Cp4.1LG08g08260 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG08g08260
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRNA-binding protein pno1
LocationCp4.1LG08 : 6549615 .. 6552601 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGTTGGGCAAGATCCCGCCCCTATATATCTTCCTCTTCATTCCACACCTTCTTTCAACATCCGCCATTACCAATCCTTCTTCCTGCAAAAGCTCAAAGAATTTCATCAATTCTTTCTCAAATTTAATTCATCAAATTCTCCATCTCCGATTAAAAATGGGTTTCTCCATAAGCGGCCACCCACAATCATCAACCTCAATGAGCCGTTCCCATTACCACACCCACAAGCTCTTCCTCTACACCAATTACATCCTCCTCGGCGCCGCCTCCAGCTGCATTTTCCTCACTCTTTCCCTCCGCCTCCTCCCCTCTCTCTGCGGTCTCTCCCTCATCTTCCTCCACATCCTCACCATCGCCGCCGCCGTCTCCGGCTGCGCCATGGCCTCCACCGCCTCGGGTCGTTGGTTCGGCATCCACATGGTGTTCACCGTCCTCACCGCCATCTTCCAAGGCTCTGTTGCTGTCCTGGTGTACACCAGAACAGGGGACTTTCTTGGGGAGTTGAAATCGTACGTGAGGGAGGAGGATGGAGCCGTGATCTTGAAATTGGCCGGAGGGTTGAGTGTGGTTATGTTTGTTTTGGAGTGGGTTGTTCTTACTTTGGCGTTTTTCTTGAAGTATTATGCGTTTGTTGAAGGCGGTGGAGGGAGTGGGAATGGGGCGGCGGCGATGAGGAGTGCTAAGGTTGAACAGGATGAGGATTTGAAGGACTGGCCTTGGCCGTTCCAAGTTTGATTGATTCCACTTTGTTTGGATTTTATATATTTTTTGTGAAATATGTTCAATTTGTTTCTTAAAATTTAGATATGTAATCTTCAATTTATTGTTTAATTCCTTTCGGGTGTGAATCGTGTCTCTCTTTTAAAACAAAAAACATATTTTAAAGGGGTTTGGGTGAAAGTCAAGGTAATCTTATTGGCATGAAATACACAAGCCTGAAACCCCGATTTGGTGAGGTTTTTGGTATCTCAGTGCAATACTCGAGTATAATTTGGTAAGATTTTAGCAATTTTATGTCTAGTTTAGTTTTTTGTGGATGAGTCACCCATATTGTCCACTTTGAGCCTAATCTCTCTCAAGCCTATGCTGTTTTGGGTTTTTCAGAAGGCCTCATCCAATGGAGATACTATTTCTCACTTGTAAACGTGATATTTCACTAAATTATAACCAACGTTGAACTCACTCCCAATAATCCATAACAATTGTCACTCCAAATTAGTGTACTTTTTCACCTAATCAATTCTTTCGAAGTCTTTCCTTGTCCGAAAATCTTCTCTCTCCTATTCCACTCGGTCGAGTGATCCCAGACCAATTCAGTCACATTTCATTCATTTGGAATATGGGCTTTTATTAATTCAATTAGAGAATCGGAGGTCGAGTCCAAATTTTGGTGGAGTGAAATATTTGATTCTTTTTCTAATCTTCCCAGCTCTTCTTCTATACATTATTTTTTAAAAAAAAAAATTGTTTATTTATTATTTTTTTATTCCATTCGGGTAAGAGAGAAGCTTATTTAAACAACAAATCTTTTAAAGTCTATTAAAAAATATATTTTTTAGTGAAAAAATAGACACAAAAATAAAATAAAAATAATGGGCCCCAACGGCCCAATGGCCCAATGGCCCAATCCCATTTGATTTTAATTTAAGAAACAAAGATGAAAACAAAATAGAGCGAAGAAAGGATCGTTAAACCCTAAGAGCCGACTCATTTCTTCGCACTTTCTCCTCTTCCTCTTAGCAGTTAACTTAGCACCTTCCCGCCGTCTCCTCCGTCGTTCTCTGTGCCACCGTCGACGCCGTACCCCTTCTTCACATATTTGTCTACCTTTCTTGATCTCAGGTATTCTCCCTATTTACCCCCTATCTTTCTCTTTCAAGTTTCATTCCGTTGCAGTGGATGACATCCCAATGGGAACTGATTTGAATTTCTGTTTTGCCGAAGTTTCATTGGTTTGGTTGCTCATTCGTACGATCCGAGGCCGACGCATTCTATTCTCGTGTTACCTAAAATTGATATTGGATTATAGTATTTTAGAATCCGGCACTGTTTGTAGTTGAATCCTACTTGCTTGTTATTAGTTAATTGTTATATTGGGTTGTAGTGTTAGAATCAATGCATCTTTTACATGAGAAAAGGAATTTTTGTTTCTGCAATTTCTCTTCTCGGGAGGGTAAGAATGAAGTTTATCAGATTTATTTTCAATTTTTGTTGCTTATCATGTTGATTGATGGGGTTTTGTTTATATTTGATCTATTACTTCGTCGTTTAACACTAGTTCATTGGCTGTTTACAGTGTGGAGACTCAGAACCATTTCATAATGCAGTCAACCGAAGCCTCCACTTCCATGGAAGTAGAAGCAGTTTCAACTCAACCGAAACCAGTAGTTAGCACATTACCCCCAAAACCTCACTTTGATCCTCTAAAGCCCCATGAGATGAATGATGGTCGAGTTCAGTTCCGAAAGGTCTCTGTTCCTCCGCATCGATATTCTCCGCTCAAGAAAGCATGGATGGAGATTTACACCCCAATTTATGAGCAGATGAAAATTGACCTCCGAATGAATCTCAAGGCACGAAAAGTCGAACTTAAAACCAGAGCAGACACGCCTGATATCAGTAACTTACAGAAATGTGCAGATTTTGTCCATGCTTTCATGCTCGGTTTTGATGTGATCGATGCCATTGCACTCCTACGGGTGGATGAACTCTATGTGGAGTCTTTTGAGATTAAAGATGTTAAGACGCTTCGAGGCGAGCACTTGTCTCGTGCCATAGGCAGATTGTCTGGTAAAGCTGGTAAGACAAAGTTTGCCATCGAAAACGCCACAAAGACGAGGATAGTTATTGCAGACACCAAGATTCACATATTAGGATCCTTCGCAAATATCAAGATTGCAAGGGATTCTCTTTGCAGCCTCATTTTAGGGTCCCCTGCTGGAAAAGTTTATTCAAAACTGAGAGCAGTCACAGCCAGATTGGCTGAA

