PSSTTAILDSPLNAVGFEIEILSPHRVSGRIVVSPKCCQPFKVLHGGVSAMIAEALASIG 74
           P S   I+D PL  +GF  + LS  RVSG + ++ KCCQPFKVLHGGVSA+IAEALAS+G
Sbjct: 3   PKSPEFIIDQPLKILGFVFDELSATRVSGHLTLTEKCCQPFKVLHGGVSALIAEALASLG 62

Query: 75  AQMAAGFKRVAGFHLSIDHLQSAEIGDLVLAEATPLSLGKAIQVWEVELWKAKSSSV-ER 134
           A +A+GFKRVAG HLSI HL+ A +G++V AE+ P+S+GK IQVWEV LWKAK +   + 
Sbjct: 63  AGIASGFKRVAGIHLSIHHLRPAALGEIVFAESFPVSVGKNIQVWEVRLWKAKKTETPDN 122

Query: 135 RDLVASSRVTLLCNMPVPKHAQPLVDTLKRL 165
           + +V++SRVTL C +P+P H +   D LK++
Sbjct: 123 KIMVSTSRVTLFCGLPIPDHVKDAPDELKKV 153

[Close]

BLAST of Cp4.1LG03g12200 vs. Swiss-Prot
Match: Y1161_HAEIN (Putative esterase HI_1161 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1161 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-10
Identity = 42/123 (34.15%), Postives = 65/123 (52.85%), Query Frame = 1


Query: 23  DSPLNAVGFEIEILSPHRVSGRIVVSPKCCQPFKVLHGGVSAMIAEALASI-GAQMAAGF 82
           +S ++ +G EI       +   + V  +  QPF VLHGGVS  +AE + S+ G+      
Sbjct: 18  NSAVSHLGIEISAFGEDWIEATMPVDHRTMQPFGVLHGGVSVALAETIGSLAGSLCLEEG 77

Query: 83  KRVAGFHLSIDHLQSAEIGDLVLAEATPLSLGKAIQVWEVELWKAKSSSVERRDLVASSR 142
           K V G  ++ +HL+    G  V A ATP++LG+ IQVW++++        E   L   SR
Sbjct: 78  KTVVGLDINANHLRPVRSGK-VTARATPINLGRNIQVWQIDI------RTEENKLCCVSR 133

Query: 143 VTL 145
           +TL
Sbjct: 138 LTL 133

[Close]

BLAST of Cp4.1LG03g12200 vs. Swiss-Prot
Match: MENI_ECOLI (1,4-dihydroxy-2-naphthoyl-CoA hydrolase OS=Escherichia coli (strain K12) GN=menI PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.7e-08
Identity = 39/121 (32.23%), Postives = 63/121 (52.07%), Query Frame = 1


Query: 27  NAVGF---EIEILSPHRVSGRIVVSPKCCQPFKVLHGGVSAMIAEALASIGAQMAA-GFK 86
           N VGF     E +    +   + V  +  QPF +LHGG S ++AE++ S+   +   G +
Sbjct: 19  NMVGFLDIRFEHIGDDTLEATMPVDSRTKQPFGLLHGGASVVLAESIGSVAGYLCTEGEQ 78

Query: 87  RVAGFHLSIDHLQSAEIGDLVLAEATPLSLGKAIQVWEVELWKAKSSSVERRDLVASSRV 144
           +V G  ++ +H++SA  G  V     PL LG   QVW++E++       E+  L  SSR+
Sbjct: 79  KVVGLEINANHVRSAREG-RVRGVCKPLHLGSRHQVWQIEIFD------EKGRLCCSSRL 132

[Close]

BLAST of Cp4.1LG03g12200 vs. Swiss-Prot
Match: Y3380_VIBCH (Putative esterase VC_A0580 OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=VC_A0580 PE=3 SV=2)

HSP 1 Score: 57.4 bits (137), Expect = 1.8e-07
Identity = 35/108 (32.41%), Postives = 57/108 (52.78%), Query Frame = 1


Query: 53  QPFKVLHGGVSAMIAEALASIGAQMAAGFKR-VAGFHLSIDHLQSAEIGDLVLAEATPLS 112
           QP  +LHGG S ++AE L S+ A  + G      G  ++ +H+++   G LV   A PL 
Sbjct: 49  QPLGMLHGGASVVLAETLGSVAANFSVGEDAYCVGLDINANHVRAMREG-LVTGTAVPLH 108

