Csa3G045140 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa3G045140
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	AT5g16250/T21H19_170
Location	Chr3 : 3177297 .. 3178179 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTACCAATTCTCCAAACAAACTCGATCAAATATCTCCTCCATTCTTCAAAGATTCAAATTCCACAACAGAACAACCAAGATGGGTTTCTCCATAACCTCAACCCCGTCAACCTCAATGACCCGATCCCATTACCACACTCACAAGCTCTTCCTCTACACAAACTACATCCTTCTCGGCGCTGCCTCAAGCTGCATTTTCCTTACTCTCTCCCTCCGTCTCCTCCCTTCTCTCTGCGGCCTCTCTCTCATCTTCCTCCACATCCTCACCATCGCTGCTGCCGTCTCCGGCTGCGCCATGGCTGCTGCTTCCTCCACTCGATGGTTCGGTGTCCACATGGTGTTCACAGTTTTGACAGCAATATTCCAAGGATCGGTAGCGATGCTTGTGTACACAAGAACAGGGGATTTTCTGTCGGAGTTGAAATCTTATGTTAGAGAAGAAGATGGGGCTGTGATTTTGAAATTGGCTGGTGGATTGAGTGTGGTTATGTTTGTACTGGAATGGGTTGTTCTTACTTTGGCATTCTTTTTGAGGTATTATGCCTTTGTGGAAGAAGGGAGTAACAACAATGGTGCGGCTATGAGAAGTGCTAAAGTTCAACAAGATGAGGATTTGAAAGATTGGCCATGGCCTTTCCAAGTTTAATTAATGTAATTTTTTTTCTTTTAGTGTAATTGGTTGATTTGATTTGTTATTCTTTGTTGGGAACTATATGATATTGTGTATTTTTGTGTTGGTTTATTGTAGTAGTGGGGTTTGAGAGAAAATGTGGAAATTTCTTAAGTGAAATGTTGGTGAATTAATCTAATATTATTGATGATGATGATGCTCTGTTCTTTTAGTTTTTATGAAGATGTGATACTCTGTTCTTGGTGGGGAA

mRNA sequence

ATGGGTTTCTCCATAACCTCAACCCCGTCAACCTCAATGACCCGATCCCATTACCACACTCACAAGCTCTTCCTCTACACAAACTACATCCTTCTCGGCGCTGCCTCAAGCTGCATTTTCCTTACTCTCTCCCTCCGTCTCCTCCCTTCTCTCTGCGGCCTCTCTCTCATCTTCCTCCACATCCTCACCATCGCTGCTGCCGTCTCCGGCTGCGCCATGGCTGCTGCTTCCTCCACTCGATGGTTCGGTGTCCACATGGTGTTCACAGTTTTGACAGCAATATTCCAAGGATCGGTAGCGATGCTTGTGTACACAAGAACAGGGGATTTTCTGTCGGAGTTGAAATCTTATGTTAGAGAAGAAGATGGGGCTGTGATTTTGAAATTGGCTGGTGGATTGAGTGTGGTTATGTTTGTACTGGAATGGGTTGTTCTTACTTTGGCATTCTTTTTGAGGTATTATGCCTTTGTGGAAGAAGGGAGTAACAACAATGGTGCGGCTATGAGAAGTGCTAAAGTTCAACAAGATGAGGATTTGAAAGATTGGCCATGGCCTTTCCAAGTTTAA

Coding sequence (CDS)

ATGGGTTTCTCCATAACCTCAACCCCGTCAACCTCAATGACCCGATCCCATTACCACACTCACAAGCTCTTCCTCTACACAAACTACATCCTTCTCGGCGCTGCCTCAAGCTGCATTTTCCTTACTCTCTCCCTCCGTCTCCTCCCTTCTCTCTGCGGCCTCTCTCTCATCTTCCTCCACATCCTCACCATCGCTGCTGCCGTCTCCGGCTGCGCCATGGCTGCTGCTTCCTCCACTCGATGGTTCGGTGTCCACATGGTGTTCACAGTTTTGACAGCAATATTCCAAGGATCGGTAGCGATGCTTGTGTACACAAGAACAGGGGATTTTCTGTCGGAGTTGAAATCTTATGTTAGAGAAGAAGATGGGGCTGTGATTTTGAAATTGGCTGGTGGATTGAGTGTGGTTATGTTTGTACTGGAATGGGTTGTTCTTACTTTGGCATTCTTTTTGAGGTATTATGCCTTTGTGGAAGAAGGGAGTAACAACAATGGTGCGGCTATGAGAAGTGCTAAAGTTCAACAAGATGAGGATTTGAAAGATTGGCCATGGCCTTTCCAAGTTTAA

