CmaCh08G010370 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh08G010370
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPlant self-incompatibility protein S1 family
LocationCma_Chr08 : 6503578 .. 6504012 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAGAAAATTCTGAACACCATTCTCCTCCTCCTCTTCGTCTCAGCATTCTCCTTCTTCATCTTCATCATCCAACCAGACAGACTATACCTACACGGGGTCGTCTACGAGGTTCGAGTCATCAATGGCTTCACCAACAATTCATCTTTGCCTTTGGTCATATGGTGTTCTTCAAAAGACAGCGATTTGGGTGGGAGGGCGTTGCAAGAACACGATGATTTCAGCTGGAGAGTCACAACCAAGCTGTGGAACACCAACCAATTCTGTTGTACCATGAAATGGGATGCCAAAAGGAAGTCTTTTGATGCGTTTAAGGTTCCAAGGGACTTCTACCGATGTGGGATTTTCAAGAAATGTTCTTGGTTGGTTAGGGAAGATGGCTTCTACTTTAGCCCTGATGAGGTTAATTGGAAGAAGGATTTTCAGTGGTGA

mRNA sequence

ATGAAGAAGAAAATTCTGAACACCATTCTCCTCCTCCTCTTCGTCTCAGCATTCTCCTTCTTCATCTTCATCATCCAACCAGACAGACTATACCTACACGGGGTCGTCTACGAGGTTCGAGTCATCAATGGCTTCACCAACAATTCATCTTTGCCTTTGGTCATATGGTGTTCTTCAAAAGACAGCGATTTGGGTGGGAGGGCGTTGCAAGAACACGATGATTTCAGCTGGAGAGTCACAACCAAGCTGTGGAACACCAACCAATTCTGTTGTACCATGAAATGGGATGCCAAAAGGAAGTCTTTTGATGCGTTTAAGGTTCCAAGGGACTTCTACCGATGTGGGATTTTCAAGAAATGTTCTTGGTTGGTTAGGGAAGATGGCTTCTACTTTAGCCCTGATGAGGTTAATTGGAAGAAGGATTTTCAGTGGTGA

Coding sequence (CDS)

ATGAAGAAGAAAATTCTGAACACCATTCTCCTCCTCCTCTTCGTCTCAGCATTCTCCTTCTTCATCTTCATCATCCAACCAGACAGACTATACCTACACGGGGTCGTCTACGAGGTTCGAGTCATCAATGGCTTCACCAACAATTCATCTTTGCCTTTGGTCATATGGTGTTCTTCAAAAGACAGCGATTTGGGTGGGAGGGCGTTGCAAGAACACGATGATTTCAGCTGGAGAGTCACAACCAAGCTGTGGAACACCAACCAATTCTGTTGTACCATGAAATGGGATGCCAAAAGGAAGTCTTTTGATGCGTTTAAGGTTCCAAGGGACTTCTACCGATGTGGGATTTTCAAGAAATGTTCTTGGTTGGTTAGGGAAGATGGCTTCTACTTTAGCCCTGATGAGGTTAATTGGAAGAAGGATTTTCAGTGGTGA

Protein sequence

MKKKILNTILLLLFVSAFSFFIFIIQPDRLYLHGVVYEVRVINGFTNNSSLPLVIWCSSKDSDLGGRALQEHDDFSWRVTTKLWNTNQFCCTMKWDAKRKSFDAFKVPRDFYRCGIFKKCSWLVREDGFYFSPDEVNWKKDFQW
Homology
[Close]
BLAST of CmaCh08G010370 vs. TrEMBL
Match: A0A0A0LNI8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G153590 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 3.0e-63
Identity = 109/123 (88.62%), Postives = 117/123 (95.12%), Query Frame = 1 

Query: 22  IFIIQPDRLYLHGVVYEVRVINGFTNNSSLPLVIWCSSKDSDLGGRALQEHDDFSWRVTT 81
           +FIIQPDRLYLHGVV+EVRVINGF NNSSLPLVIWCSSK++DLGGRALQEHDDFSW+VTT
Sbjct: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTT 60