Query: 113 LGKAIQVWEVELWKAKSSSVERRDLVASSRVTLLCNMPVPKHAQPLVD 160
           +G + QVW++E+        E+  LV  SR+T+      P  A+P+ +
Sbjct: 109 IGVSTQVWQIEI------KDEQGRLVCISRLTVAVKRSRPNQAKPVAE 149

[Close]

BLAST of Cp4.1LG03g12200 vs. TrEMBL
Match: A0A0A0L5H6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171770 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 3.7e-73
Identity = 145/171 (84.80%), Postives = 161/171 (94.15%), Query Frame = 1


Query: 1   MDHQNP-NDPP---LPSPPSSTTAILDSPLNAVGFEIEILSPHRVSGRIVVSPKCCQPFK 60
           MD+QNP NDPP   LPSP SSTT+ILD+PLNAVGFEIEI+SP+RVSGRIVVSPKCCQ FK
Sbjct: 1   MDNQNPQNDPPLPSLPSPSSSTTSILDAPLNAVGFEIEIISPNRVSGRIVVSPKCCQVFK 60

Query: 61  VLHGGVSAMIAEALASIGAQMAAGFKRVAGFHLSIDHLQSAEIGDLVLAEATPLSLGKAI 120
           V+HGGVSAMIAEALAS+GAQ+A+GFKRVAGFHLSIDHLQSA++G+LVLAEA PLS+G AI
Sbjct: 61  VMHGGVSAMIAEALASLGAQIASGFKRVAGFHLSIDHLQSAKMGELVLAEAIPLSVGDAI 120

Query: 121 QVWEVELWKAKSSSVERRDLVASSRVTLLCNMPVPKHAQPLVDTLKRLAKL 168
           QVWEVELWKAKSSS+ERRDLVASSRVTLLCNMP+PKH+QPLVDTLK  AKL
Sbjct: 121 QVWEVELWKAKSSSIERRDLVASSRVTLLCNMPIPKHSQPLVDTLKTFAKL 171

[Close]

BLAST of Cp4.1LG03g12200 vs. TrEMBL
Match: A0A0D3DJR9_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 5.8e-50
Identity = 103/152 (67.76%), Postives = 126/152 (82.89%), Query Frame = 1


Query: 16  SSTTAILDSPLNAVGFEIEILSPHRVSGRIVVSPKCCQPFKVLHGGVSAMIAEALASIGA 75
           SS T  LD PL+A+GFEI+ LSP RV+GR+ VSP CCQPFKVLHGGVSA+IAE+LASIGA
Sbjct: 5   SSKTKALDPPLHALGFEIDELSPTRVTGRLPVSPICCQPFKVLHGGVSALIAESLASIGA 64

Query: 76  QMAAGFKRVAGFHLSIDHLQSAEIGDLVLAEATPLSLGKAIQVWEVELWKAKSSSVERRD 135
            MA+GFKRVAG  LSI+H++SA++GDLV AEA+P+S GK IQVWEV+LWK+K  S E R 
Sbjct: 65  HMASGFKRVAGIQLSINHVKSADLGDLVFAEASPVSAGKTIQVWEVKLWKSKEGS-ENRT 124

Query: 136 LVASSRVTLLCNMPVPKHAQPLVDTLKRLAKL 168
           L++SSRVTLLCN+PVP H +   D LK ++KL
Sbjct: 125 LISSSRVTLLCNLPVPDHVKDASDPLKLISKL 155

[Close]

BLAST of Cp4.1LG03g12200 vs. TrEMBL
Match: A0A061ERE5_THECC (Thioesterase superfamily protein OS=Theobroma cacao GN=TCM_021511 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 5.8e-50
Identity = 100/152 (65.79%), Postives = 126/152 (82.89%), Query Frame = 1


Query: 16  SSTTAILDSPLNAVGFEIEILSPHRVSGRIVVSPKCCQPFKVLHGGVSAMIAEALASIGA 75
           S+ TA LD+PL+  GFE++ LSP +V+GR+ V+ KCCQPFKVLHGGVSA+IAEALASIGA
Sbjct: 105 SAKTANLDAPLHVFGFELQDLSPTKVTGRLQVTQKCCQPFKVLHGGVSALIAEALASIGA 164