Protein sequence

MGFSITSTPSTSMTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEEGSNNNGAAMRSAKVQQDEDLKDWPWPFQV*

Homology

[Close]

BLAST of Csa3G045140 vs. TrEMBL
Match: A0A0A0L253_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G045140 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 8.2e-101
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 1


Query: 1   MGFSITSTPSTSMTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLH 60
           MGFSITSTPSTSMTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLH
Sbjct: 1   MGFSITSTPSTSMTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLH 60

Query: 61  ILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYVRE 120
           ILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYVRE
Sbjct: 61  ILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYVRE 120

Query: 121 EDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEEGSNNNGAAMRSAKVQQDEDLK 180
           EDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEEGSNNNGAAMRSAKVQQDEDLK
Sbjct: 121 EDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEEGSNNNGAAMRSAKVQQDEDLK 180

Query: 181 DWPWPFQV 189
           DWPWPFQV
Sbjct: 181 DWPWPFQV 188

[Close]

BLAST of Csa3G045140 vs. TrEMBL
Match: B9HYG6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s18640g PE=4 SV=2)

HSP 1 Score: 282.0 bits (720), Expect = 5.5e-73
Identity = 139/191 (72.77%), Postives = 163/191 (85.34%), Query Frame = 1


Query: 1   MGFSIT-STPSTSMTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFL 60
           MG SIT  + ++S+++SHYHTH++FL+ NYILLGAASSCIFLTLSLRL+PS+CG  LI L
Sbjct: 98  MGASITLGSTNSSVSQSHYHTHRVFLFCNYILLGAASSCIFLTLSLRLVPSICGFFLILL 157

Query: 61  HILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYVR 120
           H+ TIA AVSGCA A++ + RW+  HMV TVLTAIFQGSV++L++TRTGDFL  LKSYVR
Sbjct: 158 HVFTIAGAVSGCAAASSGTNRWYAAHMVATVLTAIFQGSVSVLIFTRTGDFLGNLKSYVR 217

Query: 121 EEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEEGSNNNG--AAMRSAKVQQDE 180
           EEDG VILKLAGGL VV+F LEWVVLTLAFFL+YYA+VE  +NN G  A  RSAKVQQDE
Sbjct: 218 EEDGDVILKLAGGLCVVIFCLEWVVLTLAFFLKYYAYVEGDANNGGDIAMRRSAKVQQDE 277

Query: 181 DLKDWPWPFQV 189
           DLKDWPWPFQV
Sbjct: 278 DLKDWPWPFQV 288

[Close]

BLAST of Csa3G045140 vs. TrEMBL
Match: A0A061EUW3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_023382 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 2.1e-72
Identity = 136/189 (71.96%), Postives = 156/189 (82.54%), Query Frame = 1


Query: 1   MGFSITSTPSTSMTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLH 60
           MG  + + P T++TRSHYHTHK FL+ NYILLGAASSCIFLTLSLRL PSL G  LI LH
Sbjct: 1   MGIHLNTIPQTTITRSHYHTHKFFLFCNYILLGAASSCIFLTLSLRLFPSLFGFFLILLH 60

Query: 61  ILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYVRE 120
           +LTIA AVSGC  A++ + RW+  HMV TVLTAIFQGSV++L++TRT DFL  LKSYVRE
Sbjct: 61  VLTIAGAVSGCTAASSGTNRWYAAHMVATVLTAIFQGSVSVLIFTRTSDFLGNLKSYVRE 120

