Csa3G133250 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa3G133250
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Self-incompatibility S1 family protein; contains IPR010264 (Plant self-incompatibility S1)
Location	Chr3 : 8747224 .. 8750136 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTAATGAATCATACCGATTGGTTCGTGCTACAGTGGTGAGTCCGAGAAGTAGTTTGCCCCACAGCCTTTCTTTGGTGCCAACTAGGGCTTTACAAAGACTTCTTGCCACTCATCTCGGTAATCTTCTTTCCTAAAACTGACGTTTGTTCATTATTGTTAGGGAAAAGTTAGTATAGAACTTCTTTTATTGTTCGTCGTAAGAAAAACTGTTTAAGACACACGGATCAAAATATGATATCCTCAAATCAGCAATATTTATTACTGTAATACTAGAAATCTCCCCATTAATGTTTGTTAGAAATCATTCCTCTTTTTAAAATCACTCAAACTTTCAATGATAATTATTTCTGTATTGAAACCATTGATGGGATTTGGCTTTATGGTCCATTTAGGCACTAGAATTAGTATAAGTCGAGTCGACTGTAGCAAAATTTCAGAGAAAGTAGAAACAAATGATAGGATTTCTCGAACGTGTTACATTGCCAATGAACAGAAACTGAGGCGTCAATATAGTATAACGTTTAGGCGACTGATATTATTCGAATATGGAAGAATTAGAACCGTCATTTTTACCATAGTATTATTGAACGCATATTAACGACTGATGCCACTATAGGACCATGACAGACACCATTTTGTTCGTAGAGTGGATAAGGCACTATCTCTCTCTCTCTCTCTCTCTCTCTCTTCTTTTTCCTTTTTAAAATTTATATATTTAGGGTATAATATCAGATCCTCTCTTCACCTTAACTTTTCGTTACGTAGGATGAAGATTTGAGTTTATCTCGGACTGTGCCATAAGTTGATCGATATCAAGTATATCGTAATGGTCGATATTGATAATTGGGATAGCGATAGGAGGGGGGAGTGAAGTTGAGAGATCTAATCAGTGTCCCTACGAGGTAGAAACCTTGTTTACGAAAGGATGTAGAAGTGAGTTTTACATTGCCCAACTCTGCAAATGGTAAAAAGACTGGCGTTCTATGAACAGTGGTCAATAACTGTCTACCTAATCCCCACTTAACATCGGTATTTATTTATTTATTTCGAAAAAAAGAAACAATCTGGAGTAAAAGTAAACTATGTAGTATGCAAAATGAAATGAATGATGATGATTTAGACTTTTGCCTTTCGCCTTTGACCGCAGCTTTCCCACTTCAAAAGGCCATCGGAGCTCTTGAAGATTTTCGAAGGAGATACTTTCTGTGGACTAACAGGTATTTGTGAAATCGTTGGGTCATTATGTTCATGCGTGGGTATAGTCGATGTATTCTTGATCATCTTGAATATATTGTTGTCCTGGGATCCAAAGGATAGCACTGGAGTAATATATTCTTATGCAGGGATTTTAAATAAAACGACTTTTCCTTTTCCTTTATTTAAGTGAGATAAAAAGGAATATTGAAATTATAATTTTGTAGATAATTCACTATTATGATCTTTTTTTAGTTTTTGATTTATAAAACTAATTTTGTTAGCTAACATGTCTGAGTGTATCTAAATTTTCACTTTTTGAAAAATCTAAGTATTTTGAAAATGAGTTATTTTAATTTTTCTATTATTATAATAATTATTATTATATTTGTGTCTTCCAATCTCAGGAACAATTGTTTGACTGCTACATTTGATAAGAAAACAATTAAGACGTTGAAAGGTAGGTAGAAGTTTTATCCCCCCTTCCTTGTTATCTTCATGGTCCTTGTTTACTAGTGTGTCTAACCCACAGTGATAATTTAGTATAAAATTTTCATGACTTGAATTTTAAGAACTATTTCAATTGCAGTTTACAGGATAATCAGAAAGAAAATCATTACCAAAGAGCTTCTAACCAATTATATTTAACTCTGTTAATTCGAAGTGTTTACATGAGCACTAACGCTTTCCGATGATTATAGGGCATTTGTTTGAATTGAAATTTTAATTGTAAAGTACTTTCGGAACTATTGGCGTCGCTATTATACAAAGCTTTCACATCGCATATTTTAATTCCACGGTGTGATAATTAATTACACTGCCATTTTCTTCAGGGGCTAACTTGAATGTGTCATTAAGATTTTCATCATTTTCCTAAAGAAAGTTCTGAAAAATCACGCGCCGCGTCTCTGCTAGTGGGTGTGCATCTACATTTCTCTTCCAGATGTTCAATATATAGAACATGTGTCAAATTAATGGAGGAGCATATAATTCTCTCTTGATATGTTATACGAGAATATCTAGAAAGGAAAAGCACACTTACGGTTCTTCTACCTAAATTTTTCACAACCATTTCTCTTAGTACCATCTACTACACATTTAGCACATAAAAATGAACAGTGAAAGTGCATTTCACTGAAGTAGTACGTCCTCATCATTGAGAACGTAAAAAGTCTAGAATTACCGTTCTTAGAAAAAAGAAGCTAGCTTCGAGACCATATAAAGCTTGAGCAACACTGCCATCATTTACACCAGAAAATTTGAGTTTCCATTGTTTCATGATCATGAAGATTCTCGTTAGCATTCTGATGCTCATTTTCTTCCCATTCTTCACTGTTTTCGTGTCACTGTTACCTGCAGAGCAACTGTTTGGCATAGAATACGAAGTCCGTGTGATCAATGGCTTCACAAACAACTCCTCACTTCCTCTAGTGATATGGTGCGCTTCCAAAGACGGTGATATTGGCGGGCGTGCGCTCCAGGAGCATGATGATTTCAGTTGGCCTGTCAAGACCAACTTCTGGATTACTACAACAACCTCTCAATTCTCATGCACTGTCAAATTGGACCGTACAAGGAAAAGTTTTGATGCATTCAAGGTACCAAGAGATATCTATCGCTGTAGTGCTCTCAGGAAATGCTCGTGGTTGGTTATGGAAGATGGGTTTTATTTCAGCGATGATGAAGTAAACTGGAAGAAGGATTTCTCGTGGTAA

