Carg14813 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg14813
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	CRS2-associated factor 1, mitochondrial
Location	Cucurbita_argyrosperma_scaffold_079 : 93311 .. 96068 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAACCATTTCCGGTCGCGCGACATTGTTCATCCATGCGCAATCTACCTCATGTTCGTTATCAGACTCTTCCGCCAGAATCCAATTCCGTTTGCTCATCCTCATACACCTTCCAATCGATGTTTCTGCTACTCCAAACTCCGGGATCACTACGCTTTTGAATCTCCACCTTCTCTCTCCCCTAAACCCCCACCGCCGGAGCTCAAACCGCGGCAAAACAAACCACTGAAACCGCGGTACAAACCACCATCGTCGCTCGATCTCGCTGACAAGAAGCCAAAGCATTCAGACTTGCCATTTGATTTCCAGTACAGTTACACGGAGACTAGCCTCTCGGTGAGGCCTATCGGGCTTCGAGAACCGAAGTTTTCACCGTTTGGGCCTGGGCGGCTTGACCGGAAATGGACTGGGGTGTGTGCCCCGGCGGTGGAGCCGAAGGTGAGCTCTCTAGAGAGCACGGAAGATCCAAAACTGGAAGAGAAGAGGAGGGTCATGTGGGAGAATATTCAAGGGGAGCCACTGACAGGGGCCGAGAGAAAGGCTTTGGTGGAAACTTGTCAAAGGAAGAAAACAAAGAGGCAGATTAATTTGGGTATGTGATACCAAGTTCTATTAATCTATTGTTTGCACATATAAAATTGTTGATCTTGGACGCTGTTTTCTCATCATTTCTAATTGATAGATGCTTCATGGATATTGAGATTATCTTATTTTCCGTGCTTAAATTACTGAGGCATCTGATAATACGATCTCTATATTGAATGGCTCCGTTGGGATAATTGCATTTTCTTCTAACTACATAACTTCTATGCGTTCGTAGGAAGAGATGGTTTAACTCACAATATGTTAAATGATATCTATAATCACTGGAAACATGCTGAAGCAGTGAGGATCAAATGTTTAGGTGTTCCCACTGTTGATATGAAAAATGTGTGCACGCAGCTTGAGGTATGGCTTTCATTTCTTCGGGTGGAGTTTTCTTGTTATAGGCAAATGTTTTAGTTCTTCATTTCATAACCTATCGAGATTGTTCCACAAATTACATTCAACGTATTGAAAATGTATTTTGAGTCACACCCACCTGTTCGTGTACGTTTAATTCGAGGTTTGTCCACGCCTGCAGGATAAAACCTTTGGAAAGATCATTCATAGGCATGGTGGTTTTCTTGTTCTATACAGAGGGAGGAAATATAATCCCAAGAAAAGGCCATTCATTCCCTTAATGTTATGGAGACCCCATGAACCTGTATATCCCAGGCTGATTAAAACTACAATTGATGGACTGAGCATTAATGAAACAAAAGAAATGAGAAAGAAAGGACTAGCTGTTCCTGCTTTGACAAGACTTGGTATGTGTTTGAGAACTTTTTTTTAAAGCTTGTTTCGAGTAATATTACCGTCTCATCATAACGTCATTAACTAACGCATCATGCCTGTGGATTTTAGCAAAAAATGGTTACTATGGTAGTTTGGTACCCATGGTTCGTGATGCTTTTCTCTGCTGCGAGTTGGTTCGGATTGATTGTCAAGGCCTTGAGAAGAGTGATTACAAGAAAATTGGCTGCAAGCTTCGGGTAATGGTCGTTTCCCTCATGCCTTTATGTAACTATTCTTAAATTCATAAATTCTTAAATCATAGAAAGGAAGGAAGAAGGACCCTTACCAGGCCATGAGTGTTGTTCTTCATGTGTACCTAGATTTTTGTTTCGTGGCATCATGCATTGGCGTTAAAAATCGGTTCTACTTGACTAAGCCCCGTGCTCATCTCCTAAGGAGGGAGTTGTTTATTGTGCCAAAATTTGAATTCTTTTCATTTTTTATCAACTTTCCTTCTTAAATCAGGACCTTGTGCCTTGTATCTTGGTGACGTTTGAGAAGGAGCAGATTGTAGTGTGGAGAGGCAAGGATTACCGGCCTTCAGAATCTGAATGTTTTCTTACAGTCAGAGAGTCATTTGATGATGTTGATGGCAATACGAATTGTGTCGACAATGAAAATTTTGACGACGAATGCTCCGATGCGGGCTTTCAATCTGGTAATAGCGAGTAGTCCCTTGGTTACTAAACATCCTATGCGAATCATTGTACCAAAACATCATGATTTTGAGCTTGTGATTTTGTTTTCAAGGCTACATATTAATATTGCAGCTGCAAAGCAAATTCCGAAAGACTGATGATTCGAATGCACTATGCTGTAGATTGACCCATATTGTTTGTTCATATCATTTATTGCCTCATTCTTCTGTTCTCCCATGAGGGAGTCAAAATTCTGCAGGGCATTCTTTTTTCGGGTTCAACAATACCGTAGAGCGTAGAGGTTTGAACTCTTAACTTTCTTTTTGACAATGGTGTATACTTTAGCTAGCGGAACTATGTTCATGTTGAGTTGTTCTACGCCTATATTGGCTTATCAAATTTTTGTTATCGCAACCCACGAGTCTTAACTTCCCTCTAACGACTAATTTTCTTCCCTTTTTTGTTCCGGTTTGACAACGAAAACGTTGTGATGTTCTTCTCTTGTAGTCTGGTCCAGTCTCTAGACGATTATTGCCCTCATTTTTCAATGCCTCCAGTTGTTATTCTATCCGATGAAAGCTACACATGACTGATAGCTTTGAGATTGCTCGTGAACTTTAACATCTTTAACGATGTTCATCTTTATAACTACTGCATTTAATAATATACCTGTGTTTTGATATATATTTGATATATATTTGTTTCATATTAGATCGATCTTTTAATAATCTTTTCATATTAAAC

mRNA sequence

TAAACCATTTCCGGTCGCGCGACATTGTTCATCCATGCGCAATCTACCTCATGTTCGTTATCAGACTCTTCCGCCAGAATCCAATTCCGTTTGCTCATCCTCATACACCTTCCAATCGATGTTTCTGCTACTCCAAACTCCGGGATCACTACGCTTTTGAATCTCCACCTTCTCTCTCCCCTAAACCCCCACCGCCGGAGCTCAAACCGCGGCAAAACAAACCACTGAAACCGCGGTACAAACCACCATCGTCGCTCGATCTCGCTGACAAGAAGCCAAAGCATTCAGACTTGCCATTTGATTTCCAGTACAGTTACACGGAGACTAGCCTCTCGGTGAGGCCTATCGGGCTTCGAGAACCGAAGTTTTCACCGTTTGGGCCTGGGCGGCTTGACCGGAAATGGACTGGGGTGTGTGCCCCGGCGGTGGAGCCGAAGGTGAGCTCTCTAGAGAGCACGGAAGATCCAAAACTGGAAGAGAAGAGGAGGGTCATGTGGGAGAATATTCAAGGGGAGCCACTGACAGGGGCCGAGAGAAAGGCTTTGGTGGAAACTTGTCAAAGGAAGAAAACAAAGAGGCAGATTAATTTGGGAAGAGATGGTTTAACTCACAATATGTTAAATGATATCTATAATCACTGGAAACATGCTGAAGCAGTGAGGATCAAATGTTTAGGTGTTCCCACTGTTGATATGAAAAATGTGTGCACGCAGCTTGAGGATAAAACCTTTGGAAAGATCATTCATAGGCATGGTGGTTTTCTTGTTCTATACAGAGGGAGGAAATATAATCCCAAGAAAAGGCCATTCATTCCCTTAATGTTATGGAGACCCCATGAACCTGTATATCCCAGGCTGATTAAAACTACAATTGATGGACTGAGCATTAATGAAACAAAAGAAATGAGAAAGAAAGGACTAGCTGTTCCTGCTTTGACAAGACTTGCAAAAAATGGTTACTATGGTAGTTTGGTACCCATGGTTCGTGATGCTTTTCTCTGCTGCGAGTTGGTTCGGATTGATTGTCAAGGCCTTGAGAAGAGTGATTACAAGAAAATTGGCTGCAAGCTTCGGGACCTTGTGCCTTGTATCTTGGTGACGTTTGAGAAGGAGCAGATTGTAGTGTGGAGAGGCAAGGATTACCGGCCTTCAGAATCTGAATGTTTTCTTACAGTCAGAGAGTCATTTGATGATGTTGATGGCAATACGAATTGTGTCGACAATGAAAATTTTGACGACGAATGCTCCGATGCGGGCTTTCAATCTGGTAATAGCGAGTAGTCCCTTGGTTACTAAACATCCTATGCGAATCATTGTACCAAAACATCATGATTTTGAGCTTGTGATTTTGTTTTCAAGGCTACATATTAATATTGCAGCTGCAAAGCAAATTCCGAAAGACTGATGATTCGAATGCACTATGCTGTAGATTGACCCATATTGTTTGTTCATATCATTTATTGCCTCATTCTTCTGTTCTCCCATGAGGGAGTCAAAATTCTGCAGGGCATTCTTTTTTCGGGTTCAACAATACCGTAGAGCGTAGAGGTTTGAACTCTTAACTTTCTTTTTGACAATGGTGTATACTTTAGCTAGCGGAACTATGTTCATGTTGAGTTGTTCTACGCCTATATTGGCTTATCAAATTTTTGTTATCGCAACCCACGAGTCTTAACTTCCCTCTAACGACTAATTTTCTTCCCTTTTTTGTTCCGGTTTGACAACGAAAACGTTGTGATGTTCTTCTCTTGTAGTCTGGTCCAGTCTCTAGACGATTATTGCCCTCATTTTTCAATGCCTCCAGTTGTTATTCTATCCGATGAAAGCTACACATGACTGATAGCTTTGAGATTGCTCGTGAACTTTAACATCTTTAACGATGTTCATCTTTATAACTACTGCATTTAATAATATACCTGTGTTTTGATATATATTTGATATATATTTGTTTCATATTAGATCGATCTTTTAATAATCTTTTCATATTAAAC

