Csa3G124850 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G124850
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionCRS2-associated factor 1; contains IPR001890 (RNA-binding, CRM domain)
LocationChr3 : 7493265 .. 7496199 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTCGAATTTCAACGACTAAAAACCTAATTTAGTCGAGGGGGAAAATAGAAAGAAAAAACCGCCAATTTTATTCTCTTCGATTATTCGCCGATAAACCCTAAACCCTTTCCGGTGCTTTGTCAGTGTTCATCAATGCTCAATCTGCCTCATGTTCGTCATCAGAACACTTTTCCGCCAAAAATCAATTTCTCATCCTTATACATCTTTCAACCCATGTTTCTTCTACTCCAAACTCCGCGAACTCTACGCATTTGAAGCCCCACCTTCGGTTTCCCCATCGCCGGAGCCCAAACCCCGCTCAAACAAACCTCCGAAGCCGCGGTACAAGCCGCCGTCGTCGCTCGATCTTGGCGGCAAGAAGCCAAGGCGTTCAAATTTGCCGTTTGATTTCCAGTACAGTTACACAGAGACTAGTCCCTCTGTGAGGCCTATTGGGCTTCGAGAACCGAAGTATTCGCCGTTTGGTCCTGGCCGACTTGATCGGGAATGGACTGGGGTGTGTGCCCCGGCGGCGAACCCGAAGGCGACCTCTGTAGAAGGCATGGAAGATCCAAGACTGGAAGGAAAGAGGAGGGTCATGAGAGAGGCTATTCAAGGGGAGCCATTGCCAGGAGCCGAGAGAAAGGCCTTGGTGGAGAAATGTCAAAAGAATAAAACAAAGAGGCAGATTAATTTGGGTATGTGATTTTATGGGGTCTGCTAGCTGCAAAGATTGGAAATTTGATGATTTTGTTCCAAATTTTGTGGAATTGTGGTGAAAGTATTTGAAAATTTAGGCGATCGTGTGGTTGTTTCTTTCCATCCTTTTAATGGGTTGTTCAATGTTTGTCTTGTAATCTGCAAGTTATTTTGTTACCTTGGTATTTTTGCTGTATTAGACTATTGTGTTTGATTTTCTCAAAATTAGAGTCTGTACTCTGGAGTAGTTCAAGAAAAAATAATATTTGAACTAACGAATGGGCATTGTTATACTTGTTTATTAGCATACATGTAAATGATATTATTTTTATAATTTTTTGTTTTTCTTTTGTCATTTCAATGATAGATTACCATTCCAACTCCTCATTCCGATGTTTGAACCACGAGGTTTAGGGAAATATTGACATGTTGGTAGATATTTTATTATATCATGAACCCTTTATTTTGTGGCATTATCTCTGATAAGTTGATTTCGAATGTTGAAATCGAATAGCAAAGCATCTCAGATATTATATGTATGTTGGGCATTCCTTTGCGGAAGCTTCATTAATCTATCGTTTGATTTAAAGTTGTAGGTCTTGAAATAGTTCGAGGAACTTTAGATACCTGGAAATTGTTTATATTTCTGCATTATTTCACTATTTGGTTCTTACCCTCGATGAAAAAAATACTGAGGTGGATGATAAGATCGGTGGTCTGGTATAGAGGATGGTGTTTCCTCATCATCTTTAATTAACCGGTGCTACATGGATATTGAAAATATCTTATTTTCTGTGCCTATATTACTGAGAAATCTTATAATATGATCCCTATAATGACTAGCTCTATAGTAGTAATGGCATTTTTTTTTCTATGTGGTTGTAGGAAGAGATGGTTTGACTCACAATATGTTGAATGATATTCATAATCACTGGAGACATGGTGAAGCAGTGAGGATCAAATGTCTAGGAGTTCCCACTGTAGATATGAAAAACGTGTGCACGCAACTTGAGGTATGGTTTTCGTTTCTTTGGCTGGAATCATCTTGCTTTAGATACAAGTTTTTAGTTTTTCATTTCTTAAGTTATATTGGCTTGCATTCCACAAATTATATCAACTAATTAAAAATATTTTTTGAGTCACTCACACCCTTTGGCACTTTTCTTAATGTCCGTTTACTTCAAGCTTTGTTCATGATTGCAGGACAAGACATTTGGAAAGATCATTCATAGGCATGGTGGTTTTCTTGTTCTATACAGAGGGAGGAACTATAATCCCAAGAAAAGGCCATTCATTCCTTTAATGTTATGGAGACCCCATGAACCTATATATCCCAGGCTGATTAAAACTACGATTGATGGACTAAGCATCGATGAAACAAAAGAAATGAGAAAGAAAGGACTAGCTGTTCCTGCTTTGACAAAGCTTGGTATGTGTTTGAGAACCTTTTTTTGTAAAACTTCTTTCCACTAATTATCGTATTATCACGAGGTCATTAACTATCACATGATATCTGTGGATTTTAGCAAAGAATGGTTACTATGGTAGTTTAGTACCCATGGTTCGAGATGCTTTTCTCTCCTGTGAGTTGGTTCGAATTGACTGTAAAGGCCTTGAGAGGAGTGATTACAAGAAAATTGGCTGCAAGCTTCGGGTAATGGCCATGCCCTTCATGCCTTTGCATAACTATTCTTCAATTCTTAAATCTTATAAAGCAAAGAGCCTTATAATATGCCATGACATGAGTGTTGTTATCCGATCACCATTTTTCATGGCTAAATTATTTCCATTTTTGATCAACTTTATTTTCTTGAATCAGGACCTCGTGCCTTGTATCTTGGTGACATTTGATAAGGAGCAGATTGTAGTTTGGAGGGGCAAGGATTACCAGCCCTTAGACACTGGTTATCTTACAGTCAGAGAGACCTTTGATGATGTTGATGGGAATACAGGTTGTGTTGACGATGAGGTCGTGATGGAGACATGAACATCGATTACTGTGATGCGGGCTTTCATTCTGGTAACAGTGACAGTGAGTAGTTTCTTGGTTGCTTCATATCACATCCAAATCATTTTGCCAAAATAATATTATGATCCTTTTCGCCTGAAGATTGACCCATATAACATATTCTTTTCCCATATCTTCTGTTTGCCTTATTCTCATGCTCTTCCAGGGAAGAAGTGAAAATCTTGTTCGGAGATTCAAATGTCTAATTTTTTGGTCAAAGGTACATATCTTAACGAGTTAAACTATGT

mRNA sequence

ATGTTCGTCATCAGAACACTTTTCCGCCAAAAATCAATTTCTCATCCTTATACATCTTTCAACCCATGTTTCTTCTACTCCAAACTCCGCGAACTCTACGCATTTGAAGCCCCACCTTCGGTTTCCCCATCGCCGGAGCCCAAACCCCGCTCAAACAAACCTCCGAAGCCGCGGTACAAGCCGCCGTCGTCGCTCGATCTTGGCGGCAAGAAGCCAAGGCGTTCAAATTTGCCGTTTGATTTCCAGTACAGTTACACAGAGACTAGTCCCTCTGTGAGGCCTATTGGGCTTCGAGAACCGAAGTATTCGCCGTTTGGTCCTGGCCGACTTGATCGGGAATGGACTGGGGTGTGTGCCCCGGCGGCGAACCCGAAGGCGACCTCTGTAGAAGGCATGGAAGATCCAAGACTGGAAGGAAAGAGGAGGGTCATGAGAGAGGCTATTCAAGGGGAGCCATTGCCAGGAGCCGAGAGAAAGGCCTTGGTGGAGAAATGTCAAAAGAATAAAACAAAGAGGCAGATTAATTTGGGAAGAGATGGTTTGACTCACAATATGTTGAATGATATTCATAATCACTGGAGACATGGTGAAGCAGTGAGGATCAAATGTCTAGGAGTTCCCACTGTAGATATGAAAAACGTGTGCACGCAACTTGAGGACAAGACATTTGGAAAGATCATTCATAGGCATGGTGGTTTTCTTGTTCTATACAGAGGGAGGAACTATAATCCCAAGAAAAGGCCATTCATTCCTTTAATGTTATGGAGACCCCATGAACCTATATATCCCAGGCTGATTAAAACTACGATTGATGGACTAAGCATCGATGAAACAAAAGAAATGAGAAAGAAAGGACTAGCTGTTCCTGCTTTGACAAAGCTTGCAAAGAATGGTTACTATGGTAGTTTAGTACCCATGGTTCGAGATGCTTTTCTCTCCTGTGAGTTGGTTCGAATTGACTGTAAAGGCCTTGAGAGGAGTGATTACAAGAAAATTGGCTGCAAGCTTCGGGACCTCGTGCCTTGTATCTTGGTGACATTTGATAAGGAGCAGATTGTAGTTTGGAGGGGCAAGGATTACCAGCCCTTAGACACTGGTTATCTTACAGTCAGAGAGACCTTTGATGATGTTGATGGGAATACAGGTTGTGTTGACGATGAGGTCGTGATGGAGACATGA