Query: 82  KLWNTNQFCCTMKWDAKRKSFDAFKVPRDFYRCGIFKKCSWLVREDGFYFSPDEVNWKKD 141
           KLW +NQF CTMKWDAKR+SFDAFKVPRDFYRCG FKKCSWLV EDGFYFS DE+NWKKD
Sbjct: 61  KLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKD 120

Query: 142 FQW 145
           FQW
Sbjct: 121 FQW 123

[Close]
BLAST of CmaCh08G010370 vs. TrEMBL
Match: M5XJ42_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024197mg PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 5.9e-51
Identity = 96/142 (67.61%), Postives = 113/142 (79.58%), Query Frame = 1 

Query: 4   KILNTILLLLFVSAFSFFIFIIQPDRLYLHGVVYEVRVINGFTNNSSLPLVIWCSSKDSD 63
           KIL +ILL+  +++F  F+ I+QP   Y  G+ Y++RVINGFTNNSSLPLVIWC+S+ SD
Sbjct: 2   KILTSILLICGLASFVIFMSILQPQNFY--GIEYDIRVINGFTNNSSLPLVIWCASEHSD 61

Query: 64  LGGRALQEHDDFSWRVTTKLWNTNQ-FCCTMKWDAKRKSFDAFKVPRDFYRCGIFKKCSW 123
           LGGRALQEHDDFSW + T  W TN  F CTMKWD  R+SF+AFK PRD  RCG F+KCSW
Sbjct: 62  LGGRALQEHDDFSWSLRTNFWGTNDHFKCTMKWDRTRRSFEAFKAPRDTQRCGPFRKCSW 121

Query: 124 LVREDGFYFSPDEVNWKKDFQW 145
           LVREDGFYFS DEVNW+KDF W
Sbjct: 122 LVREDGFYFSNDEVNWRKDFSW 141

[Close]
BLAST of CmaCh08G010370 vs. TrEMBL
Match: V4SA14_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006174mg PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 4.2e-49
Identity = 91/141 (64.54%), Postives = 109/141 (77.30%), Query Frame = 1 

Query: 4   KILNTILLLLFVSAFSFFIFIIQPDRLYLHGVVYEVRVINGFTNNSSLPLVIWCSSKDSD 63
           K LN+ILL+  ++    F+ ++QP   Y  GV Y+VRVINGFTNNSSL LVIWCSS++ D
Sbjct: 2   KTLNSILLIFCLAIGIIFMSVLQPQHFY--GVEYDVRVINGFTNNSSLALVIWCSSEEGD 61

Query: 64  LGGRALQEHDDFSWRVTTKLWNTNQFCCTMKWDAKRKSFDAFKVPRDFYRCGIFKKCSWL 123
           +GGRALQ  DD+ WR+ TK+W T  F CTMKWD KR+ F AFKVPRD  RC +F+KCSWL
Sbjct: 62  MGGRALQAGDDYGWRLRTKIWGTTDFMCTMKWDQKRRRFHAFKVPRDSLRCNLFRKCSWL 121

Query: 124 VREDGFYFSPDEVNWKKDFQW 145
           V+EDGFYFS DEVNWKKDF W
Sbjct: 122 VKEDGFYFSNDEVNWKKDFSW 140

[Close]
BLAST of CmaCh08G010370 vs. TrEMBL
Match: A0A067EX92_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g046294mg PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 4.2e-49
Identity = 91/141 (64.54%), Postives = 109/141 (77.30%), Query Frame = 1 

Query: 4   KILNTILLLLFVSAFSFFIFIIQPDRLYLHGVVYEVRVINGFTNNSSLPLVIWCSSKDSD 63
           K LN+ILL+  ++    F+ ++QP   Y  GV Y+VRVINGFTNNSSL LVIWCSS++ D
Sbjct: 2   KTLNSILLIFCLAIGIIFMSVLQPQHFY--GVEYDVRVINGFTNNSSLALVIWCSSEEGD 61