Query: 76  QMAAGFKRVAGFHLSIDHLQSAEIGDLVLAEATPLSLGKAIQVWEVELWKAKSSSVERRD 135
            MA+G++RVAG HLSI+HL+ AE+GDL+ AEATP+++GK IQVWEV LWK   SS   R 
Sbjct: 165 HMASGYQRVAGIHLSINHLKRAELGDLIFAEATPVNVGKTIQVWEVRLWKTDPSSSGSRS 224

Query: 136 LVASSRVTLLCNMPVPKHAQPLVDTLKRLAKL 168
           LV+SSRV+LLCNMPVP+HA+   + LK+ AKL
Sbjct: 225 LVSSSRVSLLCNMPVPEHAKDAGENLKKFAKL 256

[Close]

BLAST of Cp4.1LG03g12200 vs. TrEMBL
Match: M5WVS9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012406mg PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 9.9e-50
Identity = 100/162 (61.73%), Postives = 128/162 (79.01%), Query Frame = 1


Query: 6   PNDPPLPSPPSSTTAILDSPLNAVGFEIEILSPHRVSGRIVVSPKCCQPFKVLHGGVSAM 65
           P+  P P  P S T  LD PL+ +GFEIE ++P +VSG + V+ KCCQPFKVLHGGVSA+
Sbjct: 9   PSSAPPPPSPRSKTEALDVPLHEIGFEIEEVTPKKVSGHLHVTQKCCQPFKVLHGGVSAL 68

Query: 66  IAEALASIGAQMAAGFKRVAGFHLSIDHLQSAEIGDLVLAEATPLSLGKAIQVWEVELWK 125
           IAE+LASIGA +A+GF+RVAG HLSI+HL+ AE+GD + AEATP++LGK IQVWEV LWK
Sbjct: 69  IAESLASIGAHLASGFQRVAGIHLSINHLKRAELGDRIFAEATPVNLGKTIQVWEVRLWK 128

Query: 126 AKSSSVERRDLVASSRVTLLCNMPVPKHAQPLVDTLKRLAKL 168
              S+ + + +V+SSRVTLLCNMPVP+HA+   D +K+ AKL
Sbjct: 129 INPSNSDIKSIVSSSRVTLLCNMPVPEHAKDAGDAVKKYAKL 170

[Close]

BLAST of Cp4.1LG03g12200 vs. TrEMBL
Match: A0A067JYY4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19108 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.7e-49
Identity = 103/157 (65.61%), Postives = 128/157 (81.53%), Query Frame = 1


Query: 13  SPPSSTTAILDSPLNAVGFEIEILSPHRVSGRIVVSPKCCQPFKVLHGGVSAMIAEALAS 72
           S  SS T  LD+PL+A+GFEIE LSPH+V+GR++V+ KC QPFKVLHGGVSA+I+EALAS
Sbjct: 4   SSSSSNTGKLDAPLDAIGFEIEELSPHKVTGRLLVTHKCVQPFKVLHGGVSALISEALAS 63

Query: 73  IGAQMAAGFKRVAGFHLSIDHLQSAEIGDLVLAEATPLSLGKAIQVWEVELWKAK--SSS 132
           +GA MA+GF+RVAG HLSI HL+ AE+GDL+LAEA+PL+LGK IQVWEV+LWK       
Sbjct: 64  MGAHMASGFQRVAGIHLSISHLKRAELGDLILAEASPLNLGKTIQVWEVQLWKVDPCDRG 123

Query: 133 VERRDLVASSRVTLLCNMPVPKHAQPLVDTLKRLAKL 168
            + + LV+SSRVTLLCNM VP+HA+   D LK+ AKL
Sbjct: 124 SKCKSLVSSSRVTLLCNMRVPEHAKDAADNLKKYAKL 160

[Close]

BLAST of Cp4.1LG03g12200 vs. TAIR10
Match: AT1G48320.1 (AT1G48320.1 Thioesterase superfamily protein)

HSP 1 Score: 196.1 bits (497), Expect = 1.8e-50
Identity = 94/152 (61.84%), Postives = 121/152 (79.61%), Query Frame = 1