Coding sequence (CDS)

ATGTTCGTTATCAGACTCTTCCGCCAGAATCCAATTCCGTTTGCTCATCCTCATACACCTTCCAATCGATGTTTCTGCTACTCCAAACTCCGGGATCACTACGCTTTTGAATCTCCACCTTCTCTCTCCCCTAAACCCCCACCGCCGGAGCTCAAACCGCGGCAAAACAAACCACTGAAACCGCGGTACAAACCACCATCGTCGCTCGATCTCGCTGACAAGAAGCCAAAGCATTCAGACTTGCCATTTGATTTCCAGTACAGTTACACGGAGACTAGCCTCTCGGTGAGGCCTATCGGGCTTCGAGAACCGAAGTTTTCACCGTTTGGGCCTGGGCGGCTTGACCGGAAATGGACTGGGGTGTGTGCCCCGGCGGTGGAGCCGAAGGTGAGCTCTCTAGAGAGCACGGAAGATCCAAAACTGGAAGAGAAGAGGAGGGTCATGTGGGAGAATATTCAAGGGGAGCCACTGACAGGGGCCGAGAGAAAGGCTTTGGTGGAAACTTGTCAAAGGAAGAAAACAAAGAGGCAGATTAATTTGGGAAGAGATGGTTTAACTCACAATATGTTAAATGATATCTATAATCACTGGAAACATGCTGAAGCAGTGAGGATCAAATGTTTAGGTGTTCCCACTGTTGATATGAAAAATGTGTGCACGCAGCTTGAGGATAAAACCTTTGGAAAGATCATTCATAGGCATGGTGGTTTTCTTGTTCTATACAGAGGGAGGAAATATAATCCCAAGAAAAGGCCATTCATTCCCTTAATGTTATGGAGACCCCATGAACCTGTATATCCCAGGCTGATTAAAACTACAATTGATGGACTGAGCATTAATGAAACAAAAGAAATGAGAAAGAAAGGACTAGCTGTTCCTGCTTTGACAAGACTTGCAAAAAATGGTTACTATGGTAGTTTGGTACCCATGGTTCGTGATGCTTTTCTCTGCTGCGAGTTGGTTCGGATTGATTGTCAAGGCCTTGAGAAGAGTGATTACAAGAAAATTGGCTGCAAGCTTCGGGACCTTGTGCCTTGTATCTTGGTGACGTTTGAGAAGGAGCAGATTGTAGTGTGGAGAGGCAAGGATTACCGGCCTTCAGAATCTGAATGTTTTCTTACAGTCAGAGAGTCATTTGATGATGTTGATGGCAATACGAATTGTGTCGACAATGAAAATTTTGACGACGAATGCTCCGATGCGGGCTTTCAATCTGGTAATAGCGAGTAG

Protein sequence

MFVIRLFRQNPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLKPRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTGVCAPAVEPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQRKKTKRQINLGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGRKYNPKKRPFIPLMLWRPHEPVYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAKNGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYRPSESECFLTVRESFDDVDGNTNCVDNENFDDECSDAGFQSGNSE

Homology

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BLAST of Carg14813 vs. NCBI nr
Match: XP_023526250.1 (CRS2-associated factor 1, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 835.1 bits (2156), Expect = 1.0e-238
Identity = 400/413 (96.85%), Postives = 406/413 (98.31%), Query Frame = 0


Query: 1   MFVIRLFRQNPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60
           MFVIRLFRQNPIPFAHP TPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK
Sbjct: 1   MFVIRLFRQNPIPFAHPPTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60

Query: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 120
           PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG
Sbjct: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 120

Query: 121 VCAPAVEPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQRKKTKRQINL 180
           VCAPAV+PKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERK LVETCQ+KKTKRQINL
Sbjct: 121 VCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQKKKTKRQINL 180

Query: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVL 240
           GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLE+KTFGKIIHRHGGFLVL
Sbjct: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240

Query: 241 YRGRKYNPKKRPFIPLMLWRPHEPVYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK 300
           YRGR YNPKKRPFIPLMLWRPHEP+YPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK
Sbjct: 241 YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK 300

Query: 301 NGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360
           NGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR
Sbjct: 301 NGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360

Query: 361 GKDYRPSESECFLTVRESFDDVDGNTNCV----DNENFDDECSDAGFQSGNSE 410
           GKDY+PSESECFLTVRESFDDVDGNTNCV    DNENFDDECSDAGFQSGN+E
Sbjct: 361 GKDYQPSESECFLTVRESFDDVDGNTNCVDNDDDNENFDDECSDAGFQSGNNE 413

[Close]

BLAST of Carg14813 vs. NCBI nr
Match: XP_022924354.1 (CRS2-associated factor 1, mitochondrial isoform X1 [Cucurbita moschata])

HSP 1 Score: 833.2 bits (2151), Expect = 3.9e-238
Identity = 399/413 (96.61%), Postives = 406/413 (98.31%), Query Frame = 0


Query: 1   MFVIRLFRQNPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60
           MFVIRLFRQNPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK
Sbjct: 1   MFVIRLFRQNPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60

Query: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 120
           PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG
Sbjct: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 120

Query: 121 VCAPAVEPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQRKKTKRQINL 180
           VCAPAV+PKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERK LVETCQ+KKTKRQINL
Sbjct: 121 VCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQKKKTKRQINL 180

Query: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVL 240
           GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLE+KTFGKIIHRHGGFLVL
Sbjct: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240

Query: 241 YRGRKYNPKKRPFIPLMLWRPHEPVYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK 300
           YRGR YNPKKRPFIPLMLWRPHEPVYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK
Sbjct: 241 YRGRNYNPKKRPFIPLMLWRPHEPVYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK 300

Query: 301 NGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360
           NGYYGSLVPMVRDAFL CELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR
Sbjct: 301 NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360

Query: 361 GKDYRPSESECFLTVRESFDDVDGNTNCV----DNENFDDECSDAGFQSGNSE 410
           GKDY+PSESECFLTVRESFDDVDGNTNCV    DN+NFDDECSD+GFQSGN+E
Sbjct: 361 GKDYQPSESECFLTVRESFDDVDGNTNCVDNDDDNQNFDDECSDSGFQSGNNE 413

[Close]

BLAST of Carg14813 vs. NCBI nr
Match: XP_022980305.1 (CRS2-associated factor 1, mitochondrial [Cucurbita maxima])

HSP 1 Score: 793.9 bits (2049), Expect = 2.6e-226
Identity = 380/411 (92.46%), Postives = 392/411 (95.38%), Query Frame = 0


Query: 1   MFVIRLFRQNPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60
           MFVIRLFRQ+PIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK
Sbjct: 1   MFVIRLFRQDPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60