Query: 121 EDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEEGSNNNGAAMR-SAKVQQDEDL 180
           +DGAVILKLAGGL  ++F LEWVVLTLAFFL+YYA+VE   N N  AM+ SAKVQQDEDL
Sbjct: 121 DDGAVILKLAGGLCALIFCLEWVVLTLAFFLKYYAYVEGDVNGNSTAMKMSAKVQQDEDL 180

Query: 181 KDWPWPFQV 189
           KDWPWPFQV
Sbjct: 181 KDWPWPFQV 189

[Close]

BLAST of Csa3G045140 vs. TrEMBL
Match: D7ST03_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0499g00020 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 6.1e-72
Identity = 138/190 (72.63%), Postives = 165/190 (86.84%), Query Frame = 1


Query: 1   MGFSITSTPSTSMTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLH 60
           MG SI +  S+S+T SHYHTHK+FL+ NYILLGAASSCIFLTLSLRLLPS+CG  LI LH
Sbjct: 1   MGLSIHNQ-SSSVTESHYHTHKVFLFCNYILLGAASSCIFLTLSLRLLPSVCGFFLILLH 60

Query: 61  ILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYVRE 120
           ILTI  AVSGCA A+  ++RW+  HMV TVLTAIFQGSV++L++TRT DFL +LKSYVRE
Sbjct: 61  ILTITGAVSGCAAASTGTSRWYAAHMVTTVLTAIFQGSVSVLIFTRTSDFLGDLKSYVRE 120

Query: 121 EDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVE-EGSNNNGAAM-RSAKVQQDED 180
           EDGAVILKLAGGLS+++F LEWVV+ LAFFL+YYA+VE +G  ++G+AM +SAKVQQ+ED
Sbjct: 121 EDGAVILKLAGGLSILIFCLEWVVMILAFFLKYYAYVEGDGCGSSGSAMKKSAKVQQEED 180

Query: 181 LKDWPWPFQV 189
           LKDWPWPFQV
Sbjct: 181 LKDWPWPFQV 189

[Close]

BLAST of Csa3G045140 vs. TrEMBL
Match: V4TB47_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002603mg PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.4e-71
Identity = 138/188 (73.40%), Postives = 157/188 (83.51%), Query Frame = 1


Query: 1   MGFSITSTPSTSMTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLH 60
           MG S+    S S+  SH+HTHK+FLY NYILLGAASSCIFLTLSLRLLPS+CG   I LH
Sbjct: 1   MGISLNPN-SQSLNGSHHHTHKVFLYCNYILLGAASSCIFLTLSLRLLPSVCGFFFILLH 60

Query: 61  ILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYVRE 120
           ILTIA A+SGCA A++ S+RW+G HMV TVLTAIFQGSV++LV+TRT DFL +LKSYVRE
Sbjct: 61  ILTIAGAISGCAAASSDSSRWYGAHMVATVLTAIFQGSVSVLVFTRTSDFLGKLKSYVRE 120

Query: 121 EDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEEGSNNNGAAMRSAKVQQDEDLK 180
           EDG VILKLAGGL V++F LEWVVLTLAFFL+YYA+V EG N   A  RSAKV Q+EDLK
Sbjct: 121 EDGVVILKLAGGLCVLIFCLEWVVLTLAFFLKYYAYV-EGGNGTPAVRRSAKVSQEEDLK 180

Query: 181 DWPWPFQV 189
           DWPWPFQV
Sbjct: 181 DWPWPFQV 186

[Close]

BLAST of Csa3G045140 vs. TAIR10
Match: AT5G16250.1 (AT5G16250.1 unknown protein)

HSP 1 Score: 250.0 bits (637), Expect = 1.2e-66
Identity = 124/189 (65.61%), Postives = 148/189 (78.31%), Query Frame = 1


Query: 1   MGFSITSTPSTSMTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLH 60
           MGF  +S+P   +  SHYHTHK+FL++NYILLGAASSCIFLTLSLRL+PS+CG  LI LH
Sbjct: 1   MGFISSSSP---VEESHYHTHKIFLFSNYILLGAASSCIFLTLSLRLIPSICGFLLILLH 60