Coding sequence (CDS)

ATGTTCGTCATCAGAACACTTTTCCGCCAAAAATCAATTTCTCATCCTTATACATCTTTCAACCCATGTTTCTTCTACTCCAAACTCCGCGAACTCTACGCATTTGAAGCCCCACCTTCGGTTTCCCCATCGCCGGAGCCCAAACCCCGCTCAAACAAACCTCCGAAGCCGCGGTACAAGCCGCCGTCGTCGCTCGATCTTGGCGGCAAGAAGCCAAGGCGTTCAAATTTGCCGTTTGATTTCCAGTACAGTTACACAGAGACTAGTCCCTCTGTGAGGCCTATTGGGCTTCGAGAACCGAAGTATTCGCCGTTTGGTCCTGGCCGACTTGATCGGGAATGGACTGGGGTGTGTGCCCCGGCGGCGAACCCGAAGGCGACCTCTGTAGAAGGCATGGAAGATCCAAGACTGGAAGGAAAGAGGAGGGTCATGAGAGAGGCTATTCAAGGGGAGCCATTGCCAGGAGCCGAGAGAAAGGCCTTGGTGGAGAAATGTCAAAAGAATAAAACAAAGAGGCAGATTAATTTGGGAAGAGATGGTTTGACTCACAATATGTTGAATGATATTCATAATCACTGGAGACATGGTGAAGCAGTGAGGATCAAATGTCTAGGAGTTCCCACTGTAGATATGAAAAACGTGTGCACGCAACTTGAGGACAAGACATTTGGAAAGATCATTCATAGGCATGGTGGTTTTCTTGTTCTATACAGAGGGAGGAACTATAATCCCAAGAAAAGGCCATTCATTCCTTTAATGTTATGGAGACCCCATGAACCTATATATCCCAGGCTGATTAAAACTACGATTGATGGACTAAGCATCGATGAAACAAAAGAAATGAGAAAGAAAGGACTAGCTGTTCCTGCTTTGACAAAGCTTGCAAAGAATGGTTACTATGGTAGTTTAGTACCCATGGTTCGAGATGCTTTTCTCTCCTGTGAGTTGGTTCGAATTGACTGTAAAGGCCTTGAGAGGAGTGATTACAAGAAAATTGGCTGCAAGCTTCGGGACCTCGTGCCTTGTATCTTGGTGACATTTGATAAGGAGCAGATTGTAGTTTGGAGGGGCAAGGATTACCAGCCCTTAGACACTGGTTATCTTACAGTCAGAGAGACCTTTGATGATGTTGATGGGAATACAGGTTGTGTTGACGATGAGGTCGTGATGGAGACATGA

Protein sequence

MFVIRTLFRQKSISHPYTSFNPCFFYSKLRELYAFEAPPSVSPSPEPKPRSNKPPKPRYKPPSSLDLGGKKPRRSNLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDREWTGVCAPAANPKATSVEGMEDPRLEGKRRVMREAIQGEPLPGAERKALVEKCQKNKTKRQINLGRDGLTHNMLNDIHNHWRHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKDYQPLDTGYLTVRETFDDVDGNTGCVDDEVVMET*
Homology
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BLAST of Csa3G124850 vs. Swiss-Prot
Match: CAF1M_ARATH (CRS2-associated factor 1, mitochondrial OS=Arabidopsis thaliana GN=At4g31010 PE=2 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 2.3e-151
Identity = 264/367 (71.93%), Postives = 299/367 (81.47%), Query Frame = 1 

Query: 27  SKLRELYAFEAPPSVSPSPEPKPRSN------KPPKPRYKPPSSLDLGGKKPRRSNLPFD 86
           S+LR+LY F++PP +S S    P  N      K PKP+Y+PPSSL+  G K   S+LPFD
Sbjct: 29  SRLRDLYNFQSPPPLSSSASENPDFNQKNNNKKKPKPQYRPPSSLE--GVKTVHSDLPFD 88

Query: 87  FQYSYTETSPSVRPIGLREPKYSPFGPGRLDREWTGVCAPAANPKATSVEGMEDPRLEGK 146
           F++SYTE+  +VRPIGLREPKYSPFGP RLDREWTGVCAPA NPK  SV+G+EDP+LE K
Sbjct: 89  FRFSYTESCSNVRPIGLREPKYSPFGPDRLDREWTGVCAPAVNPKVESVDGVEDPKLEEK 148

Query: 147 RRVMREAIQGEPLPGAERKALVEKCQKNKTKRQINLGRDGLTHNMLNDIHNHWRHGEAVR 206
           RR +RE IQG  L  AERK LVE CQ+NKTKRQ+NLGRDGLTHNMLND++NHW+H EAVR
Sbjct: 149 RRKVREKIQGASLTEAERKFLVELCQRNKTKRQVNLGRDGLTHNMLNDVYNHWKHAEAVR 208

Query: 207 IKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEP 266
           +KCLGVPT+DMKNV   LEDKTFG+++ +H G LVLYRGRNY+PKKRP IPLMLW+PHEP
Sbjct: 209 VKCLGVPTLDMKNVIFHLEDKTFGQVVSKHSGTLVLYRGRNYDPKKRPKIPLMLWKPHEP 268

Query: 267 IYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLSCELVRID 326
           +YPRLIKTTIDGLSIDETK MRKKGLAVPALTKLAKNGYYGSLVPMVRDAFL  ELVRID
Sbjct: 269 VYPRLIKTTIDGLSIDETKAMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLVSELVRID 328

Query: 327 CKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKDYQP--LDTGYLTV--RETFDD 384
           C GLER DYKKIG KLRDLVPCILVTFDKEQ+V+WRGKDY+P   D  Y +   RE+  D
Sbjct: 329 CLGLERKDYKKIGAKLRDLVPCILVTFDKEQVVIWRGKDYKPPKEDDEYSSFIHRESSID 388

[Close]
BLAST of Csa3G124850 vs. Swiss-Prot
Match: CAF1M_ORYSJ (CRS2-associated factor 1, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g0174900 PE=3 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 1.2e-136
Identity = 238/343 (69.39%), Postives = 274/343 (79.88%), Query Frame = 1 

Query: 27  SKLRELYAFEAPPSVSP---SPEPKPRSNKPPKPRYKPPSSLDLGGKKPRRSNLPFDFQY 86
           S L + Y F  P S++P   S +   +  +P KP Y+PPSSLD GG+   RS+LPFDF++
Sbjct: 23  SGLLDRYGFVPPASLTPHSASDDGGAKKRRPKKPPYRPPSSLDRGGRPAARSDLPFDFRF 82

Query: 87  SYTETSPSVRPIGLREPKYSPFGPGRLDREWTGVCAPAANPKATSVEGMEDP------RL 146
           SYTE+SP  +PIGLREPKYSPFGPGRLDR WTG+CAPA +         +DP       L
Sbjct: 83  SYTESSPGDKPIGLREPKYSPFGPGRLDRPWTGLCAPAVDTTLRDAHA-DDPAPAAEREL 142

Query: 147 EGKRRVMREAIQGEPLPGAERKALVEKCQKNKTKRQINLGRDGLTHNMLNDIHNHWRHGE 206
           E  RR  RE + GEPL  AER  LV KCQK++TK+QINLGRDGLTHNMLNDIHNHW++ E
Sbjct: 143 EEARRRERERVLGEPLTPAERAFLVSKCQKSRTKKQINLGRDGLTHNMLNDIHNHWKNDE 202

Query: 207 AVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRP 266
           AVR+KCLGVPTVDM+NVC QLEDKT G IIHRHGG L+LYRGR+YNPKKRP IPLMLW+P
Sbjct: 203 AVRVKCLGVPTVDMQNVCHQLEDKTGGLIIHRHGGQLILYRGRHYNPKKRPVIPLMLWKP 262

Query: 267 HEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLSCELV 326
            EP+YPRLIKTTI+GL+++ETKEMRKKGL VP LTKLAKNGYY SLVPMVRDAFL+ ELV
Sbjct: 263 AEPVYPRLIKTTIEGLTVEETKEMRKKGLYVPVLTKLAKNGYYASLVPMVRDAFLTDELV 322

Query: 327 RIDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKDY 361
           RID KGL +SDY+KIG KLRDLVPCI+V+FDKEQI+VWRGKDY
Sbjct: 323 RIDSKGLPKSDYRKIGVKLRDLVPCIIVSFDKEQIIVWRGKDY 364

[Close]
BLAST of Csa3G124850 vs. Swiss-Prot
Match: CAF2M_ORYSJ (CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g0188000 PE=2 SV=2)

HSP 1 Score: 339.7 bits (870), Expect = 4.2e-92
Identity = 174/338 (51.48%), Postives = 222/338 (65.68%), Query Frame = 1 

Query: 30  RELYAFEAPPSVSPSPEPK--PRSNKPPKP--RYKPPSSLDLGGK----KPRRSNLPFDF 89
           R L    APP   P  +P     + +PP+   + K     D GG+    +P  S+LPFDF
Sbjct: 24  RRLNHHRAPPFSDPDDDPPFTRLAERPPRAPSKKKKKEEEDQGGRIRPPEPASSDLPFDF 83