Query: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 120
           PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETS  VRPIGLREPKFSPFGPGRLDRKWTG
Sbjct: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSRLVRPIGLREPKFSPFGPGRLDRKWTG 120

Query: 121 VCAPAVEPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQRKKTKRQINL 180
           VCAPAV+PK SSLES EDPKLEEKRRVMWENIQGEPLTGAERKALVETCQ+KKTKRQINL
Sbjct: 121 VCAPAVDPKASSLESMEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQKKKTKRQINL 180

Query: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVL 240
           GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLE+KTFGKIIHRHGGFLVL
Sbjct: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240

Query: 241 YRGRKYNPKKRPFIPLMLWRPHEPVYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK 300
           YRGR YNPKKRPFIPLMLWRPHEP+YPRLIKTTIDGLSI+ETKEMRKKGLAVPALTRL+K
Sbjct: 241 YRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTRLSK 300

Query: 301 NGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360
           NGYYGSLVPMVRDAFL CELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR
Sbjct: 301 NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360

Query: 361 GKDYRPSESECFLTVRESFDDVDGNTNCVDNE------NFDDECSDAGFQS 406
           GKDY+PSESECFL+VRESFDD DGNT CVD++         + C DAGFQS
Sbjct: 361 GKDYQPSESECFLSVRESFDDFDGNTKCVDSDXXXXXXXXXNNCCDAGFQS 411

[Close]

BLAST of Carg14813 vs. NCBI nr
Match: XP_022924355.1 (CRS2-associated factor 1, mitochondrial isoform X2 [Cucurbita moschata])

HSP 1 Score: 706.4 bits (1822), Expect = 5.5e-200
Identity = 336/348 (96.55%), Postives = 342/348 (98.28%), Query Frame = 0


Query: 1   MFVIRLFRQNPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60
           MFVIRLFRQNPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK
Sbjct: 1   MFVIRLFRQNPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60

Query: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 120
           PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG
Sbjct: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 120

Query: 121 VCAPAVEPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQRKKTKRQINL 180
           VCAPAV+PKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERK LVETCQ+KKTKRQINL
Sbjct: 121 VCAPAVDPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKTLVETCQKKKTKRQINL 180

Query: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVL 240
           GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLE+KTFGKIIHRHGGFLVL
Sbjct: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEEKTFGKIIHRHGGFLVL 240

Query: 241 YRGRKYNPKKRPFIPLMLWRPHEPVYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK 300
           YRGR YNPKKRPFIPLMLWRPHEPVYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK
Sbjct: 241 YRGRNYNPKKRPFIPLMLWRPHEPVYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK 300

Query: 301 NGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCIL 349
           NGYYGSLVPMVRDAFL CELVRIDCQGLEKSDYKKIGCKLR +V  ++
Sbjct: 301 NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRVMVVSLM 348

[Close]

BLAST of Carg14813 vs. NCBI nr
Match: XP_022147503.1 (CRS2-associated factor 1, mitochondrial [Momordica charantia])

HSP 1 Score: 669.1 bits (1725), Expect = 9.7e-189
Identity = 330/391 (84.40%), Postives = 341/391 (87.21%), Query Frame = 0


Query: 1   MFVIRLFRQNPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLK 60
           MFVIRL RQ PI FA P T  NRCFCYSKLRDHYAFESPPSLSP                
Sbjct: 1   MFVIRLLRQKPILFAPPLTSFNRCFCYSKLRDHYAFESPPSLSPXXXXXXXXXXXXXXXX 60

Query: 61  PRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 120
                  SLDLADKKP+HSDLPFDFQYSYTETS SVRPIGLREPK+SPFGPGRLDRKW+G
Sbjct: 61  XXXXXXXSLDLADKKPRHSDLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDRKWSG 120

Query: 121 VCAPAVEPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQRKKTKRQINL 180
           VCAPAV+PK SS+E  EDPKLEEKRR M ENIQGEPLTGAERKALVE CQ+KKTKRQINL
Sbjct: 121 VCAPAVDPKASSVEGMEDPKLEEKRRFMRENIQGEPLTGAERKALVEKCQKKKTKRQINL 180

Query: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVL 240
           GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVL
Sbjct: 181 GRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVL 240

Query: 241 YRGRKYNPKKRPFIPLMLWRPHEPVYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAK 300
           YRGR Y  KKRPFIPLMLWRPHEP+YPRLIKTTIDGLSI ETKEMRKKGLAVPALT+LAK
Sbjct: 241 YRGRNYITKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIEETKEMRKKGLAVPALTKLAK 300

Query: 301 NGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360
           NGYYGSLVPMVRDAFL CELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR
Sbjct: 301 NGYYGSLVPMVRDAFLSCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWR 360

Query: 361 GKDYRPSESECFLTVRESFDD--VDGNTNCV 390
           G DY+P +S CFLTVR SFDD   +GNTN V
Sbjct: 361 GNDYKPLDSGCFLTVRGSFDDDEANGNTNRV 391

[Close]

BLAST of Carg14813 vs. TAIR10
Match: AT4G31010.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein)

HSP 1 Score: 530.4 bits (1365), Expect = 9.8e-151
Identity = 271/400 (67.75%), Postives = 308/400 (77.00%), Query Frame = 0


Query: 1   MFVIRLFRQNPIPFA------HPHTPSNRCFCYSKLRDHYAFESPPSLS---PKPPPPEL 60
           MF+IRL R NP  F       H  T S+     S+LRD Y F+SPP LS           
Sbjct: 1   MFLIRLSRHNPSSFTLLTRRLHDQTISS-----SRLRDLYNFQSPPPLSXXXXXXXXXXX 60

Query: 61  KPRQNKPLKPRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGP 120
                   KP+Y+PPSSL+    K  HSDLPFDF++SYTE+  +VRPIGLREPK+SPFGP
Sbjct: 61  XXXXXXXXKPQYRPPSSLE--GVKTVHSDLPFDFRFSYTESCSNVRPIGLREPKYSPFGP 120

Query: 121 GRLDRKWTGVCAPAVEPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQR 180
            RLDR+WTGVCAPAV PKV S++  EDPKLEEKRR + E IQG  LT AERK LVE CQR
Sbjct: 121 DRLDREWTGVCAPAVNPKVESVDGVEDPKLEEKRRKVREKIQGASLTEAERKFLVELCQR 180

Query: 181 KKTKRQINLGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTFGKII 240
            KTKRQ+NLGRDGLTHNMLND+YNHWKHAEAVR+KCLGVPT+DMKNV   LEDKTFG+++
Sbjct: 181 NKTKRQVNLGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVV 240

Query: 241 HRHGGFLVLYRGRKYNPKKRPFIPLMLWRPHEPVYPRLIKTTIDGLSINETKEMRKKGLA 300
            +H G LVLYRGR Y+PKKRP IPLMLW+PHEPVYPRLIKTTIDGLSI+ETK MRKKGLA
Sbjct: 241 SKHSGTLVLYRGRNYDPKKRPKIPLMLWKPHEPVYPRLIKTTIDGLSIDETKAMRKKGLA 300

Query: 301 VPALTRLAKNGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTF 360
           VPALT+LAKNGYYGSLVPMVRDAFL  ELVRIDC GLE+ DYKKIG KLRDLVPCILVTF
Sbjct: 301 VPALTKLAKNGYYGSLVPMVRDAFLVSELVRIDCLGLERKDYKKIGAKLRDLVPCILVTF 360

Query: 361 EKEQIVVWRGKDYRPSESE---CFLTVRESFDDVDGNTNC 389
           +KEQ+V+WRGKDY+P + +        RES  D D + +C
Sbjct: 361 DKEQVVIWRGKDYKPPKEDDEYSSFIHRESSIDSDVDLSC 393

[Close]

BLAST of Carg14813 vs. TAIR10
Match: AT5G54890.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein)

HSP 1 Score: 335.5 bits (859), Expect = 4.6e-92
Identity = 165/298 (55.37%), Postives = 211/298 (70.81%), Query Frame = 0


Query: 74  KKPKHSDLPFDFQYSYTETSLSVRPIGLREPK-FSPFGPGRLDRKWTGVCAPAVEPKVSS 133
           K P  SDLPFDF+YSY+ET+  + PIG REPK FSPFGPGRLDRKWTG  A      ++S
Sbjct: 70  KIPVISDLPFDFRYSYSETNPEIEPIGFREPKRFSPFGPGRLDRKWTGTTA------LAS 129