Query: 61  ILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYVRE 120
             TIAAAVSGCA A+    RW+  HMV TVLTAIFQGSV++L++T T  FL  LKSYVRE
Sbjct: 61  ATTIAAAVSGCAAASCGRNRWYAAHMVATVLTAIFQGSVSVLIFTNTSKFLGSLKSYVRE 120

Query: 121 EDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEEGSNNNGAAM-RSAKVQQDEDL 180
           ED AVILKL GGL +V+F L+W+VL  AFFL+YYA+V+ G   +G AM R+ KVQ +E+ 
Sbjct: 121 EDAAVILKLGGGLCIVIFCLDWIVLVCAFFLKYYAYVDGG---DGVAMKRTGKVQSEENP 180

Query: 181 KDWPWPFQV 189
           KDWPWPFQV
Sbjct: 181 KDWPWPFQV 183

[Close]

BLAST of Csa3G045140 vs. TAIR10
Match: AT3G02640.1 (AT3G02640.1 unknown protein)

HSP 1 Score: 238.0 bits (606), Expect = 4.6e-63
Identity = 116/180 (64.44%), Postives = 140/180 (77.78%), Query Frame = 1


Query: 9   PSTSMTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAV 68
           P  S+  SHY+THKLFL  NY+LLGA+SSCIFLTLSLRL+PSLCG  LI LH  TIAAAV
Sbjct: 7   PQESIQESHYYTHKLFLTANYVLLGASSSCIFLTLSLRLIPSLCGFFLILLHATTIAAAV 66

Query: 69  SGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYVREEDGAVILK 128
           SGCA A+    RW+  HM+ TVLTAIFQGSV++L++T T +FL  L SYVRE++ ++ILK
Sbjct: 67  SGCAAASYGKNRWYAAHMIATVLTAIFQGSVSVLIFTNTSNFLESLNSYVREKEASMILK 126

Query: 129 LAGGLSVVMFVLEWVVLTLAFFLRYYAFVEEGSNNNGAAMRSAKVQQDEDLKDWPWPFQV 188
           LAGGL VV+F LEW+VL LAFFL+YYA+V +G NN  A  R+ KVQ +E LK+ PW FQV
Sbjct: 127 LAGGLCVVIFCLEWIVLVLAFFLKYYAYV-DGDNNGVAMKRTGKVQSEETLKNSPWAFQV 185

[Close]

BLAST of Csa3G045140 vs. TAIR10
Match: AT5G36800.1 (AT5G36800.1 unknown protein)

HSP 1 Score: 209.5 bits (532), Expect = 1.8e-54
Identity = 114/183 (62.30%), Postives = 141/183 (77.05%), Query Frame = 1


Query: 13  MTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCA 72
           M++S  +TH +FL  NYILLG+ASSCIFLT+SLRL PSL GLSLIFL+ LTIA AVSGC+
Sbjct: 3   MSKSKGNTHNIFLLCNYILLGSASSCIFLTISLRLFPSLSGLSLIFLYTLTIATAVSGCS 62

Query: 73  MAAAS-----STRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYVREEDGAVIL 132
           + A+S     S R +G HMV TVLTAIFQG+V++L++TRTGDFL  LKSYVREEDG VIL
Sbjct: 63  IFASSTSATASDRLYGSHMVATVLTAIFQGAVSVLIFTRTGDFLRFLKSYVREEDGEVIL 122

Query: 133 KLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEEGSNNNGAAMRSAKV-QQDEDLKDWP-WP 189
           KL+GGL V+MF LEW+VL LAF L+Y  +++E   ++       KV +Q+EDLKDWP +P
Sbjct: 123 KLSGGLCVLMFCLEWIVLVLAFLLKYSDYLDESVVDDD----DFKVRRQEEDLKDWPSYP 181

[Close]

BLAST of Csa3G045140 vs. TAIR10
Match: AT5G36710.1 (AT5G36710.1 unknown protein)

HSP 1 Score: 209.5 bits (532), Expect = 1.8e-54
Identity = 114/183 (62.30%), Postives = 141/183 (77.05%), Query Frame = 1


Query: 13  MTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCA 72
           M++S  +TH +FL  NYILLG+ASSCIFLT+SLRL PSL GLSLIFL+ LTIA AVSGC+
Sbjct: 3   MSKSKGNTHNIFLLCNYILLGSASSCIFLTISLRLFPSLSGLSLIFLYTLTIATAVSGCS 62