mRNA sequence

ATGACTAATGAATCATACCGATTGGTTCGTGCTACAGTGGTGAGTCCGAGAAGTAGTTTGCCCCACAGCCTTTCTTTGGTGCCAACTAGGGCTTTACAAAGACTTCTTGCCACTCATCTCGCTTTCCCACTTCAAAAGGCCATCGGAGCTCTTGAAGATTTTCGAAGGAGATACTTTCTGTGGACTAACAGGAACAATTGTTTGACTGCTACATTTGATAAGAAAACAATTAAGACGTTGAAAGAGCAACTGTTTGGCATAGAATACGAAGTCCGTGTGATCAATGGCTTCACAAACAACTCCTCACTTCCTCTAGTGATATGGTGCGCTTCCAAAGACGGTGATATTGGCGGGCGTGCGCTCCAGGAGCATGATGATTTCAGTTGGCCTGTCAAGACCAACTTCTGGATTACTACAACAACCTCTCAATTCTCATGCACTGTCAAATTGGACCGTACAAGGAAAAGTTTTGATGCATTCAAGGTACCAAGAGATATCTATCGCTGTAGTGCTCTCAGGAAATGCTCGTGGTTGGTTATGGAAGATGGGTTTTATTTCAGCGATGATGAAGTAAACTGGAAGAAGGATTTCTCGTGGTAA

Coding sequence (CDS)

ATGACTAATGAATCATACCGATTGGTTCGTGCTACAGTGGTGAGTCCGAGAAGTAGTTTGCCCCACAGCCTTTCTTTGGTGCCAACTAGGGCTTTACAAAGACTTCTTGCCACTCATCTCGCTTTCCCACTTCAAAAGGCCATCGGAGCTCTTGAAGATTTTCGAAGGAGATACTTTCTGTGGACTAACAGGAACAATTGTTTGACTGCTACATTTGATAAGAAAACAATTAAGACGTTGAAAGAGCAACTGTTTGGCATAGAATACGAAGTCCGTGTGATCAATGGCTTCACAAACAACTCCTCACTTCCTCTAGTGATATGGTGCGCTTCCAAAGACGGTGATATTGGCGGGCGTGCGCTCCAGGAGCATGATGATTTCAGTTGGCCTGTCAAGACCAACTTCTGGATTACTACAACAACCTCTCAATTCTCATGCACTGTCAAATTGGACCGTACAAGGAAAAGTTTTGATGCATTCAAGGTACCAAGAGATATCTATCGCTGTAGTGCTCTCAGGAAATGCTCGTGGTTGGTTATGGAAGATGGGTTTTATTTCAGCGATGATGAAGTAAACTGGAAGAAGGATTTCTCGTGGTAA