Query: 134 LESTEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQRKKTKRQINLGRDGLTHNMLND 193
            E  +   +EE+ RV+     GE LT  E   L+E  +     RQINLG+ G+THNM++D
Sbjct: 130 PEIDQSQWVEERARVL-----GETLTEDEVTELIERYRHSDCTRQINLGKGGVTHNMIDD 189

Query: 194 IYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGRKYNPKKRP 253
           I+NHWK AEAVRIKCLGVPT+DM N+C  LE+K+ GKI++R+   LVLYRGR Y+PK RP
Sbjct: 190 IHNHWKKAEAVRIKCLGVPTLDMDNICFHLEEKSGGKIVYRNINILVLYRGRNYDPKSRP 249

Query: 254 FIPLMLWRPHEPVYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAKNGYYGSLVPMVR 313
            IPLMLW+PH P+YPRL+K   DGL   ETKEMR +GL  PAL +L +NG Y ++V  VR
Sbjct: 250 IIPLMLWKPHPPIYPRLVKNVADGLEFEETKEMRNRGLHSPALMKLTRNGVYVNVVGRVR 309

Query: 314 DAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYRPSESE 371
           + F   E+VR+DC  +  SD K+IG KL+++VPC+ + F+ EQI++WRGK  R  E E
Sbjct: 310 EEFETEEIVRLDCTHVGMSDCKRIGVKLKEMVPCVPILFKDEQIILWRGK--RTGEEE 354

[Close]

BLAST of Carg14813 vs. TAIR10
Match: AT2G20020.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein)

HSP 1 Score: 295.4 bits (755), Expect = 5.3e-80
Identity = 168/386 (43.52%), Postives = 226/386 (58.55%), Query Frame = 0


Query: 18  HTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNK----PLKPRYKP--PSSLDL 77
           HT  +           +     PSL      P  + + +K    P +P+ KP  P S   
Sbjct: 69  HTHDSEAAAAEPKTSPFRSRGTPSLPSARSIPGRRSKYSKPDSGPNRPKNKPRVPDSPPQ 128

Query: 78  ADKKPK-----------HSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG 137
            D KP+            +  PF+F+YSYTET   V+P+ LREP ++PFGP  + R WTG
Sbjct: 129 LDAKPEVKLSEDGLTYVINGAPFEFKYSYTETP-KVKPLKLREPAYAPFGPTTMGRPWTG 188

Query: 138 -VCAPAVEPKVSSLESTEDPKLEEK----------------RRVMW--ENIQGEPLTGAE 197
               P  +      +S   P + +K                 R ++  E I GEPLT  E
Sbjct: 189 RAPLPQSQKTPREFDSFRLPPVGKKGLKPVQKPGPFRPGVGPRYVYSKEEILGEPLTKEE 248

Query: 198 RKALVETCQRKKTKRQINLGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQ 257
            + LV +C   KT RQ+N+GRDGLTHNMLN+I++ WK     +IKC GV TVDM NVC Q
Sbjct: 249 VRELVTSC--LKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMDNVCEQ 308

Query: 258 LEDKTFGKIIHRHGGFLVLYRGRKYNPKKRPFIPLMLWRPHEPVYPRLIKTTIDGLSINE 317
           LE+K  GK+I+R GG L L+RGR YN + RP  PLMLW+P  PVYPRLI+   +GL+  E
Sbjct: 309 LEEKIGGKVIYRRGGVLFLFRGRNYNHRTRPRFPLMLWKPVAPVYPRLIQQVPEGLTRQE 368

Query: 318 TKEMRKKGLAVPALTRLAKNGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLR 368
              MR+KG  +  + +L KNG Y  LV  V++AF  CELVRIDCQG++ SD++KIG KL+
Sbjct: 369 ATNMRRKGRELMPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMKGSDFRKIGAKLK 428

[Close]

BLAST of Carg14813 vs. TAIR10
Match: AT1G23400.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein)

HSP 1 Score: 275.4 bits (703), Expect = 5.7e-74
Identity = 158/381 (41.47%), Postives = 219/381 (57.48%), Query Frame = 0


Query: 11  PIPFAHPHTPSNRCFCYSKLRDHYAFESP--PSLSPKPPPPELKPRQNKPLKP---RYKP 70
           PIP    + PSNR    ++  +H    +P  P  +P    P  + R  KP+K        
Sbjct: 35  PIPIP-KYAPSNR--NRNQKTNHQTDTNPKKPQSNPALKLPHHRTRYYKPVKEGVISSDG 94

Query: 71  PSSLDLADKKPKHS--DLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTGVCA 130
             ++ + D    +     PF+FQ+SY+ET   V+P+G+REP F PF P  + R WTG   
Sbjct: 95  DRTILIGDSGVSYQLPGAPFEFQFSYSETP-KVKPVGIREPAFMPFAPPTMPRPWTGKAP 154

Query: 131 PAVEPKVSSLESTEDPKLEEKRRVMW-------------------ENIQGEPLTGAERKA 190
                K   L  + +P    K  V +                   E + GEPL   E+  
Sbjct: 155 LKKSKKKIPLFDSFNPPPAGKSGVKYVEMPGPLPFGRYPKEGMNREEVLGEPLKRWEKGM 214

Query: 191 LVETCQRKKTKRQINLGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLED 250
           L++        RQ+NLGRDG THNML  I++HWK     +++C GVPTVDM NVC  LE+
Sbjct: 215 LIK--PHMHDNRQVNLGRDGFTHNMLELIHSHWKRRRVCKVRCKGVPTVDMNNVCRVLEE 274

Query: 251 KTFGKIIHRHGGFLVLYRGRKYNPKKRPFIPLMLWRPHEPVYPRLIKTTIDGLSINETKE 310
           KT G+IIHR GG + L+RGR YN + RP  PLMLW+P  PVYP+LI+   +GL+  E  E
Sbjct: 275 KTGGEIIHRVGGVVYLFRGRNYNYRTRPQYPLMLWKPAAPVYPKLIQEVPEGLTKEEAHE 334

Query: 311 MRKKGLAVPALTRLAKNGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLV 366
            R KG ++  + +L+KNG Y SLV  VRDAF    LV++DC GLE SDYKKIG KL++LV
Sbjct: 335 FRVKGKSLRPICKLSKNGVYVSLVKDVRDAFELSSLVKVDCPGLEPSDYKKIGAKLKELV 394

[Close]

BLAST of Carg14813 vs. TAIR10
Match: AT3G18390.1 (CRS1 / YhbY (CRM) domain-containing protein)

HSP 1 Score: 62.8 bits (151), Expect = 5.8e-10
Identity = 63/283 (22.26%), Postives = 104/283 (36.75%), Query Frame = 0


Query: 177 QINLGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGG 236
           +IN+ + GLT  ++  IY+ W+  E VR+K   V   DMK     +E +T G +I R G 
Sbjct: 261 RINIPKAGLTQAVMEKIYDTWRKEELVRLKFHEVLARDMKTAHEIVERRTGGMVIWRAGS 320

Query: 237 FLVLYRGRKY-----------NPKKRPFIPLMLWRPHE---------------------- 296
            +V+YRG  Y            PK+  F+P +     E                      
Sbjct: 321 VMVVYRGLDYKGPPVISNQMAGPKETLFVPDVSSAGDEATNAKDNQSAPLVIKDPIIKNP 380

Query: 297 ---------------------------------PVYPRLIKTTIDG-------------- 356
                                            PV   L+  TI G              
Sbjct: 381 IRKENMTEEEVEFNSLLDSLGPRFQEWWGTGVLPVDADLLPPTIPGYKTPFRLLPTGMRS 440

Query: 357 -LSINETKEMRKKGLAVPALTRLAKNGYYGSLVPMVRDAFLCCELVRIDC-QGLEKSDYK 378
            L+  E   +RK G  +P    L +N  +  L   +   +    + +I   +G++ ++ K
Sbjct: 441 NLTNAEMTNLRKIGKTLPCHFALGRNRNHQGLAAAILQIWEKSLIAKIAVKRGIQNTNNK 500

[Close]

BLAST of Carg14813 vs. Swiss-Prot
Match: sp|Q8VYD9|CAF1M_ARATH (CRS2-associated factor 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g31010 PE=2 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 1.8e-149
Identity = 271/400 (67.75%), Postives = 308/400 (77.00%), Query Frame = 0


Query: 1   MFVIRLFRQNPIPFA------HPHTPSNRCFCYSKLRDHYAFESPPSLS---PKPPPPEL 60
           MF+IRL R NP  F       H  T S+     S+LRD Y F+SPP LS           
Sbjct: 1   MFLIRLSRHNPSSFTLLTRRLHDQTISS-----SRLRDLYNFQSPPPLSXXXXXXXXXXX 60