Query: 90  QYSYTETSPSVRPIGLREP-KYSPFGPGRLDREWTGVCAPAANPKATSVEGMEDPRLEGK 149
           +YSY+ET P+ RPIG REP ++SPFGPGRLDR W GV A AA  +             G 
Sbjct: 84  RYSYSETDPAWRPIGFREPTRFSPFGPGRLDRPWDGVAAAAARGEGA-----------GA 143

Query: 150 RRVMREAIQGEPLPGAERKALVEKCQKNKTKRQINLGRDGLTHNMLNDIHNHWRHGEAVR 209
               RE + GEPL   E   LVE+ + +   RQINLG+ G+THNM++DIHNHW+  EAVR
Sbjct: 144 AATSREEVLGEPLAEEEVAQLVERYRHSDCSRQINLGKGGVTHNMIDDIHNHWKRAEAVR 203

Query: 210 IKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEP 269
           IKCLGVPT+DM N+C  LEDKT GK+I+R+   L+LYRGRNY+PK+RP IPLMLW+P  P
Sbjct: 204 IKCLGVPTLDMDNICFHLEDKTGGKVIYRNINILILYRGRNYDPKQRPQIPLMLWKPLAP 263

Query: 270 IYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLSCELVRID 329
           IYPRL++   DGL+ ++TKE+R  GL    L KL +NG Y ++V  VR+AF + E+VR+D
Sbjct: 264 IYPRLVQNVADGLTFEKTKELRNTGLNSSPLMKLTRNGVYVNVVDRVREAFKTVEVVRLD 323

Query: 330 CKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGK 359
           C  +  SD KKIG KLRDLVPC+ + F  EQI++WRGK
Sbjct: 324 CSHVGSSDCKKIGVKLRDLVPCVPLLFKDEQIILWRGK 350

[Close]
BLAST of Csa3G124850 vs. Swiss-Prot
Match: CAF2M_ARATH (CRS2-associated factor 2, mitochondrial OS=Arabidopsis thaliana GN=At5g54890 PE=2 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 1.3e-90
Identity = 167/326 (51.23%), Postives = 221/326 (67.79%), Query Frame = 1 

Query: 35  FEAPPSVSPSPEPKPRSNKPPKPRYKPPSSLDLGGKK-PRRSNLPFDFQYSYTETSPSVR 94
           ++ P S    P   P+  K  K + +  SS  +   K P  S+LPFDF+YSY+ET+P + 
Sbjct: 34  YDPPFSPLSKPTKPPKEKKKQKTKKQDQSSELVNDLKIPVISDLPFDFRYSYSETNPEIE 93

Query: 95  PIGLREPK-YSPFGPGRLDREWTGVCAPAANPKATSVEGMEDPRLEGKRRVMREAIQGEP 154
           PIG REPK +SPFGPGRLDR+WTG  A  A+P+    + +E+          R  + GE 
Sbjct: 94  PIGFREPKRFSPFGPGRLDRKWTGTTA-LASPEIDQSQWVEE----------RARVLGET 153

Query: 155 LPGAERKALVEKCQKNKTKRQINLGRDGLTHNMLNDIHNHWRHGEAVRIKCLGVPTVDMK 214
           L   E   L+E+ + +   RQINLG+ G+THNM++DIHNHW+  EAVRIKCLGVPT+DM 
Sbjct: 154 LTEDEVTELIERYRHSDCTRQINLGKGGVTHNMIDDIHNHWKKAEAVRIKCLGVPTLDMD 213

Query: 215 NVCTQLEDKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDG 274
           N+C  LE+K+ GKI++R+   LVLYRGRNY+PK RP IPLMLW+PH PIYPRL+K   DG
Sbjct: 214 NICFHLEEKSGGKIVYRNINILVLYRGRNYDPKSRPIIPLMLWKPHPPIYPRLVKNVADG 273

Query: 275 LSIDETKEMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCKGLERSDYKKI 334
           L  +ETKEMR +GL  PAL KL +NG Y ++V  VR+ F + E+VR+DC  +  SD K+I
Sbjct: 274 LEFEETKEMRNRGLHSPALMKLTRNGVYVNVVGRVREEFETEEIVRLDCTHVGMSDCKRI 333

Query: 335 GCKLRDLVPCILVTFDKEQIVVWRGK 359
           G KL+++VPC+ + F  EQI++WRGK
Sbjct: 334 GVKLKEMVPCVPILFKDEQIILWRGK 348

[Close]
BLAST of Csa3G124850 vs. Swiss-Prot
Match: CAF1P_ARATH (CRS2-associated factor 1, chloroplastic OS=Arabidopsis thaliana GN=At2g20020 PE=2 SV=2)

HSP 1 Score: 310.1 bits (793), Expect = 3.5e-83
Identity = 169/374 (45.19%), Postives = 227/374 (60.70%), Query Frame = 1 

Query: 35  FEAPPSVSPSPEPKPR-SNKPPKPRYKPPSSLDLGGKKPRRSNLPFDFQYSYTETSPSVR 94
           +  P S    P+ KPR  + PP+   KP   L   G     +  PF+F+YSYTET P V+
Sbjct: 106 YSKPDSGPNRPKNKPRVPDSPPQLDAKPEVKLSEDGLTYVINGAPFEFKYSYTET-PKVK 165

Query: 95  PIGLREPKYSPFGPGRLDREWTGVCAPAANPKATSVE------------GMEDPRLEGKR 154
           P+ LREP Y+PFGP  + R WTG  AP    + T  E            G++  +  G  
Sbjct: 166 PLKLREPAYAPFGPTTMGRPWTGR-APLPQSQKTPREFDSFRLPPVGKKGLKPVQKPGPF 225

Query: 155 R--------VMREAIQGEPLPGAERKALVEKCQKNKTKRQINLGRDGLTHNMLNDIHNHW 214
           R          +E I GEPL   E + LV  C K  T RQ+N+GRDGLTHNMLN+IH+ W
Sbjct: 226 RPGVGPRYVYSKEEILGEPLTKEEVRELVTSCLK--TTRQLNMGRDGLTHNMLNNIHDLW 285

Query: 215 RHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLM 274
           +     +IKC GV TVDM NVC QLE+K  GK+I+R GG L L+RGRNYN + RP  PLM
Sbjct: 286 KRRRVCKIKCKGVCTVDMDNVCEQLEEKIGGKVIYRRGGVLFLFRGRNYNHRTRPRFPLM 345

Query: 275 LWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLS 334
           LW+P  P+YPRLI+   +GL+  E   MR+KG  +  + KL KNG Y  LV  V++AF  
Sbjct: 346 LWKPVAPVYPRLIQQVPEGLTRQEATNMRRKGRELMPICKLGKNGVYCDLVKNVKEAFEV 405

Query: 335 CELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKDYQPLDTGYLTVRET 388
           CELVRIDC+G++ SD++KIG KL+DLVPC+LV+F+ EQI++WRG++++   T      + 
Sbjct: 406 CELVRIDCQGMKGSDFRKIGAKLKDLVPCVLVSFENEQILIWRGREWKSSLTTPDKKGDI 465

[Close]
BLAST of Csa3G124850 vs. TrEMBL
Match: A0A0A0L906_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124850 PE=4 SV=1)

HSP 1 Score: 820.5 bits (2118), Expect = 9.0e-235
Identity = 392/392 (100.00%), Postives = 392/392 (100.00%), Query Frame = 1 

Query: 1   MFVIRTLFRQKSISHPYTSFNPCFFYSKLRELYAFEAPPSVSPSPEPKPRSNKPPKPRYK 60
           MFVIRTLFRQKSISHPYTSFNPCFFYSKLRELYAFEAPPSVSPSPEPKPRSNKPPKPRYK
Sbjct: 1   MFVIRTLFRQKSISHPYTSFNPCFFYSKLRELYAFEAPPSVSPSPEPKPRSNKPPKPRYK 60

Query: 61  PPSSLDLGGKKPRRSNLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDREWTGVCAP 120
           PPSSLDLGGKKPRRSNLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDREWTGVCAP
Sbjct: 61  PPSSLDLGGKKPRRSNLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDREWTGVCAP 120

Query: 121 AANPKATSVEGMEDPRLEGKRRVMREAIQGEPLPGAERKALVEKCQKNKTKRQINLGRDG 180
           AANPKATSVEGMEDPRLEGKRRVMREAIQGEPLPGAERKALVEKCQKNKTKRQINLGRDG
Sbjct: 121 AANPKATSVEGMEDPRLEGKRRVMREAIQGEPLPGAERKALVEKCQKNKTKRQINLGRDG 180

Query: 181 LTHNMLNDIHNHWRHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGR 240
           LTHNMLNDIHNHWRHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGR
Sbjct: 181 LTHNMLNDIHNHWRHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGR 240

Query: 241 NYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYY 300
           NYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYY
Sbjct: 241 NYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYY 300

Query: 301 GSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKDY 360
           GSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKDY
Sbjct: 301 GSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKDY 360