Query: 64  LGGRALQEHDDFSWRVTTKLWNTNQFCCTMKWDAKRKSFDAFKVPRDFYRCGIFKKCSWL 123
           +GGRALQ  DD+ WR+ TK+W T  F CTMKWD KR+ F AFKVPRD  RC +F+KCSWL
Sbjct: 62  MGGRALQAGDDYGWRLRTKIWGTTDFMCTMKWDQKRRRFHAFKVPRDSLRCNLFRKCSWL 121

Query: 124 VREDGFYFSPDEVNWKKDFQW 145
           V+EDGFYFS DEVNWKKDF W
Sbjct: 122 VKEDGFYFSNDEVNWKKDFSW 140

[Close]
BLAST of CmaCh08G010370 vs. TrEMBL
Match: B9H006_POPTR (Self-incompatibility family protein OS=Populus trichocarpa GN=POPTR_0003s17380g PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 7.2e-49
Identity = 92/141 (65.25%), Postives = 106/141 (75.18%), Query Frame = 1 

Query: 4   KILNTILLLLFVSAFSFFIFIIQPDRLYLHGVVYEVRVINGFTNNSSLPLVIWCSSKDSD 63
           K+L  I L+  ++    F+ I QP+  Y +G+ Y+VRVINGF NNSSLPLVIWCSS + D
Sbjct: 2   KVLTNIFLVASLAIGIIFMSIYQPE--YFYGLEYDVRVINGFKNNSSLPLVIWCSSNNDD 61

Query: 64  LGGRALQEHDDFSWRVTTKLWNTNQFCCTMKWDAKRKSFDAFKVPRDFYRCGIFKKCSWL 123
           LGGRALQE DDFSW + T  W T  F CTMKWDA R+ FDAFKVPRD  RC +F+KCSW 
Sbjct: 62  LGGRALQEGDDFSWSLKTNFWGTTHFLCTMKWDAMRRKFDAFKVPRDLQRCSLFRKCSWS 121

Query: 124 VREDGFYFSPDEVNWKKDFQW 145
           VREDGFYFS DEVNWKKDF W
Sbjct: 122 VREDGFYFSNDEVNWKKDFSW 140

[Close]
BLAST of CmaCh08G010370 vs. TAIR10
Match: AT3G24060.1 (AT3G24060.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 173.3 bits (438), Expect = 1.1e-43
Identity = 82/144 (56.94%), Postives = 101/144 (70.14%), Query Frame = 1 

Query: 2   KKKILNTILLLLFVSAFSFFIFIIQPDRLYLHGVVYEVRVINGFTNNSSLPLVIWCSSKD 61
           +K I+  + +L+ +S    F  ++QP  ++L G  ++VRVIN F +NSSLPLVIWC+S  
Sbjct: 4   RKTIILLLFMLIAISLTIIFTLMLQPQTMFL-GEEFDVRVINSFRDNSSLPLVIWCTSPQ 63

Query: 62  SDLGGRALQEHDDFSWRVTTKLWN-TNQFCCTMKWDAKRKSFDAFKVPRDFYRCGIFKKC 121
            DLGGRALQE DDF W     LW+   ++ CTMKWD+KRK F+AFKV RD  RCG  KKC
Sbjct: 64  GDLGGRALQEGDDFEWTAKIDLWSWMAEYTCTMKWDSKRKQFEAFKVSRDSNRCGSTKKC 123

Query: 122 SWLVREDGFYFSPDEVNWKKDFQW 145
           SW VREDGFYFS DEV W KDF W
Sbjct: 124 SWSVREDGFYFSSDEVYWTKDFSW 146

[Close]
BLAST of CmaCh08G010370 vs. TAIR10
Match: AT1G04645.1 (AT1G04645.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 62.8 bits (151), Expect = 2.0e-10
Identity = 27/77 (35.06%), Postives = 40/77 (51.95%), Query Frame = 1 

Query: 52  PLVIWCSSKDSDLGGRALQEHDDFSWRVTTKLWNTNQFCCTMKWDAKRKSFDAFKVPRDF 111
           PL I C SK  DLG   +    ++ ++    LW +  F C+ +WD++ KSFD +   RD 
Sbjct: 41  PLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWDSQFKSFDIYDAQRD- 100

Query: 112 YRCGIFKKCSWLVREDG 129
              GI   C W ++ DG
Sbjct: 101 --QGICDDCQWEIKPDG 114

[Close]
BLAST of CmaCh08G010370 vs. TAIR10
Match: AT4G16195.1 (AT4G16195.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 52.0 bits (123), Expect = 3.6e-07
Identity = 26/83 (31.33%), Postives = 41/83 (49.40%), Query Frame = 1 

Query: 49  SSLPLVIWCSSKDSDLGGRALQEHDDFSWRVTTKLWNTNQFCCTMKWDAKRKSFDAFKVP 108
           + L L+  C SKD DLG R LQ  + +S+    + +    + C+  W  +  SFD +K  
Sbjct: 58  NQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNESHSFDIYKDH 117

Query: 109 RDF---YRCGIFKKCSWLVREDG 129
           RD     +C    +C W +R +G
Sbjct: 118 RDSGGDNKCE-SDRCVWKIRRNG 139

[Close]
BLAST of CmaCh08G010370 vs. TAIR10
Match: AT1G26797.1 (AT1G26797.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 50.8 bits (120), Expect = 8.0e-07
Identity = 23/79 (29.11%), Postives = 35/79 (44.30%), Query Frame = 1 

Query: 53  LVIWCSSKDSDLGGRALQEHDDFSWRVTTKLWNTNQFCCTMKWDAKRKSFDAFKVPRD-- 112
           L + C +K  DLG   ++  +   +R    L  T  + C   W    K+FD F+  RD  
Sbjct: 44  LYVHCRNKGEDLGLHKIEYREQIDFRFRVNLRRTTTYTCKFSWPGNEKTFDIFRADRDDS 103

Query: 113 -FYRCGIFKKCSWLVREDG 129
                GI ++C W + E G
Sbjct: 104 SKSTSGICRECIWYICETG 122

[Close]
BLAST of CmaCh08G010370 vs. TAIR10
Match: AT1G26796.1 (AT1G26796.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 50.4 bits (119), Expect = 1.0e-06
Identity = 23/77 (29.87%), Postives = 38/77 (49.35%), Query Frame = 1 

Query: 53  LVIWCSSKDSDLGGRALQEHDDFSWRVTTKLWNTNQFCCTMKWDAKRKSFDAFKVPRD-- 112
           L++ C +K  DLG  +LQ    F +R    L  T ++ C+ +W     +FD F+  RD  
Sbjct: 55  LIVHCRNKGDDLGVISLQHLARFHFRFRVNLRKTTKYTCSFEWPGNTATFDIFRADRDDN 114

Query: 113 -FYRCGIFKKCSWLVRE 127
              + G+  +C W + E
Sbjct: 115 PRSKYGVCSECIWSIYE 131

[Close]
BLAST of CmaCh08G010370 vs. NCBI nr
Match: gi|659121582|ref|XP_008460730.1| (PREDICTED: uncharacterized protein LOC103499491 [Cucumis melo])

HSP 1 Score: 275.0 bits (702), Expect = 7.4e-71
Identity = 124/143 (86.71%), Postives = 132/143 (92.31%), Query Frame = 1 

Query: 2   KKKILNTILLLLFVSAFSFFIFIIQPDRLYLHGVVYEVRVINGFTNNSSLPLVIWCSSKD 61
           KKK L TILLL   SAFSF +FI+QPDRLYLHGV++EVRVINGF NNSSLPLVIWCSSK+
Sbjct: 3   KKKFLGTILLLFSFSAFSFIVFIVQPDRLYLHGVIFEVRVINGFKNNSSLPLVIWCSSKE 62

Query: 62  SDLGGRALQEHDDFSWRVTTKLWNTNQFCCTMKWDAKRKSFDAFKVPRDFYRCGIFKKCS 121
           SDLGGRALQEHDDFSW+VTTKLW +NQF CTMKWDAKRKSFDAFKVPRDFYRCG FKKCS
Sbjct: 63  SDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRKSFDAFKVPRDFYRCGNFKKCS 122