Query: 61  KPRQNKPLKPRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGP 120
                   KP+Y+PPSSL+    K  HSDLPFDF++SYTE+  +VRPIGLREPK+SPFGP
Sbjct: 61  XXXXXXXXKPQYRPPSSLE--GVKTVHSDLPFDFRFSYTESCSNVRPIGLREPKYSPFGP 120

Query: 121 GRLDRKWTGVCAPAVEPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQR 180
            RLDR+WTGVCAPAV PKV S++  EDPKLEEKRR + E IQG  LT AERK LVE CQR
Sbjct: 121 DRLDREWTGVCAPAVNPKVESVDGVEDPKLEEKRRKVREKIQGASLTEAERKFLVELCQR 180

Query: 181 KKTKRQINLGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTFGKII 240
            KTKRQ+NLGRDGLTHNMLND+YNHWKHAEAVR+KCLGVPT+DMKNV   LEDKTFG+++
Sbjct: 181 NKTKRQVNLGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVV 240

Query: 241 HRHGGFLVLYRGRKYNPKKRPFIPLMLWRPHEPVYPRLIKTTIDGLSINETKEMRKKGLA 300
            +H G LVLYRGR Y+PKKRP IPLMLW+PHEPVYPRLIKTTIDGLSI+ETK MRKKGLA
Sbjct: 241 SKHSGTLVLYRGRNYDPKKRPKIPLMLWKPHEPVYPRLIKTTIDGLSIDETKAMRKKGLA 300

Query: 301 VPALTRLAKNGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTF 360
           VPALT+LAKNGYYGSLVPMVRDAFL  ELVRIDC GLE+ DYKKIG KLRDLVPCILVTF
Sbjct: 301 VPALTKLAKNGYYGSLVPMVRDAFLVSELVRIDCLGLERKDYKKIGAKLRDLVPCILVTF 360

Query: 361 EKEQIVVWRGKDYRPSESE---CFLTVRESFDDVDGNTNC 389
           +KEQ+V+WRGKDY+P + +        RES  D D + +C
Sbjct: 361 DKEQVVIWRGKDYKPPKEDDEYSSFIHRESSIDSDVDLSC 393

[Close]

BLAST of Carg14813 vs. Swiss-Prot
Match: sp|Q6Z4U2|CAF1M_ORYSJ (CRS2-associated factor 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0174900 PE=3 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 1.4e-125
Identity = 238/395 (60.25%), Postives = 282/395 (71.39%), Query Frame = 0


Query: 17  PHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPLKPRYKPPSSLDLADKKP 76
           P  PS R    S L D Y F  P SL+P                       SLD   +  
Sbjct: 14  PRRPSVRRL--SGLLDRYGFVPPASLTPHSAXXXXXXXXXXXXXXXXXXXXSLDRGGRPA 73

Query: 77  KHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTGVCAPAVEPKVSSLEST 136
             SDLPFDF++SYTE+S   +PIGLREPK+SPFGPGRLDR WTG+CAPAV+  +    + 
Sbjct: 74  ARSDLPFDFRFSYTESSPGDKPIGLREPKYSPFGPGRLDRPWTGLCAPAVDTTLRDAHA- 133

Query: 137 EDP------KLEEKRRVMWENIQGEPLTGAERKALVETCQRKKTKRQINLGRDGLTHNML 196
           +DP      +LEE RR   E + GEPLT AER  LV  CQ+ +TK+QINLGRDGLTHNML
Sbjct: 134 DDPAPAAERELEEARRRERERVLGEPLTPAERAFLVSKCQKSRTKKQINLGRDGLTHNML 193

Query: 197 NDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGRKYNPKK 256
           NDI+NHWK+ EAVR+KCLGVPTVDM+NVC QLEDKT G IIHRHGG L+LYRGR YNPKK
Sbjct: 194 NDIHNHWKNDEAVRVKCLGVPTVDMQNVCHQLEDKTGGLIIHRHGGQLILYRGRHYNPKK 253

Query: 257 RPFIPLMLWRPHEPVYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAKNGYYGSLVPM 316
           RP IPLMLW+P EPVYPRLIKTTI+GL++ ETKEMRKKGL VP LT+LAKNGYY SLVPM
Sbjct: 254 RPVIPLMLWKPAEPVYPRLIKTTIEGLTVEETKEMRKKGLYVPVLTKLAKNGYYASLVPM 313

Query: 317 VRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYRPSESE 376
           VRDAFL  ELVRID +GL KSDY+KIG KLRDLVPCI+V+F+KEQI+VWRGKDY  +  +
Sbjct: 314 VRDAFLTDELVRIDSKGLPKSDYRKIGVKLRDLVPCIIVSFDKEQIIVWRGKDYNGTIQD 373

Query: 377 CFLTVRESFDDVDGNTNCVDNENFDDECSDAGFQS 406
              T + S   ++  +   ++EN D E + + + S
Sbjct: 374 --NTQKTSVSVLEEESAGAESENGDQEQASSDWAS 403

[Close]

BLAST of Carg14813 vs. Swiss-Prot
Match: sp|Q9FFU1|CAF2M_ARATH (CRS2-associated factor 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g54890 PE=2 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 8.3e-91
Identity = 165/298 (55.37%), Postives = 211/298 (70.81%), Query Frame = 0


Query: 74  KKPKHSDLPFDFQYSYTETSLSVRPIGLREPK-FSPFGPGRLDRKWTGVCAPAVEPKVSS 133
           K P  SDLPFDF+YSY+ET+  + PIG REPK FSPFGPGRLDRKWTG  A      ++S
Sbjct: 70  KIPVISDLPFDFRYSYSETNPEIEPIGFREPKRFSPFGPGRLDRKWTGTTA------LAS 129

Query: 134 LESTEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQRKKTKRQINLGRDGLTHNMLND 193
            E  +   +EE+ RV+     GE LT  E   L+E  +     RQINLG+ G+THNM++D
Sbjct: 130 PEIDQSQWVEERARVL-----GETLTEDEVTELIERYRHSDCTRQINLGKGGVTHNMIDD 189

Query: 194 IYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGRKYNPKKRP 253
           I+NHWK AEAVRIKCLGVPT+DM N+C  LE+K+ GKI++R+   LVLYRGR Y+PK RP
Sbjct: 190 IHNHWKKAEAVRIKCLGVPTLDMDNICFHLEEKSGGKIVYRNINILVLYRGRNYDPKSRP 249

Query: 254 FIPLMLWRPHEPVYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAKNGYYGSLVPMVR 313
            IPLMLW+PH P+YPRL+K   DGL   ETKEMR +GL  PAL +L +NG Y ++V  VR
Sbjct: 250 IIPLMLWKPHPPIYPRLVKNVADGLEFEETKEMRNRGLHSPALMKLTRNGVYVNVVGRVR 309

Query: 314 DAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYRPSESE 371
           + F   E+VR+DC  +  SD K+IG KL+++VPC+ + F+ EQI++WRGK  R  E E
Sbjct: 310 EEFETEEIVRLDCTHVGMSDCKRIGVKLKEMVPCVPILFKDEQIILWRGK--RTGEEE 354

[Close]

BLAST of Carg14813 vs. Swiss-Prot
Match: sp|Q0J7J7|CAF2M_ORYSJ (CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0188000 PE=2 SV=2)

HSP 1 Score: 323.2 bits (827), Expect = 4.3e-87
Identity = 157/289 (54.33%), Postives = 197/289 (68.17%), Query Frame = 0


Query: 75  KPKHSDLPFDFQYSYTETSLSVRPIGLREP-KFSPFGPGRLDRKWTGVCAPAVEPKVSSL 134
           +P  SDLPFDF+YSY+ET  + RPIG REP +FSPFGPGRLDR W GV A          
Sbjct: 73  EPASSDLPFDFRYSYSETDPAWRPIGFREPTRFSPFGPGRLDRPWDGVAAAXXXXXXXXX 132

Query: 135 ESTEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQRKKTKRQINLGRDGLTHNMLNDI 194
             T             E + GEPL   E   LVE  +     RQINLG+ G+THNM++DI
Sbjct: 133 XXTSR-----------EEVLGEPLAEEEVAQLVERYRHSDCSRQINLGKGGVTHNMIDDI 192

Query: 195 YNHWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGRKYNPKKRPF 254
           +NHWK AEAVRIKCLGVPT+DM N+C  LEDKT GK+I+R+   L+LYRGR Y+PK+RP 
Sbjct: 193 HNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVIYRNINILILYRGRNYDPKQRPQ 252

Query: 255 IPLMLWRPHEPVYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAKNGYYGSLVPMVRD 314
           IPLMLW+P  P+YPRL++   DGL+  +TKE+R  GL    L +L +NG Y ++V  VR+
Sbjct: 253 IPLMLWKPLAPIYPRLVQNVADGLTFEKTKELRNTGLNSSPLMKLTRNGVYVNVVDRVRE 312

Query: 315 AFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGK 363
           AF   E+VR+DC  +  SD KKIG KLRDLVPC+ + F+ EQI++WRGK
Sbjct: 313 AFKTVEVVRLDCSHVGSSDCKKIGVKLRDLVPCVPLLFKDEQIILWRGK 350

[Close]

BLAST of Carg14813 vs. Swiss-Prot
Match: sp|Q5VMQ5|CAF1P_ORYSJ (CRS2-associated factor 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0495900 PE=2 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.1e-79
Identity = 152/309 (49.19%), Postives = 196/309 (63.43%), Query Frame = 0


Query: 82  PFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTG-----------------VCAP 141
           PF+FQYSYTET    RP+ LRE  F PFGP    R WTG                 +  P
Sbjct: 91  PFEFQYSYTETP-RARPVALREAPFLPFGPEVTPRPWTGRKPLPKSRKELPEFDSFMLPP 150

Query: 142 AVEPKVSSLEST------EDPKLEEKRRVMWENIQGEPLTGAERKALVETCQRKKTKRQI 201
             +  V  ++S        +P+ +   R   E + GEPLT  E   LV+     KTKRQ+
Sbjct: 151 PGKKGVKPVQSPGPFLAGTEPRYQAASR---EEVLGEPLTKEEVDELVKA--TLKTKRQL 210

Query: 202 NLGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFL 261
           N+GRDGLTHNML +I++HWK     +IKC GV TVDM NVC QLE+K  GK+IH  GG +
Sbjct: 211 NIGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTVDMDNVCQQLEEKVGGKVIHHQGGVI 270

Query: 262 VLYRGRKYNPKKRPFIPLMLWRPHEPVYPRLIKTTIDGLSINETKEMRKKGLAVPALTRL 321
            L+RGR YN + RP  PLMLW+P  PVYPRL+K   DGL+ +E ++MRK+G  +P + +L
Sbjct: 271 FLFRGRNYNYRTRPIYPLMLWKPAAPVYPRLVKKIPDGLTPDEAEDMRKRGRQLPPICKL 330

Query: 322 AKNGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVV 368
            KNG Y +LV  VR+AF  C+LVR+DC GL KSD +KIG KL+DLVPC L++FE E I++
Sbjct: 331 GKNGVYLNLVKQVREAFEACDLVRVDCSGLNKSDCRKIGAKLKDLVPCTLLSFEFEHILM 390

[Close]

BLAST of Carg14813 vs. TrEMBL
Match: tr|A0A0A0L906|A0A0A0L906_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G124850 PE=4 SV=1)

HSP 1 Score: 638.3 bits (1645), Expect = 1.2e-179
Identity = 315/393 (80.15%), Postives = 342/393 (87.02%), Query Frame = 0


Query: 1   MFVIR-LFRQNPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPL 60
           MFVIR LFRQ  I  +HP+T  N CF YSKLR+ YAFE+PPS+S                
Sbjct: 1   MFVIRTLFRQKSI--SHPYTSFNPCFFYSKLRELYAFEAPPSVS---XXXXXXXXXXXXX 60

Query: 61  KPRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWT 120
              YKPPSSLDL  KKP+ S+LPFDFQYSYTETS SVRPIGLREPK+SPFGPGRLDR+WT
Sbjct: 61  XXXYKPPSSLDLGGKKPRRSNLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDREWT 120

Query: 121 GVCAPAVEPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQRKKTKRQIN 180
           GVCAPA  PK +S+E  EDP+LE KRRVM E IQGEPL GAERKALVE CQ+ KTKRQIN
Sbjct: 121 GVCAPAANPKATSVEGMEDPRLEGKRRVMREAIQGEPLPGAERKALVEKCQKNKTKRQIN 180

Query: 181 LGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLV 240
           LGRDGLTHNMLNDI+NHW+H EAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLV
Sbjct: 181 LGRDGLTHNMLNDIHNHWRHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLV 240

Query: 241 LYRGRKYNPKKRPFIPLMLWRPHEPVYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLA 300
           LYRGR YNPKKRPFIPLMLWRPHEP+YPRLIKTTIDGLSI+ETKEMRKKGLAVPALT+LA
Sbjct: 241 LYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLA 300

Query: 301 KNGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVW 360
           KNGYYGSLVPMVRDAFL CELVRIDC+GLE+SDYKKIGCKLRDLVPCILVTF+KEQIVVW
Sbjct: 301 KNGYYGSLVPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVW 360

Query: 361 RGKDYRPSESECFLTVRESFDDVDGNTNCVDNE 393
           RGKDY+P ++  +LTVRE+FDDVDGNT CVD+E
Sbjct: 361 RGKDYQPLDTG-YLTVRETFDDVDGNTGCVDDE 387

[Close]

BLAST of Carg14813 vs. TrEMBL
Match: tr|A0A1S3AVP3|A0A1S3AVP3_CUCME (CRS2-associated factor 1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103483319 PE=4 SV=1)

HSP 1 Score: 634.0 bits (1634), Expect = 2.3e-178
Identity = 313/393 (79.64%), Postives = 340/393 (86.51%), Query Frame = 0


Query: 1   MFVIR-LFRQNPIPFAHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQNKPL 60
           MFVIR + R+  IP   PHT  N C  YSKLR+ YAFE P S+                 
Sbjct: 1   MFVIRTISREKSIP--RPHTSFNPCSFYSKLRELYAFEFPSSV--XXXXXXXXXXXXXXX 60

Query: 61  KPRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWT 120
              YKPPSSLDL DKKP+ S+LPFDFQYSYTETS SVRPIGLREPK+SPFGPGRLDRKWT
Sbjct: 61  XXXYKPPSSLDLGDKKPRRSNLPFDFQYSYTETSPSVRPIGLREPKYSPFGPGRLDRKWT 120

Query: 121 GVCAPAVEPKVSSLESTEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQRKKTKRQIN 180
           GVCAPAV+PK +S+E  EDP+LEEKRRVM EN+QGEPLTGAERKALVE CQ+ KTKRQIN
Sbjct: 121 GVCAPAVDPKATSVEGMEDPRLEEKRRVMRENLQGEPLTGAERKALVEKCQKNKTKRQIN 180

Query: 181 LGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLV 240
           LGRDGLTHNMLNDI+NHWKH EAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGG LV
Sbjct: 181 LGRDGLTHNMLNDIHNHWKHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGLLV 240

Query: 241 LYRGRKYNPKKRPFIPLMLWRPHEPVYPRLIKTTIDGLSINETKEMRKKGLAVPALTRLA 300
           LYRGR YNPKKRPFIPLMLWRPHEP+YPRLIKTTIDGLSI+ETKEMRKKGLAVPALT+LA
Sbjct: 241 LYRGRNYNPKKRPFIPLMLWRPHEPIYPRLIKTTIDGLSIDETKEMRKKGLAVPALTKLA 300

Query: 301 KNGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVW 360
           KNGYYGSL+PMVRDAFL CELVRIDC+GLE+SDYKKIGCKLRDLVPCILVTF+KEQIVVW
Sbjct: 301 KNGYYGSLIPMVRDAFLSCELVRIDCKGLERSDYKKIGCKLRDLVPCILVTFDKEQIVVW 360

Query: 361 RGKDYRPSESECFLTVRESFDDVDGNTNCVDNE 393
           RGKDY+P +   +LTVRE+FDDVDGNT CVD++
Sbjct: 361 RGKDYQPLDIG-YLTVRETFDDVDGNTGCVDDK 388

[Close]

BLAST of Carg14813 vs. TrEMBL
Match: tr|E6NU21|E6NU21_JATCU (JHL05D22.2 protein OS=Jatropha curcas OX=180498 GN=JHL05D22.2 PE=4 SV=1)

HSP 1 Score: 595.5 bits (1534), Expect = 9.0e-167
Identity = 294/383 (76.76%), Postives = 322/383 (84.07%), Query Frame = 0