mRNA sequence

CCGTTGGGCAAGATCCCGCCCCTATATATCTTCCTCTTCATTCCACACCTTCTTTCAACATCCGCCATTACCAATCCTTCTTCCTGCAAAAGCTCAAAGAATTTCATCAATTCTTTCTCAAATTTAATTCATCAAATTCTCCATCTCCGATTAAAAATGGGTTTCTCCATAAGCGGCCACCCACAATCATCAACCTCAATGAGCCGTTCCCATTACCACACCCACAAGCTCTTCCTCTACACCAATTACATCCTCCTCGGCGCCGCCTCCAGCTGCATTTTCCTCACTCTTTCCCTCCGCCTCCTCCCCTCTCTCTGCGGTCTCTCCCTCATCTTCCTCCACATCCTCACCATCGCCGCCGCCGTCTCCGGCTGCGCCATGGCCTCCACCGCCTCGGGTCGTTGGTTCGGCATCCACATGGTGTTCACCGTCCTCACCGCCATCTTCCAAGGCTCTGTTGCTGTCCTGGTGTACACCAGAACAGGGGACTTTCTTGGGGAGTTGAAATCGTACGTGAGGGAGGAGGATGGAGCCGTGATCTTGAAATTGGCCGGAGGGTTGAGTGTGGTTATGTTTGTTTTGGAGTGGGTTGTTCTTACTTTGGCGTTTTTCTTGAAGTATTATGCGTTTGTTGAAGGCGGTGGAGGGAGTGGGAATGGGGCGGCGGCGATGAGGAGTGCTAAGGTTGAACAGGATGAGGATTTGAAGGACTGGCCTTGGCCGTTCCAAACTCAGAACCATTTCATAATGCAGTCAACCGAAGCCTCCACTTCCATGGAAGTAGAAGCAGTTTCAACTCAACCGAAACCAGTAGTTAGCACATTACCCCCAAAACCTCACTTTGATCCTCTAAAGCCCCATGAGATGAATGATGGTCGAGTTCAGTTCCGAAAGGTCTCTGTTCCTCCGCATCGATATTCTCCGCTCAAGAAAGCATGGATGGAGATTTACACCCCAATTTATGAGCAGATGAAAATTGACCTCCGAATGAATCTCAAGGCACGAAAAGTCGAACTTAAAACCAGAGCAGACACGCCTGATATCAGTAACTTACAGAAATGTGCAGATTTTGTCCATGCTTTCATGCTCGGTTTTGATGTGATCGATGCCATTGCACTCCTACGGGTGGATGAACTCTATGTGGAGTCTTTTGAGATTAAAGATGTTAAGACGCTTCGAGGCGAGCACTTGTCTCGTGCCATAGGCAGATTGTCTGGTAAAGCTGGTAAGACAAAGTTTGCCATCGAAAACGCCACAAAGACGAGGATAGTTATTGCAGACACCAAGATTCACATATTAGGATCCTTCGCAAATATCAAGATTGCAAGGGATTCTCTTTGCAGCCTCATTTTAGGGTCCCCTGCTGGAAAAGTTTATTCAAAACTGAGAGCAGTCACAGCCAGATTGGCTGAA

Coding sequence (CDS)

CCGTTGGGCAAGATCCCGCCCCTATATATCTTCCTCTTCATTCCACACCTTCTTTCAACATCCGCCATTACCAATCCTTCTTCCTGCAAAAGCTCAAAGAATTTCATCAATTCTTTCTCAAATTTAATTCATCAAATTCTCCATCTCCGATTAAAAATGGGTTTCTCCATAAGCGGCCACCCACAATCATCAACCTCAATGAGCCGTTCCCATTACCACACCCACAAGCTCTTCCTCTACACCAATTACATCCTCCTCGGCGCCGCCTCCAGCTGCATTTTCCTCACTCTTTCCCTCCGCCTCCTCCCCTCTCTCTGCGGTCTCTCCCTCATCTTCCTCCACATCCTCACCATCGCCGCCGCCGTCTCCGGCTGCGCCATGGCCTCCACCGCCTCGGGTCGTTGGTTCGGCATCCACATGGTGTTCACCGTCCTCACCGCCATCTTCCAAGGCTCTGTTGCTGTCCTGGTGTACACCAGAACAGGGGACTTTCTTGGGGAGTTGAAATCGTACGTGAGGGAGGAGGATGGAGCCGTGATCTTGAAATTGGCCGGAGGGTTGAGTGTGGTTATGTTTGTTTTGGAGTGGGTTGTTCTTACTTTGGCGTTTTTCTTGAAGTATTATGCGTTTGTTGAAGGCGGTGGAGGGAGTGGGAATGGGGCGGCGGCGATGAGGAGTGCTAAGGTTGAACAGGATGAGGATTTGAAGGACTGGCCTTGGCCGTTCCAAACTCAGAACCATTTCATAATGCAGTCAACCGAAGCCTCCACTTCCATGGAAGTAGAAGCAGTTTCAACTCAACCGAAACCAGTAGTTAGCACATTACCCCCAAAACCTCACTTTGATCCTCTAAAGCCCCATGAGATGAATGATGGTCGAGTTCAGTTCCGAAAGGTCTCTGTTCCTCCGCATCGATATTCTCCGCTCAAGAAAGCATGGATGGAGATTTACACCCCAATTTATGAGCAGATGAAAATTGACCTCCGAATGAATCTCAAGGCACGAAAAGTCGAACTTAAAACCAGAGCAGACACGCCTGATATCAGTAACTTACAGAAATGTGCAGATTTTGTCCATGCTTTCATGCTCGGTTTTGATGTGATCGATGCCATTGCACTCCTACGGGTGGATGAACTCTATGTGGAGTCTTTTGAGATTAAAGATGTTAAGACGCTTCGAGGCGAGCACTTGTCTCGTGCCATAGGCAGATTGTCTGGTAAAGCTGGTAAGACAAAGTTTGCCATCGAAAACGCCACAAAGACGAGGATAGTTATTGCAGACACCAAGATTCACATATTAGGATCCTTCGCAAATATCAAGATTGCAAGGGATTCTCTTTGCAGCCTCATTTTAGGGTCCCCTGCTGGAAAAGTTTATTCAAAACTGAGAGCAGTCACAGCCAGATTGGCTGAA