Query: 361 QPLDTGYLTVRETFDDVDGNTGCVDDEVVMET 393
           QPLDTGYLTVRETFDDVDGNTGCVDDEVVMET
Sbjct: 361 QPLDTGYLTVRETFDDVDGNTGCVDDEVVMET 392

[Close]
BLAST of Csa3G124850 vs. TrEMBL
Match: E6NU21_JATCU (JHL05D22.2 protein OS=Jatropha curcas GN=JHL05D22.2 PE=4 SV=1)

HSP 1 Score: 583.9 bits (1504), Expect = 1.4e-163
Identity = 281/358 (78.49%), Postives = 311/358 (86.87%), Query Frame = 1 

Query: 27  SKLRELYAFEAPPSVSPSP--EPKPRSNKPPKPRYKPPSSLDLGGKKPRRSNLPFDFQYS 86
           SKL + YAF  PPS+SP     P P + K  KP Y+PPS+LD  GKKP  S+LPFDF+YS
Sbjct: 34  SKLHDHYAFRPPPSLSPQEPDNPNPTTRKKQKPLYRPPSTLDRTGKKPTHSDLPFDFRYS 93

Query: 87  YTETSPSVRPIGLREPKYSPFGPGRLDREWTGVCAPAANPKATSVEGMEDPRLEGKRRVM 146
           YTE+S SVRPIGLREPKYSPFGP RLDR WTGVCAPA +PK  S++G +DP LE KR++M
Sbjct: 94  YTESSQSVRPIGLREPKYSPFGPDRLDRSWTGVCAPAVDPKVKSLDGTDDPNLEEKRKLM 153

Query: 147 REAIQGEPLPGAERKALVEKCQKNKTKRQINLGRDGLTHNMLNDIHNHWRHGEAVRIKCL 206
           RE IQG+PL  AERK LV +CQ+NKTKRQINLGRDGLTHNMLNDIHNHW+H EAVRIKCL
Sbjct: 154 REKIQGDPLTNAERKILVAQCQRNKTKRQINLGRDGLTHNMLNDIHNHWKHAEAVRIKCL 213

Query: 207 GVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPR 266
           GVPTVDMKNVC+QLEDKTFGKIIHRH G LVLYRGRNYNPKKRP IPLM+WRPHEPIYPR
Sbjct: 214 GVPTVDMKNVCSQLEDKTFGKIIHRHCGSLVLYRGRNYNPKKRPVIPLMMWRPHEPIYPR 273

Query: 267 LIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCKGL 326
           LIKTTIDGLSIDETKEMRK+GLAVPALTKLAKNGYY SLVPMVRDAFL+ ELVRIDC+GL
Sbjct: 274 LIKTTIDGLSIDETKEMRKRGLAVPALTKLAKNGYYASLVPMVRDAFLTNELVRIDCQGL 333

Query: 327 ERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKDYQPLDTGYLTV-RETFDDVDGNT 382
           E+SDYKKIGCKLRDLVPCILVTF+KEQIVVWRGKDY+P + G L   RE FDD +G++
Sbjct: 334 EKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYKPPEDGELFADREFFDDPEGSS 391

[Close]
BLAST of Csa3G124850 vs. TrEMBL
Match: D7U7P9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g01220 PE=4 SV=1)

HSP 1 Score: 579.3 bits (1492), Expect = 3.5e-162
Identity = 283/392 (72.19%), Postives = 322/392 (82.14%), Query Frame = 1 

Query: 1   MFVIRTLFRQKSISHP---------YTSFNPCFFYSKLRELYAFEAP--PSVSPSPEPKP 60
           MF++    RQ   SH           +S  P    S+L + Y+F++P  P  +P+P P+P
Sbjct: 1   MFIVTRFSRQIRQSHSAAVTLSTRRLSSSAPPSPSSRLLDHYSFKSPVSPFQNPNPNPEP 60

Query: 61  RSNKPPKPRYKPPSSLDLGGKKPRRSNLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGR 120
            + K  KP Y+PPSSLD  GKKP RS+LPFDF+YSYTE+SP+VRPIGLREPKYSPFGPG 
Sbjct: 61  STKKKQKPPYRPPSSLDRTGKKPLRSDLPFDFRYSYTESSPAVRPIGLREPKYSPFGPGL 120

Query: 121 LDREWTGVCAPAANPKATSVEGMEDPRLEGKRRVMREAIQGEPLPGAERKALVEKCQKNK 180
           LDREWTGVCAPA +PK  SV+G EDP+LE KRR MRE   GEPL  AERK LVEKCQ+++
Sbjct: 121 LDREWTGVCAPAVDPKVRSVDGKEDPKLEEKRRRMREKTLGEPLTAAERKILVEKCQRHR 180

Query: 181 TKRQINLGRDGLTHNMLNDIHNHWRHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHR 240
           TKRQINLGRDGLTHNMLNDIHNHW+H EAVRIKC+GVPTVDMKNVCTQLEDKT GK+IHR
Sbjct: 181 TKRQINLGRDGLTHNMLNDIHNHWKHAEAVRIKCMGVPTVDMKNVCTQLEDKTSGKVIHR 240

Query: 241 HGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVP 300
            GG LVLYRGRNY+PKKRP IPLMLWRPHEPIYPRLIKT IDGLSI+ETKEMRK+GLAVP
Sbjct: 241 QGGLLVLYRGRNYHPKKRPVIPLMLWRPHEPIYPRLIKTVIDGLSIEETKEMRKRGLAVP 300

Query: 301 ALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDK 360
           ALTKLAKNGYYGSLVPMVRDAFL+ EL+RIDC+GLER DYKKIGCKLRD VPCILVTF+K
Sbjct: 301 ALTKLAKNGYYGSLVPMVRDAFLTDELIRIDCQGLERRDYKKIGCKLRDFVPCILVTFEK 360

Query: 361 EQIVVWRGKDYQPLDTGYLTV-RETFDDVDGN 381
           EQIVVWRGKDY+P + G   + RE+ D+ D +
Sbjct: 361 EQIVVWRGKDYKPTEAGQFPIERESLDNWDSD 392

[Close]
BLAST of Csa3G124850 vs. TrEMBL
Match: A0A061DVQ3_THECC (RNA-binding CRS1 / YhbY (CRM) domain-containing protein isoform 1 OS=Theobroma cacao GN=TCM_005454 PE=4 SV=1)

HSP 1 Score: 576.6 bits (1485), Expect = 2.3e-161
Identity = 279/358 (77.93%), Postives = 311/358 (86.87%), Query Frame = 1 

Query: 27  SKLRELYAFEAPPSVSPSPE---PKPRSNKPPKPRYKPPSSLDLGGKKPRRSNLPFDFQY 86
           SKLR+ Y+F+ PPS+SP+P+   P P  NK  KP+Y+P SSLD    KP  S+L FDF++
Sbjct: 32  SKLRDHYSFQPPPSLSPNPQNTTPNPNLNKKQKPKYRPASSLDR--IKPTHSDLAFDFRF 91

Query: 87  SYTETSPSVRPIGLREPKYSPFGPGRLDREWTGVCAPAANPKATSVEGMEDPRLEGKRRV 146
           SYTE+SP+VRPIGLREPKYSPFGPGRLDREWTGVCAPA +PK  SV+G EDP+LE KRR+
Sbjct: 92  SYTESSPTVRPIGLREPKYSPFGPGRLDREWTGVCAPAVDPKVKSVDGSEDPKLEEKRRL 151

Query: 147 MREAIQGEPLPGAERKALVEKCQKNKTKRQINLGRDGLTHNMLNDIHNHWRHGEAVRIKC 206
           +RE IQG PL  AERK LV KCQ+NKTKRQINLGRDGLTHNMLNDIHNHW + EAVRIKC
Sbjct: 152 LRERIQGTPLIEAERKILVGKCQRNKTKRQINLGRDGLTHNMLNDIHNHWTYAEAVRIKC 211

Query: 207 LGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYP 266
           LGVPTVDMKNVCTQLEDKTFGKII RHGG L+LYRGRNYN KKRP IPLMLW+PHEP+YP
Sbjct: 212 LGVPTVDMKNVCTQLEDKTFGKIIQRHGGTLILYRGRNYNRKKRPVIPLMLWKPHEPVYP 271

Query: 267 RLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCKG 326
           RLIKTTIDGLSI+ETKEMRK+GLAVP LTKLAKNGYYGSLVPMVRDAFL  ELVRIDC G
Sbjct: 272 RLIKTTIDGLSIEETKEMRKRGLAVPVLTKLAKNGYYGSLVPMVRDAFLVSELVRIDCTG 331

Query: 327 LERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKDYQPLDTG-YLTVRETFDDVDGN 381
           LERSDYKKIGCKLRDLVPCILVTFDKEQ+VVWRG+DY+P D G + + RE FD+  G+
Sbjct: 332 LERSDYKKIGCKLRDLVPCILVTFDKEQVVVWRGRDYKPPDDGHFFSNREFFDEPSGD 387