Query: 122 WLVREDGFYFSPDEVNWKKDFQW 145
           WLV EDGFYFSPDE+NWKKDFQW
Sbjct: 123 WLVTEDGFYFSPDEINWKKDFQW 145

[Close]
BLAST of CmaCh08G010370 vs. NCBI nr
Match: gi|449442499|ref|XP_004139019.1| (PREDICTED: uncharacterized protein LOC101209275 [Cucumis sativus])

HSP 1 Score: 249.2 bits (635), Expect = 4.3e-63
Identity = 109/123 (88.62%), Postives = 117/123 (95.12%), Query Frame = 1 

Query: 22  IFIIQPDRLYLHGVVYEVRVINGFTNNSSLPLVIWCSSKDSDLGGRALQEHDDFSWRVTT 81
           +FIIQPDRLYLHGVV+EVRVINGF NNSSLPLVIWCSSK++DLGGRALQEHDDFSW+VTT
Sbjct: 1   MFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTT 60

Query: 82  KLWNTNQFCCTMKWDAKRKSFDAFKVPRDFYRCGIFKKCSWLVREDGFYFSPDEVNWKKD 141
           KLW +NQF CTMKWDAKR+SFDAFKVPRDFYRCG FKKCSWLV EDGFYFS DE+NWKKD
Sbjct: 61  KLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKD 120

Query: 142 FQW 145
           FQW
Sbjct: 121 FQW 123

[Close]
BLAST of CmaCh08G010370 vs. NCBI nr
Match: gi|596253311|ref|XP_007224750.1| (hypothetical protein PRUPE_ppa024197mg [Prunus persica])

HSP 1 Score: 208.4 bits (529), Expect = 8.5e-51
Identity = 96/142 (67.61%), Postives = 113/142 (79.58%), Query Frame = 1 

Query: 4   KILNTILLLLFVSAFSFFIFIIQPDRLYLHGVVYEVRVINGFTNNSSLPLVIWCSSKDSD 63
           KIL +ILL+  +++F  F+ I+QP   Y  G+ Y++RVINGFTNNSSLPLVIWC+S+ SD
Sbjct: 2   KILTSILLICGLASFVIFMSILQPQNFY--GIEYDIRVINGFTNNSSLPLVIWCASEHSD 61

Query: 64  LGGRALQEHDDFSWRVTTKLWNTNQ-FCCTMKWDAKRKSFDAFKVPRDFYRCGIFKKCSW 123
           LGGRALQEHDDFSW + T  W TN  F CTMKWD  R+SF+AFK PRD  RCG F+KCSW
Sbjct: 62  LGGRALQEHDDFSWSLRTNFWGTNDHFKCTMKWDRTRRSFEAFKAPRDTQRCGPFRKCSW 121

Query: 124 LVREDGFYFSPDEVNWKKDFQW 145
           LVREDGFYFS DEVNW+KDF W
Sbjct: 122 LVREDGFYFSNDEVNWRKDFSW 141

[Close]
BLAST of CmaCh08G010370 vs. NCBI nr
Match: gi|449432460|ref|XP_004134017.1| (PREDICTED: uncharacterized protein LOC101218823 [Cucumis sativus])

HSP 1 Score: 207.2 bits (526), Expect = 1.9e-50
Identity = 98/147 (66.67%), Postives = 114/147 (77.55%), Query Frame = 1 

Query: 1   MKKKILNTILLLLFVSAFSFFIFIIQPDRLYLHGVVYEVRVINGFTNNSSLPLVIWCSSK 60
           M  KIL +IL+L+F   F+ F+ ++  ++L+  G+ YEVRVINGFTNNSSLPLVIWC+SK
Sbjct: 1   MIMKILVSILMLIFFPFFTVFVSLLPAEQLF--GIEYEVRVINGFTNNSSLPLVIWCASK 60

Query: 61  DSDLGGRALQEHDDFSWRVTTKLW---NTNQFCCTMKWDAKRKSFDAFKVPRDFYRCGIF 120
           D D+GGRALQEHDDFSW V T  W    T+QF CT+K D  RKSFDAFKVPRD YRC   
Sbjct: 61  DGDIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSAL 120