Query: 16  SSTTAILDSPLNAVGFEIEILSPHRVSGRIVVSPKCCQPFKVLHGGVSAMIAEALASIGA 75
           SS T  +D PL+ +GFE + LSP R++GR+ VSP CCQPFKVLHGGVSA+IAE+LAS+GA
Sbjct: 5   SSNTKAIDPPLHMLGFEFDELSPTRITGRLPVSPVCCQPFKVLHGGVSALIAESLASMGA 64

Query: 76  QMAAGFKRVAGFHLSIDHLQSAEIGDLVLAEATPLSLGKAIQVWEVELWKAKSSSVERRD 135
            MA+GFKRVAG  LSI+HL+SA++GDLV AEATP+S GK IQVWEV+LWK        + 
Sbjct: 65  HMASGFKRVAGIQLSINHLKSADLGDLVFAEATPVSTGKTIQVWEVKLWKTTQKDKANKI 124

Query: 136 LVASSRVTLLCNMPVPKHAQPLVDTLKRLAKL 168
           L++SSRVTL+CN+P+P +A+   + LK +AKL
Sbjct: 125 LISSSRVTLICNLPIPDNAKDAANMLKMVAKL 156

[Close]

BLAST of Cp4.1LG03g12200 vs. TAIR10
Match: AT5G48950.1 (AT5G48950.1 Thioesterase superfamily protein)

HSP 1 Score: 174.9 bits (442), Expect = 4.2e-44
Identity = 85/151 (56.29%), Postives = 113/151 (74.83%), Query Frame = 1


Query: 15  PSSTTAILDSPLNAVGFEIEILSPHRVSGRIVVSPKCCQPFKVLHGGVSAMIAEALASIG 74
           P S   I+D PL  +GF  + LS  RVSG + ++ KCCQPFKVLHGGVSA+IAEALAS+G
Sbjct: 3   PKSPEFIIDQPLKILGFVFDELSATRVSGHLTLTEKCCQPFKVLHGGVSALIAEALASLG 62

Query: 75  AQMAAGFKRVAGFHLSIDHLQSAEIGDLVLAEATPLSLGKAIQVWEVELWKAKSSSV-ER 134
           A +A+GFKRVAG HLSI HL+ A +G++V AE+ P+S+GK IQVWEV LWKAK +   + 
Sbjct: 63  AGIASGFKRVAGIHLSIHHLRPAALGEIVFAESFPVSVGKNIQVWEVRLWKAKKTETPDN 122

Query: 135 RDLVASSRVTLLCNMPVPKHAQPLVDTLKRL 165
           + +V++SRVTL C +P+P H +   D LK++
Sbjct: 123 KIMVSTSRVTLFCGLPIPDHVKDAPDELKKV 153

[Close]

BLAST of Cp4.1LG03g12200 vs. NCBI nr
Match: gi|659077073|ref|XP_008439018.1| (PREDICTED: uncharacterized protein LOC103483936 isoform X1 [Cucumis melo])

HSP 1 Score: 284.3 bits (726), Expect = 1.4e-73
Identity = 146/170 (85.88%), Postives = 161/170 (94.71%), Query Frame = 1


Query: 1   MDHQNP-NDPPLPSPPSS--TTAILDSPLNAVGFEIEILSPHRVSGRIVVSPKCCQPFKV 60
           MD+QNP NDPPLPSP SS  TTAILD+PLNA+GFEIE LSP+RVSGRIVVSPKCCQ FKV
Sbjct: 1   MDNQNPHNDPPLPSPSSSSTTTAILDAPLNAMGFEIETLSPNRVSGRIVVSPKCCQMFKV 60

Query: 61  LHGGVSAMIAEALASIGAQMAAGFKRVAGFHLSIDHLQSAEIGDLVLAEATPLSLGKAIQ 120
           +HGGVSAMIAEALAS+GAQMA+GFKRVAGFHLSIDHLQSA++G+LVLAEA PLS+G AIQ
Sbjct: 61  MHGGVSAMIAEALASVGAQMASGFKRVAGFHLSIDHLQSAKMGELVLAEAVPLSIGDAIQ 120