[Close]
BLAST of Csa3G124850 vs. TrEMBL
Match: A0A067H4T0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014482mg PE=4 SV=1)

HSP 1 Score: 573.9 bits (1478), Expect = 1.5e-160
Identity = 287/374 (76.74%), Postives = 318/374 (85.03%), Query Frame = 1 

Query: 27  SKLRELYAFEAPPSVSPSPE-PKPRSN------KPPKPRYKPPSSLDLGGKKPRRSNLPF 86
           SKL + Y+F+ PPS+SP PE P P  N      K  KP+Y+PPSSLD   KK   ++LPF
Sbjct: 37  SKLYDHYSFKPPPSLSPKPENPNPTLNPNKNFKKKSKPQYRPPSSLDAPKKK--YTDLPF 96

Query: 87  DFQYSYTETSPSVRPIGLREPKYSPFGPGRLDREWTGVCAPAANPKATSVE-GMEDPRLE 146
           DF+YSYTET+ +VRPIGLREPKYSPFGPGRL+REWTGVCAPAA+PK  S E G EDP LE
Sbjct: 97  DFRYSYTETNQNVRPIGLREPKYSPFGPGRLEREWTGVCAPAADPKVKSAEEGAEDPNLE 156

Query: 147 GKRRVMREAIQGEPLPGAERKALVEKCQKNKTKRQINLGRDGLTHNMLNDIHNHWRHGEA 206
            KR ++RE IQGEPL  AERKALVEKC +N+TKRQINLGRDGLTHNMLNDIHNHW+H EA
Sbjct: 157 EKRILVRERIQGEPLTNAERKALVEKCHRNRTKRQINLGRDGLTHNMLNDIHNHWKHAEA 216

Query: 207 VRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPH 266
           VRIKCLGVPTVDMKNVC QLEDKTFGKII RHGG LVLYRGRNYNPKKRP IPLMLWRPH
Sbjct: 217 VRIKCLGVPTVDMKNVCFQLEDKTFGKIIFRHGGTLVLYRGRNYNPKKRPVIPLMLWRPH 276

Query: 267 EPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLSCELVR 326
           EP+YP+LIKTTI+GLSI+ETKEMRK+GLAVP LTKLAKNGYYGSLVPMVRDAFL  ELVR
Sbjct: 277 EPVYPKLIKTTIEGLSIEETKEMRKRGLAVPVLTKLAKNGYYGSLVPMVRDAFLVSELVR 336

Query: 327 IDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKDYQ-PLDTG-YLTVRETFDD 386
           IDC+GLERSDYKKIGCKLRDLVPCILVTF+KEQIVVWRGKDY+ P D G + T RE FDD
Sbjct: 337 IDCQGLERSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYKHPGDDGQFFTHRELFDD 396

Query: 387 VDGNTGCVDDEVVM 391
            + ++ C  +E VM
Sbjct: 397 PENDSACGVEEEVM 408

[Close]
BLAST of Csa3G124850 vs. TAIR10
Match: AT4G31010.1 (AT4G31010.1 RNA-binding CRS1 / YhbY (CRM) domain-containing protein)

HSP 1 Score: 536.6 bits (1381), Expect = 1.3e-152
Identity = 264/367 (71.93%), Postives = 299/367 (81.47%), Query Frame = 1 

Query: 27  SKLRELYAFEAPPSVSPSPEPKPRSN------KPPKPRYKPPSSLDLGGKKPRRSNLPFD 86
           S+LR+LY F++PP +S S    P  N      K PKP+Y+PPSSL+  G K   S+LPFD
Sbjct: 29  SRLRDLYNFQSPPPLSSSASENPDFNQKNNNKKKPKPQYRPPSSLE--GVKTVHSDLPFD 88

Query: 87  FQYSYTETSPSVRPIGLREPKYSPFGPGRLDREWTGVCAPAANPKATSVEGMEDPRLEGK 146
           F++SYTE+  +VRPIGLREPKYSPFGP RLDREWTGVCAPA NPK  SV+G+EDP+LE K
Sbjct: 89  FRFSYTESCSNVRPIGLREPKYSPFGPDRLDREWTGVCAPAVNPKVESVDGVEDPKLEEK 148

Query: 147 RRVMREAIQGEPLPGAERKALVEKCQKNKTKRQINLGRDGLTHNMLNDIHNHWRHGEAVR 206
           RR +RE IQG  L  AERK LVE CQ+NKTKRQ+NLGRDGLTHNMLND++NHW+H EAVR
Sbjct: 149 RRKVREKIQGASLTEAERKFLVELCQRNKTKRQVNLGRDGLTHNMLNDVYNHWKHAEAVR 208

Query: 207 IKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEP 266
           +KCLGVPT+DMKNV   LEDKTFG+++ +H G LVLYRGRNY+PKKRP IPLMLW+PHEP
Sbjct: 209 VKCLGVPTLDMKNVIFHLEDKTFGQVVSKHSGTLVLYRGRNYDPKKRPKIPLMLWKPHEP 268

Query: 267 IYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLSCELVRID 326
           +YPRLIKTTIDGLSIDETK MRKKGLAVPALTKLAKNGYYGSLVPMVRDAFL  ELVRID
Sbjct: 269 VYPRLIKTTIDGLSIDETKAMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLVSELVRID 328

Query: 327 CKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKDYQP--LDTGYLTV--RETFDD 384
           C GLER DYKKIG KLRDLVPCILVTFDKEQ+V+WRGKDY+P   D  Y +   RE+  D
Sbjct: 329 CLGLERKDYKKIGAKLRDLVPCILVTFDKEQVVIWRGKDYKPPKEDDEYSSFIHRESSID 388

[Close]
BLAST of Csa3G124850 vs. TAIR10
Match: AT5G54890.1 (AT5G54890.1 RNA-binding CRS1 / YhbY (CRM) domain-containing protein)

HSP 1 Score: 334.7 bits (857), Expect = 7.5e-92
Identity = 167/326 (51.23%), Postives = 221/326 (67.79%), Query Frame = 1 

Query: 35  FEAPPSVSPSPEPKPRSNKPPKPRYKPPSSLDLGGKK-PRRSNLPFDFQYSYTETSPSVR 94
           ++ P S    P   P+  K  K + +  SS  +   K P  S+LPFDF+YSY+ET+P + 
Sbjct: 34  YDPPFSPLSKPTKPPKEKKKQKTKKQDQSSELVNDLKIPVISDLPFDFRYSYSETNPEIE 93

Query: 95  PIGLREPK-YSPFGPGRLDREWTGVCAPAANPKATSVEGMEDPRLEGKRRVMREAIQGEP 154
           PIG REPK +SPFGPGRLDR+WTG  A  A+P+    + +E+          R  + GE 
Sbjct: 94  PIGFREPKRFSPFGPGRLDRKWTGTTA-LASPEIDQSQWVEE----------RARVLGET 153

Query: 155 LPGAERKALVEKCQKNKTKRQINLGRDGLTHNMLNDIHNHWRHGEAVRIKCLGVPTVDMK 214
           L   E   L+E+ + +   RQINLG+ G+THNM++DIHNHW+  EAVRIKCLGVPT+DM 
Sbjct: 154 LTEDEVTELIERYRHSDCTRQINLGKGGVTHNMIDDIHNHWKKAEAVRIKCLGVPTLDMD 213

Query: 215 NVCTQLEDKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDG 274
           N+C  LE+K+ GKI++R+   LVLYRGRNY+PK RP IPLMLW+PH PIYPRL+K   DG
Sbjct: 214 NICFHLEEKSGGKIVYRNINILVLYRGRNYDPKSRPIIPLMLWKPHPPIYPRLVKNVADG 273

Query: 275 LSIDETKEMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCKGLERSDYKKI 334
           L  +ETKEMR +GL  PAL KL +NG Y ++V  VR+ F + E+VR+DC  +  SD K+I
Sbjct: 274 LEFEETKEMRNRGLHSPALMKLTRNGVYVNVVGRVREEFETEEIVRLDCTHVGMSDCKRI 333

Query: 335 GCKLRDLVPCILVTFDKEQIVVWRGK 359
           G KL+++VPC+ + F  EQI++WRGK
Sbjct: 334 GVKLKEMVPCVPILFKDEQIILWRGK 348

[Close]
BLAST of Csa3G124850 vs. TAIR10
Match: AT2G20020.1 (AT2G20020.1 RNA-binding CRS1 / YhbY (CRM) domain-containing protein)

HSP 1 Score: 310.1 bits (793), Expect = 2.0e-84
Identity = 169/374 (45.19%), Postives = 227/374 (60.70%), Query Frame = 1 

Query: 35  FEAPPSVSPSPEPKPR-SNKPPKPRYKPPSSLDLGGKKPRRSNLPFDFQYSYTETSPSVR 94
           +  P S    P+ KPR  + PP+   KP   L   G     +  PF+F+YSYTET P V+
Sbjct: 106 YSKPDSGPNRPKNKPRVPDSPPQLDAKPEVKLSEDGLTYVINGAPFEFKYSYTET-PKVK 165

Query: 95  PIGLREPKYSPFGPGRLDREWTGVCAPAANPKATSVE------------GMEDPRLEGKR 154
           P+ LREP Y+PFGP  + R WTG  AP    + T  E            G++  +  G  
Sbjct: 166 PLKLREPAYAPFGPTTMGRPWTGR-APLPQSQKTPREFDSFRLPPVGKKGLKPVQKPGPF 225

Query: 155 R--------VMREAIQGEPLPGAERKALVEKCQKNKTKRQINLGRDGLTHNMLNDIHNHW 214
           R          +E I GEPL   E + LV  C K  T RQ+N+GRDGLTHNMLN+IH+ W
Sbjct: 226 RPGVGPRYVYSKEEILGEPLTKEEVRELVTSCLK--TTRQLNMGRDGLTHNMLNNIHDLW 285

Query: 215 RHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLM 274
           +     +IKC GV TVDM NVC QLE+K  GK+I+R GG L L+RGRNYN + RP  PLM
Sbjct: 286 KRRRVCKIKCKGVCTVDMDNVCEQLEEKIGGKVIYRRGGVLFLFRGRNYNHRTRPRFPLM 345

Query: 275 LWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLS 334
           LW+P  P+YPRLI+   +GL+  E   MR+KG  +  + KL KNG Y  LV  V++AF  
Sbjct: 346 LWKPVAPVYPRLIQQVPEGLTRQEATNMRRKGRELMPICKLGKNGVYCDLVKNVKEAFEV 405

Query: 335 CELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKDYQPLDTGYLTVRET 388
           CELVRIDC+G++ SD++KIG KL+DLVPC+LV+F+ EQI++WRG++++   T      + 
Sbjct: 406 CELVRIDCQGMKGSDFRKIGAKLKDLVPCVLVSFENEQILIWRGREWKSSLTTPDKKGDI 465

[Close]
BLAST of Csa3G124850 vs. TAIR10
Match: AT1G23400.1 (AT1G23400.1 RNA-binding CRS1 / YhbY (CRM) domain-containing protein)

HSP 1 Score: 287.7 bits (735), Expect = 1.1e-77
Identity = 144/303 (47.52%), Postives = 195/303 (64.36%), Query Frame = 1 

Query: 78  PFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDREWTGVCA-----------PAANPKA 137
           PF+FQ+SY+ET P V+P+G+REP + PF P  + R WTG               + NP  
Sbjct: 110 PFEFQFSYSET-PKVKPVGIREPAFMPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPP 169

Query: 138 TSVEGMEDPRLEG--------KRRVMREAIQGEPLPGAERKALVEKCQKNKTKRQINLGR 197
               G++   + G        K  + RE + GEPL   E+  L++    +   RQ+NLGR
Sbjct: 170 AGKSGVKYVEMPGPLPFGRYPKEGMNREEVLGEPLKRWEKGMLIKPHMHDN--RQVNLGR 229

Query: 198 DGLTHNMLNDIHNHWRHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYR 257
           DG THNML  IH+HW+     +++C GVPTVDM NVC  LE+KT G+IIHR GG + L+R
Sbjct: 230 DGFTHNMLELIHSHWKRRRVCKVRCKGVPTVDMNNVCRVLEEKTGGEIIHRVGGVVYLFR 289

Query: 258 GRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNG 317
           GRNYN + RP  PLMLW+P  P+YP+LI+   +GL+ +E  E R KG ++  + KL+KNG
Sbjct: 290 GRNYNYRTRPQYPLMLWKPAAPVYPKLIQEVPEGLTKEEAHEFRVKGKSLRPICKLSKNG 349

Query: 318 YYGSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGK 362
            Y SLV  VRDAF    LV++DC GLE SDYKKIG KL++LVPC+L++FD EQI++WRG+
Sbjct: 350 VYVSLVKDVRDAFELSSLVKVDCPGLEPSDYKKIGAKLKELVPCVLLSFDDEQILMWRGR 409

[Close]
BLAST of Csa3G124850 vs. TAIR10
Match: AT3G01370.1 (AT3G01370.1 CRM family member 2)

HSP 1 Score: 63.9 bits (154), Expect = 2.5e-10
Identity = 40/140 (28.57%), Postives = 66/140 (47.14%), Query Frame = 1 

Query: 110 LDREWTGVCAPAANP-KATSVEGMEDPRLEGKRRVMREAIQGEPLPG-AERKALVEKCQK 169
           +D  W+    P   P   T++    + +   K+    E  + E +P  AE      + ++
Sbjct: 114 IDTSWSTPSYPVPKPGSGTAISRYHELKRVWKKETEMERKKEEKVPSLAELTLPPAELRR 173

Query: 170 NKT-----KRQINLGRDGLTHNMLNDIHNHWRHGEAVRIKCLGVPTVDMKNVCTQLEDKT 229
            +T      +++ +G+ G+T  ++N IH  WR  E V+I C  +  ++MK     LE KT
Sbjct: 174 LRTVGIRLTKKLKIGKAGITEGIVNGIHERWRTTEVVKIFCEDISRMNMKRTHDVLETKT 233

Query: 230 FGKIIHRHGGFLVLYRGRNY 243
            G +I R G  ++LYRG NY
Sbjct: 234 GGLVIWRSGSKILLYRGVNY 253


HSP 2 Score: 42.7 bits (99), Expect = 5.9e-04
Identity = 27/91 (29.67%), Postives = 47/91 (51.65%), Query Frame = 1 

Query: 273 LSIDETKEMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCK-GLERSDYKK 332
           L+ DE   +R+ G  +P    L +N     L   +   +  CEL +I  K G++ ++ + 
Sbjct: 378 LTDDEMTTIRRLGRPLPCHFALGRNRNLQGLAVAIVKLWEKCELAKIAVKRGVQNTNSEL 437

Query: 333 IGCKLRDLVPCILVTFDKEQIVVWRGKDYQP 363
           +  +L+ L    L++ DK+ IV++RGKD+ P
Sbjct: 438 MAEELKWLTGGTLISRDKDFIVLYRGKDFLP 468


HSP 3 Score: 31.6 bits (70), Expect = 1.4e+00
Identity = 21/70 (30.00%), Postives = 32/70 (45.71%), Query Frame = 1 

Query: 176 LGRDGLTHNMLNDIHNHWRHGEAVRIKCL-GVPTVDMKNVCTQLEDKTFGKIIHRHGGFL 235
           LGR+     +   I   W   E  +I    GV   + + +  +L+  T G +I R   F+
Sbjct: 399 LGRNRNLQGLAVAIVKLWEKCELAKIAVKRGVQNTNSELMAEELKWLTGGTLISRDKDFI 458

Query: 236 VLYRGRNYNP 245
           VLYRG+++ P
Sbjct: 459 VLYRGKDFLP 468

[Close]
BLAST of Csa3G124850 vs. NCBI nr
Match: gi|449432211|ref|XP_004133893.1| (PREDICTED: CRS2-associated factor 1, mitochondrial [Cucumis sativus])

HSP 1 Score: 820.5 bits (2118), Expect = 1.3e-234
Identity = 392/392 (100.00%), Postives = 392/392 (100.00%), Query Frame = 1 

Query: 1   MFVIRTLFRQKSISHPYTSFNPCFFYSKLRELYAFEAPPSVSPSPEPKPRSNKPPKPRYK 60
           MFVIRTLFRQKSISHPYTSFNPCFFYSKLRELYAFEAPPSVSPSPEPKPRSNKPPKPRYK
Sbjct: 1   MFVIRTLFRQKSISHPYTSFNPCFFYSKLRELYAFEAPPSVSPSPEPKPRSNKPPKPRYK 60

Query: 61  PPSSLDLGGKKPRRSNLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDREWTGVCAP 120
           PPSSLDLGGKKPRRSNLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDREWTGVCAP
Sbjct: 61  PPSSLDLGGKKPRRSNLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDREWTGVCAP 120

Query: 121 AANPKATSVEGMEDPRLEGKRRVMREAIQGEPLPGAERKALVEKCQKNKTKRQINLGRDG 180
           AANPKATSVEGMEDPRLEGKRRVMREAIQGEPLPGAERKALVEKCQKNKTKRQINLGRDG
Sbjct: 121 AANPKATSVEGMEDPRLEGKRRVMREAIQGEPLPGAERKALVEKCQKNKTKRQINLGRDG 180

Query: 181 LTHNMLNDIHNHWRHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGR 240
           LTHNMLNDIHNHWRHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGR
Sbjct: 181 LTHNMLNDIHNHWRHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGR 240

Query: 241 NYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYY 300
           NYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYY
Sbjct: 241 NYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYY 300

Query: 301 GSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKDY 360
           GSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKDY
Sbjct: 301 GSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKDY 360

Query: 361 QPLDTGYLTVRETFDDVDGNTGCVDDEVVMET 393
           QPLDTGYLTVRETFDDVDGNTGCVDDEVVMET
Sbjct: 361 QPLDTGYLTVRETFDDVDGNTGCVDDEVVMET 392

[Close]
BLAST of Csa3G124850 vs. NCBI nr
Match: gi|659075384|ref|XP_008438115.1| (PREDICTED: CRS2-associated factor 1, mitochondrial [Cucumis melo])

HSP 1 Score: 768.8 bits (1984), Expect = 4.4e-219
Identity = 369/392 (94.13%), Postives = 378/392 (96.43%), Query Frame = 1 

Query: 1   MFVIRTLFRQKSISHPYTSFNPCFFYSKLRELYAFEAPPSVSPSP-EPKPRSNKPPKPRY 60
           MFVIRT+ R+KSI  P+TSFNPC FYSKLRELYAFE P SVSPSP EPKPRSNKPPKPRY
Sbjct: 1   MFVIRTISREKSIPRPHTSFNPCSFYSKLRELYAFEFPSSVSPSPPEPKPRSNKPPKPRY 60

Query: 61  KPPSSLDLGGKKPRRSNLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDREWTGVCA 120
           KPPSSLDLG KKPRRSNLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDR+WTGVCA
Sbjct: 61  KPPSSLDLGDKKPRRSNLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDRKWTGVCA 120

Query: 121 PAANPKATSVEGMEDPRLEGKRRVMREAIQGEPLPGAERKALVEKCQKNKTKRQINLGRD 180
           PA +PKATSVEGMEDPRLE KRRVMRE +QGEPL GAERKALVEKCQKNKTKRQINLGRD
Sbjct: 121 PAVDPKATSVEGMEDPRLEEKRRVMRENLQGEPLTGAERKALVEKCQKNKTKRQINLGRD 180

Query: 181 GLTHNMLNDIHNHWRHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRG 240
           GLTHNMLNDIHNHW+HGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGG LVLYRG
Sbjct: 181 GLTHNMLNDIHNHWKHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGLLVLYRG 240

Query: 241 RNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGY 300
           RNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGY
Sbjct: 241 RNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGY 300

Query: 301 YGSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKD 360
           YGSL+PMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKD
Sbjct: 301 YGSLIPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKD 360

Query: 361 YQPLDTGYLTVRETFDDVDGNTGCVDDEVVME 392
           YQPLD GYLTVRETFDDVDGNTGCVDD+VVME
Sbjct: 361 YQPLDIGYLTVRETFDDVDGNTGCVDDKVVME 392

[Close]
BLAST of Csa3G124850 vs. NCBI nr
Match: gi|802698099|ref|XP_012083508.1| (PREDICTED: CRS2-associated factor 1, mitochondrial [Jatropha curcas])

HSP 1 Score: 583.9 bits (1504), Expect = 2.0e-163
Identity = 281/358 (78.49%), Postives = 311/358 (86.87%), Query Frame = 1 

Query: 27  SKLRELYAFEAPPSVSPSP--EPKPRSNKPPKPRYKPPSSLDLGGKKPRRSNLPFDFQYS 86
           SKL + YAF  PPS+SP     P P + K  KP Y+PPS+LD  GKKP  S+LPFDF+YS
Sbjct: 34  SKLHDHYAFRPPPSLSPQEPDNPNPTTRKKQKPLYRPPSTLDRTGKKPTHSDLPFDFRYS 93

Query: 87  YTETSPSVRPIGLREPKYSPFGPGRLDREWTGVCAPAANPKATSVEGMEDPRLEGKRRVM 146
           YTE+S SVRPIGLREPKYSPFGP RLDR WTGVCAPA +PK  S++G +DP LE KR++M
Sbjct: 94  YTESSQSVRPIGLREPKYSPFGPDRLDRSWTGVCAPAVDPKVKSLDGTDDPNLEEKRKLM 153

Query: 147 REAIQGEPLPGAERKALVEKCQKNKTKRQINLGRDGLTHNMLNDIHNHWRHGEAVRIKCL 206
           RE IQG+PL  AERK LV +CQ+NKTKRQINLGRDGLTHNMLNDIHNHW+H EAVRIKCL
Sbjct: 154 REKIQGDPLTNAERKILVAQCQRNKTKRQINLGRDGLTHNMLNDIHNHWKHAEAVRIKCL 213

Query: 207 GVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPR 266
           GVPTVDMKNVC+QLEDKTFGKIIHRH G LVLYRGRNYNPKKRP IPLM+WRPHEPIYPR
Sbjct: 214 GVPTVDMKNVCSQLEDKTFGKIIHRHCGSLVLYRGRNYNPKKRPVIPLMMWRPHEPIYPR 273

Query: 267 LIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCKGL 326
           LIKTTIDGLSIDETKEMRK+GLAVPALTKLAKNGYY SLVPMVRDAFL+ ELVRIDC+GL
Sbjct: 274 LIKTTIDGLSIDETKEMRKRGLAVPALTKLAKNGYYASLVPMVRDAFLTNELVRIDCQGL 333

Query: 327 ERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKDYQPLDTGYLTV-RETFDDVDGNT 382
           E+SDYKKIGCKLRDLVPCILVTF+KEQIVVWRGKDY+P + G L   RE FDD +G++
Sbjct: 334 EKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYKPPEDGELFADREFFDDPEGSS 391

[Close]
BLAST of Csa3G124850 vs. NCBI nr
Match: gi|645254005|ref|XP_008232837.1| (PREDICTED: CRS2-associated factor 1, mitochondrial isoform X1 [Prunus mume])

HSP 1 Score: 581.3 bits (1497), Expect = 1.3e-162
Identity = 284/368 (77.17%), Postives = 317/368 (86.14%), Query Frame = 1 

Query: 27  SKLRELYAFEAPPSVSPSPEPK-PRSNKPPK---PRYKPPSSLDLGGKKPRRSNLPFDFQ 86
           SKL + Y+F+ PPS+SP+ + + P  N P K   P+Y+PPSSLD  G+KP  S+LPFDF+
Sbjct: 26  SKLHDRYSFKPPPSLSPNTQGQNPNHNNPKKKQKPQYRPPSSLDRTGQKPIHSDLPFDFR 85

Query: 87  YSYTETSPSVRPIGLREPKYSPFGPGRLDREWTGVCAPAANPKATSVEGME-DPRLEGKR 146
           YSYTE+SP+VRPIGLREPKYSPFGPGR+DREW GVCAPA +PK  SV+G E DP+LE KR
Sbjct: 86  YSYTESSPTVRPIGLREPKYSPFGPGRIDREWIGVCAPAVDPKVRSVQGAEEDPKLEEKR 145

Query: 147 RVMREAIQGEPLPGAERKALVEKCQKNKTKRQINLGRDGLTHNMLNDIHNHWRHGEAVRI 206
           +  R+ +QGEPL  AERK LV+KCQ+ KTKRQINLGRDGLTHNMLNDI NHW+H EAVRI
Sbjct: 146 KRRRQKVQGEPLTPAERKILVDKCQRPKTKRQINLGRDGLTHNMLNDIQNHWKHDEAVRI 205

Query: 207 KCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPI 266
           KCLGVPTVDMKNVCTQLEDKTFGKIIHRHGG LVLYRGRNY PKKRP IPLMLWRPHEPI
Sbjct: 206 KCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGVLVLYRGRNYKPKKRPVIPLMLWRPHEPI 265

Query: 267 YPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLSCELVRIDC 326
           YPRLIKTTIDGLSI+ETKEMRK+GLAVPALTKLAKNGYYGSLV MVRDAF+ CELVRIDC
Sbjct: 266 YPRLIKTTIDGLSIEETKEMRKRGLAVPALTKLAKNGYYGSLVSMVRDAFICCELVRIDC 325

Query: 327 KGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKDYQPLDTGY-LTVRETFDD---- 384
           +GLE+SDYKKIGCKLRDLVPCILVTF+KEQIVVWRGKDY+PL+ GY L  RE FD+    
Sbjct: 326 QGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYKPLEDGYFLPDRELFDNPEGD 385

[Close]
BLAST of Csa3G124850 vs. NCBI nr
Match: gi|225453847|ref|XP_002272563.1| (PREDICTED: CRS2-associated factor 1, mitochondrial [Vitis vinifera])

HSP 1 Score: 579.3 bits (1492), Expect = 5.0e-162
Identity = 283/392 (72.19%), Postives = 322/392 (82.14%), Query Frame = 1 

Query: 1   MFVIRTLFRQKSISHP---------YTSFNPCFFYSKLRELYAFEAP--PSVSPSPEPKP 60
           MF++    RQ   SH           +S  P    S+L + Y+F++P  P  +P+P P+P
Sbjct: 1   MFIVTRFSRQIRQSHSAAVTLSTRRLSSSAPPSPSSRLLDHYSFKSPVSPFQNPNPNPEP 60

Query: 61  RSNKPPKPRYKPPSSLDLGGKKPRRSNLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGR 120
            + K  KP Y+PPSSLD  GKKP RS+LPFDF+YSYTE+SP+VRPIGLREPKYSPFGPG 
Sbjct: 61  STKKKQKPPYRPPSSLDRTGKKPLRSDLPFDFRYSYTESSPAVRPIGLREPKYSPFGPGL 120