Query: 73  MAAAS-----STRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYVREEDGAVIL 132
           + A+S     S R +G HMV TVLTAIFQG+V++L++TRTGDFL  LKSYVREEDG VIL
Sbjct: 63  IFASSTSATASDRLYGSHMVATVLTAIFQGAVSVLIFTRTGDFLRFLKSYVREEDGEVIL 122

Query: 133 KLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEEGSNNNGAAMRSAKV-QQDEDLKDWP-WP 189
           KL+GGL V+MF LEW+VL LAF L+Y  +++E   ++       KV +Q+EDLKDWP +P
Sbjct: 123 KLSGGLCVLMFCLEWIVLVLAFLLKYSDYLDESVVDDD----DFKVRRQEEDLKDWPSYP 181

[Close]

BLAST of Csa3G045140 vs. NCBI nr
Match: gi|449461074|ref|XP_004148268.1| (PREDICTED: uncharacterized protein LOC101206234 [Cucumis sativus])

HSP 1 Score: 374.4 bits (960), Expect = 1.2e-100
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 1


Query: 1   MGFSITSTPSTSMTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLH 60
           MGFSITSTPSTSMTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLH
Sbjct: 1   MGFSITSTPSTSMTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLH 60

Query: 61  ILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYVRE 120
           ILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYVRE
Sbjct: 61  ILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYVRE 120

Query: 121 EDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEEGSNNNGAAMRSAKVQQDEDLK 180
           EDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEEGSNNNGAAMRSAKVQQDEDLK
Sbjct: 121 EDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEEGSNNNGAAMRSAKVQQDEDLK 180

Query: 181 DWPWPFQV 189
           DWPWPFQV
Sbjct: 181 DWPWPFQV 188

[Close]

BLAST of Csa3G045140 vs. NCBI nr
Match: gi|659096260|ref|XP_008449000.1| (PREDICTED: uncharacterized protein LOC103491004 [Cucumis melo])

HSP 1 Score: 366.3 bits (939), Expect = 3.2e-98
Identity = 186/189 (98.41%), Postives = 187/189 (98.94%), Query Frame = 1


Query: 1   MGFSITSTPSTSMTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLH 60
           MGFSITSTPSTSMTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLH
Sbjct: 1   MGFSITSTPSTSMTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLH 60

Query: 61  ILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYVRE 120
           ILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFL ELKSYVRE
Sbjct: 61  ILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLLELKSYVRE 120

Query: 121 EDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVE-EGSNNNGAAMRSAKVQQDEDL 180
           EDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVE +GSNNNGAAMRSAKVQQDEDL
Sbjct: 121 EDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEGDGSNNNGAAMRSAKVQQDEDL 180

Query: 181 KDWPWPFQV 189
           KDWPWPFQV
Sbjct: 181 KDWPWPFQV 189

[Close]

BLAST of Csa3G045140 vs. NCBI nr
Match: gi|566191522|ref|XP_002315113.2| (hypothetical protein POPTR_0010s18640g [Populus trichocarpa])

HSP 1 Score: 282.0 bits (720), Expect = 7.9e-73
Identity = 139/191 (72.77%), Postives = 163/191 (85.34%), Query Frame = 1


Query: 1   MGFSIT-STPSTSMTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFL 60
           MG SIT  + ++S+++SHYHTH++FL+ NYILLGAASSCIFLTLSLRL+PS+CG  LI L
Sbjct: 98  MGASITLGSTNSSVSQSHYHTHRVFLFCNYILLGAASSCIFLTLSLRLVPSICGFFLILL 157

Query: 61  HILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYVR 120
           H+ TIA AVSGCA A++ + RW+  HMV TVLTAIFQGSV++L++TRTGDFL  LKSYVR
Sbjct: 158 HVFTIAGAVSGCAAASSGTNRWYAAHMVATVLTAIFQGSVSVLIFTRTGDFLGNLKSYVR 217