Protein sequence

MTNESYRLVRATVVSPRSSLPHSLSLVPTRALQRLLATHLAFPLQKAIGALEDFRRRYFLWTNRNNCLTATFDKKTIKTLKEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW*

Homology

[Close]

BLAST of Csa3G133250 vs. TrEMBL
Match: A0A0A0L6V3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G133250 PE=4 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 5.8e-113
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 1


Query: 1   MTNESYRLVRATVVSPRSSLPHSLSLVPTRALQRLLATHLAFPLQKAIGALEDFRRRYFL 60
           MTNESYRLVRATVVSPRSSLPHSLSLVPTRALQRLLATHLAFPLQKAIGALEDFRRRYFL
Sbjct: 1   MTNESYRLVRATVVSPRSSLPHSLSLVPTRALQRLLATHLAFPLQKAIGALEDFRRRYFL 60

Query: 61  WTNRNNCLTATFDKKTIKTLKEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRA 120
           WTNRNNCLTATFDKKTIKTLKEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRA
Sbjct: 61  WTNRNNCLTATFDKKTIKTLKEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRA 120

Query: 121 LQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVM 180
           LQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVM
Sbjct: 121 LQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVM 180

Query: 181 EDGFYFSDDEVNWKKDFSW 200
           EDGFYFSDDEVNWKKDFSW
Sbjct: 181 EDGFYFSDDEVNWKKDFSW 199

[Close]

BLAST of Csa3G133250 vs. TrEMBL
Match: M5XJ42_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024197mg PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 9.4e-47
Identity = 85/118 (72.03%), Postives = 98/118 (83.05%), Query Frame = 1


Query: 82  EQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTT 141
           +  +GIEY++RVINGFTNNSSLPLVIWCAS+  D+GGRALQEHDDFSW ++TNFW   T 
Sbjct: 26  QNFYGIEYDIRVINGFTNNSSLPLVIWCASEHSDLGGRALQEHDDFSWSLRTNFW--GTN 85

Query: 142 SQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW 200
             F CT+K DRTR+SF+AFK PRD  RC   RKCSWLV EDGFYFS+DEVNW+KDFSW
Sbjct: 86  DHFKCTMKWDRTRRSFEAFKAPRDTQRCGPFRKCSWLVREDGFYFSNDEVNWRKDFSW 141

[Close]

BLAST of Csa3G133250 vs. TrEMBL
Match: B9H006_POPTR (Self-incompatibility family protein OS=Populus trichocarpa GN=POPTR_0003s17380g PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.5e-44
Identity = 85/118 (72.03%), Postives = 96/118 (81.36%), Query Frame = 1


Query: 82  EQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTT 141
           E  +G+EY+VRVINGF NNSSLPLVIWC+S + D+GGRALQE DDFSW +KTNFW TT  
Sbjct: 26  EYFYGLEYDVRVINGFKNNSSLPLVIWCSSNNDDLGGRALQEGDDFSWSLKTNFWGTT-- 85

Query: 142 SQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW 200
             F CT+K D  R+ FDAFKVPRD+ RCS  RKCSW V EDGFYFS+DEVNWKKDFSW
Sbjct: 86  -HFLCTMKWDAMRRKFDAFKVPRDLQRCSLFRKCSWSVREDGFYFSNDEVNWKKDFSW 140

[Close]

BLAST of Csa3G133250 vs. TrEMBL
Match: A0A0A0LNI8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G153590 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.0e-44
Identity = 83/116 (71.55%), Postives = 94/116 (81.03%), Query Frame = 1


Query: 84  LFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQ 143
           L G+ +EVRVINGF NNSSLPLVIWC+SK+ D+GGRALQEHDDFSW V T  W    ++Q
Sbjct: 11  LHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTTKLW---KSNQ 70