Query: 121 KKCSWLVREDGFYFSPDEVNWKKDFQW 145
           +KCSWLV EDGFYFS DEVNWKKDF W
Sbjct: 121 RKCSWLVMEDGFYFSDDEVNWKKDFSW 145

[Close]
BLAST of CmaCh08G010370 vs. NCBI nr
Match: gi|567854863|ref|XP_006420551.1| (hypothetical protein CICLE_v10006174mg [Citrus clementina])

HSP 1 Score: 202.2 bits (513), Expect = 6.1e-49
Identity = 91/141 (64.54%), Postives = 109/141 (77.30%), Query Frame = 1 

Query: 4   KILNTILLLLFVSAFSFFIFIIQPDRLYLHGVVYEVRVINGFTNNSSLPLVIWCSSKDSD 63
           K LN+ILL+  ++    F+ ++QP   Y  GV Y+VRVINGFTNNSSL LVIWCSS++ D
Sbjct: 2   KTLNSILLIFCLAIGIIFMSVLQPQHFY--GVEYDVRVINGFTNNSSLALVIWCSSEEGD 61

Query: 64  LGGRALQEHDDFSWRVTTKLWNTNQFCCTMKWDAKRKSFDAFKVPRDFYRCGIFKKCSWL 123
           +GGRALQ  DD+ WR+ TK+W T  F CTMKWD KR+ F AFKVPRD  RC +F+KCSWL
Sbjct: 62  MGGRALQAGDDYGWRLRTKIWGTTDFMCTMKWDQKRRRFHAFKVPRDSLRCNLFRKCSWL 121