Query: 28  SKLRDHYAFESPPSLSPKPPPPELKPRQNKPLKPRYKPPSSLDLADKKPKHSDLPFDFQY 87
           SKL DHYAF  PPSLSP+  P    P   K  KP Y+PPS+LD   KKP HSDLPFDF+Y
Sbjct: 34  SKLHDHYAFRPPPSLSPQ-EPDNPNPTTRKKQKPLYRPPSTLDRTGKKPTHSDLPFDFRY 93

Query: 88  SYTETSLSVRPIGLREPKFSPFGPGRLDRKWTGVCAPAVEPKVSSLESTEDPKLEEKRRV 147
           SYTE+S SVRPIGLREPK+SPFGP RLDR WTGVCAPAV+PKV SL+ T+DP LEEKR++
Sbjct: 94  SYTESSQSVRPIGLREPKYSPFGPDRLDRSWTGVCAPAVDPKVKSLDGTDDPNLEEKRKL 153

Query: 148 MWENIQGEPLTGAERKALVETCQRKKTKRQINLGRDGLTHNMLNDIYNHWKHAEAVRIKC 207
           M E IQG+PLT AERK LV  CQR KTKRQINLGRDGLTHNMLNDI+NHWKHAEAVRIKC
Sbjct: 154 MREKIQGDPLTNAERKILVAQCQRNKTKRQINLGRDGLTHNMLNDIHNHWKHAEAVRIKC 213

Query: 208 LGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGRKYNPKKRPFIPLMLWRPHEPVYP 267
           LGVPTVDMKNVC+QLEDKTFGKIIHRH G LVLYRGR YNPKKRP IPLM+WRPHEP+YP
Sbjct: 214 LGVPTVDMKNVCSQLEDKTFGKIIHRHCGSLVLYRGRNYNPKKRPVIPLMMWRPHEPIYP 273

Query: 268 RLIKTTIDGLSINETKEMRKKGLAVPALTRLAKNGYYGSLVPMVRDAFLCCELVRIDCQG 327
           RLIKTTIDGLSI+ETKEMRK+GLAVPALT+LAKNGYY SLVPMVRDAFL  ELVRIDCQG
Sbjct: 274 RLIKTTIDGLSIDETKEMRKRGLAVPALTKLAKNGYYASLVPMVRDAFLTNELVRIDCQG 333

Query: 328 LEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYRPSESECFLTVRESFDDVDGNTN 387
           LEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDY+P E       RE FDD +G++ 
Sbjct: 334 LEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYKPPEDGELFADREFFDDPEGSSM 393

Query: 388 CVDNEN-FDDECSDAGFQSGNSE 410
            +  ++   D+ S  GF SG+ E
Sbjct: 394 GLSEDSCSSDDNSSPGFYSGDDE 415

[Close]

BLAST of Carg14813 vs. TrEMBL
Match: tr|A0A2I4HWL2|A0A2I4HWL2_9ROSI (CRS2-associated factor 1, mitochondrial isoform X1 OS=Juglans regia OX=51240 GN=LOC109022176 PE=4 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 6.5e-165
Identity = 294/384 (76.56%), Postives = 319/384 (83.07%), Query Frame = 0


Query: 28  SKLRDHYAFESPPSLSPKPPPPELKPRQN--KPLKPRYKPPSSLDLADKKPKHSDLPFDF 87
           SKL  HY+F+ PPSLS  P  P   P  N  K  KPRY+PPSSLD    KP  SDLPFDF
Sbjct: 34  SKLHQHYSFKPPPSLSSTPQNPNRFPSVNTKKKQKPRYRPPSSLDRTGIKPIKSDLPFDF 93

Query: 88  QYSYTETSLSVRPIGLREPKFSPFGPGRLDRKWTGVCAPAVEPKVSSLESTEDPKLEEKR 147
           +YSYTE+S +VRPIGLREPK+SPFGPGRLDR+WTGVCAPAV+PK  S+E  +DPKLEEKR
Sbjct: 94  RYSYTESSPTVRPIGLREPKYSPFGPGRLDREWTGVCAPAVDPKARSVEGADDPKLEEKR 153

Query: 148 RVMWENIQGEPLTGAERKALVETCQRKKTKRQINLGRDGLTHNMLNDIYNHWKHAEAVRI 207
           R M E +QGEPLTGAER+ LVE CQR  TK Q+NLGRDGLTHNMLNDI+N WKHAEAVRI
Sbjct: 154 RKMRERVQGEPLTGAERRILVEKCQRCNTKTQVNLGRDGLTHNMLNDIHNSWKHAEAVRI 213

Query: 208 KCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGRKYNPKKRPFIPLMLWRPHEPV 267
           KCLGVPTVDM+NVCTQLEDKTFGKIIHRHG FLVL+RGR Y+PKKRP IPLMLWRPHEPV
Sbjct: 214 KCLGVPTVDMRNVCTQLEDKTFGKIIHRHGSFLVLFRGRNYHPKKRPMIPLMLWRPHEPV 273

Query: 268 YPRLIKTTIDGLSINETKEMRKKGLAVPALTRLAKNGYYGSLVPMVRDAFLCCELVRIDC 327
           YPRLIKTTIDGLSI ETKEMRK+GLAVPALT+LAKNGYYGSLVPMVRDAFLC ELVRIDC
Sbjct: 274 YPRLIKTTIDGLSIEETKEMRKRGLAVPALTKLAKNGYYGSLVPMVRDAFLCSELVRIDC 333

Query: 328 QGLEKSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYRPSESECFLTVRESFDDVDGN 387
           QGLE+SDYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDY P E   FL  RE FDD  GN
Sbjct: 334 QGLERSDYKKIGCKLRDLVPCILVTFEKEQIVVWRGKDYEPVEDGYFLPEREIFDDPVGN 393

Query: 388 TNCVDNENFDDECSDAGFQSGNSE 410
             C   E+ D     A  ++G+ E
Sbjct: 394 LVC-SGEDSDSLDGTAANRTGDDE 416

[Close]

BLAST of Carg14813 vs. TrEMBL
Match: tr|A0A251QG53|A0A251QG53_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G151400 PE=4 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 6.5e-165
Identity = 305/420 (72.62%), Postives = 330/420 (78.57%), Query Frame = 0


Query: 1   MFVIRLFRQNPIPF-----AHPHTPSNRCFCYSKLRDHYAFESPPSLSPKPPPPELKPRQ 60
           MF+ RL R NP PF      H   P       SKL D Y+F+ PPSLSP        P  
Sbjct: 1   MFLTRLSRLNPNPFLLILTRHLSNP-------SKLHDRYSFKPPPSLSPNTQGQ--NPNH 60

Query: 61  NKP---LKPRYKPPSSLDLADKKPKHSDLPFDFQYSYTETSLSVRPIGLREPKFSPFGPG 120
           N P    KP+Y+PPSSLD   +KP HSDLPFDF+YSYTE+S +VRPIGLREPK+SPFGPG
Sbjct: 61  NNPKKKQKPQYRPPSSLDRTGQKPIHSDLPFDFRYSYTESSPTVRPIGLREPKYSPFGPG 120

Query: 121 RLDRKWTGVCAPAVEPKVSSLE-STEDPKLEEKRRVMWENIQGEPLTGAERKALVETCQR 180
           R+DR+W GVCAPAV+PKV S+E + EDPKLEEKR+   + +QGEPLT AERK LV+ CQR
Sbjct: 121 RIDREWIGVCAPAVDPKVRSVEGAEEDPKLEEKRKRRRQKVQGEPLTPAERKILVDKCQR 180

Query: 181 KKTKRQINLGRDGLTHNMLNDIYNHWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTFGKII 240
            KTKRQINLGRDGLTHNMLNDI NHWKH EAVRIKCLGVPTVDMKNVCTQLEDKTFGKII
Sbjct: 181 PKTKRQINLGRDGLTHNMLNDIQNHWKHDEAVRIKCLGVPTVDMKNVCTQLEDKTFGKII 240

Query: 241 HRHGGFLVLYRGRKYNPKKRPFIPLMLWRPHEPVYPRLIKTTIDGLSINETKEMRKKGLA 300
           HRHGG LVLYRGR Y PKKRP IPLMLWRPHEPVYPRLIKTTIDGLSI ETKEMRK+GLA
Sbjct: 241 HRHGGVLVLYRGRNYKPKKRPVIPLMLWRPHEPVYPRLIKTTIDGLSIEETKEMRKRGLA 300

Query: 301 VPALTRLAKNGYYGSLVPMVRDAFLCCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTF 360
           VPALT+LAKNGYYGSLV MVRDAF+CCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTF
Sbjct: 301 VPALTKLAKNGYYGSLVSMVRDAFICCELVRIDCQGLEKSDYKKIGCKLRDLVPCILVTF 360