Query: 144 FSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW 200
           FSCT+K D  R+SFDAFKVPRD YRC   +KCSWLV EDGFYFS DE+NWKKDF W
Sbjct: 71  FSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKDFQW 123

[Close]

BLAST of Csa3G133250 vs. TrEMBL
Match: A0A061ESX1_THECC (Plant self-incompatibility protein S1 family OS=Theobroma cacao GN=TCM_020411 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.7e-43
Identity = 86/119 (72.27%), Postives = 96/119 (80.67%), Query Frame = 1


Query: 82  EQLFGIEYEVRVINGFTNNSSLPLVIWCASK-DGDIGGRALQEHDDFSWPVKTNFWITTT 141
           E  FG+EYEVRVINGF+NNSSLPLVIWC S+ DGD+GGRALQE DDF W +KTN W    
Sbjct: 53  EHFFGMEYEVRVINGFSNNSSLPLVIWCISQQDGDMGGRALQEGDDFGWRLKTNIW---G 112

Query: 142 TSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW 200
            S + CT+K D  R+SFDAFKVPRD  RC+ L+KCSWLV EDGFYFS DEVNWKKDFSW
Sbjct: 113 NSHYLCTLKWDAKRRSFDAFKVPRDSQRCAPLKKCSWLVKEDGFYFSSDEVNWKKDFSW 168

[Close]

BLAST of Csa3G133250 vs. TAIR10
Match: AT3G24060.1 (AT3G24060.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 155.2 bits (391), Expect = 4.2e-38
Identity = 70/114 (61.40%), Postives = 82/114 (71.93%), Query Frame = 1


Query: 86  GIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTTSQFS 145
           G E++VRVIN F +NSSLPLVIWC S  GD+GGRALQE DDF W  K + W  +  ++++
Sbjct: 35  GEEFDVRVINSFRDNSSLPLVIWCTSPQGDLGGRALQEGDDFEWTAKIDLW--SWMAEYT 94

Query: 146 CTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW 200
           CT+K D  RK F+AFKV RD  RC + +KCSW V EDGFYFS DEV W KDFSW
Sbjct: 95  CTMKWDSKRKQFEAFKVSRDSNRCGSTKKCSWSVREDGFYFSSDEVYWTKDFSW 146

[Close]

BLAST of Csa3G133250 vs. NCBI nr
Match: gi|700201641|gb|KGN56774.1| (hypothetical protein Csa_3G133250 [Cucumis sativus])

HSP 1 Score: 414.8 bits (1065), Expect = 8.3e-113
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 1


Query: 1   MTNESYRLVRATVVSPRSSLPHSLSLVPTRALQRLLATHLAFPLQKAIGALEDFRRRYFL 60
           MTNESYRLVRATVVSPRSSLPHSLSLVPTRALQRLLATHLAFPLQKAIGALEDFRRRYFL
Sbjct: 1   MTNESYRLVRATVVSPRSSLPHSLSLVPTRALQRLLATHLAFPLQKAIGALEDFRRRYFL 60

Query: 61  WTNRNNCLTATFDKKTIKTLKEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRA 120
           WTNRNNCLTATFDKKTIKTLKEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRA
Sbjct: 61  WTNRNNCLTATFDKKTIKTLKEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRA 120

Query: 121 LQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVM 180
           LQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVM
Sbjct: 121 LQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVM 180

Query: 181 EDGFYFSDDEVNWKKDFSW 200
           EDGFYFSDDEVNWKKDFSW
Sbjct: 181 EDGFYFSDDEVNWKKDFSW 199

[Close]

BLAST of Csa3G133250 vs. NCBI nr
Match: gi|659075914|ref|XP_008438399.1| (PREDICTED: uncharacterized protein LOC103483510 isoform X2 [Cucumis melo])

HSP 1 Score: 260.4 bits (664), Expect = 2.6e-66
Identity = 122/132 (92.42%), Postives = 124/132 (93.94%), Query Frame = 1


Query: 68  LTATFDKKTIKTLKEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDF 127
           L+  F+  T   L EQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDF
Sbjct: 23  LSRIFEGDTFCGLTEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDF 82

Query: 128 SWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFS 187
           SWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFS
Sbjct: 83  SWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFS 142

Query: 188 DDEVNWKKDFSW 200
           DDEVNWKKDFSW
Sbjct: 143 DDEVNWKKDFSW 154

[Close]