Query: 121 VWEVELWKAKSSSVERRDLVASSRVTLLCNMPVPKHAQPLVDTLKRLAKL 168
           VWEVELWKAKSSS+ERRD+VASSRVTLLCNMPVPKH+QPLVDTL+R AKL
Sbjct: 121 VWEVELWKAKSSSIERRDVVASSRVTLLCNMPVPKHSQPLVDTLQRFAKL 170

[Close]

BLAST of Cp4.1LG03g12200 vs. NCBI nr
Match: gi|449459810|ref|XP_004147639.1| (PREDICTED: 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like isoform X1 [Cucumis sativus])

HSP 1 Score: 282.3 bits (721), Expect = 5.4e-73
Identity = 145/171 (84.80%), Postives = 161/171 (94.15%), Query Frame = 1


Query: 1   MDHQNP-NDPP---LPSPPSSTTAILDSPLNAVGFEIEILSPHRVSGRIVVSPKCCQPFK 60
           MD+QNP NDPP   LPSP SSTT+ILD+PLNAVGFEIEI+SP+RVSGRIVVSPKCCQ FK
Sbjct: 1   MDNQNPQNDPPLPSLPSPSSSTTSILDAPLNAVGFEIEIISPNRVSGRIVVSPKCCQVFK 60

Query: 61  VLHGGVSAMIAEALASIGAQMAAGFKRVAGFHLSIDHLQSAEIGDLVLAEATPLSLGKAI 120
           V+HGGVSAMIAEALAS+GAQ+A+GFKRVAGFHLSIDHLQSA++G+LVLAEA PLS+G AI
Sbjct: 61  VMHGGVSAMIAEALASLGAQIASGFKRVAGFHLSIDHLQSAKMGELVLAEAIPLSVGDAI 120

Query: 121 QVWEVELWKAKSSSVERRDLVASSRVTLLCNMPVPKHAQPLVDTLKRLAKL 168
           QVWEVELWKAKSSS+ERRDLVASSRVTLLCNMP+PKH+QPLVDTLK  AKL
Sbjct: 121 QVWEVELWKAKSSSIERRDLVASSRVTLLCNMPIPKHSQPLVDTLKTFAKL 171

[Close]

BLAST of Cp4.1LG03g12200 vs. NCBI nr
Match: gi|659077075|ref|XP_008439019.1| (PREDICTED: uncharacterized protein LOC103483936 isoform X2 [Cucumis melo])

HSP 1 Score: 248.8 bits (634), Expect = 6.6e-63
Identity = 133/170 (78.24%), Postives = 149/170 (87.65%), Query Frame = 1


Query: 1   MDHQNP-NDPPLPSPPSS--TTAILDSPLNAVGFEIEILSPHRVSGRIVVSPKCCQPFKV 60
           MD+QNP NDPPLPSP SS  TTAILD+PLNA+GFEIE LSP+R+             FKV
Sbjct: 1   MDNQNPHNDPPLPSPSSSSTTTAILDAPLNAMGFEIETLSPNRM-------------FKV 60

Query: 61  LHGGVSAMIAEALASIGAQMAAGFKRVAGFHLSIDHLQSAEIGDLVLAEATPLSLGKAIQ 120
           +HGGVSAMIAEALAS+GAQMA+GFKRVAGFHLSIDHLQSA++G+LVLAEA PLS+G AIQ
Sbjct: 61  MHGGVSAMIAEALASVGAQMASGFKRVAGFHLSIDHLQSAKMGELVLAEAVPLSIGDAIQ 120

Query: 121 VWEVELWKAKSSSVERRDLVASSRVTLLCNMPVPKHAQPLVDTLKRLAKL 168
           VWEVELWKAKSSS+ERRD+VASSRVTLLCNMPVPKH+QPLVDTL+R AKL
Sbjct: 121 VWEVELWKAKSSSIERRDVVASSRVTLLCNMPVPKHSQPLVDTLQRFAKL 157

[Close]

BLAST of Cp4.1LG03g12200 vs. NCBI nr
Match: gi|778679201|ref|XP_011651103.1| (PREDICTED: 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like isoform X2 [Cucumis sativus])

HSP 1 Score: 248.1 bits (632), Expect = 1.1e-62
Identity = 133/171 (77.78%), Postives = 149/171 (87.13%), Query Frame = 1