Query: 361 EKEQIVVWRGKDYRPSESECFLTVRESFDD-----VDGNTNCVDNENFDDECSDAGFQSG 407
           EKEQIVVWRGKDY+P E   FL  RE FD+     V G   C    N D   S+  F SG
Sbjct: 361 EKEQIVVWRGKDYKPLEDGYFLPDRELFDNPEGDLVSGKEGC---GNSDGSSSEKEFDSG 408

The following BLAST results are available for this feature:

BLAST of Carg14813 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023526250.1	1.0e-238	96.85	CRS2-associated factor 1, mitochondrial [Cucurbita pepo subsp. pepo]	[more]
XP_022924354.1	3.9e-238	96.61	CRS2-associated factor 1, mitochondrial isoform X1 [Cucurbita moschata]	[more]
XP_022980305.1	2.6e-226	92.46	CRS2-associated factor 1, mitochondrial [Cucurbita maxima]	[more]
XP_022924355.1	5.5e-200	96.55	CRS2-associated factor 1, mitochondrial isoform X2 [Cucurbita moschata]	[more]
XP_022147503.1	9.7e-189	84.40	CRS2-associated factor 1, mitochondrial [Momordica charantia]	[more]

BLAST of Carg14813 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G31010.1	9.8e-151	67.75	RNA-binding CRS1 / YhbY (CRM) domain-containing protein	[more]
AT5G54890.1	4.6e-92	55.37	RNA-binding CRS1 / YhbY (CRM) domain-containing protein	[more]
AT2G20020.1	5.3e-80	43.52	RNA-binding CRS1 / YhbY (CRM) domain-containing protein	[more]
AT1G23400.1	5.7e-74	41.47	RNA-binding CRS1 / YhbY (CRM) domain-containing protein	[more]
AT3G18390.1	5.8e-10	22.26	CRS1 / YhbY (CRM) domain-containing protein	[more]

BLAST of Carg14813 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8VYD9\|CAF1M_ARATH	1.8e-149	67.75	CRS2-associated factor 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g3...	[more]
sp\|Q6Z4U2\|CAF1M_ORYSJ	1.4e-125	60.25	CRS2-associated factor 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947...	[more]
sp\|Q9FFU1\|CAF2M_ARATH	8.3e-91	55.37	CRS2-associated factor 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g5...	[more]
sp\|Q0J7J7\|CAF2M_ORYSJ	4.3e-87	54.33	CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947...	[more]
sp\|Q5VMQ5\|CAF1P_ORYSJ	1.1e-79	49.19	CRS2-associated factor 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947...	[more]

BLAST of Carg14813 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L906\|A0A0A0L906_CUCSA	1.2e-179	80.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G124850 PE=4 SV=1	[more]
tr\|A0A1S3AVP3\|A0A1S3AVP3_CUCME	2.3e-178	79.64	CRS2-associated factor 1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103483319 ...	[more]
tr\|E6NU21\|E6NU21_JATCU	9.0e-167	76.76	JHL05D22.2 protein OS=Jatropha curcas OX=180498 GN=JHL05D22.2 PE=4 SV=1	[more]
tr\|A0A2I4HWL2\|A0A2I4HWL2_9ROSI	6.5e-165	76.56	CRS2-associated factor 1, mitochondrial isoform X1 OS=Juglans regia OX=51240 GN=...	[more]
tr\|A0A251QG53\|A0A251QG53_PRUPE	6.5e-165	72.62	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G151400 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR035920	YhbY_like_sf
IPR001890	RNA-binding_CRM

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg14813-RA	Carg14813-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001890	RNA-binding, CRM domain	SMART	SM01103	CRS1_YhbY_2	coord: 277..360 e-value: 2.5E-9 score: 47.0 coord: 157..242 e-value: 1.1E-18 score: 78.1
IPR001890	RNA-binding, CRM domain	PFAM	PF01985	CRS1_YhbY	coord: 279..360 e-value: 4.3E-9 score: 36.4 coord: 157..242 e-value: 3.0E-19 score: 68.9
IPR001890	RNA-binding, CRM domain	PROSITE	PS51295	CRM	coord: 155..253 score: 18.81
IPR001890	RNA-binding, CRM domain	PROSITE	PS51295	CRM	coord: 275..371 score: 16.686
IPR035920	YhbY-like superfamily	GENE3D	G3DSA:3.30.110.60		coord: 156..255 e-value: 1.2E-9 score: 39.8
IPR035920	YhbY-like superfamily	SUPERFAMILY	SSF75471	YhbY-like	coord: 277..366
IPR035920	YhbY-like superfamily	SUPERFAMILY	SSF75471	YhbY-like	coord: 156..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..54
None	No IPR available	PANTHER	PTHR31846	FAMILY NOT NAMED	coord: 2..400
None	No IPR available	PANTHER	PTHR31846:SF9	CRS2-ASSOCIATED FACTOR 1, MITOCHONDRIAL	coord: 2..400

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg14813	Cla021279	Watermelon (97103) v1	carwmB0617
Carg14813	Csa3G124850	Cucumber (Chinese Long) v2	carcuB0644
Carg14813	MELO3C006157	Melon (DHL92) v3.5.1	carmeB0622
Carg14813	ClCG05G001970	Watermelon (Charleston Gray)	carwcgB0602
Carg14813	CSPI03G09260	Wild cucumber (PI 183967)	carcpiB0651
Carg14813	Cucsa.257930	Cucumber (Gy14) v1	carcgyB0693
Carg14813	CmaCh14G020010	Cucurbita maxima (Rimu)	carcmaB0874
Carg14813	CmoCh14G020620	Cucurbita moschata (Rifu)	carcmoB0850
Carg14813	Lsi05G019930	Bottle gourd (USVL1VR-Ls)	carlsiB565
Carg14813	Cp4.1LG03g16890	Cucurbita pepo (Zucchini)	carcpeB0884
Carg14813	CsGy3G009340	Cucumber (Gy14) v2	carcgybB0617
Carg14813	MELO3C006157.2	Melon (DHL92) v3.6.1	carmedB0629
Carg14813	CsaV3_3G009380	Cucumber (Chinese Long) v3	carcucB0652
Carg14813	Cla97C05G082410	Watermelon (97103) v2	carwmbB0647
Carg14813	Bhi01G000220	Wax gourd	carwgoB0739

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg14813	Silver-seed gourd	carcarB261
Carg14813	Silver-seed gourd	carcarB474
Carg14813	Cucumber (Gy14) v2	carcgybB0618
Carg14813	Cucumber (Gy14) v2	carcgybB0619
Carg14813	Cucumber (Gy14) v1	carcgyB0694
Carg14813	Cucumber (Gy14) v1	carcgyB0695
Carg14813	Cucurbita maxima (Rimu)	carcmaB0875
Carg14813	Cucurbita maxima (Rimu)	carcmaB0876
Carg14813	Cucurbita maxima (Rimu)	carcmaB0877
Carg14813	Cucurbita maxima (Rimu)	carcmaB0879
Carg14813	Cucurbita moschata (Rifu)	carcmoB0851
Carg14813	Cucurbita moschata (Rifu)	carcmoB0852
Carg14813	Cucurbita moschata (Rifu)	carcmoB0853
Carg14813	Cucurbita pepo (Zucchini)	carcpeB0883
Carg14813	Cucurbita pepo (Zucchini)	carcpeB0885
Carg14813	Wild cucumber (PI 183967)	carcpiB0652
Carg14813	Wild cucumber (PI 183967)	carcpiB0653
Carg14813	Cucumber (Chinese Long) v2	carcuB0645
Carg14813	Cucumber (Chinese Long) v3	carcucB0653
Carg14813	Cucumber (Chinese Long) v3	carcucB0654
Carg14813	Bottle gourd (USVL1VR-Ls)	carlsiB564
Carg14813	Melon (DHL92) v3.5.1	carmeB0620
Carg14813	Melon (DHL92) v3.5.1	carmeB0621
Carg14813	Melon (DHL92) v3.6.1	carmedB0627
Carg14813	Melon (DHL92) v3.6.1	carmedB0628
Carg14813	Watermelon (Charleston Gray)	carwcgB0603
Carg14813	Watermelon (97103) v1	carwmB0618
Carg14813	Watermelon (97103) v1	carwmB0619
Carg14813	Watermelon (97103) v2	carwmbB0645
Carg14813	Watermelon (97103) v2	carwmbB0648