BLAST of Csa3G133250 vs. NCBI nr
Match: gi|659075914|ref|XP_008438399.1| (PREDICTED: uncharacterized protein LOC103483510 isoform X2 [Cucumis melo])

HSP 1 Score: 30.8 bits (68), Expect = 3.4e+03
Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 1


Query: 1  MTNESYRLVRATVVS 16
          MTNESYRLVRATV+S
Sbjct: 1  MTNESYRLVRATVLS 15

HSP 2 Score: 256.1 bits (653), Expect = 4.9e-65
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 1


Query: 82  EQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTT 141
           EQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTT
Sbjct: 28  EQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTT 87

Query: 142 SQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW 200
           SQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Sbjct: 88  SQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW 145

[Close]

BLAST of Csa3G133250 vs. NCBI nr
Match: gi|659075912|ref|XP_008438398.1| (PREDICTED: uncharacterized protein LOC103483510 isoform X1 [Cucumis melo])

HSP 1 Score: 256.1 bits (653), Expect = 4.9e-65
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 1


Query: 82  EQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTT 141
           EQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTT
Sbjct: 41  EQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTT 100

Query: 142 SQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW 200
           SQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Sbjct: 101 SQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW 158

[Close]

BLAST of Csa3G133250 vs. NCBI nr
Match: gi|659075912|ref|XP_008438398.1| (PREDICTED: uncharacterized protein LOC103483510 isoform X1 [Cucumis melo])

HSP 1 Score: 70.5 bits (171), Expect = 3.8e-09
Identity = 35/40 (87.50%), Postives = 36/40 (90.00%), Query Frame = 1


Query: 1  MTNESYRLVRATVVSPRSSLPHSLSLVPTRALQRLLATHL 41
          MTNESYRLVRATVVSPRSSLPHSLSL PTR L+ L ATHL
Sbjct: 1  MTNESYRLVRATVVSPRSSLPHSLSLAPTRGLEILFATHL 40

HSP 2 Score: 194.9 bits (494), Expect = 1.3e-46
Identity = 85/118 (72.03%), Postives = 98/118 (83.05%), Query Frame = 1


Query: 82  EQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTT 141
           +  +GIEY++RVINGFTNNSSLPLVIWCAS+  D+GGRALQEHDDFSW ++TNFW   T 
Sbjct: 26  QNFYGIEYDIRVINGFTNNSSLPLVIWCASEHSDLGGRALQEHDDFSWSLRTNFW--GTN 85

Query: 142 SQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW 200
             F CT+K DRTR+SF+AFK PRD  RC   RKCSWLV EDGFYFS+DEVNW+KDFSW
Sbjct: 86  DHFKCTMKWDRTRRSFEAFKAPRDTQRCGPFRKCSWLVREDGFYFSNDEVNWRKDFSW 141

The following BLAST results are available for this feature:

BLAST of Csa3G133250 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6V3_CUCSA	5.8e-113	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G133250 PE=4 SV=1	[more]
M5XJ42_PRUPE	9.4e-47	72.03	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024197mg PE=4 SV=1	[more]
B9H006_POPTR	1.5e-44	72.03	Self-incompatibility family protein OS=Populus trichocarpa GN=POPTR_0003s17380g ...	[more]
A0A0A0LNI8_CUCSA	2.0e-44	71.55	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G153590 PE=4 SV=1	[more]
A0A061ESX1_THECC	1.7e-43	72.27	Plant self-incompatibility protein S1 family OS=Theobroma cacao GN=TCM_020411 PE...	[more]

BLAST of Csa3G133250 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G24060.1	4.2e-38	61.40	Plant self-incompatibility protein S1 family	[more]