Query: 1   MDHQNP-NDPPLPS---PPSSTTAILDSPLNAVGFEIEILSPHRVSGRIVVSPKCCQPFK 60
           MD+QNP NDPPLPS   P SSTT+ILD+PLNAVGFEIEI+SP+RV             FK
Sbjct: 1   MDNQNPQNDPPLPSLPSPSSSTTSILDAPLNAVGFEIEIISPNRV-------------FK 60

Query: 61  VLHGGVSAMIAEALASIGAQMAAGFKRVAGFHLSIDHLQSAEIGDLVLAEATPLSLGKAI 120
           V+HGGVSAMIAEALAS+GAQ+A+GFKRVAGFHLSIDHLQSA++G+LVLAEA PLS+G AI
Sbjct: 61  VMHGGVSAMIAEALASLGAQIASGFKRVAGFHLSIDHLQSAKMGELVLAEAIPLSVGDAI 120

Query: 121 QVWEVELWKAKSSSVERRDLVASSRVTLLCNMPVPKHAQPLVDTLKRLAKL 168
           QVWEVELWKAKSSS+ERRDLVASSRVTLLCNMP+PKH+QPLVDTLK  AKL
Sbjct: 121 QVWEVELWKAKSSSIERRDLVASSRVTLLCNMPIPKHSQPLVDTLKTFAKL 158

[Close]

BLAST of Cp4.1LG03g12200 vs. NCBI nr
Match: gi|1012122498|ref|XP_015962749.1| (PREDICTED: 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like [Arachis duranensis])

HSP 1 Score: 206.8 bits (525), Expect = 2.9e-50
Identity = 101/173 (58.38%), Postives = 136/173 (78.61%), Query Frame = 1


Query: 1   MDHQNPNDPPLPSPP------SSTTAILDSPLNAVGFEIEILSPHRVSGRIVVSPKCCQP 60
           M++Q+P  PP P PP      SS TA +D PL+ +GFE++ L+P RVSG + ++PKCCQP
Sbjct: 1   MENQSPPRPPPPPPPPSSSSSSSKTAEVDLPLHEIGFELQDLTPQRVSGHLKITPKCCQP 60

Query: 61  FKVLHGGVSAMIAEALASIGAQMAAGFKRVAGFHLSIDHLQSAEIGDLVLAEATPLSLGK 120
           FKVLHGGVSA+IAEALASIGA MA+G++RVAG  LSI+HL+ A++GDL+ AEATP+ +GK
Sbjct: 61  FKVLHGGVSALIAEALASIGAHMASGYQRVAGIQLSINHLKRADLGDLIFAEATPVVIGK 120

Query: 121 AIQVWEVELWKAKSSSVERRDLVASSRVTLLCNMPVPKHAQPLVDTLKRLAKL 168
            IQVWEV +WK   S++E+R +++SSRVTLLCNMPVP++ +     LK+ A+L
Sbjct: 121 TIQVWEVRIWKIDQSNLEKRTMISSSRVTLLCNMPVPENVKDAGKNLKKHARL 173

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g12200 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DNAT1_ARATH	3.2e-49	61.84	1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 OS=Arabidopsis thaliana GN=DHNAT1 P...	[more]
DNAT2_ARATH	7.5e-43	56.29	1,4-dihydroxy-2-naphthoyl-CoA thioesterase 2 OS=Arabidopsis thaliana GN=DHNAT2 P...	[more]
Y1161_HAEIN	1.3e-10	34.15	Putative esterase HI_1161 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 111...	[more]
MENI_ECOLI	2.7e-08	32.23	1,4-dihydroxy-2-naphthoyl-CoA hydrolase OS=Escherichia coli (strain K12) GN=menI...	[more]
Y3380_VIBCH	1.8e-07	32.41	Putative esterase VC_A0580 OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / E...	[more]

BLAST of Cp4.1LG03g12200 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5H6_CUCSA	3.7e-73	84.80	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171770 PE=4 SV=1	[more]
A0A0D3DJR9_BRAOL	5.8e-50	67.76	Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1	[more]
A0A061ERE5_THECC	5.8e-50	65.79	Thioesterase superfamily protein OS=Theobroma cacao GN=TCM_021511 PE=4 SV=1	[more]
M5WVS9_PRUPE	9.9e-50	61.73	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012406mg PE=4 SV=1	[more]
A0A067JYY4_JATCU	1.7e-49	65.61	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19108 PE=4 SV=1	[more]