Query: 121 EEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEEGSNNNG--AAMRSAKVQQDE 180
           EEDG VILKLAGGL VV+F LEWVVLTLAFFL+YYA+VE  +NN G  A  RSAKVQQDE
Sbjct: 218 EEDGDVILKLAGGLCVVIFCLEWVVLTLAFFLKYYAYVEGDANNGGDIAMRRSAKVQQDE 277

Query: 181 DLKDWPWPFQV 189
           DLKDWPWPFQV
Sbjct: 278 DLKDWPWPFQV 288

[Close]

BLAST of Csa3G045140 vs. NCBI nr
Match: gi|743801505|ref|XP_011014818.1| (PREDICTED: uncharacterized protein LOC105118535 [Populus euphratica])

HSP 1 Score: 280.8 bits (717), Expect = 1.8e-72
Identity = 138/191 (72.25%), Postives = 163/191 (85.34%), Query Frame = 1


Query: 1   MGFSIT-STPSTSMTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFL 60
           MG SIT  + ++S+++SHYHTH++FL+ NYILLGAASSCIFLTLSLRL+PS+CG  LI L
Sbjct: 1   MGASITLGSTNSSVSQSHYHTHRVFLFCNYILLGAASSCIFLTLSLRLVPSICGFFLILL 60

Query: 61  HILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYVR 120
           H+ TIA AVSGCA A++ + RW+  HMV TVLTAIFQGSV++L++TR+GDFL  LKSYVR
Sbjct: 61  HVFTIAGAVSGCAAASSGTNRWYAAHMVATVLTAIFQGSVSVLIFTRSGDFLGNLKSYVR 120

Query: 121 EEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEEGSNNNG--AAMRSAKVQQDE 180
           EEDG VILKLAGGL VV+F LEWVVLTLAFFL+YYA+VE  +NN G  A  RSAKVQQDE
Sbjct: 121 EEDGEVILKLAGGLCVVIFCLEWVVLTLAFFLKYYAYVEGDANNGGDIAMRRSAKVQQDE 180

Query: 181 DLKDWPWPFQV 189
           DLKDWPWPFQV
Sbjct: 181 DLKDWPWPFQV 191

[Close]

BLAST of Csa3G045140 vs. NCBI nr
Match: gi|1009114291|ref|XP_015873605.1| (PREDICTED: uncharacterized protein LOC107410666 [Ziziphus jujuba])

HSP 1 Score: 280.0 bits (715), Expect = 3.0e-72
Identity = 137/192 (71.35%), Postives = 159/192 (82.81%), Query Frame = 1


Query: 1   MGFSITSTPSTSMTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLH 60
           MGFS+ + P +S+  SHYHTHK+FL+ NYILLGAASSCIFLTLSLRL PS+CG  LI LH
Sbjct: 1   MGFSVQTNPPSSIGDSHYHTHKVFLFCNYILLGAASSCIFLTLSLRLFPSICGFFLILLH 60

Query: 61  ILTIAAAVSGCAMAAASST-RWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYVR 120
           + TI  AVSGCA A+A  T RW+G HMV TVLTAIFQGSV++L++TRT DFL  LKSYVR
Sbjct: 61  VFTIVGAVSGCAAASAGMTGRWYGAHMVATVLTAIFQGSVSVLIFTRTADFLGNLKSYVR 120

Query: 121 EEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEEGS---NNNGAAMRSAKVQQD 180
           EEDGAVILKLAGGL +++F LEWVVLTLAFFL+YYA+VE G    ++N    RSAKVQQD
Sbjct: 121 EEDGAVILKLAGGLCILIFCLEWVVLTLAFFLKYYAYVEGGDGRVSSNAIVRRSAKVQQD 180

Query: 181 EDLKDWPWPFQV 189
           +DLKDWPWPFQV
Sbjct: 181 DDLKDWPWPFQV 192

The following BLAST results are available for this feature:

BLAST of Csa3G045140 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L253_CUCSA	8.2e-101	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G045140 PE=4 SV=1	[more]
B9HYG6_POPTR	5.5e-73	72.77	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s18640g PE=4 SV=2	[more]
A0A061EUW3_THECC	2.1e-72	71.96	Uncharacterized protein OS=Theobroma cacao GN=TCM_023382 PE=4 SV=1	[more]
D7ST03_VITVI	6.1e-72	72.63	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0499g00020 PE=4 SV=...	[more]
V4TB47_9ROSI	1.4e-71	73.40	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002603mg PE=4 SV=1	[more]