BLAST of Csa3G133250 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700201641\|gb\|KGN56774.1\|	8.3e-113	100.00	hypothetical protein Csa_3G133250 [Cucumis sativus]	[more]
gi\|659075914\|ref\|XP_008438399.1\|	2.6e-66	92.42	PREDICTED: uncharacterized protein LOC103483510 isoform X2 [Cucumis melo]	[more]
gi\|659075914\|ref\|XP_008438399.1\|	3.4e+03	93.33	PREDICTED: uncharacterized protein LOC103483510 isoform X2 [Cucumis melo]	[more]
gi\|659075912\|ref\|XP_008438398.1\|	4.9e-65	100.00	PREDICTED: uncharacterized protein LOC103483510 isoform X1 [Cucumis melo]	[more]
gi\|659075912\|ref\|XP_008438398.1\|	3.8e-09	87.50	PREDICTED: uncharacterized protein LOC103483510 isoform X1 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010264	Self-incomp_S1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa3G133250.1	Csa3G133250.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 91..199 score: 1.3
None	No IPR available	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 76..199 score: 1.0
None	No IPR available	PANTHER	PTHR31232:SF8	SUBFAMILY NOT NAMED	coord: 76..199 score: 1.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa3G133250	Cla002935	Watermelon (97103) v1	cuwmB279
Csa3G133250	Cla021451	Watermelon (97103) v1	cuwmB233
Csa3G133250	MELO3C006342	Melon (DHL92) v3.5.1	cumeB236
Csa3G133250	MELO3C023093	Melon (DHL92) v3.5.1	cumeB231
Csa3G133250	ClCG05G003630	Watermelon (Charleston Gray)	cuwcgB222
Csa3G133250	Lsi05G018050	Bottle gourd (USVL1VR-Ls)	culsiB209
Csa3G133250	Lsi09G011640	Bottle gourd (USVL1VR-Ls)	culsiB150
Csa3G133250	MELO3C023093.2	Melon (DHL92) v3.6.1	cumedB220
Csa3G133250	MELO3C006342.2	Melon (DHL92) v3.6.1	cumedB223
Csa3G133250	Cla97C06G117290	Watermelon (97103) v2	cuwmbB231
Csa3G133250	Cla97C05G084300	Watermelon (97103) v2	cuwmbB204
Csa3G133250	Bhi12G001333	Wax gourd	cuwgoB251
Csa3G133250	CSPI02G09590	Wild cucumber (PI 183967)	cpicuB069
Csa3G133250	CSPI03G11220	Wild cucumber (PI 183967)	cpicuB120
Csa3G133250	Cucsa.256140	Cucumber (Gy14) v1	cgycuB366
Csa3G133250	CmaCh14G018670	Cucurbita maxima (Rimu)	cmacuB253
Csa3G133250	CmaCh08G010370	Cucurbita maxima (Rimu)	cmacuB885
Csa3G133250	CmoCh08G010080	Cucurbita moschata (Rifu)	cmocuB872
Csa3G133250	CmoCh14G019130	Cucurbita moschata (Rifu)	cmocuB239
Csa3G133250	CsGy2G009730	Cucumber (Gy14) v2	cgybcuB065
Csa3G133250	Carg11012	Silver-seed gourd	carcuB1093
Csa3G133250	Carg16516	Silver-seed gourd	carcuB0262

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa3G133250	Melon (DHL92) v3.5.1	cumeB219
Csa3G133250	Watermelon (Charleston Gray)	cuwcgB246
Csa3G133250	Watermelon (Charleston Gray)	cuwcgB255
Csa3G133250	Watermelon (97103) v1	cuwmB223
Csa3G133250	Cucurbita pepo (Zucchini)	cpecuB134
Csa3G133250	Cucurbita pepo (Zucchini)	cpecuB310
Csa3G133250	Cucurbita pepo (Zucchini)	cpecuB609
Csa3G133250	Cucurbita pepo (Zucchini)	cpecuB724
Csa3G133250	Cucurbita pepo (Zucchini)	cpecuB859
Csa3G133250	Bottle gourd (USVL1VR-Ls)	culsiB215
Csa3G133250	Cucumber (Gy14) v2	cgybcuB109
Csa3G133250	Silver-seed gourd	carcuB0256
Csa3G133250	Silver-seed gourd	carcuB0975
Csa3G133250	Watermelon (97103) v2	cuwmbB241
Csa3G133250	Wax gourd	cuwgoB278
Csa3G133250	Wax gourd	cuwgoB303
Csa3G133250	Cucumber (Chinese Long) v2	cucuB050
Csa3G133250	Cucumber (Chinese Long) v2	cucuB090
Csa3G133250	Cucumber (Gy14) v1	cgycuB203
Csa3G133250	Cucurbita maxima (Rimu)	cmacuB356
Csa3G133250	Cucurbita maxima (Rimu)	cmacuB814
Csa3G133250	Cucurbita moschata (Rifu)	cmocuB346
Csa3G133250	Cucurbita moschata (Rifu)	cmocuB806