Protein sequence

PLGKIPPLYIFLFIPHLLSTSAITNPSSCKSSKNFINSFSNLIHQILHLRLKMGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPFQTQNHFIMQSTEASTSMEVEAVSTQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDLRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAE
Homology
[Close]
BLAST of Cp4.1LG08g08260 vs. Swiss-Prot
Match: PNO1_DROME (RNA-binding protein pno1 OS=Drosophila melanogaster GN=l(1)G0004 PE=2 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 4.0e-65
Identity = 121/186 (65.05%), Postives = 155/186 (83.33%), Query Frame = 1 

Query: 286 PHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDLRMNLKARKVELKTRADT 345
           P +    R + RKVSVPPHRYS LK+ WM+I+TP+ E MK+ +R N+KAR+VEL+   +T
Sbjct: 53  PPKAKRARSELRKVSVPPHRYSSLKEHWMKIFTPVVEHMKLQIRFNMKARQVELRVGPET 112

Query: 346 PDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLS 405
           PDI+NLQ+ ADFV AF+ GF+V DA+ALLR+++L+VESFEIKDVKTLRG+H SRAIGRL+
Sbjct: 113 PDIANLQRGADFVRAFLCGFEVDDALALLRLEDLFVESFEIKDVKTLRGDHQSRAIGRLA 172

Query: 406 GKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAV 465
           GK G+TKF IEN TKTRIV+AD+KIHILGS+ NI++AR ++C+LILGSP  KVY  LRAV
Sbjct: 173 GKGGRTKFTIENVTKTRIVLADSKIHILGSYQNIQLARRAVCNLILGSPPSKVYGNLRAV 232

Query: 466 TARLAE 472
            +RL+E
Sbjct: 233 ASRLSE 238

[Close]
BLAST of Cp4.1LG08g08260 vs. Swiss-Prot
Match: PNO1_DROPS (RNA-binding protein pno1 OS=Drosophila pseudoobscura pseudoobscura GN=l(1)G0004 PE=3 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 5.8e-64
Identity = 118/177 (66.67%), Postives = 152/177 (85.88%), Query Frame = 1 

Query: 295 QFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDLRMNLKARKVELKTRADTPDISNLQKC 354
           + RKVSVPPHRYS LK+ WM+I+TP+ E MK+ +R N+KAR+VEL+   +TPDI+NLQK 
Sbjct: 60  ELRKVSVPPHRYSSLKEHWMKIFTPVVEHMKLQIRFNMKARQVELRVGPETPDIANLQKG 119

Query: 355 ADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFA 414
           ADFV AF+ GF+V DA+ALLR+++L+VE+FEIKDVKTLRG+H SRAIGRL+GK G+TKF 
Sbjct: 120 ADFVKAFLCGFEVDDALALLRLEDLFVETFEIKDVKTLRGDHQSRAIGRLAGKGGRTKFT 179

Query: 415 IENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAE 472
           IEN TKTRIV+AD+KIHILGS+ NI++AR ++C+LILGSP  KVY  LR+V +RL+E
Sbjct: 180 IENVTKTRIVLADSKIHILGSYQNIQLARRAICNLILGSPPSKVYGNLRSVASRLSE 236

[Close]
BLAST of Cp4.1LG08g08260 vs. Swiss-Prot
Match: PNO1_NEMVE (RNA-binding protein pno1 OS=Nematostella vectensis GN=pno1 PE=3 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 2.9e-63
Identity = 116/194 (59.79%), Postives = 155/194 (79.90%), Query Frame = 1 

Query: 278 KPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDLRMNLKARKV 337
           +P F P+K  ++  G+ + RK+ VP HRY+PLK+ WM+I+TP+ E +K+ +R NL +R V
Sbjct: 43  RPSFPPVKAQKLAGGKSETRKIPVPSHRYTPLKENWMKIFTPVVEHLKLQIRFNLGSRHV 102

Query: 338 ELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHL 397
           E++   +T DI  +QK ADFV AF+LGF+V DA+AL+R+D+L++ESFEI DVK L+G+HL
Sbjct: 103 EIRASKETSDIGAVQKAADFVQAFILGFEVEDALALIRLDDLFLESFEIADVKPLKGDHL 162

Query: 398 SRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGK 457
           SRAIGR++GK GKTKF IEN TKTRIV+A+TKIHILGSF NIKIAR ++C+LILGSP  K
Sbjct: 163 SRAIGRVAGKGGKTKFTIENVTKTRIVLAETKIHILGSFQNIKIARTAICNLILGSPPSK 222

Query: 458 VYSKLRAVTARLAE 472
           VY  +RAV +R AE
Sbjct: 223 VYGNMRAVASRSAE 236

[Close]
BLAST of Cp4.1LG08g08260 vs. Swiss-Prot
Match: PNO1_DANRE (RNA-binding protein PNO1 OS=Danio rerio GN=pno1 PE=2 SV=2)

HSP 1 Score: 242.3 bits (617), Expect = 1.1e-62
Identity = 122/209 (58.37%), Postives = 159/209 (76.08%), Query Frame = 1 

Query: 264 VSTQPKPVVSTLPPK-PHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYE 323
           + TQ +   S+ P K PHF  L   ++  G  + RKV VP HRY+PLK+ W++I+TPI E
Sbjct: 42  MDTQTEESSSSAPVKRPHFPALSGDQLGGGVDEMRKVPVPSHRYTPLKENWLKIFTPIVE 101

Query: 324 QMKIDLRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVE 383
            +++ +R NLK R+VE+KT  +T DI  L + ADFV AF+LGF V DA+AL+R+DEL++E
Sbjct: 102 NLQLQVRFNLKTRQVEIKTCKETQDIGALTRAADFVKAFVLGFQVEDALALIRLDELFLE 161

Query: 384 SFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIA 443
           +F++ DVK L+G+HLSRAIGR++GK GKTKF IEN TKTRIV+ADTKIHILGSF NIK+A
Sbjct: 162 TFDVTDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTKTRIVLADTKIHILGSFQNIKMA 221

Query: 444 RDSLCSLILGSPAGKVYSKLRAVTARLAE 472
           R ++C+LILGSP  KVY  LRAV  R AE
Sbjct: 222 RTAICNLILGSPPSKVYGNLRAVATRSAE 250

[Close]
BLAST of Cp4.1LG08g08260 vs. Swiss-Prot
Match: PNO1_ORYLA (RNA-binding protein PNO1 OS=Oryzias latipes GN=pno1 PE=2 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.1e-62
Identity = 117/194 (60.31%), Postives = 155/194 (79.90%), Query Frame = 1 

Query: 278 KPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDLRMNLKARKV 337
           +PHF P+   ++  G  + RKV+VP HRY+PLK+ W++I+TPI E +++ +R NLK R V
Sbjct: 49  RPHFPPISADKLR-GPDEMRKVAVPAHRYTPLKENWLKIFTPIVENLQLQVRFNLKTRNV 108

Query: 338 ELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHL 397
           E+KT  +T DI+ L K ADF+ AF+LGF V DA+AL+R+DEL++ESF++ DVK L+G+HL
Sbjct: 109 EIKTCKETQDIAALTKAADFIKAFVLGFQVDDAMALIRLDELFLESFDVTDVKPLKGDHL 168

Query: 398 SRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGK 457
           SRAIGR++GK GKTKF IEN TKTRIV+ADTKIHILGSF NIK+AR ++C+LILGSP  K
Sbjct: 169 SRAIGRIAGKGGKTKFTIENVTKTRIVLADTKIHILGSFQNIKMARTAICNLILGSPPSK 228

Query: 458 VYSKLRAVTARLAE 472
           VY  +RAV +R AE
Sbjct: 229 VYGNIRAVASRTAE 241

[Close]
BLAST of Cp4.1LG08g08260 vs. TrEMBL
Match: A0A0A0L7D9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G045150 PE=4 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 2.0e-111
Identity = 211/222 (95.05%), Postives = 216/222 (97.30%), Query Frame = 1 

Query: 250 MQSTEASTSMEVEAVSTQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPL 309
           MQS EASTSM+VE +STQ K VVSTLPPKP FDPLKPHEMNDGRVQFRKVSVPPHRYSPL
Sbjct: 1   MQSNEASTSMDVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPL 60

Query: 310 KKAWMEIYTPIYEQMKIDLRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVID 369
           KKAWM+IYTPIY+QMKID+RMNLKARKVELKTRADTPDISNLQK ADFVHAFMLGFDVID
Sbjct: 61  KKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKSADFVHAFMLGFDVID 120

Query: 370 AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK 429
           AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK
Sbjct: 121 AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK 180

Query: 430 IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAE 472
           IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAE
Sbjct: 181 IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAE 222

[Close]
BLAST of Cp4.1LG08g08260 vs. TrEMBL
Match: A0A0A0KQC5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139880 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 3.1e-109
Identity = 206/222 (92.79%), Postives = 212/222 (95.50%), Query Frame = 1 

Query: 250 MQSTEASTSMEVEAVSTQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPL 309
           MQSTE   SMEVE VS++    + TLPPKP FDPLKPHEMNDGRVQFRKVSVPPHRYSPL
Sbjct: 1   MQSTEVPVSMEVETVSSKTVTEIGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPL 60

Query: 310 KKAWMEIYTPIYEQMKIDLRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVID 369
           KKAWMEIYTPIY+QMKID+RMNLKARKVELKTRADTPD+SNLQKCADFVHAFMLGFDVID
Sbjct: 61  KKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVSNLQKCADFVHAFMLGFDVID 120

Query: 370 AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK 429
           AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK
Sbjct: 121 AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK 180

Query: 430 IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAE 472
           IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAE
Sbjct: 181 IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAE 222

[Close]
BLAST of Cp4.1LG08g08260 vs. TrEMBL
Match: M5W0L8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009897mg PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 1.4e-104
Identity = 197/230 (85.65%), Postives = 210/230 (91.30%), Query Frame = 1 

Query: 242 FQTQNHFIMQSTEASTSMEVEAVSTQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSV 301
           FQ  +   MQS EA  SMEVEAV ++P    + LPPKP F+PLK HEM+DGRVQFRKVSV
Sbjct: 41  FQKSDQLKMQSNEAPVSMEVEAVPSKPSSASAALPPKPIFEPLKAHEMSDGRVQFRKVSV 100

Query: 302 PPHRYSPLKKAWMEIYTPIYEQMKIDLRMNLKARKVELKTRADTPDISNLQKCADFVHAF 361
           PPHRYSPLKK WMEIYTP+YEQMKID+RMNLK RKVELK+RADTPD+SNLQKC+DFV AF
Sbjct: 101 PPHRYSPLKKVWMEIYTPVYEQMKIDIRMNLKGRKVELKSRADTPDVSNLQKCSDFVQAF 160

Query: 362 MLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKT 421
           MLGFDVIDAIALLR+DELYVESFEIKDVKTLRGEHLSRAIGRLSGK GKTKFAIENATKT
Sbjct: 161 MLGFDVIDAIALLRMDELYVESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKT 220

Query: 422 RIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAE 472
           RIVIADTKIHILGSFANIK+ARDSLCSLILGSPAGKVYSKLRAVTARLAE
Sbjct: 221 RIVIADTKIHILGSFANIKVARDSLCSLILGSPAGKVYSKLRAVTARLAE 270

[Close]
BLAST of Cp4.1LG08g08260 vs. TrEMBL
Match: M5WCN6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011086mg PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 1.5e-103
Identity = 194/222 (87.39%), Postives = 207/222 (93.24%), Query Frame = 1 

Query: 250 MQSTEASTSMEVEAVSTQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPL 309
           MQS EA  SMEVEAV ++P    + LPPKP F+PLK HEM+DGRVQFRKVSVPPHRYSPL
Sbjct: 1   MQSNEAPVSMEVEAVPSEPSSASAALPPKPIFEPLKAHEMSDGRVQFRKVSVPPHRYSPL 60

Query: 310 KKAWMEIYTPIYEQMKIDLRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVID 369
           KK W++IYTP+YEQMKID+RMNLK RKVELKTRADTPD+SNLQKC+DFV AFMLGFDVID
Sbjct: 61  KKVWLDIYTPVYEQMKIDIRMNLKGRKVELKTRADTPDVSNLQKCSDFVQAFMLGFDVID 120

Query: 370 AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK 429
           AIALLR+DELYVESFEIKDVKTLRGEHLSRAIGRLSGK GKTKFAIENATKTRIVIADTK
Sbjct: 121 AIALLRMDELYVESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADTK 180

Query: 430 IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAE 472
           IHILGSFANIK+ARDSLCSLILGSPAGKVYSKLRAVTARLAE
Sbjct: 181 IHILGSFANIKVARDSLCSLILGSPAGKVYSKLRAVTARLAE 222

[Close]
BLAST of Cp4.1LG08g08260 vs. TrEMBL
Match: F6GTH6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g04320 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 1.5e-103
Identity = 195/222 (87.84%), Postives = 207/222 (93.24%), Query Frame = 1 

Query: 250 MQSTEASTSMEVEAVSTQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPL 309
           MQS E +TSMEVE V ++P P   T P KP F+PLK HEM++GRVQFRKVSVPPHRY+PL
Sbjct: 1   MQSNEPATSMEVENVLSEPNPTSGTFPSKPKFEPLKAHEMSEGRVQFRKVSVPPHRYTPL 60

Query: 310 KKAWMEIYTPIYEQMKIDLRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVID 369
           KKAWMEIYTPIYEQMKID+RMNLKARKVELKTRADTPDISNLQKC DFVHAFMLGF V+D
Sbjct: 61  KKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCTDFVHAFMLGFGVVD 120

Query: 370 AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK 429
           AIALLR+DELYVESFEIKDVKTLRGEHLSRAIGRLSGK GKTKFAIENAT+TRIVIADTK
Sbjct: 121 AIALLRLDELYVESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATRTRIVIADTK 180

Query: 430 IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAE 472
           IHILGSF+NIKIARDSLCSLILGSPAGKVYSKLRAVTARLAE
Sbjct: 181 IHILGSFSNIKIARDSLCSLILGSPAGKVYSKLRAVTARLAE 222

[Close]
BLAST of Cp4.1LG08g08260 vs. TAIR10
Match: AT3G13230.1 (AT3G13230.1 RNA-binding KH domain-containing protein)

HSP 1 Score: 345.9 bits (886), Expect = 3.9e-95
Identity = 174/216 (80.56%), Postives = 197/216 (91.20%), Query Frame = 1 

Query: 256 STSMEVEAVSTQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWME 315
           ST MEVE  +    P    LPPKP F PLK HEM+DG+VQFRK++VPP+RYSPLKKAW++
Sbjct: 4   STQMEVETATEGTVP----LPPKPTFKPLKAHEMSDGKVQFRKIAVPPNRYSPLKKAWLD 63

Query: 316 IYTPIYEQMKIDLRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLR 375
           IYTPIY+QMK+D+RMNLKARKVELKTRADTPDISNLQK ADFVHAFMLGFD+ DAI+LLR
Sbjct: 64  IYTPIYDQMKVDIRMNLKARKVELKTRADTPDISNLQKSADFVHAFMLGFDIPDAISLLR 123

Query: 376 VDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGS 435
           +DELYVESFEIKDVKTL+GEHLSRAIGRLSGK GKTKFAIEN+TKTRIVIADT+IHILG+
Sbjct: 124 MDELYVESFEIKDVKTLKGEHLSRAIGRLSGKGGKTKFAIENSTKTRIVIADTRIHILGA 183

Query: 436 FANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAE 472
           F+NIK+AR SLCSLI+GSPAGKVYSKLR+V+ARL E
Sbjct: 184 FSNIKVARSSLCSLIMGSPAGKVYSKLRSVSARLNE 215

[Close]
BLAST of Cp4.1LG08g08260 vs. TAIR10
Match: AT5G16250.1 (AT5G16250.1 unknown protein)

HSP 1 Score: 243.4 bits (620), Expect = 2.7e-64
Identity = 124/185 (67.03%), Postives = 146/185 (78.92%), Query Frame = 1 

Query: 59  GHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTI 118
           G   SS+ +  SHYHTHK+FL++NYILLGAASSCIFLTLSLRL+PS+CG  LI LH  TI
Sbjct: 2   GFISSSSPVEESHYHTHKIFLFSNYILLGAASSCIFLTLSLRLIPSICGFLLILLHATTI 61

Query: 119 AAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYVREEDGA 178
           AAAVSGCA AS    RW+  HMV TVLTAIFQGSV+VL++T T  FLG LKSYVREED A
Sbjct: 62  AAAVSGCAAASCGRNRWYAAHMVATVLTAIFQGSVSVLIFTNTSKFLGSLKSYVREEDAA 121

Query: 179 VILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDW 238
           VILKL GGL +V+F L+W+VL  AFFLKYYA+V+G    G+G A  R+ KV+ +E+ KDW
Sbjct: 122 VILKLGGGLCIVIFCLDWIVLVCAFFLKYYAYVDG----GDGVAMKRTGKVQSEENPKDW 181

Query: 239 PWPFQ 244
           PWPFQ
Sbjct: 182 PWPFQ 182

[Close]
BLAST of Cp4.1LG08g08260 vs. TAIR10
Match: AT3G02640.1 (AT3G02640.1 unknown protein)

HSP 1 Score: 226.9 bits (577), Expect = 2.7e-59
Identity = 118/183 (64.48%), Postives = 141/183 (77.05%), Query Frame = 1 

Query: 61  PQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAA 120
           PQ   S+  SHY+THKLFL  NY+LLGA+SSCIFLTLSLRL+PSLCG  LI LH  TIAA
Sbjct: 5   PQPQESIQESHYYTHKLFLTANYVLLGASSSCIFLTLSLRLIPSLCGFFLILLHATTIAA 64

Query: 121 AVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYVREEDGAVI 180
           AVSGCA AS    RW+  HM+ TVLTAIFQGSV+VL++T T +FL  L SYVRE++ ++I
Sbjct: 65  AVSGCAAASYGKNRWYAAHMIATVLTAIFQGSVSVLIFTNTSNFLESLNSYVREKEASMI 124

Query: 181 LKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPW 240
           LKLAGGL VV+F LEW+VL LAFFLKYYA+V+   G  NG A  R+ KV+ +E LK+ PW
Sbjct: 125 LKLAGGLCVVIFCLEWIVLVLAFFLKYYAYVD---GDNNGVAMKRTGKVQSEETLKNSPW 184

Query: 241 PFQ 244
            FQ
Sbjct: 185 AFQ 184

[Close]
BLAST of Cp4.1LG08g08260 vs. TAIR10
Match: AT5G36800.1 (AT5G36800.1 unknown protein)

HSP 1 Score: 197.2 bits (500), Expect = 2.3e-50
Identity = 115/183 (62.84%), Postives = 139/183 (75.96%), Query Frame = 1 

Query: 67  MSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCA 126
           MS+S  +TH +FL  NYILLG+ASSCIFLT+SLRL PSL GLSLIFL+ LTIA AVSGC+
Sbjct: 3   MSKSKGNTHNIFLLCNYILLGSASSCIFLTISLRLFPSLSGLSLIFLYTLTIATAVSGCS 62

Query: 127 M-----ASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYVREEDGAVIL 186
           +     ++TAS R +G HMV TVLTAIFQG+V+VL++TRTGDFL  LKSYVREEDG VIL
Sbjct: 63  IFASSTSATASDRLYGSHMVATVLTAIFQGAVSVLIFTRTGDFLRFLKSYVREEDGEVIL 122

Query: 187 KLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWP-W 244
           KL+GGL V+MF LEW+VL LAF LKY  +++      +     R     Q+EDLKDWP +
Sbjct: 123 KLSGGLCVLMFCLEWIVLVLAFLLKYSDYLDESVVDDDDFKVRR-----QEEDLKDWPSY 180

[Close]
BLAST of Cp4.1LG08g08260 vs. TAIR10
Match: AT5G36710.1 (AT5G36710.1 unknown protein)

HSP 1 Score: 197.2 bits (500), Expect = 2.3e-50
Identity = 115/183 (62.84%), Postives = 139/183 (75.96%), Query Frame = 1 

Query: 67  MSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCA 126
           MS+S  +TH +FL  NYILLG+ASSCIFLT+SLRL PSL GLSLIFL+ LTIA AVSGC+
Sbjct: 3   MSKSKGNTHNIFLLCNYILLGSASSCIFLTISLRLFPSLSGLSLIFLYTLTIATAVSGCS 62

Query: 127 M-----ASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYVREEDGAVIL 186
           +     ++TAS R +G HMV TVLTAIFQG+V+VL++TRTGDFL  LKSYVREEDG VIL
Sbjct: 63  IFASSTSATASDRLYGSHMVATVLTAIFQGAVSVLIFTRTGDFLRFLKSYVREEDGEVIL 122

Query: 187 KLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWP-W 244
           KL+GGL V+MF LEW+VL LAF LKY  +++      +     R     Q+EDLKDWP +
Sbjct: 123 KLSGGLCVLMFCLEWIVLVLAFLLKYSDYLDESVVDDDDFKVRR-----QEEDLKDWPSY 180

[Close]
BLAST of Cp4.1LG08g08260 vs. NCBI nr
Match: gi|659096262|ref|XP_008449001.1| (PREDICTED: RNA-binding protein pno1 [Cucumis melo])

HSP 1 Score: 418.7 bits (1075), Expect = 1.4e-113
Identity = 215/222 (96.85%), Postives = 218/222 (98.20%), Query Frame = 1 

Query: 250 MQSTEASTSMEVEAVSTQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPL 309
           MQSTEASTSMEVE +STQ K VVSTLPPKP FDPLKPHEMNDGRVQFRKVSVPPHRYSPL
Sbjct: 1   MQSTEASTSMEVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPL 60

Query: 310 KKAWMEIYTPIYEQMKIDLRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVID 369
           KKAWMEIYTPIY+QMKID+RMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVID
Sbjct: 61  KKAWMEIYTPIYDQMKIDVRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVID 120

Query: 370 AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK 429
           AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK
Sbjct: 121 AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK 180

Query: 430 IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAE 472
           IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAE
Sbjct: 181 IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAE 222

[Close]
BLAST of Cp4.1LG08g08260 vs. NCBI nr
Match: gi|778675742|ref|XP_004148267.2| (PREDICTED: RNA-binding protein pno1 [Cucumis sativus])

HSP 1 Score: 411.0 bits (1055), Expect = 2.8e-111
Identity = 211/222 (95.05%), Postives = 216/222 (97.30%), Query Frame = 1 

Query: 250 MQSTEASTSMEVEAVSTQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPL 309
           MQS EASTSM+VE +STQ K VVSTLPPKP FDPLKPHEMNDGRVQFRKVSVPPHRYSPL
Sbjct: 1   MQSNEASTSMDVETISTQTKDVVSTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPL 60

Query: 310 KKAWMEIYTPIYEQMKIDLRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVID 369
           KKAWM+IYTPIY+QMKID+RMNLKARKVELKTRADTPDISNLQK ADFVHAFMLGFDVID
Sbjct: 61  KKAWMDIYTPIYDQMKIDIRMNLKARKVELKTRADTPDISNLQKSADFVHAFMLGFDVID 120

Query: 370 AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK 429
           AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK
Sbjct: 121 AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK 180

Query: 430 IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAE 472
           IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAE
Sbjct: 181 IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAE 222

[Close]
BLAST of Cp4.1LG08g08260 vs. NCBI nr
Match: gi|449456341|ref|XP_004145908.1| (PREDICTED: RNA-binding protein pno1-like [Cucumis sativus])

HSP 1 Score: 403.7 bits (1036), Expect = 4.5e-109
Identity = 206/222 (92.79%), Postives = 212/222 (95.50%), Query Frame = 1 

Query: 250 MQSTEASTSMEVEAVSTQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPL 309
           MQSTE   SMEVE VS++    + TLPPKP FDPLKPHEMNDGRVQFRKVSVPPHRYSPL
Sbjct: 1   MQSTEVPVSMEVETVSSKTVTEIGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPL 60

Query: 310 KKAWMEIYTPIYEQMKIDLRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVID 369
           KKAWMEIYTPIY+QMKID+RMNLKARKVELKTRADTPD+SNLQKCADFVHAFMLGFDVID
Sbjct: 61  KKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRADTPDVSNLQKCADFVHAFMLGFDVID 120

Query: 370 AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK 429
           AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK
Sbjct: 121 AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK 180

Query: 430 IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAE 472
           IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAE
Sbjct: 181 IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAE 222

[Close]
BLAST of Cp4.1LG08g08260 vs. NCBI nr
Match: gi|659074332|ref|XP_008437547.1| (PREDICTED: RNA-binding protein pno1-like [Cucumis melo])

HSP 1 Score: 400.6 bits (1028), Expect = 3.8e-108
Identity = 205/222 (92.34%), Postives = 212/222 (95.50%), Query Frame = 1 

Query: 250 MQSTEASTSMEVEAVSTQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSVPPHRYSPL 309
           MQSTE   SMEVE VS++    V T+PPKP F+PLKPHEMNDGRVQFRKVSVPPHRYSPL
Sbjct: 1   MQSTEVPVSMEVETVSSKTVTEVGTMPPKPQFEPLKPHEMNDGRVQFRKVSVPPHRYSPL 60

Query: 310 KKAWMEIYTPIYEQMKIDLRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVID 369
           KKAWMEIYTPIY+QMKID+RMNLKARKVELKTRA+TPDISNLQKCADFVHAFMLGFDVID
Sbjct: 61  KKAWMEIYTPIYDQMKIDIRMNLKARKVELKTRAETPDISNLQKCADFVHAFMLGFDVID 120

Query: 370 AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK 429
           AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK
Sbjct: 121 AIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTK 180

Query: 430 IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAE 472
           IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAE
Sbjct: 181 IHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAE 222

[Close]
BLAST of Cp4.1LG08g08260 vs. NCBI nr
Match: gi|595827477|ref|XP_007205707.1| (hypothetical protein PRUPE_ppa009897mg [Prunus persica])

HSP 1 Score: 388.3 bits (996), Expect = 2.0e-104
Identity = 197/230 (85.65%), Postives = 210/230 (91.30%), Query Frame = 1 