BLAST of Cp4.1LG03g12200 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G48320.1	1.8e-50	61.84	Thioesterase superfamily protein	[more]
AT5G48950.1	4.2e-44	56.29	Thioesterase superfamily protein	[more]

BLAST of Cp4.1LG03g12200 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659077073\|ref\|XP_008439018.1\|	1.4e-73	85.88	PREDICTED: uncharacterized protein LOC103483936 isoform X1 [Cucumis melo]	[more]
gi\|449459810\|ref\|XP_004147639.1\|	5.4e-73	84.80	PREDICTED: 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like isoform X1 [Cucumis...	[more]
gi\|659077075\|ref\|XP_008439019.1\|	6.6e-63	78.24	PREDICTED: uncharacterized protein LOC103483936 isoform X2 [Cucumis melo]	[more]
gi\|778679201\|ref\|XP_011651103.1\|	1.1e-62	77.78	PREDICTED: 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like isoform X2 [Cucumis...	[more]
gi\|1012122498\|ref\|XP_015962749.1\|	2.9e-50	58.38	PREDICTED: 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1-like [Arachis duranensis...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006683	Thioestr_dom
IPR003736	PAAI_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0042372	phylloquinone biosynthetic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005777	peroxisome
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g12200.1	Cp4.1LG03g12200.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003736	Phenylacetic acid degradation-related domain	TIGRFAMs	TIGR00369	TIGR00369	coord: 27..127 score: 4.8
IPR006683	Thioesterase domain	PFAM	PF03061	4HBT	coord: 56..129 score: 1.2
None	No IPR available	PANTHER	PTHR12418	FAMILY NOT NAMED	coord: 22..159 score: 1.4
None	No IPR available	PANTHER	PTHR12418:SF33	1,4-DIHYDROXY-2-NAPHTHOYL-COA THIOESTERASE 1	coord: 22..159 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG03g12200	Cucsa.252060	Cucumber (Gy14) v1	cgycpeB0682
Cp4.1LG03g12200	CmaCh14G015480	Cucurbita maxima (Rimu)	cmacpeB283
Cp4.1LG03g12200	CmoCh14G015840	Cucurbita moschata (Rifu)	cmocpeB245
Cp4.1LG03g12200	Cla021839	Watermelon (97103) v1	cpewmB613
Cp4.1LG03g12200	Csa3G171760	Cucumber (Chinese Long) v2	cpecuB609
Cp4.1LG03g12200	MELO3C006763	Melon (DHL92) v3.5.1	cpemeB585
Cp4.1LG03g12200	ClCG05G006960	Watermelon (Charleston Gray)	cpewcgB559
Cp4.1LG03g12200	CSPI03G15480	Wild cucumber (PI 183967)	cpecpiB611
Cp4.1LG03g12200	Lsi05G013750	Bottle gourd (USVL1VR-Ls)	cpelsiB507
Cp4.1LG03g12200	MELO3C006763.2	Melon (DHL92) v3.6.1	cpemedB693
Cp4.1LG03g12200	CsaV3_3G015650	Cucumber (Chinese Long) v3	cpecucB0759
Cp4.1LG03g12200	Bhi01G000834	Wax gourd	cpewgoB0783
Cp4.1LG03g12200	CsGy3G015540	Cucumber (Gy14) v2	cgybcpeB406
Cp4.1LG03g12200	Carg19587	Silver-seed gourd	carcpeB0395

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG03g12200	Cucurbita moschata (Rifu)	cmocpeB787
Cp4.1LG03g12200	Bottle gourd (USVL1VR-Ls)	cpelsiB490
Cp4.1LG03g12200	Watermelon (Charleston Gray)	cpewcgB554
Cp4.1LG03g12200	Watermelon (97103) v1	cpewmB619
Cp4.1LG03g12200	Melon (DHL92) v3.6.1	cpemedB701
Cp4.1LG03g12200	Cucurbita pepo (Zucchini)	cpecpeB482
Cp4.1LG03g12200	Cucurbita maxima (Rimu)	cmacpeB837