CmoCh14G019130 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCATGAAGATTCTCGTTAGCATTCTGATGCTCATTTTATTTCCATTCTTCACTGTTTTCATGTCATTGTTACCTCCAGAGCAACTGTATGGCATAGAATACGAAGTCCGTGTGATCAACGGCTTCACAAACAACTCCTCACTACCTCTGGTGATATGGTGCGCGTCCAAAGACTGTGATATCGGCGGGCGTGCGCTCCAGGAGCACGATGATTTCAGTTGGCCCGTCAGGACCAACTTCTGGATTACTACAACCTCTCAATTCTCATGCACTGTCAAGCTTGATCGTACAAGGAAGAGTTTTGACGCATTCAAGGTACCAAGAGATATATATCGCTGTAGTGCCCTCAGGAAATGCACTTGGTTGGTTTTAGAAGATGGGTTTTATTTCAGTGACGACGAAGTAAACTGGAAGAAGGATTTCTCGTGGTGA ATGATCATGAAGATTCTCGTTAGCATTCTGATGCTCATTTTATTTCCATTCTTCACTGTTTTCATGTCATTGTTACCTCCAGAGCAACTGTATGGCATAGAATACGAAGTCCGTGTGATCAACGGCTTCACAAACAACTCCTCACTACCTCTGGTGATATGGTGCGCGTCCAAAGACTGTGATATCGGCGGGCGTGCGCTCCAGGAGCACGATGATTTCAGTTGGCCCGTCAGGACCAACTTCTGGATTACTACAACCTCTCAATTCTCATGCACTGTCAAGCTTGATCGTACAAGGAAGAGTTTTGACGCATTCAAGGTACCAAGAGATATATATCGCTGTAGTGCCCTCAGGAAATGCACTTGGTTGGTTTTAGAAGATGGGTTTTATTTCAGTGACGACGAAGTAAACTGGAAGAAGGATTTCTCGTGGTGA ATGATCATGAAGATTCTCGTTAGCATTCTGATGCTCATTTTATTTCCATTCTTCACTGTTTTCATGTCATTGTTACCTCCAGAGCAACTGTATGGCATAGAATACGAAGTCCGTGTGATCAACGGCTTCACAAACAACTCCTCACTACCTCTGGTGATATGGTGCGCGTCCAAAGACTGTGATATCGGCGGGCGTGCGCTCCAGGAGCACGATGATTTCAGTTGGCCCGTCAGGACCAACTTCTGGATTACTACAACCTCTCAATTCTCATGCACTGTCAAGCTTGATCGTACAAGGAAGAGTTTTGACGCATTCAAGGTACCAAGAGATATATATCGCTGTAGTGCCCTCAGGAAATGCACTTGGTTGGTTTTAGAAGATGGGTTTTATTTCAGTGACGACGAAGTAAACTGGAAGAAGGATTTCTCGTGGTGA
BLAST of CmoCh14G019130 vs. TrEMBL
Match: A0A0A0L6V3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G133250 PE=4 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 2.6e-62 Identity = 112/118 (94.92%), Postives = 116/118 (98.31%), Query Frame = 1
BLAST of CmoCh14G019130 vs. TrEMBL
Match: M5XJ42_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024197mg PE=4 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 1.3e-53 Identity = 99/142 (69.72%), Postives = 115/142 (80.99%), Query Frame = 1
BLAST of CmoCh14G019130 vs. TrEMBL
Match: B9H006_POPTR (Self-incompatibility family protein OS=Populus trichocarpa GN=POPTR_0003s17380g PE=4 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 2.1e-48 Identity = 92/142 (64.79%), Postives = 110/142 (77.46%), Query Frame = 1
BLAST of CmoCh14G019130 vs. TrEMBL
Match: B9GMH5_POPTR (Self-incompatibility family protein OS=Populus trichocarpa GN=POPTR_0001s14170g PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 1.2e-46 Identity = 89/142 (62.68%), Postives = 108/142 (76.06%), Query Frame = 1
BLAST of CmoCh14G019130 vs. TrEMBL
Match: A0A0A0LNI8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G153590 PE=4 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 1.5e-46 Identity = 85/125 (68.00%), Postives = 101/125 (80.80%), Query Frame = 1
BLAST of CmoCh14G019130 vs. TAIR10
Match: AT3G24060.1 (AT3G24060.1 Plant self-incompatibility protein S1 family) HSP 1 Score: 157.1 bits (396), Expect = 7.9e-39 Identity = 74/141 (52.48%), Postives = 98/141 (69.50%), Query Frame = 1
BLAST of CmoCh14G019130 vs. NCBI nr
Match: gi|449432460|ref|XP_004134017.1| (PREDICTED: uncharacterized protein LOC101218823 [Cucumis sativus]) HSP 1 Score: 281.6 bits (719), Expect = 7.9e-73 Identity = 136/145 (93.79%), Postives = 141/145 (97.24%), Query Frame = 1
BLAST of CmoCh14G019130 vs. NCBI nr
Match: gi|700201641|gb|KGN56774.1| (hypothetical protein Csa_3G133250 [Cucumis sativus]) HSP 1 Score: 246.1 bits (627), Expect = 3.7e-62 Identity = 112/118 (94.92%), Postives = 116/118 (98.31%), Query Frame = 1
BLAST of CmoCh14G019130 vs. NCBI nr
Match: gi|659075914|ref|XP_008438399.1| (PREDICTED: uncharacterized protein LOC103483510 isoform X2 [Cucumis melo]) HSP 1 Score: 246.1 bits (627), Expect = 3.7e-62 Identity = 112/118 (94.92%), Postives = 116/118 (98.31%), Query Frame = 1
BLAST of CmoCh14G019130 vs. NCBI nr
Match: gi|659075912|ref|XP_008438398.1| (PREDICTED: uncharacterized protein LOC103483510 isoform X1 [Cucumis melo]) HSP 1 Score: 246.1 bits (627), Expect = 3.7e-62 Identity = 112/118 (94.92%), Postives = 116/118 (98.31%), Query Frame = 1
BLAST of CmoCh14G019130 vs. NCBI nr
Match: gi|596253311|ref|XP_007224750.1| (hypothetical protein PRUPE_ppa024197mg [Prunus persica]) HSP 1 Score: 217.2 bits (552), Expect = 1.8e-53 Identity = 99/142 (69.72%), Postives = 115/142 (80.99%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |