CSPI03G09260 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G09260
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionCRS2-associated factor 1
LocationChr3 : 7553637 .. 7556544 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTCAACGACTAAAAACCTAATTTAGTCGAGGGGGAAAATAGAAAGAAAAAACCGCCAATTTTATTCTCTTCGATTATTCGCCGATAAACCCTAAACCCTTTCCGGTGCTTTGTCAGTGTTCATCAATGCTCAATCTGCCTCATGTTCGTCATCAGAACACTTTTCCGCCAAAAATCAATTTCTCATCCTTATACATCTTTCAACCCATGTTTCTTCTACTCCAAACTCCGCGAACTCTACGCATTTGAAGCCCCACCTTCGGTTTCCCCATCGCCGGAGCCCAAACCCCGCTCAAACAAACCTCCGAAGCCGCGGTACAAGCCGCCGTCGTCGCTCGATCTTGGCGGCAAGAAGCCAAGGCGTTCAAATTTGCCGTTTGATTTCCAGTACAGTTACACAGAGACTAGTCCCTCTGTGAGGCCTATTGGGCTTCGAGAACCGAAGTATTCGCCGTTTGGTCCTGGCCGACTTGATCGGGAATGGACTGGGGTGTGTGCCCCGGCGGCGAACCCGAAGGCGACCTCTGTAGAAGGCATGGAAGATCCAAGACTGGAAGGAAAGAGGAGGGTCATGAGAGAGGCTATTCAAGGGGAGCCATTGACAGGAGCCGAGAGAAAGGCCTTGGTGGAGAAATGTCAAAAGAATAAAACAAAGAGGCAGATTAATTTGGGTATGTGATTTTATGGGGCCTGCTAGCTTCAAAGATCGGAAATTTTATGATTTTGTTCCAAATTTTGTGGAATTGTGGTGAAAGTATTTGAAAATTTAGGCGACCGTGTGGTTGTTTCTTTCCATCCTTTTAATGGGTTGTTCAATGTTTGTCTTGTAATCTGCAAGTTATTTTGTTACCTTGGTATTTTTGCTGTATTAGACTATTGTGTTTGATTTTCTCAAAATTAGAGTCTGTACTCTGGAGTAGTATTCAAGAAAAAATAATATTTGAACTAACGAATGGGCATTGTTATACTTGTTTATTAGCATACATGTAAATGATGTTATTTTTGTAATTTTTTGTTTTTCTTTTGTCATTTCAATGGTAGATTACCATTCCAACTCCTCATTCCGATGTTTGAACCACGAGGTTTAGGGAAATATTGACATGTTGGTAGATATTTTATTATATCATGAACCCTTTATTTTGTGGCATTATCTCTGATAAGTTGATTTTGTATGTTGAAATCGAATAGCAAAGCATCTCAGATATTATATGTATGTTGGGCATTCCTTTGCGGAAGCTTCATTAATCTATCGTTTGATTTAAAGTTGTAGGTCTTGAAATAGTTCGAGGAACTTTAGATACCTGGAAATTGTTTATATTTCTGCATTATTTCACTATTTGGTTCTTACCCTCGATGAAAAAAATACTGAGGTGGATGATAAGATCGGTGGTCTGGTATAGAGGATGGTGTTTCCTCATCATCTTTAATTAACCGGTGCTACATGGATATTGAAAATATCTTATTTTCTGTGCCTATATTACTGAGAAATCTTATAATATGATCCCTATATGACTAGCTCTATAGTAGTAATTGCATTTTTTTTTCTATGTGGTTGTAGGAAGAGATGGTTTGACCCACAATATGTTGAATGATATTCATAATCACTGGAGACATGGTGAAGCAGTGAGGATCAAATGTCTAGGAGTTCCCACTGTAGATATGAAAAACGTGTGCACGCAACTTGAGGTATGGTTTTCGTTTCTTTGGCTGGAATCATCTTGCTTTAGATACAAGTTTTTAGTTTTTCATTTCTTAAGTTATATTGGCTTGCATTCCACAAATTATATCAACTAATTAAAAATATTTTTTGAGTCACTCACACCCTTTGGCACTTTTCTTAATGTCCGTTTACTTCAAGCTTTGTTCATGATTGCAGGACAAGACATTTGGAAAGATCATTCATAGGCATGGTGGTTTTCTTGTTCTATACAGAGGGAGGAACTATAATCCCAAGAAAAGGCCATTCATTCCTTTAATGTTATGGAGACCCCATGAACCTATATATCCCAGGCTGATTAAAACTACGATTGATGGACTAAGCATCGATGAAACAAAAGAAATGAGAAAGAAAGGACTAGCTGTTCCTGCTTTGACAAAGCTTGGTATGTGTTTGAGAACCTTTTTTTGTAAAACTTCTTTCCACTAATTATCGTATTATCACGAGGTCATTAACTATCACATGATATCTGTGGATTTTAGCAAAGAATGGTTACTATGGTAGTTTAGTACCCATGGTTCGAGATGCTTTTCTCTCCTGTGAGTTGGTTCGAATTGACTGTAAAGGCCTTGAGAGGAGTGATTACAAGAAAATTGGCTGCAAGCTTCGGGTAATGGCCATGCCCTTCATGCCTTTACATAACTATTCTTCAATTCTTAAATCTTATAAAGCAAAGAGCCTTATAATATGTGCCATGACATGAGTGTTGTTATCCGATCACCATTTTTCATGGCTAAATTATTTCCATTTTTGATCAACTTTATTTTCTTGAATCAGGACCTCGTGCCTTGTATCTTGGTGACATTTGATAAGGAGCAGATTGTAGTTTGGAGGGGCAAGGATTACCAGCCCTTAGACACTGGTTATCTTACAGTCAGAGAGACCTTTGATGATGTTGATGGGAATACAGGTTGTGTTGACGATGAGGTCGTGATGGAGACATGAACATCGATTACTGTGATGCGGGCTTTCATTCTGGTAACAGTGACAGTGAGTAGTTTCTTGGTTGCTTCATATCACATCCAAATCATTCTGCCAAAATAATATTATGATCCTTTTCGCCTGAAGATTGACCCATATAACATATTCTTTTCCCATATCTTCTGTTTGCCTTATTCTCATGCTCTTCCAGGGAAGAAGTGAAAATCTTGTTCGGAGATTCAAACGTCTAATTTTTTGGTCAAAGGTAC

mRNA sequence

ATGTTCGTCATCAGAACACTTTTCCGCCAAAAATCAATTTCTCATCCTTATACATCTTTCAACCCATGTTTCTTCTACTCCAAACTCCGCGAACTCTACGCATTTGAAGCCCCACCTTCGGTTTCCCCATCGCCGGAGCCCAAACCCCGCTCAAACAAACCTCCGAAGCCGCGGTACAAGCCGCCGTCGTCGCTCGATCTTGGCGGCAAGAAGCCAAGGCGTTCAAATTTGCCGTTTGATTTCCAGTACAGTTACACAGAGACTAGTCCCTCTGTGAGGCCTATTGGGCTTCGAGAACCGAAGTATTCGCCGTTTGGTCCTGGCCGACTTGATCGGGAATGGACTGGGGTGTGTGCCCCGGCGGCGAACCCGAAGGCGACCTCTGTAGAAGGCATGGAAGATCCAAGACTGGAAGGAAAGAGGAGGGTCATGAGAGAGGCTATTCAAGGGGAGCCATTGACAGGAGCCGAGAGAAAGGCCTTGGTGGAGAAATGTCAAAAGAATAAAACAAAGAGGCAGATTAATTTGGGAAGAGATGGTTTGACCCACAATATGTTGAATGATATTCATAATCACTGGAGACATGGTGAAGCAGTGAGGATCAAATGTCTAGGAGTTCCCACTGTAGATATGAAAAACGTGTGCACGCAACTTGAGGACAAGACATTTGGAAAGATCATTCATAGGCATGGTGGTTTTCTTGTTCTATACAGAGGGAGGAACTATAATCCCAAGAAAAGGCCATTCATTCCTTTAATGTTATGGAGACCCCATGAACCTATATATCCCAGGCTGATTAAAACTACGATTGATGGACTAAGCATCGATGAAACAAAAGAAATGAGAAAGAAAGGACTAGCTGTTCCTGCTTTGACAAAGCTTGCAAAGAATGGTTACTATGGTAGTTTAGTACCCATGGTTCGAGATGCTTTTCTCTCCTGTGAGTTGGTTCGAATTGACTGTAAAGGCCTTGAGAGGAGTGATTACAAGAAAATTGGCTGCAAGCTTCGGGACCTCGTGCCTTGTATCTTGGTGACATTTGATAAGGAGCAGATTGTAGTTTGGAGGGGCAAGGATTACCAGCCCTTAGACACTGGTTATCTTACAGTCAGAGAGACCTTTGATGATGTTGATGGGAATACAGGTTGTGTTGACGATGAGGTCGTGATGGAGACATGA

Coding sequence (CDS)

ATGTTCGTCATCAGAACACTTTTCCGCCAAAAATCAATTTCTCATCCTTATACATCTTTCAACCCATGTTTCTTCTACTCCAAACTCCGCGAACTCTACGCATTTGAAGCCCCACCTTCGGTTTCCCCATCGCCGGAGCCCAAACCCCGCTCAAACAAACCTCCGAAGCCGCGGTACAAGCCGCCGTCGTCGCTCGATCTTGGCGGCAAGAAGCCAAGGCGTTCAAATTTGCCGTTTGATTTCCAGTACAGTTACACAGAGACTAGTCCCTCTGTGAGGCCTATTGGGCTTCGAGAACCGAAGTATTCGCCGTTTGGTCCTGGCCGACTTGATCGGGAATGGACTGGGGTGTGTGCCCCGGCGGCGAACCCGAAGGCGACCTCTGTAGAAGGCATGGAAGATCCAAGACTGGAAGGAAAGAGGAGGGTCATGAGAGAGGCTATTCAAGGGGAGCCATTGACAGGAGCCGAGAGAAAGGCCTTGGTGGAGAAATGTCAAAAGAATAAAACAAAGAGGCAGATTAATTTGGGAAGAGATGGTTTGACCCACAATATGTTGAATGATATTCATAATCACTGGAGACATGGTGAAGCAGTGAGGATCAAATGTCTAGGAGTTCCCACTGTAGATATGAAAAACGTGTGCACGCAACTTGAGGACAAGACATTTGGAAAGATCATTCATAGGCATGGTGGTTTTCTTGTTCTATACAGAGGGAGGAACTATAATCCCAAGAAAAGGCCATTCATTCCTTTAATGTTATGGAGACCCCATGAACCTATATATCCCAGGCTGATTAAAACTACGATTGATGGACTAAGCATCGATGAAACAAAAGAAATGAGAAAGAAAGGACTAGCTGTTCCTGCTTTGACAAAGCTTGCAAAGAATGGTTACTATGGTAGTTTAGTACCCATGGTTCGAGATGCTTTTCTCTCCTGTGAGTTGGTTCGAATTGACTGTAAAGGCCTTGAGAGGAGTGATTACAAGAAAATTGGCTGCAAGCTTCGGGACCTCGTGCCTTGTATCTTGGTGACATTTGATAAGGAGCAGATTGTAGTTTGGAGGGGCAAGGATTACCAGCCCTTAGACACTGGTTATCTTACAGTCAGAGAGACCTTTGATGATGTTGATGGGAATACAGGTTGTGTTGACGATGAGGTCGTGATGGAGACATGA
Homology
[Close]
BLAST of CSPI03G09260 vs. Swiss-Prot
Match: CAF1M_ARATH (CRS2-associated factor 1, mitochondrial OS=Arabidopsis thaliana GN=At4g31010 PE=2 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 5.2e-151
Identity = 265/367 (72.21%), Postives = 302/367 (82.29%), Query Frame = 1 

Query: 27  SKLRELYAFEAPPSVSPSPEPKPRSN------KPPKPRYKPPSSLDLGGKKPRRSNLPFD 86
           S+LR+LY F++PP +S S    P  N      K PKP+Y+PPSSL+  G K   S+LPFD
Sbjct: 29  SRLRDLYNFQSPPPLSSSASENPDFNQKNNNKKKPKPQYRPPSSLE--GVKTVHSDLPFD 88

Query: 87  FQYSYTETSPSVRPIGLREPKYSPFGPGRLDREWTGVCAPAANPKATSVEGMEDPRLEGK 146
           F++SYTE+  +VRPIGLREPKYSPFGP RLDREWTGVCAPA NPK  SV+G+EDP+LE K
Sbjct: 89  FRFSYTESCSNVRPIGLREPKYSPFGPDRLDREWTGVCAPAVNPKVESVDGVEDPKLEEK 148

Query: 147 RRVMREAIQGEPLTGAERKALVEKCQKNKTKRQINLGRDGLTHNMLNDIHNHWRHGEAVR 206
           RR +RE IQG  LT AERK LVE CQ+NKTKRQ+NLGRDGLTHNMLND++NHW+H EAVR
Sbjct: 149 RRKVREKIQGASLTEAERKFLVELCQRNKTKRQVNLGRDGLTHNMLNDVYNHWKHAEAVR 208

Query: 207 IKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEP 266
           +KCLGVPT+DMKNV   LEDKTFG+++ +H G LVLYRGRNY+PKKRP IPLMLW+PHEP
Sbjct: 209 VKCLGVPTLDMKNVIFHLEDKTFGQVVSKHSGTLVLYRGRNYDPKKRPKIPLMLWKPHEP 268

Query: 267 IYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLSCELVRID 326
           +YPRLIKTTIDGLSIDETK MRKKGLAVPALTKLAKNGYYGSLVPMVRDAFL  ELVRID
Sbjct: 269 VYPRLIKTTIDGLSIDETKAMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLVSELVRID 328

Query: 327 CKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKDYQP--LDTGYLTV--RETFDD 384
           C GLER DYKKIG KLRDLVPCILVTFDKEQ+V+WRGKDY+P   D  Y +   RE+  D
Sbjct: 329 CLGLERKDYKKIGAKLRDLVPCILVTFDKEQVVIWRGKDYKPPKEDDEYSSFIHRESSID 388

[Close]
BLAST of CSPI03G09260 vs. Swiss-Prot
Match: CAF1M_ORYSJ (CRS2-associated factor 1, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g0174900 PE=3 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 3.6e-136
Identity = 239/343 (69.68%), Postives = 277/343 (80.76%), Query Frame = 1 

Query: 27  SKLRELYAFEAPPSVSP---SPEPKPRSNKPPKPRYKPPSSLDLGGKKPRRSNLPFDFQY 86
           S L + Y F  P S++P   S +   +  +P KP Y+PPSSLD GG+   RS+LPFDF++
Sbjct: 23  SGLLDRYGFVPPASLTPHSASDDGGAKKRRPKKPPYRPPSSLDRGGRPAARSDLPFDFRF 82

Query: 87  SYTETSPSVRPIGLREPKYSPFGPGRLDREWTGVCAPAANPKATSVEGMEDP------RL 146
           SYTE+SP  +PIGLREPKYSPFGPGRLDR WTG+CAPA +         +DP       L
Sbjct: 83  SYTESSPGDKPIGLREPKYSPFGPGRLDRPWTGLCAPAVDTTLRDAHA-DDPAPAAEREL 142

Query: 147 EGKRRVMREAIQGEPLTGAERKALVEKCQKNKTKRQINLGRDGLTHNMLNDIHNHWRHGE 206
           E  RR  RE + GEPLT AER  LV KCQK++TK+QINLGRDGLTHNMLNDIHNHW++ E
Sbjct: 143 EEARRRERERVLGEPLTPAERAFLVSKCQKSRTKKQINLGRDGLTHNMLNDIHNHWKNDE 202

Query: 207 AVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRP 266
           AVR+KCLGVPTVDM+NVC QLEDKT G IIHRHGG L+LYRGR+YNPKKRP IPLMLW+P
Sbjct: 203 AVRVKCLGVPTVDMQNVCHQLEDKTGGLIIHRHGGQLILYRGRHYNPKKRPVIPLMLWKP 262

Query: 267 HEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLSCELV 326
            EP+YPRLIKTTI+GL+++ETKEMRKKGL VP LTKLAKNGYY SLVPMVRDAFL+ ELV
Sbjct: 263 AEPVYPRLIKTTIEGLTVEETKEMRKKGLYVPVLTKLAKNGYYASLVPMVRDAFLTDELV 322

Query: 327 RIDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKDY 361
           RID KGL +SDY+KIG KLRDLVPCI+V+FDKEQI+VWRGKDY
Sbjct: 323 RIDSKGLPKSDYRKIGVKLRDLVPCIIVSFDKEQIIVWRGKDY 364

[Close]
BLAST of CSPI03G09260 vs. Swiss-Prot
Match: CAF2M_ORYSJ (CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g0188000 PE=2 SV=2)

HSP 1 Score: 336.3 bits (861), Expect = 4.6e-91
Identity = 174/338 (51.48%), Postives = 224/338 (66.27%), Query Frame = 1 

Query: 30  RELYAFEAPPSVSPSPEPK--PRSNKPPKP--RYKPPSSLDLGGK----KPRRSNLPFDF 89
           R L    APP   P  +P     + +PP+   + K     D GG+    +P  S+LPFDF
Sbjct: 24  RRLNHHRAPPFSDPDDDPPFTRLAERPPRAPSKKKKKEEEDQGGRIRPPEPASSDLPFDF 83

Query: 90  QYSYTETSPSVRPIGLREP-KYSPFGPGRLDREWTGVCAPAANPKATSVEGMEDPRLEGK 149
           +YSY+ET P+ RPIG REP ++SPFGPGRLDR W GV A AA  +             G 
Sbjct: 84  RYSYSETDPAWRPIGFREPTRFSPFGPGRLDRPWDGVAAAAARGEGA-----------GA 143

Query: 150 RRVMREAIQGEPLTGAERKALVEKCQKNKTKRQINLGRDGLTHNMLNDIHNHWRHGEAVR 209
               RE + GEPL   E   LVE+ + +   RQINLG+ G+THNM++DIHNHW+  EAVR
Sbjct: 144 AATSREEVLGEPLAEEEVAQLVERYRHSDCSRQINLGKGGVTHNMIDDIHNHWKRAEAVR 203

Query: 210 IKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEP 269
           IKCLGVPT+DM N+C  LEDKT GK+I+R+   L+LYRGRNY+PK+RP IPLMLW+P  P
Sbjct: 204 IKCLGVPTLDMDNICFHLEDKTGGKVIYRNINILILYRGRNYDPKQRPQIPLMLWKPLAP 263

Query: 270 IYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLSCELVRID 329
           IYPRL++   DGL+ ++TKE+R  GL    L KL +NG Y ++V  VR+AF + E+VR+D
Sbjct: 264 IYPRLVQNVADGLTFEKTKELRNTGLNSSPLMKLTRNGVYVNVVDRVREAFKTVEVVRLD 323

Query: 330 CKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGK 359
           C  +  SD KKIG KLRDLVPC+ + F  EQI++WRGK
Sbjct: 324 CSHVGSSDCKKIGVKLRDLVPCVPLLFKDEQIILWRGK 350

[Close]
BLAST of CSPI03G09260 vs. Swiss-Prot
Match: CAF2M_ARATH (CRS2-associated factor 2, mitochondrial OS=Arabidopsis thaliana GN=At5g54890 PE=2 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 2.3e-90
Identity = 168/326 (51.53%), Postives = 224/326 (68.71%), Query Frame = 1 

Query: 35  FEAPPSVSPSPEPKPRSNKPPKPRYKPPSSLDLGGKK-PRRSNLPFDFQYSYTETSPSVR 94
           ++ P S    P   P+  K  K + +  SS  +   K P  S+LPFDF+YSY+ET+P + 
Sbjct: 34  YDPPFSPLSKPTKPPKEKKKQKTKKQDQSSELVNDLKIPVISDLPFDFRYSYSETNPEIE 93

Query: 95  PIGLREPK-YSPFGPGRLDREWTGVCAPAANPKATSVEGMEDPRLEGKRRVMREAIQGEP 154
           PIG REPK +SPFGPGRLDR+WTG  A  A+P+    + +E+          R  + GE 
Sbjct: 94  PIGFREPKRFSPFGPGRLDRKWTGTTA-LASPEIDQSQWVEE----------RARVLGET 153

Query: 155 LTGAERKALVEKCQKNKTKRQINLGRDGLTHNMLNDIHNHWRHGEAVRIKCLGVPTVDMK 214
           LT  E   L+E+ + +   RQINLG+ G+THNM++DIHNHW+  EAVRIKCLGVPT+DM 
Sbjct: 154 LTEDEVTELIERYRHSDCTRQINLGKGGVTHNMIDDIHNHWKKAEAVRIKCLGVPTLDMD 213

Query: 215 NVCTQLEDKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDG 274
           N+C  LE+K+ GKI++R+   LVLYRGRNY+PK RP IPLMLW+PH PIYPRL+K   DG
Sbjct: 214 NICFHLEEKSGGKIVYRNINILVLYRGRNYDPKSRPIIPLMLWKPHPPIYPRLVKNVADG 273

Query: 275 LSIDETKEMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCKGLERSDYKKI 334
           L  +ETKEMR +GL  PAL KL +NG Y ++V  VR+ F + E+VR+DC  +  SD K+I
Sbjct: 274 LEFEETKEMRNRGLHSPALMKLTRNGVYVNVVGRVREEFETEEIVRLDCTHVGMSDCKRI 333

Query: 335 GCKLRDLVPCILVTFDKEQIVVWRGK 359
           G KL+++VPC+ + F  EQI++WRGK
Sbjct: 334 GVKLKEMVPCVPILFKDEQIILWRGK 348

[Close]
BLAST of CSPI03G09260 vs. Swiss-Prot
Match: CAF1P_ARATH (CRS2-associated factor 1, chloroplastic OS=Arabidopsis thaliana GN=At2g20020 PE=2 SV=2)

HSP 1 Score: 308.5 bits (789), Expect = 1.0e-82
Identity = 170/374 (45.45%), Postives = 230/374 (61.50%), Query Frame = 1 

Query: 35  FEAPPSVSPSPEPKPR-SNKPPKPRYKPPSSLDLGGKKPRRSNLPFDFQYSYTETSPSVR 94
           +  P S    P+ KPR  + PP+   KP   L   G     +  PF+F+YSYTET P V+
Sbjct: 106 YSKPDSGPNRPKNKPRVPDSPPQLDAKPEVKLSEDGLTYVINGAPFEFKYSYTET-PKVK 165

Query: 95  PIGLREPKYSPFGPGRLDREWTGVCAPAANPKATSVE------------GMEDPRLEGKR 154
           P+ LREP Y+PFGP  + R WTG  AP    + T  E            G++  +  G  
Sbjct: 166 PLKLREPAYAPFGPTTMGRPWTGR-APLPQSQKTPREFDSFRLPPVGKKGLKPVQKPGPF 225

Query: 155 R--------VMREAIQGEPLTGAERKALVEKCQKNKTKRQINLGRDGLTHNMLNDIHNHW 214
           R          +E I GEPLT  E + LV  C K  T RQ+N+GRDGLTHNMLN+IH+ W
Sbjct: 226 RPGVGPRYVYSKEEILGEPLTKEEVRELVTSCLK--TTRQLNMGRDGLTHNMLNNIHDLW 285

Query: 215 RHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLM 274
           +     +IKC GV TVDM NVC QLE+K  GK+I+R GG L L+RGRNYN + RP  PLM
Sbjct: 286 KRRRVCKIKCKGVCTVDMDNVCEQLEEKIGGKVIYRRGGVLFLFRGRNYNHRTRPRFPLM 345

Query: 275 LWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLS 334
           LW+P  P+YPRLI+   +GL+  E   MR+KG  +  + KL KNG Y  LV  V++AF  
Sbjct: 346 LWKPVAPVYPRLIQQVPEGLTRQEATNMRRKGRELMPICKLGKNGVYCDLVKNVKEAFEV 405

Query: 335 CELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKDYQPLDTGYLTVRET 388
           CELVRIDC+G++ SD++KIG KL+DLVPC+LV+F+ EQI++WRG++++   T      + 
Sbjct: 406 CELVRIDCQGMKGSDFRKIGAKLKDLVPCVLVSFENEQILIWRGREWKSSLTTPDKKGDI 465

[Close]
BLAST of CSPI03G09260 vs. TrEMBL
Match: A0A0A0L906_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124850 PE=4 SV=1)

HSP 1 Score: 813.5 bits (2100), Expect = 1.1e-232
Identity = 391/392 (99.74%), Postives = 391/392 (99.74%), Query Frame = 1 

Query: 1   MFVIRTLFRQKSISHPYTSFNPCFFYSKLRELYAFEAPPSVSPSPEPKPRSNKPPKPRYK 60
           MFVIRTLFRQKSISHPYTSFNPCFFYSKLRELYAFEAPPSVSPSPEPKPRSNKPPKPRYK
Sbjct: 1   MFVIRTLFRQKSISHPYTSFNPCFFYSKLRELYAFEAPPSVSPSPEPKPRSNKPPKPRYK 60

Query: 61  PPSSLDLGGKKPRRSNLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDREWTGVCAP 120
           PPSSLDLGGKKPRRSNLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDREWTGVCAP
Sbjct: 61  PPSSLDLGGKKPRRSNLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDREWTGVCAP 120

Query: 121 AANPKATSVEGMEDPRLEGKRRVMREAIQGEPLTGAERKALVEKCQKNKTKRQINLGRDG 180
           AANPKATSVEGMEDPRLEGKRRVMREAIQGEPL GAERKALVEKCQKNKTKRQINLGRDG
Sbjct: 121 AANPKATSVEGMEDPRLEGKRRVMREAIQGEPLPGAERKALVEKCQKNKTKRQINLGRDG 180

Query: 181 LTHNMLNDIHNHWRHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGR 240
           LTHNMLNDIHNHWRHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGR
Sbjct: 181 LTHNMLNDIHNHWRHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGR 240

Query: 241 NYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYY 300
           NYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYY
Sbjct: 241 NYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYY 300

Query: 301 GSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKDY 360
           GSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKDY
Sbjct: 301 GSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKDY 360

Query: 361 QPLDTGYLTVRETFDDVDGNTGCVDDEVVMET 393
           QPLDTGYLTVRETFDDVDGNTGCVDDEVVMET
Sbjct: 361 QPLDTGYLTVRETFDDVDGNTGCVDDEVVMET 392

[Close]
BLAST of CSPI03G09260 vs. TrEMBL
Match: E6NU21_JATCU (JHL05D22.2 protein OS=Jatropha curcas GN=JHL05D22.2 PE=4 SV=1)

HSP 1 Score: 582.8 bits (1501), Expect = 3.1e-163
Identity = 282/358 (78.77%), Postives = 312/358 (87.15%), Query Frame = 1 

Query: 27  SKLRELYAFEAPPSVSPSP--EPKPRSNKPPKPRYKPPSSLDLGGKKPRRSNLPFDFQYS 86
           SKL + YAF  PPS+SP     P P + K  KP Y+PPS+LD  GKKP  S+LPFDF+YS
Sbjct: 34  SKLHDHYAFRPPPSLSPQEPDNPNPTTRKKQKPLYRPPSTLDRTGKKPTHSDLPFDFRYS 93

Query: 87  YTETSPSVRPIGLREPKYSPFGPGRLDREWTGVCAPAANPKATSVEGMEDPRLEGKRRVM 146
           YTE+S SVRPIGLREPKYSPFGP RLDR WTGVCAPA +PK  S++G +DP LE KR++M
Sbjct: 94  YTESSQSVRPIGLREPKYSPFGPDRLDRSWTGVCAPAVDPKVKSLDGTDDPNLEEKRKLM 153

Query: 147 REAIQGEPLTGAERKALVEKCQKNKTKRQINLGRDGLTHNMLNDIHNHWRHGEAVRIKCL 206
           RE IQG+PLT AERK LV +CQ+NKTKRQINLGRDGLTHNMLNDIHNHW+H EAVRIKCL
Sbjct: 154 REKIQGDPLTNAERKILVAQCQRNKTKRQINLGRDGLTHNMLNDIHNHWKHAEAVRIKCL 213

Query: 207 GVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPR 266
           GVPTVDMKNVC+QLEDKTFGKIIHRH G LVLYRGRNYNPKKRP IPLM+WRPHEPIYPR
Sbjct: 214 GVPTVDMKNVCSQLEDKTFGKIIHRHCGSLVLYRGRNYNPKKRPVIPLMMWRPHEPIYPR 273

Query: 267 LIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCKGL 326
           LIKTTIDGLSIDETKEMRK+GLAVPALTKLAKNGYY SLVPMVRDAFL+ ELVRIDC+GL
Sbjct: 274 LIKTTIDGLSIDETKEMRKRGLAVPALTKLAKNGYYASLVPMVRDAFLTNELVRIDCQGL 333

Query: 327 ERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKDYQPLDTGYLTV-RETFDDVDGNT 382
           E+SDYKKIGCKLRDLVPCILVTF+KEQIVVWRGKDY+P + G L   RE FDD +G++
Sbjct: 334 EKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYKPPEDGELFADREFFDDPEGSS 391

[Close]
BLAST of CSPI03G09260 vs. TrEMBL
Match: D7U7P9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g01220 PE=4 SV=1)

HSP 1 Score: 577.8 bits (1488), Expect = 1.0e-161
Identity = 284/392 (72.45%), Postives = 323/392 (82.40%), Query Frame = 1 

Query: 1   MFVIRTLFRQKSISHP---------YTSFNPCFFYSKLRELYAFEAP--PSVSPSPEPKP 60
           MF++    RQ   SH           +S  P    S+L + Y+F++P  P  +P+P P+P
Sbjct: 1   MFIVTRFSRQIRQSHSAAVTLSTRRLSSSAPPSPSSRLLDHYSFKSPVSPFQNPNPNPEP 60

Query: 61  RSNKPPKPRYKPPSSLDLGGKKPRRSNLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGR 120
            + K  KP Y+PPSSLD  GKKP RS+LPFDF+YSYTE+SP+VRPIGLREPKYSPFGPG 
Sbjct: 61  STKKKQKPPYRPPSSLDRTGKKPLRSDLPFDFRYSYTESSPAVRPIGLREPKYSPFGPGL 120

Query: 121 LDREWTGVCAPAANPKATSVEGMEDPRLEGKRRVMREAIQGEPLTGAERKALVEKCQKNK 180
           LDREWTGVCAPA +PK  SV+G EDP+LE KRR MRE   GEPLT AERK LVEKCQ+++
Sbjct: 121 LDREWTGVCAPAVDPKVRSVDGKEDPKLEEKRRRMREKTLGEPLTAAERKILVEKCQRHR 180

Query: 181 TKRQINLGRDGLTHNMLNDIHNHWRHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHR 240
           TKRQINLGRDGLTHNMLNDIHNHW+H EAVRIKC+GVPTVDMKNVCTQLEDKT GK+IHR
Sbjct: 181 TKRQINLGRDGLTHNMLNDIHNHWKHAEAVRIKCMGVPTVDMKNVCTQLEDKTSGKVIHR 240

Query: 241 HGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVP 300
            GG LVLYRGRNY+PKKRP IPLMLWRPHEPIYPRLIKT IDGLSI+ETKEMRK+GLAVP
Sbjct: 241 QGGLLVLYRGRNYHPKKRPVIPLMLWRPHEPIYPRLIKTVIDGLSIEETKEMRKRGLAVP 300

Query: 301 ALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDK 360
           ALTKLAKNGYYGSLVPMVRDAFL+ EL+RIDC+GLER DYKKIGCKLRD VPCILVTF+K
Sbjct: 301 ALTKLAKNGYYGSLVPMVRDAFLTDELIRIDCQGLERRDYKKIGCKLRDFVPCILVTFEK 360

Query: 361 EQIVVWRGKDYQPLDTGYLTV-RETFDDVDGN 381
           EQIVVWRGKDY+P + G   + RE+ D+ D +
Sbjct: 361 EQIVVWRGKDYKPTEAGQFPIERESLDNWDSD 392

[Close]
BLAST of CSPI03G09260 vs. TrEMBL
Match: A0A061DVQ3_THECC (RNA-binding CRS1 / YhbY (CRM) domain-containing protein isoform 1 OS=Theobroma cacao GN=TCM_005454 PE=4 SV=1)

HSP 1 Score: 573.9 bits (1478), Expect = 1.5e-160
Identity = 279/358 (77.93%), Postives = 311/358 (86.87%), Query Frame = 1 

Query: 27  SKLRELYAFEAPPSVSPSPE---PKPRSNKPPKPRYKPPSSLDLGGKKPRRSNLPFDFQY 86
           SKLR+ Y+F+ PPS+SP+P+   P P  NK  KP+Y+P SSLD    KP  S+L FDF++
Sbjct: 32  SKLRDHYSFQPPPSLSPNPQNTTPNPNLNKKQKPKYRPASSLDR--IKPTHSDLAFDFRF 91

Query: 87  SYTETSPSVRPIGLREPKYSPFGPGRLDREWTGVCAPAANPKATSVEGMEDPRLEGKRRV 146
           SYTE+SP+VRPIGLREPKYSPFGPGRLDREWTGVCAPA +PK  SV+G EDP+LE KRR+
Sbjct: 92  SYTESSPTVRPIGLREPKYSPFGPGRLDREWTGVCAPAVDPKVKSVDGSEDPKLEEKRRL 151

Query: 147 MREAIQGEPLTGAERKALVEKCQKNKTKRQINLGRDGLTHNMLNDIHNHWRHGEAVRIKC 206
           +RE IQG PL  AERK LV KCQ+NKTKRQINLGRDGLTHNMLNDIHNHW + EAVRIKC
Sbjct: 152 LRERIQGTPLIEAERKILVGKCQRNKTKRQINLGRDGLTHNMLNDIHNHWTYAEAVRIKC 211

Query: 207 LGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYP 266
           LGVPTVDMKNVCTQLEDKTFGKII RHGG L+LYRGRNYN KKRP IPLMLW+PHEP+YP
Sbjct: 212 LGVPTVDMKNVCTQLEDKTFGKIIQRHGGTLILYRGRNYNRKKRPVIPLMLWKPHEPVYP 271

Query: 267 RLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCKG 326
           RLIKTTIDGLSI+ETKEMRK+GLAVP LTKLAKNGYYGSLVPMVRDAFL  ELVRIDC G
Sbjct: 272 RLIKTTIDGLSIEETKEMRKRGLAVPVLTKLAKNGYYGSLVPMVRDAFLVSELVRIDCTG 331

Query: 327 LERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKDYQPLDTG-YLTVRETFDDVDGN 381
           LERSDYKKIGCKLRDLVPCILVTFDKEQ+VVWRG+DY+P D G + + RE FD+  G+
Sbjct: 332 LERSDYKKIGCKLRDLVPCILVTFDKEQVVVWRGRDYKPPDDGHFFSNREFFDEPSGD 387

[Close]
BLAST of CSPI03G09260 vs. TrEMBL
Match: A0A067H4T0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014482mg PE=4 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 1.9e-160
Identity = 288/374 (77.01%), Postives = 319/374 (85.29%), Query Frame = 1 

Query: 27  SKLRELYAFEAPPSVSPSPE-PKPRSN------KPPKPRYKPPSSLDLGGKKPRRSNLPF 86
           SKL + Y+F+ PPS+SP PE P P  N      K  KP+Y+PPSSLD   KK   ++LPF
Sbjct: 37  SKLYDHYSFKPPPSLSPKPENPNPTLNPNKNFKKKSKPQYRPPSSLDAPKKK--YTDLPF 96

Query: 87  DFQYSYTETSPSVRPIGLREPKYSPFGPGRLDREWTGVCAPAANPKATSVE-GMEDPRLE 146
           DF+YSYTET+ +VRPIGLREPKYSPFGPGRL+REWTGVCAPAA+PK  S E G EDP LE
Sbjct: 97  DFRYSYTETNQNVRPIGLREPKYSPFGPGRLEREWTGVCAPAADPKVKSAEEGAEDPNLE 156

Query: 147 GKRRVMREAIQGEPLTGAERKALVEKCQKNKTKRQINLGRDGLTHNMLNDIHNHWRHGEA 206
            KR ++RE IQGEPLT AERKALVEKC +N+TKRQINLGRDGLTHNMLNDIHNHW+H EA
Sbjct: 157 EKRILVRERIQGEPLTNAERKALVEKCHRNRTKRQINLGRDGLTHNMLNDIHNHWKHAEA 216

Query: 207 VRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPH 266
           VRIKCLGVPTVDMKNVC QLEDKTFGKII RHGG LVLYRGRNYNPKKRP IPLMLWRPH
Sbjct: 217 VRIKCLGVPTVDMKNVCFQLEDKTFGKIIFRHGGTLVLYRGRNYNPKKRPVIPLMLWRPH 276

Query: 267 EPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLSCELVR 326
           EP+YP+LIKTTI+GLSI+ETKEMRK+GLAVP LTKLAKNGYYGSLVPMVRDAFL  ELVR
Sbjct: 277 EPVYPKLIKTTIEGLSIEETKEMRKRGLAVPVLTKLAKNGYYGSLVPMVRDAFLVSELVR 336

Query: 327 IDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKDYQ-PLDTG-YLTVRETFDD 386
           IDC+GLERSDYKKIGCKLRDLVPCILVTF+KEQIVVWRGKDY+ P D G + T RE FDD
Sbjct: 337 IDCQGLERSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYKHPGDDGQFFTHRELFDD 396

Query: 387 VDGNTGCVDDEVVM 391
            + ++ C  +E VM
Sbjct: 397 PENDSACGVEEEVM 408

[Close]
BLAST of CSPI03G09260 vs. TAIR10
Match: AT4G31010.1 (AT4G31010.1 RNA-binding CRS1 / YhbY (CRM) domain-containing protein)

HSP 1 Score: 535.4 bits (1378), Expect = 2.9e-152
Identity = 265/367 (72.21%), Postives = 302/367 (82.29%), Query Frame = 1 

Query: 27  SKLRELYAFEAPPSVSPSPEPKPRSN------KPPKPRYKPPSSLDLGGKKPRRSNLPFD 86
           S+LR+LY F++PP +S S    P  N      K PKP+Y+PPSSL+  G K   S+LPFD
Sbjct: 29  SRLRDLYNFQSPPPLSSSASENPDFNQKNNNKKKPKPQYRPPSSLE--GVKTVHSDLPFD 88

Query: 87  FQYSYTETSPSVRPIGLREPKYSPFGPGRLDREWTGVCAPAANPKATSVEGMEDPRLEGK 146
           F++SYTE+  +VRPIGLREPKYSPFGP RLDREWTGVCAPA NPK  SV+G+EDP+LE K
Sbjct: 89  FRFSYTESCSNVRPIGLREPKYSPFGPDRLDREWTGVCAPAVNPKVESVDGVEDPKLEEK 148

Query: 147 RRVMREAIQGEPLTGAERKALVEKCQKNKTKRQINLGRDGLTHNMLNDIHNHWRHGEAVR 206
           RR +RE IQG  LT AERK LVE CQ+NKTKRQ+NLGRDGLTHNMLND++NHW+H EAVR
Sbjct: 149 RRKVREKIQGASLTEAERKFLVELCQRNKTKRQVNLGRDGLTHNMLNDVYNHWKHAEAVR 208

Query: 207 IKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEP 266
           +KCLGVPT+DMKNV   LEDKTFG+++ +H G LVLYRGRNY+PKKRP IPLMLW+PHEP
Sbjct: 209 VKCLGVPTLDMKNVIFHLEDKTFGQVVSKHSGTLVLYRGRNYDPKKRPKIPLMLWKPHEP 268

Query: 267 IYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLSCELVRID 326
           +YPRLIKTTIDGLSIDETK MRKKGLAVPALTKLAKNGYYGSLVPMVRDAFL  ELVRID
Sbjct: 269 VYPRLIKTTIDGLSIDETKAMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLVSELVRID 328

Query: 327 CKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKDYQP--LDTGYLTV--RETFDD 384
           C GLER DYKKIG KLRDLVPCILVTFDKEQ+V+WRGKDY+P   D  Y +   RE+  D
Sbjct: 329 CLGLERKDYKKIGAKLRDLVPCILVTFDKEQVVIWRGKDYKPPKEDDEYSSFIHRESSID 388

[Close]
BLAST of CSPI03G09260 vs. TAIR10
Match: AT5G54890.1 (AT5G54890.1 RNA-binding CRS1 / YhbY (CRM) domain-containing protein)

HSP 1 Score: 334.0 bits (855), Expect = 1.3e-91
Identity = 168/326 (51.53%), Postives = 224/326 (68.71%), Query Frame = 1 

Query: 35  FEAPPSVSPSPEPKPRSNKPPKPRYKPPSSLDLGGKK-PRRSNLPFDFQYSYTETSPSVR 94
           ++ P S    P   P+  K  K + +  SS  +   K P  S+LPFDF+YSY+ET+P + 
Sbjct: 34  YDPPFSPLSKPTKPPKEKKKQKTKKQDQSSELVNDLKIPVISDLPFDFRYSYSETNPEIE 93

Query: 95  PIGLREPK-YSPFGPGRLDREWTGVCAPAANPKATSVEGMEDPRLEGKRRVMREAIQGEP 154
           PIG REPK +SPFGPGRLDR+WTG  A  A+P+    + +E+          R  + GE 
Sbjct: 94  PIGFREPKRFSPFGPGRLDRKWTGTTA-LASPEIDQSQWVEE----------RARVLGET 153

Query: 155 LTGAERKALVEKCQKNKTKRQINLGRDGLTHNMLNDIHNHWRHGEAVRIKCLGVPTVDMK 214
           LT  E   L+E+ + +   RQINLG+ G+THNM++DIHNHW+  EAVRIKCLGVPT+DM 
Sbjct: 154 LTEDEVTELIERYRHSDCTRQINLGKGGVTHNMIDDIHNHWKKAEAVRIKCLGVPTLDMD 213

Query: 215 NVCTQLEDKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDG 274
           N+C  LE+K+ GKI++R+   LVLYRGRNY+PK RP IPLMLW+PH PIYPRL+K   DG
Sbjct: 214 NICFHLEEKSGGKIVYRNINILVLYRGRNYDPKSRPIIPLMLWKPHPPIYPRLVKNVADG 273

Query: 275 LSIDETKEMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCKGLERSDYKKI 334
           L  +ETKEMR +GL  PAL KL +NG Y ++V  VR+ F + E+VR+DC  +  SD K+I
Sbjct: 274 LEFEETKEMRNRGLHSPALMKLTRNGVYVNVVGRVREEFETEEIVRLDCTHVGMSDCKRI 333

Query: 335 GCKLRDLVPCILVTFDKEQIVVWRGK 359
           G KL+++VPC+ + F  EQI++WRGK
Sbjct: 334 GVKLKEMVPCVPILFKDEQIILWRGK 348

[Close]
BLAST of CSPI03G09260 vs. TAIR10
Match: AT2G20020.1 (AT2G20020.1 RNA-binding CRS1 / YhbY (CRM) domain-containing protein)

HSP 1 Score: 308.5 bits (789), Expect = 5.8e-84
Identity = 170/374 (45.45%), Postives = 230/374 (61.50%), Query Frame = 1 

Query: 35  FEAPPSVSPSPEPKPR-SNKPPKPRYKPPSSLDLGGKKPRRSNLPFDFQYSYTETSPSVR 94
           +  P S    P+ KPR  + PP+   KP   L   G     +  PF+F+YSYTET P V+
Sbjct: 106 YSKPDSGPNRPKNKPRVPDSPPQLDAKPEVKLSEDGLTYVINGAPFEFKYSYTET-PKVK 165

Query: 95  PIGLREPKYSPFGPGRLDREWTGVCAPAANPKATSVE------------GMEDPRLEGKR 154
           P+ LREP Y+PFGP  + R WTG  AP    + T  E            G++  +  G  
Sbjct: 166 PLKLREPAYAPFGPTTMGRPWTGR-APLPQSQKTPREFDSFRLPPVGKKGLKPVQKPGPF 225

Query: 155 R--------VMREAIQGEPLTGAERKALVEKCQKNKTKRQINLGRDGLTHNMLNDIHNHW 214
           R          +E I GEPLT  E + LV  C K  T RQ+N+GRDGLTHNMLN+IH+ W
Sbjct: 226 RPGVGPRYVYSKEEILGEPLTKEEVRELVTSCLK--TTRQLNMGRDGLTHNMLNNIHDLW 285

Query: 215 RHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLM 274
           +     +IKC GV TVDM NVC QLE+K  GK+I+R GG L L+RGRNYN + RP  PLM
Sbjct: 286 KRRRVCKIKCKGVCTVDMDNVCEQLEEKIGGKVIYRRGGVLFLFRGRNYNHRTRPRFPLM 345

Query: 275 LWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLS 334
           LW+P  P+YPRLI+   +GL+  E   MR+KG  +  + KL KNG Y  LV  V++AF  
Sbjct: 346 LWKPVAPVYPRLIQQVPEGLTRQEATNMRRKGRELMPICKLGKNGVYCDLVKNVKEAFEV 405

Query: 335 CELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKDYQPLDTGYLTVRET 388
           CELVRIDC+G++ SD++KIG KL+DLVPC+LV+F+ EQI++WRG++++   T      + 
Sbjct: 406 CELVRIDCQGMKGSDFRKIGAKLKDLVPCVLVSFENEQILIWRGREWKSSLTTPDKKGDI 465

[Close]
BLAST of CSPI03G09260 vs. TAIR10
Match: AT1G23400.1 (AT1G23400.1 RNA-binding CRS1 / YhbY (CRM) domain-containing protein)

HSP 1 Score: 292.0 bits (746), Expect = 5.6e-79
Identity = 144/303 (47.52%), Postives = 197/303 (65.02%), Query Frame = 1 

Query: 78  PFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDREWTGVCA-----------PAANPKA 137
           PF+FQ+SY+ET P V+P+G+REP + PF P  + R WTG               + NP  
Sbjct: 110 PFEFQFSYSET-PKVKPVGIREPAFMPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPP 169

Query: 138 TSVEGMEDPRLEG--------KRRVMREAIQGEPLTGAERKALVEKCQKNKTKRQINLGR 197
               G++   + G        K  + RE + GEPL   E+  L++    +   RQ+NLGR
Sbjct: 170 AGKSGVKYVEMPGPLPFGRYPKEGMNREEVLGEPLKRWEKGMLIKPHMHDN--RQVNLGR 229

Query: 198 DGLTHNMLNDIHNHWRHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYR 257
           DG THNML  IH+HW+     +++C GVPTVDM NVC  LE+KT G+IIHR GG + L+R
Sbjct: 230 DGFTHNMLELIHSHWKRRRVCKVRCKGVPTVDMNNVCRVLEEKTGGEIIHRVGGVVYLFR 289

Query: 258 GRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNG 317
           GRNYN + RP  PLMLW+P  P+YP+LI+   +GL+ +E  E R KG ++  + KL+KNG
Sbjct: 290 GRNYNYRTRPQYPLMLWKPAAPVYPKLIQEVPEGLTKEEAHEFRVKGKSLRPICKLSKNG 349

Query: 318 YYGSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGK 362
            Y SLV  VRDAF    LV++DC GLE SDYKKIG KL++LVPC+L++FD EQI++WRG+
Sbjct: 350 VYVSLVKDVRDAFELSSLVKVDCPGLEPSDYKKIGAKLKELVPCVLLSFDDEQILMWRGR 409

[Close]
BLAST of CSPI03G09260 vs. TAIR10
Match: AT3G01370.1 (AT3G01370.1 CRM family member 2)

HSP 1 Score: 63.2 bits (152), Expect = 4.2e-10
Identity = 28/71 (39.44%), Postives = 43/71 (60.56%), Query Frame = 1 

Query: 172 RQINLGRDGLTHNMLNDIHNHWRHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHG 231
           +++ +G+ G+T  ++N IH  WR  E V+I C  +  ++MK     LE KT G +I R G
Sbjct: 183 KKLKIGKAGITEGIVNGIHERWRTTEVVKIFCEDISRMNMKRTHDVLETKTGGLVIWRSG 242

Query: 232 GFLVLYRGRNY 243
             ++LYRG NY
Sbjct: 243 SKILLYRGVNY 253

[Close]
BLAST of CSPI03G09260 vs. NCBI nr
Match: gi|449432211|ref|XP_004133893.1| (PREDICTED: CRS2-associated factor 1, mitochondrial [Cucumis sativus])

HSP 1 Score: 813.5 bits (2100), Expect = 1.6e-232
Identity = 391/392 (99.74%), Postives = 391/392 (99.74%), Query Frame = 1 

Query: 1   MFVIRTLFRQKSISHPYTSFNPCFFYSKLRELYAFEAPPSVSPSPEPKPRSNKPPKPRYK 60
           MFVIRTLFRQKSISHPYTSFNPCFFYSKLRELYAFEAPPSVSPSPEPKPRSNKPPKPRYK
Sbjct: 1   MFVIRTLFRQKSISHPYTSFNPCFFYSKLRELYAFEAPPSVSPSPEPKPRSNKPPKPRYK 60

Query: 61  PPSSLDLGGKKPRRSNLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDREWTGVCAP 120
           PPSSLDLGGKKPRRSNLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDREWTGVCAP
Sbjct: 61  PPSSLDLGGKKPRRSNLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDREWTGVCAP 120

Query: 121 AANPKATSVEGMEDPRLEGKRRVMREAIQGEPLTGAERKALVEKCQKNKTKRQINLGRDG 180
           AANPKATSVEGMEDPRLEGKRRVMREAIQGEPL GAERKALVEKCQKNKTKRQINLGRDG
Sbjct: 121 AANPKATSVEGMEDPRLEGKRRVMREAIQGEPLPGAERKALVEKCQKNKTKRQINLGRDG 180

Query: 181 LTHNMLNDIHNHWRHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGR 240
           LTHNMLNDIHNHWRHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGR
Sbjct: 181 LTHNMLNDIHNHWRHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGR 240

Query: 241 NYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYY 300
           NYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYY
Sbjct: 241 NYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYY 300

Query: 301 GSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKDY 360
           GSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKDY
Sbjct: 301 GSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKDY 360

Query: 361 QPLDTGYLTVRETFDDVDGNTGCVDDEVVMET 393
           QPLDTGYLTVRETFDDVDGNTGCVDDEVVMET
Sbjct: 361 QPLDTGYLTVRETFDDVDGNTGCVDDEVVMET 392

[Close]
BLAST of CSPI03G09260 vs. NCBI nr
Match: gi|659075384|ref|XP_008438115.1| (PREDICTED: CRS2-associated factor 1, mitochondrial [Cucumis melo])

HSP 1 Score: 767.3 bits (1980), Expect = 1.3e-218
Identity = 370/392 (94.39%), Postives = 379/392 (96.68%), Query Frame = 1 

Query: 1   MFVIRTLFRQKSISHPYTSFNPCFFYSKLRELYAFEAPPSVSPSP-EPKPRSNKPPKPRY 60
           MFVIRT+ R+KSI  P+TSFNPC FYSKLRELYAFE P SVSPSP EPKPRSNKPPKPRY
Sbjct: 1   MFVIRTISREKSIPRPHTSFNPCSFYSKLRELYAFEFPSSVSPSPPEPKPRSNKPPKPRY 60

Query: 61  KPPSSLDLGGKKPRRSNLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDREWTGVCA 120
           KPPSSLDLG KKPRRSNLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDR+WTGVCA
Sbjct: 61  KPPSSLDLGDKKPRRSNLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDRKWTGVCA 120

Query: 121 PAANPKATSVEGMEDPRLEGKRRVMREAIQGEPLTGAERKALVEKCQKNKTKRQINLGRD 180
           PA +PKATSVEGMEDPRLE KRRVMRE +QGEPLTGAERKALVEKCQKNKTKRQINLGRD
Sbjct: 121 PAVDPKATSVEGMEDPRLEEKRRVMRENLQGEPLTGAERKALVEKCQKNKTKRQINLGRD 180

Query: 181 GLTHNMLNDIHNHWRHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRG 240
           GLTHNMLNDIHNHW+HGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGG LVLYRG
Sbjct: 181 GLTHNMLNDIHNHWKHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGLLVLYRG 240

Query: 241 RNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGY 300
           RNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGY
Sbjct: 241 RNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGY 300

Query: 301 YGSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKD 360
           YGSL+PMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKD
Sbjct: 301 YGSLIPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKD 360

Query: 361 YQPLDTGYLTVRETFDDVDGNTGCVDDEVVME 392
           YQPLD GYLTVRETFDDVDGNTGCVDD+VVME
Sbjct: 361 YQPLDIGYLTVRETFDDVDGNTGCVDDKVVME 392

[Close]
BLAST of CSPI03G09260 vs. NCBI nr
Match: gi|802698099|ref|XP_012083508.1| (PREDICTED: CRS2-associated factor 1, mitochondrial [Jatropha curcas])

HSP 1 Score: 582.8 bits (1501), Expect = 4.5e-163
Identity = 282/358 (78.77%), Postives = 312/358 (87.15%), Query Frame = 1 

Query: 27  SKLRELYAFEAPPSVSPSP--EPKPRSNKPPKPRYKPPSSLDLGGKKPRRSNLPFDFQYS 86
           SKL + YAF  PPS+SP     P P + K  KP Y+PPS+LD  GKKP  S+LPFDF+YS
Sbjct: 34  SKLHDHYAFRPPPSLSPQEPDNPNPTTRKKQKPLYRPPSTLDRTGKKPTHSDLPFDFRYS 93

Query: 87  YTETSPSVRPIGLREPKYSPFGPGRLDREWTGVCAPAANPKATSVEGMEDPRLEGKRRVM 146
           YTE+S SVRPIGLREPKYSPFGP RLDR WTGVCAPA +PK  S++G +DP LE KR++M
Sbjct: 94  YTESSQSVRPIGLREPKYSPFGPDRLDRSWTGVCAPAVDPKVKSLDGTDDPNLEEKRKLM 153

Query: 147 REAIQGEPLTGAERKALVEKCQKNKTKRQINLGRDGLTHNMLNDIHNHWRHGEAVRIKCL 206
           RE IQG+PLT AERK LV +CQ+NKTKRQINLGRDGLTHNMLNDIHNHW+H EAVRIKCL
Sbjct: 154 REKIQGDPLTNAERKILVAQCQRNKTKRQINLGRDGLTHNMLNDIHNHWKHAEAVRIKCL 213

Query: 207 GVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPR 266
           GVPTVDMKNVC+QLEDKTFGKIIHRH G LVLYRGRNYNPKKRP IPLM+WRPHEPIYPR
Sbjct: 214 GVPTVDMKNVCSQLEDKTFGKIIHRHCGSLVLYRGRNYNPKKRPVIPLMMWRPHEPIYPR 273

Query: 267 LIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCKGL 326
           LIKTTIDGLSIDETKEMRK+GLAVPALTKLAKNGYY SLVPMVRDAFL+ ELVRIDC+GL
Sbjct: 274 LIKTTIDGLSIDETKEMRKRGLAVPALTKLAKNGYYASLVPMVRDAFLTNELVRIDCQGL 333

Query: 327 ERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKDYQPLDTGYLTV-RETFDDVDGNT 382
           E+SDYKKIGCKLRDLVPCILVTF+KEQIVVWRGKDY+P + G L   RE FDD +G++
Sbjct: 334 EKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYKPPEDGELFADREFFDDPEGSS 391

[Close]
BLAST of CSPI03G09260 vs. NCBI nr
Match: gi|645254005|ref|XP_008232837.1| (PREDICTED: CRS2-associated factor 1, mitochondrial isoform X1 [Prunus mume])

HSP 1 Score: 580.5 bits (1495), Expect = 2.2e-162
Identity = 285/368 (77.45%), Postives = 318/368 (86.41%), Query Frame = 1 

Query: 27  SKLRELYAFEAPPSVSPSPEPK-PRSNKPPK---PRYKPPSSLDLGGKKPRRSNLPFDFQ 86
           SKL + Y+F+ PPS+SP+ + + P  N P K   P+Y+PPSSLD  G+KP  S+LPFDF+
Sbjct: 26  SKLHDRYSFKPPPSLSPNTQGQNPNHNNPKKKQKPQYRPPSSLDRTGQKPIHSDLPFDFR 85

Query: 87  YSYTETSPSVRPIGLREPKYSPFGPGRLDREWTGVCAPAANPKATSVEGME-DPRLEGKR 146
           YSYTE+SP+VRPIGLREPKYSPFGPGR+DREW GVCAPA +PK  SV+G E DP+LE KR
Sbjct: 86  YSYTESSPTVRPIGLREPKYSPFGPGRIDREWIGVCAPAVDPKVRSVQGAEEDPKLEEKR 145

Query: 147 RVMREAIQGEPLTGAERKALVEKCQKNKTKRQINLGRDGLTHNMLNDIHNHWRHGEAVRI 206
           +  R+ +QGEPLT AERK LV+KCQ+ KTKRQINLGRDGLTHNMLNDI NHW+H EAVRI
Sbjct: 146 KRRRQKVQGEPLTPAERKILVDKCQRPKTKRQINLGRDGLTHNMLNDIQNHWKHDEAVRI 205

Query: 207 KCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPI 266
           KCLGVPTVDMKNVCTQLEDKTFGKIIHRHGG LVLYRGRNY PKKRP IPLMLWRPHEPI
Sbjct: 206 KCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGVLVLYRGRNYKPKKRPVIPLMLWRPHEPI 265

Query: 267 YPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLSCELVRIDC 326
           YPRLIKTTIDGLSI+ETKEMRK+GLAVPALTKLAKNGYYGSLV MVRDAF+ CELVRIDC
Sbjct: 266 YPRLIKTTIDGLSIEETKEMRKRGLAVPALTKLAKNGYYGSLVSMVRDAFICCELVRIDC 325

Query: 327 KGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVWRGKDYQPLDTGY-LTVRETFDD---- 384
           +GLE+SDYKKIGCKLRDLVPCILVTF+KEQIVVWRGKDY+PL+ GY L  RE FD+    
Sbjct: 326 QGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYKPLEDGYFLPDRELFDNPEGD 385

[Close]
BLAST of CSPI03G09260 vs. NCBI nr
Match: gi|225453847|ref|XP_002272563.1| (PREDICTED: CRS2-associated factor 1, mitochondrial [Vitis vinifera])

HSP 1 Score: 577.8 bits (1488), Expect = 1.5e-161
Identity = 284/392 (72.45%), Postives = 323/392 (82.40%), Query Frame = 1 

Query: 1   MFVIRTLFRQKSISHP---------YTSFNPCFFYSKLRELYAFEAP--PSVSPSPEPKP 60
           MF++    RQ   SH           +S  P    S+L + Y+F++P  P  +P+P P+P
Sbjct: 1   MFIVTRFSRQIRQSHSAAVTLSTRRLSSSAPPSPSSRLLDHYSFKSPVSPFQNPNPNPEP 60

Query: 61  RSNKPPKPRYKPPSSLDLGGKKPRRSNLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGR 120
            + K  KP Y+PPSSLD  GKKP RS+LPFDF+YSYTE+SP+VRPIGLREPKYSPFGPG 
Sbjct: 61  STKKKQKPPYRPPSSLDRTGKKPLRSDLPFDFRYSYTESSPAVRPIGLREPKYSPFGPGL 120

Query: 121 LDREWTGVCAPAANPKATSVEGMEDPRLEGKRRVMREAIQGEPLTGAERKALVEKCQKNK 180
           LDREWTGVCAPA +PK  SV+G EDP+LE KRR MRE   GEPLT AERK LVEKCQ+++
Sbjct: 121 LDREWTGVCAPAVDPKVRSVDGKEDPKLEEKRRRMREKTLGEPLTAAERKILVEKCQRHR 180

Query: 181 TKRQINLGRDGLTHNMLNDIHNHWRHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHR 240
           TKRQINLGRDGLTHNMLNDIHNHW+H EAVRIKC+GVPTVDMKNVCTQLEDKT GK+IHR
Sbjct: 181 TKRQINLGRDGLTHNMLNDIHNHWKHAEAVRIKCMGVPTVDMKNVCTQLEDKTSGKVIHR 240

Query: 241 HGGFLVLYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVP 300
            GG LVLYRGRNY+PKKRP IPLMLWRPHEPIYPRLIKT IDGLSI+ETKEMRK+GLAVP
Sbjct: 241 QGGLLVLYRGRNYHPKKRPVIPLMLWRPHEPIYPRLIKTVIDGLSIEETKEMRKRGLAVP 300

Query: 301 ALTKLAKNGYYGSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDK 360
           ALTKLAKNGYYGSLVPMVRDAFL+ EL+RIDC+GLER DYKKIGCKLRD VPCILVTF+K
Sbjct: 301 ALTKLAKNGYYGSLVPMVRDAFLTDELIRIDCQGLERRDYKKIGCKLRDFVPCILVTFEK 360

Query: 361 EQIVVWRGKDYQPLDTGYLTV-RETFDDVDGN 381
           EQIVVWRGKDY+P + G   + RE+ D+ D +
Sbjct: 361 EQIVVWRGKDYKPTEAGQFPIERESLDNWDSD 392

The following BLAST results are available for this feature:
BLAST of CSPI03G09260 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CAF1M_ARATH5.2e-15172.21CRS2-associated factor 1, mitochondrial OS=Arabidopsis thaliana GN=At4g31010 PE=... [more]
CAF1M_ORYSJ3.6e-13669.68CRS2-associated factor 1, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g... [more]
CAF2M_ORYSJ4.6e-9151.48CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g... [more]
CAF2M_ARATH2.3e-9051.53CRS2-associated factor 2, mitochondrial OS=Arabidopsis thaliana GN=At5g54890 PE=... [more]
CAF1P_ARATH1.0e-8245.45CRS2-associated factor 1, chloroplastic OS=Arabidopsis thaliana GN=At2g20020 PE=... [more]
BLAST of CSPI03G09260 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L906_CUCSA1.1e-23299.74Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124850 PE=4 SV=1[more]
E6NU21_JATCU3.1e-16378.77JHL05D22.2 protein OS=Jatropha curcas GN=JHL05D22.2 PE=4 SV=1[more]
D7U7P9_VITVI1.0e-16172.45Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g01220 PE=4 SV=... [more]
A0A061DVQ3_THECC1.5e-16077.93RNA-binding CRS1 / YhbY (CRM) domain-containing protein isoform 1 OS=Theobroma c... [more]
A0A067H4T0_CITSI1.9e-16077.01Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014482mg PE=4 SV=1[more]
BLAST of CSPI03G09260 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G31010.12.9e-15272.21 RNA-binding CRS1 / YhbY (CRM) domain-containing protein[more]
AT5G54890.11.3e-9151.53 RNA-binding CRS1 / YhbY (CRM) domain-containing protein[more]
AT2G20020.15.8e-8445.45 RNA-binding CRS1 / YhbY (CRM) domain-containing protein[more]
AT1G23400.15.6e-7947.52 RNA-binding CRS1 / YhbY (CRM) domain-containing protein[more]
AT3G01370.14.2e-1039.44 CRM family member 2[more]
BLAST of CSPI03G09260 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449432211|ref|XP_004133893.1|1.6e-23299.74PREDICTED: CRS2-associated factor 1, mitochondrial [Cucumis sativus][more]
gi|659075384|ref|XP_008438115.1|1.3e-21894.39PREDICTED: CRS2-associated factor 1, mitochondrial [Cucumis melo][more]
gi|802698099|ref|XP_012083508.1|4.5e-16378.77PREDICTED: CRS2-associated factor 1, mitochondrial [Jatropha curcas][more]
gi|645254005|ref|XP_008232837.1|2.2e-16277.45PREDICTED: CRS2-associated factor 1, mitochondrial isoform X1 [Prunus mume][more]
gi|225453847|ref|XP_002272563.1|1.5e-16172.45PREDICTED: CRS2-associated factor 1, mitochondrial [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001890RNA-binding_CRM
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0000373 Group II intron splicing
biological_process GO:0097031 mitochondrial respiratory chain complex I biogenesis
biological_process GO:0097034 mitochondrial respiratory chain complex IV biogenesis
biological_process GO:0000956 nuclear-transcribed mRNA catabolic process
biological_process GO:0048573 photoperiodism, flowering
biological_process GO:0010048 vernalization response
biological_process GO:0008150 biological_process
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005575 cellular_component
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G09260.1CSPI03G09260.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001890RNA-binding, CRM domainGENE3DG3DSA:3.30.110.60coord: 273..362
score: 4.8E-19coord: 152..247
score: 2.5
IPR001890RNA-binding, CRM domainPFAMPF01985CRS1_YhbYcoord: 275..356
score: 1.0E-10coord: 153..238
score: 7.8
IPR001890RNA-binding, CRM domainSMARTSM01103CRS1_YhbY_2coord: 273..356
score: 2.3E-11coord: 153..238
score: 1.5
IPR001890RNA-binding, CRM domainPROFILEPS51295CRMcoord: 151..249
score: 19.855coord: 271..367
score: 16
IPR001890RNA-binding, CRM domainunknownSSF75471YhbY-likecoord: 152..248
score: 1.7E-24coord: 273..362
score: 3.53
NoneNo IPR availablePANTHERPTHR31846FAMILY NOT NAMEDcoord: 27..378
score: 1.1E
NoneNo IPR availablePANTHERPTHR31846:SF9CRS2-ASSOCIATED FACTOR 1, MITOCHONDRIALcoord: 27..378
score: 1.1E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI03G09260Cla021279Watermelon (97103) v1cpiwmB231
CSPI03G09260Csa3G124850Cucumber (Chinese Long) v2cpicuB120
CSPI03G09260MELO3C006157Melon (DHL92) v3.5.1cpimeB230
CSPI03G09260ClCG05G001970Watermelon (Charleston Gray)cpiwcgB226
CSPI03G09260Lsi05G019930Bottle gourd (USVL1VR-Ls)cpilsiB207
CSPI03G09260MELO3C006157.2Melon (DHL92) v3.6.1cpimedB224
CSPI03G09260CsaV3_3G009380Cucumber (Chinese Long) v3cpicucB144
CSPI03G09260Cla97C05G082410Watermelon (97103) v2cpiwmbB209
CSPI03G09260Bhi01G000220Wax gourdcpiwgoB287
CSPI03G09260Cucsa.257930Cucumber (Gy14) v1cgycpiB383
CSPI03G09260CmaCh14G020010Cucurbita maxima (Rimu)cmacpiB255
CSPI03G09260CmoCh14G020620Cucurbita moschata (Rifu)cmocpiB243
CSPI03G09260Cp4.1LG03g16890Cucurbita pepo (Zucchini)cpecpiB611
CSPI03G09260CsGy3G009340Cucumber (Gy14) v2cgybcpiB110
CSPI03G09260Carg14813Silver-seed gourdcarcpiB0651
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI03G09260Wild cucumber (PI 183967)cpicpiB105
CSPI03G09260Wild cucumber (PI 183967)cpicpiB111
CSPI03G09260Wild cucumber (PI 183967)cpicpiB126
CSPI03G09260Cucumber (Gy14) v1cgycpiB455
CSPI03G09260Cucumber (Gy14) v1cgycpiB537
CSPI03G09260Cucurbita maxima (Rimu)cmacpiB292
CSPI03G09260Cucurbita maxima (Rimu)cmacpiB826
CSPI03G09260Cucurbita maxima (Rimu)cmacpiB906
CSPI03G09260Cucurbita moschata (Rifu)cmocpiB283
CSPI03G09260Cucurbita moschata (Rifu)cmocpiB814
CSPI03G09260Cucurbita moschata (Rifu)cmocpiB886
CSPI03G09260Cucumber (Chinese Long) v2cpicuB150
CSPI03G09260Melon (DHL92) v3.5.1cpimeB167
CSPI03G09260Melon (DHL92) v3.5.1cpimeB177
CSPI03G09260Melon (DHL92) v3.5.1cpimeB249
CSPI03G09260Watermelon (Charleston Gray)cpiwcgB250
CSPI03G09260Watermelon (97103) v1cpiwmB251
CSPI03G09260Watermelon (97103) v1cpiwmB259
CSPI03G09260Watermelon (97103) v1cpiwmB278
CSPI03G09260Cucurbita pepo (Zucchini)cpecpiB315
CSPI03G09260Cucurbita pepo (Zucchini)cpecpiB861
CSPI03G09260Bottle gourd (USVL1VR-Ls)cpilsiB153
CSPI03G09260Melon (DHL92) v3.6.1cpimedB158
CSPI03G09260Melon (DHL92) v3.6.1cpimedB168
CSPI03G09260Melon (DHL92) v3.6.1cpimedB246
CSPI03G09260Cucumber (Gy14) v2cgybcpiB209
CSPI03G09260Cucumber (Gy14) v2cgybcpiB264
CSPI03G09260Silver-seed gourdcarcpiB0525
CSPI03G09260Silver-seed gourdcarcpiB0974
CSPI03G09260Silver-seed gourdcarcpiB1116
CSPI03G09260Cucumber (Chinese Long) v3cpicucB164
CSPI03G09260Cucumber (Chinese Long) v3cpicucB178
CSPI03G09260Watermelon (97103) v2cpiwmbB178
CSPI03G09260Watermelon (97103) v2cpiwmbB234