Query: 121 LDREWTGVCAPAANPKATSVEGMEDPRLEGKRRVMREAIQGEPLPGAERKALVEKCQKNK 180
           LDREWTGVCAPA +PK  SV+G EDP+LE KRR MRE   GEPL  AERK LVEKCQ+++
Sbjct: 121 LDREWTGVCAPAVDPKVRSVDGKEDPKLEEKRRRMREKTLGEPLTAAERKILVEKCQRHR 180

Query: 181 TKRQINLGRDGLTHNMLNDIHNHWRHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHR 240
           TKRQINLGRDGLTHNMLNDIHNHW+H EAVRIKC+GVPTVDMKNVCTQLEDKT GK+IHR
Sbjct: 181 TKRQINLGRDGLTHNMLNDIHNHWKHAEAVRIKCMGVPTVDMKNVCTQLEDKTSGKVIHR 240

Query: 241 HGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVP 300
            GG LVLYRGRNY+PKKRP IPLMLWRPHEPIYPRLIKT IDGLSI+ETKEMRK+GLAVP
Sbjct: 241 QGGLLVLYRGRNYHPKKRPVIPLMLWRPHEPIYPRLIKTVIDGLSIEETKEMRKRGLAVP 300

Query: 301 ALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDK 360
           ALTKLAKNGYYGSLVPMVRDAFL+ EL+RIDC+GLER DYKKIGCKLRD VPCILVTF+K
Sbjct: 301 ALTKLAKNGYYGSLVPMVRDAFLTDELIRIDCQGLERRDYKKIGCKLRDFVPCILVTFEK 360

Query: 361 EQIVVWRGKDYQPLDTGYLTV-RETFDDVDGN 381
           EQIVVWRGKDY+P + G   + RE+ D+ D +
Sbjct: 361 EQIVVWRGKDYKPTEAGQFPIERESLDNWDSD 392

The following BLAST results are available for this feature:
BLAST of Csa3G124850 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CAF1M_ARATH2.3e-15171.93CRS2-associated factor 1, mitochondrial OS=Arabidopsis thaliana GN=At4g31010 PE=... [more]
CAF1M_ORYSJ1.2e-13669.39CRS2-associated factor 1, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g... [more]
CAF2M_ORYSJ4.2e-9251.48CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g... [more]
CAF2M_ARATH1.3e-9051.23CRS2-associated factor 2, mitochondrial OS=Arabidopsis thaliana GN=At5g54890 PE=... [more]
CAF1P_ARATH3.5e-8345.19CRS2-associated factor 1, chloroplastic OS=Arabidopsis thaliana GN=At2g20020 PE=... [more]
BLAST of Csa3G124850 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L906_CUCSA9.0e-235100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124850 PE=4 SV=1[more]
E6NU21_JATCU1.4e-16378.49JHL05D22.2 protein OS=Jatropha curcas GN=JHL05D22.2 PE=4 SV=1[more]
D7U7P9_VITVI3.5e-16272.19Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g01220 PE=4 SV=... [more]
A0A061DVQ3_THECC2.3e-16177.93RNA-binding CRS1 / YhbY (CRM) domain-containing protein isoform 1 OS=Theobroma c... [more]
A0A067H4T0_CITSI1.5e-16076.74Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014482mg PE=4 SV=1[more]
BLAST of Csa3G124850 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G31010.11.3e-15271.93 RNA-binding CRS1 / YhbY (CRM) domain-containing protein[more]
AT5G54890.17.5e-9251.23 RNA-binding CRS1 / YhbY (CRM) domain-containing protein[more]
AT2G20020.12.0e-8445.19 RNA-binding CRS1 / YhbY (CRM) domain-containing protein[more]
AT1G23400.11.1e-7747.52 RNA-binding CRS1 / YhbY (CRM) domain-containing protein[more]
AT3G01370.12.5e-1028.57 CRM family member 2[more]
BLAST of Csa3G124850 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449432211|ref|XP_004133893.1|1.3e-234100.00PREDICTED: CRS2-associated factor 1, mitochondrial [Cucumis sativus][more]
gi|659075384|ref|XP_008438115.1|4.4e-21994.13PREDICTED: CRS2-associated factor 1, mitochondrial [Cucumis melo][more]
gi|802698099|ref|XP_012083508.1|2.0e-16378.49PREDICTED: CRS2-associated factor 1, mitochondrial [Jatropha curcas][more]
gi|645254005|ref|XP_008232837.1|1.3e-16277.17PREDICTED: CRS2-associated factor 1, mitochondrial isoform X1 [Prunus mume][more]
gi|225453847|ref|XP_002272563.1|5.0e-16272.19PREDICTED: CRS2-associated factor 1, mitochondrial [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001890RNA-binding_CRM
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0000373 Group II intron splicing
biological_process GO:0097031 mitochondrial respiratory chain complex I biogenesis
biological_process GO:0097034 mitochondrial respiratory chain complex IV biogenesis
biological_process GO:0000956 nuclear-transcribed mRNA catabolic process
biological_process GO:0048573 photoperiodism, flowering
biological_process GO:0010048 vernalization response
biological_process GO:0008150 biological_process
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005575 cellular_component
molecular_function GO:0003723 RNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU124395cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G124850.1Csa3G124850.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU124395CU124395transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001890RNA-binding, CRM domainGENE3DG3DSA:3.30.110.60coord: 273..362
score: 4.8E-19coord: 153..247
score: 9.2
IPR001890RNA-binding, CRM domainPFAMPF01985CRS1_YhbYcoord: 275..356
score: 1.0E-10coord: 153..238
score: 9.0
IPR001890RNA-binding, CRM domainSMARTSM01103CRS1_YhbY_2coord: 153..238
score: 9.1E-20coord: 273..356
score: 2.3
IPR001890RNA-binding, CRM domainPROFILEPS51295CRMcoord: 271..367
score: 16.562coord: 151..249
score: 19
IPR001890RNA-binding, CRM domainunknownSSF75471YhbY-likecoord: 273..362
score: 3.53E-19coord: 152..248
score: 6.02
NoneNo IPR availablePANTHERPTHR31846FAMILY NOT NAMEDcoord: 27..378
score: 3.5E
NoneNo IPR availablePANTHERPTHR31846:SF9CRS2-ASSOCIATED FACTOR 1, MITOCHONDRIALcoord: 27..378
score: 3.5E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G124850Cla021279Watermelon (97103) v1cuwmB233
Csa3G124850MELO3C006157Melon (DHL92) v3.5.1cumeB236
Csa3G124850ClCG05G001970Watermelon (Charleston Gray)cuwcgB222
Csa3G124850Lsi05G019930Bottle gourd (USVL1VR-Ls)culsiB209
Csa3G124850MELO3C006157.2Melon (DHL92) v3.6.1cumedB223
Csa3G124850Cla97C05G082410Watermelon (97103) v2cuwmbB204
Csa3G124850Bhi01G000220Wax gourdcuwgoB287
Csa3G124850CSPI03G09260Wild cucumber (PI 183967)cpicuB120
Csa3G124850Cucsa.257930Cucumber (Gy14) v1cgycuB366
Csa3G124850CmaCh14G020010Cucurbita maxima (Rimu)cmacuB253
Csa3G124850CmoCh14G020620Cucurbita moschata (Rifu)cmocuB239
Csa3G124850Cp4.1LG03g16890Cucurbita pepo (Zucchini)cpecuB609
Csa3G124850CsGy3G009340Cucumber (Gy14) v2cgybcuB109
Csa3G124850Carg14813Silver-seed gourdcarcuB0644
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G124850Watermelon (97103) v2cuwmbB175
Csa3G124850Watermelon (97103) v2cuwmbB227
Csa3G124850Cucumber (Chinese Long) v2cucuB096
Csa3G124850Cucumber (Chinese Long) v2cucuB111
Csa3G124850Cucumber (Gy14) v1cgycuB432
Csa3G124850Cucumber (Gy14) v1cgycuB509
Csa3G124850Cucurbita maxima (Rimu)cmacuB814
Csa3G124850Cucurbita maxima (Rimu)cmacuB888
Csa3G124850Cucurbita moschata (Rifu)cmocuB806
Csa3G124850Cucurbita moschata (Rifu)cmocuB875
Csa3G124850Melon (DHL92) v3.5.1cumeB182
Csa3G124850Watermelon (Charleston Gray)cuwcgB242
Csa3G124850Watermelon (97103) v1cuwmB276
Csa3G124850Cucurbita pepo (Zucchini)cpecuB313
Csa3G124850Cucurbita pepo (Zucchini)cpecuB859
Csa3G124850Bottle gourd (USVL1VR-Ls)culsiB154
Csa3G124850Cucumber (Gy14) v2cgybcuB207
Csa3G124850Cucumber (Gy14) v2cgybcuB256
Csa3G124850Melon (DHL92) v3.6.1cumedB167
Csa3G124850Silver-seed gourdcarcuB0518
Csa3G124850Silver-seed gourdcarcuB0951
Csa3G124850Silver-seed gourdcarcuB1094