BLAST of Csa3G045140 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16250.1	1.2e-66	65.61	unknown protein	[more]
AT3G02640.1	4.6e-63	64.44	unknown protein	[more]
AT5G36800.1	1.8e-54	62.30	unknown protein	[more]
AT5G36710.1	1.8e-54	62.30	unknown protein	[more]

BLAST of Csa3G045140 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449461074\|ref\|XP_004148268.1\|	1.2e-100	100.00	PREDICTED: uncharacterized protein LOC101206234 [Cucumis sativus]	[more]
gi\|659096260\|ref\|XP_008449000.1\|	3.2e-98	98.41	PREDICTED: uncharacterized protein LOC103491004 [Cucumis melo]	[more]
gi\|566191522\|ref\|XP_002315113.2\|	7.9e-73	72.77	hypothetical protein POPTR_0010s18640g [Populus trichocarpa]	[more]
gi\|743801505\|ref\|XP_011014818.1\|	1.8e-72	72.25	PREDICTED: uncharacterized protein LOC105118535 [Populus euphratica]	[more]
gi\|1009114291\|ref\|XP_015873605.1\|	3.0e-72	71.35	PREDICTED: uncharacterized protein LOC107410666 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003723	RNA binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU097124	cucumber EST collection version 3.0	transcribed_cluster
CU107483	cucumber EST collection version 3.0	transcribed_cluster
CU132045	cucumber EST collection version 3.0	transcribed_cluster
CU152643	cucumber EST collection version 3.0	transcribed_cluster
CU160196	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa3G045140.1	Csa3G045140.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU132045	CU132045	transcribed_cluster
CU097124	CU097124	transcribed_cluster
CU107483	CU107483	transcribed_cluster
CU160196	CU160196	transcribed_cluster
CU152643	CU152643	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34124	FAMILY NOT NAMED	coord: 4..188 score: 6.2E
None	No IPR available	PANTHER	PTHR34124:SF2	F16B3.27 PROTEIN	coord: 4..188 score: 6.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa3G045140	Cla004442	Watermelon (97103) v1	cuwmB201
Csa3G045140	MELO3C014080	Melon (DHL92) v3.5.1	cumeB243
Csa3G045140	ClCG10G004090	Watermelon (Charleston Gray)	cuwcgB189
Csa3G045140	MELO3C014080.2	Melon (DHL92) v3.6.1	cumedB224
Csa3G045140	Cla97C10G188560	Watermelon (97103) v2	cuwmbB181
Csa3G045140	Bhi11G000340	Wax gourd	cuwgoB218
Csa3G045140	CSPI03G03910	Wild cucumber (PI 183967)	cpicuB120
Csa3G045140	Cucsa.041820	Cucumber (Gy14) v1	cgycuB014
Csa3G045140	CmoCh06G007060	Cucurbita moschata (Rifu)	cmocuB815
Csa3G045140	Cp4.1LG08g08260	Cucurbita pepo (Zucchini)	cpecuB850
Csa3G045140	CsGy3G003910	Cucumber (Gy14) v2	cgybcuB109
Csa3G045140	Carg23535	Silver-seed gourd	carcuB0008

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa3G045140	Cucumber (Chinese Long) v2	cucuB126
Csa3G045140	Cucumber (Gy14) v1	cgycuB154
Csa3G045140	Cucurbita maxima (Rimu)	cmacuB327
Csa3G045140	Cucurbita maxima (Rimu)	cmacuB825
Csa3G045140	Cucurbita moschata (Rifu)	cmocuB315
Csa3G045140	Watermelon (Charleston Gray)	cuwcgB192
Csa3G045140	Cucurbita pepo (Zucchini)	cpecuB213
Csa3G045140	Bottle gourd (USVL1VR-Ls)	culsiB160
Csa3G045140	Bottle gourd (USVL1VR-Ls)	culsiB228