Query: 124 VREDGFYFSPDEVNWKKDFQW 145
           V+EDGFYFS DEVNWKKDF W
Sbjct: 122 VKEDGFYFSNDEVNWKKDFSW 140

The following BLAST results are available for this feature:
BLAST of CmaCh08G010370 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh08G010370 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LNI8_CUCSA3.0e-6388.62Uncharacterized protein OS=Cucumis sativus GN=Csa_2G153590 PE=4 SV=1[more]
M5XJ42_PRUPE5.9e-5167.61Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024197mg PE=4 SV=1[more]
V4SA14_9ROSI4.2e-4964.54Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006174mg PE=4 SV=1[more]
A0A067EX92_CITSI4.2e-4964.54Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g046294mg PE=4 SV=1[more]
B9H006_POPTR7.2e-4965.25Self-incompatibility family protein OS=Populus trichocarpa GN=POPTR_0003s17380g ... [more]
BLAST of CmaCh08G010370 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G24060.11.1e-4356.94 Plant self-incompatibility protein S1 family[more]
AT1G04645.12.0e-1035.06 Plant self-incompatibility protein S1 family[more]
AT4G16195.13.6e-0731.33 Plant self-incompatibility protein S1 family[more]
AT1G26797.18.0e-0729.11 Plant self-incompatibility protein S1 family[more]
AT1G26796.11.0e-0629.87 Plant self-incompatibility protein S1 family[more]
BLAST of CmaCh08G010370 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659121582|ref|XP_008460730.1|7.4e-7186.71PREDICTED: uncharacterized protein LOC103499491 [Cucumis melo][more]
gi|449442499|ref|XP_004139019.1|4.3e-6388.62PREDICTED: uncharacterized protein LOC101209275 [Cucumis sativus][more]
gi|596253311|ref|XP_007224750.1|8.5e-5167.61hypothetical protein PRUPE_ppa024197mg [Prunus persica][more]
gi|449432460|ref|XP_004134017.1|1.9e-5066.67PREDICTED: uncharacterized protein LOC101218823 [Cucumis sativus][more]
gi|567854863|ref|XP_006420551.1|6.1e-4964.54hypothetical protein CICLE_v10006174mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010264Self-incomp_S1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh08G010370.1CmaCh08G010370.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010264Plant self-incompatibility S1PFAMPF05938Self-incomp_S1coord: 39..144
score: 4.1
NoneNo IPR availablePANTHERPTHR31232FAMILY NOT NAMEDcoord: 9..144
score: 6.8
NoneNo IPR availablePANTHERPTHR31232:SF8SUBFAMILY NOT NAMEDcoord: 9..144
score: 6.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh08G010370Cucsa.256140Cucumber (Gy14) v1cgycmaB0732
CmaCh08G010370Cla002935Watermelon (97103) v1cmawmB878
CmaCh08G010370Cla021451Watermelon (97103) v1cmawmB869
CmaCh08G010370Csa3G133250Cucumber (Chinese Long) v2cmacuB885
CmaCh08G010370MELO3C023093Melon (DHL92) v3.5.1cmameB845
CmaCh08G010370MELO3C006342Melon (DHL92) v3.5.1cmameB850
CmaCh08G010370ClCG05G003630Watermelon (Charleston Gray)cmawcgB795
CmaCh08G010370CSPI03G11230Wild cucumber (PI 183967)cmacpiB903
CmaCh08G010370CmoCh06G012770Cucurbita moschata (Rifu)cmacmoB910
CmaCh08G010370CmoCh14G019130Cucurbita moschata (Rifu)cmacmoB883
CmaCh08G010370CmoCh08G010080Cucurbita moschata (Rifu)cmacmoB912
CmaCh08G010370Lsi09G011640Bottle gourd (USVL1VR-Ls)cmalsiB811
CmaCh08G010370Lsi05G018050Bottle gourd (USVL1VR-Ls)cmalsiB839
CmaCh08G010370MELO3C023093.2Melon (DHL92) v3.6.1cmamedB946
CmaCh08G010370MELO3C006342.2Melon (DHL92) v3.6.1cmamedB950
CmaCh08G010370CsaV3_3G011340Cucumber (Chinese Long) v3cmacucB1049
CmaCh08G010370Cla97C05G084300Watermelon (97103) v2cmawmbB914
CmaCh08G010370Cla97C06G117290Watermelon (97103) v2cmawmbB921
CmaCh08G010370Bhi12G001373Wax gourdcmawgoB1102
CmaCh08G010370Bhi12G001333Wax gourdcmawgoB1090
CmaCh08G010370Carg16516Silver-seed gourdcarcmaB0330
CmaCh08G010370Carg06269Silver-seed gourdcarcmaB1327
CmaCh08G010370Carg11012Silver-seed gourdcarcmaB1495
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh08G010370CmaCh14G018670Cucurbita maxima (Rimu)cmacmaB296
CmaCh08G010370CmaCh06G012680Cucurbita maxima (Rimu)cmacmaB554
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh08G010370Cucurbita pepo (Zucchini)cmacpeB895
CmaCh08G010370Cucurbita pepo (Zucchini)cmacpeB916
CmaCh08G010370Cucurbita pepo (Zucchini)cmacpeB928
CmaCh08G010370Cucurbita pepo (Zucchini)cmacpeB930
CmaCh08G010370Cucurbita pepo (Zucchini)cmacpeB931
CmaCh08G010370Cucumber (Gy14) v2cgybcmaB268
CmaCh08G010370Cucumber (Gy14) v2cgybcmaB454
CmaCh08G010370Silver-seed gourdcarcmaB0321
CmaCh08G010370Silver-seed gourdcarcmaB1089
CmaCh08G010370Cucumber (Chinese Long) v3cmacucB1043
CmaCh08G010370Cucumber (Chinese Long) v3cmacucB1058
CmaCh08G010370Watermelon (97103) v2cmawmbB927
CmaCh08G010370Cucurbita maxima (Rimu)cmacmaB373
CmaCh08G010370Cucurbita maxima (Rimu)cmacmaB511
CmaCh08G010370Cucurbita moschata (Rifu)cmacmoB887
CmaCh08G010370Cucurbita moschata (Rifu)cmacmoB909
CmaCh08G010370Wild cucumber (PI 183967)cmacpiB899
CmaCh08G010370Wild cucumber (PI 183967)cmacpiB911
CmaCh08G010370Cucumber (Chinese Long) v2cmacuB881
CmaCh08G010370Cucumber (Chinese Long) v2cmacuB893
CmaCh08G010370Watermelon (Charleston Gray)cmawcgB804
CmaCh08G010370Watermelon (Charleston Gray)cmawcgB811