Query: 242 FQTQNHFIMQSTEASTSMEVEAVSTQPKPVVSTLPPKPHFDPLKPHEMNDGRVQFRKVSV 301
           FQ  +   MQS EA  SMEVEAV ++P    + LPPKP F+PLK HEM+DGRVQFRKVSV
Sbjct: 41  FQKSDQLKMQSNEAPVSMEVEAVPSKPSSASAALPPKPIFEPLKAHEMSDGRVQFRKVSV 100

Query: 302 PPHRYSPLKKAWMEIYTPIYEQMKIDLRMNLKARKVELKTRADTPDISNLQKCADFVHAF 361
           PPHRYSPLKK WMEIYTP+YEQMKID+RMNLK RKVELK+RADTPD+SNLQKC+DFV AF
Sbjct: 101 PPHRYSPLKKVWMEIYTPVYEQMKIDIRMNLKGRKVELKSRADTPDVSNLQKCSDFVQAF 160

Query: 362 MLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKT 421
           MLGFDVIDAIALLR+DELYVESFEIKDVKTLRGEHLSRAIGRLSGK GKTKFAIENATKT
Sbjct: 161 MLGFDVIDAIALLRMDELYVESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKT 220

Query: 422 RIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAE 472
           RIVIADTKIHILGSFANIK+ARDSLCSLILGSPAGKVYSKLRAVTARLAE
Sbjct: 221 RIVIADTKIHILGSFANIKVARDSLCSLILGSPAGKVYSKLRAVTARLAE 270

The following BLAST results are available for this feature:
BLAST of Cp4.1LG08g08260 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PNO1_DROME4.0e-6565.05RNA-binding protein pno1 OS=Drosophila melanogaster GN=l(1)G0004 PE=2 SV=1[more]
PNO1_DROPS5.8e-6466.67RNA-binding protein pno1 OS=Drosophila pseudoobscura pseudoobscura GN=l(1)G0004 ... [more]
PNO1_NEMVE2.9e-6359.79RNA-binding protein pno1 OS=Nematostella vectensis GN=pno1 PE=3 SV=1[more]
PNO1_DANRE1.1e-6258.37RNA-binding protein PNO1 OS=Danio rerio GN=pno1 PE=2 SV=2[more]
PNO1_ORYLA1.1e-6260.31RNA-binding protein PNO1 OS=Oryzias latipes GN=pno1 PE=2 SV=1[more]
BLAST of Cp4.1LG08g08260 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7D9_CUCSA2.0e-11195.05Uncharacterized protein OS=Cucumis sativus GN=Csa_3G045150 PE=4 SV=1[more]
A0A0A0KQC5_CUCSA3.1e-10992.79Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139880 PE=4 SV=1[more]
M5W0L8_PRUPE1.4e-10485.65Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009897mg PE=4 SV=1[more]
M5WCN6_PRUPE1.5e-10387.39Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011086mg PE=4 SV=1[more]
F6GTH6_VITVI1.5e-10387.84Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g04320 PE=4 SV=... [more]
BLAST of Cp4.1LG08g08260 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G13230.13.9e-9580.56 RNA-binding KH domain-containing protein[more]
AT5G16250.12.7e-6467.03 unknown protein[more]
AT3G02640.12.7e-5964.48 unknown protein[more]
AT5G36800.12.3e-5062.84 unknown protein[more]
AT5G36710.12.3e-5062.84 unknown protein[more]
BLAST of Cp4.1LG08g08260 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659096262|ref|XP_008449001.1|1.4e-11396.85PREDICTED: RNA-binding protein pno1 [Cucumis melo][more]
gi|778675742|ref|XP_004148267.2|2.8e-11195.05PREDICTED: RNA-binding protein pno1 [Cucumis sativus][more]
gi|449456341|ref|XP_004145908.1|4.5e-10992.79PREDICTED: RNA-binding protein pno1-like [Cucumis sativus][more]
gi|659074332|ref|XP_008437547.1|3.8e-10892.34PREDICTED: RNA-binding protein pno1-like [Cucumis melo][more]
gi|595827477|ref|XP_007205707.1|2.0e-10485.65hypothetical protein PRUPE_ppa009897mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR004088KH_dom_type_1
IPR004087KH_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003723 RNA binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g08260.1Cp4.1LG08g08260.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 378..451
score: 1.
IPR004088K Homology domain, type 1GENE3DG3DSA:3.30.1370.10coord: 380..463
score: 4.8
IPR004088K Homology domain, type 1unknownSSF54791Eukaryotic type KH-domain (KH-domain type I)coord: 378..469
score: 3.49
NoneNo IPR availablePANTHERPTHR12826FAMILY NOT NAMEDcoord: 278..471
score: 2.9E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG08g08260Cucsa.041820Cucumber (Gy14) v1cgycpeB0028
Cp4.1LG08g08260CmaCh16G009770Cucurbita maxima (Rimu)cmacpeB365
Cp4.1LG08g08260CmaCh06G006890Cucurbita maxima (Rimu)cmacpeB852
Cp4.1LG08g08260CmoCh06G007060Cucurbita moschata (Rifu)cmocpeB797
Cp4.1LG08g08260Cla004443Watermelon (97103) v1cpewmB834
Cp4.1LG08g08260Csa3G045140Cucumber (Chinese Long) v2cpecuB850
Cp4.1LG08g08260MELO3C014081Melon (DHL92) v3.5.1cpemeB814
Cp4.1LG08g08260ClCG10G004090Watermelon (Charleston Gray)cpewcgB766
Cp4.1LG08g08260CSPI03G03910Wild cucumber (PI 183967)cpecpiB852
Cp4.1LG08g08260Lsi07G014430Bottle gourd (USVL1VR-Ls)cpelsiB721
Cp4.1LG08g08260MELO3C014080.2Melon (DHL92) v3.6.1cpemedB948
Cp4.1LG08g08260CsaV3_3G003950Cucumber (Chinese Long) v3cpecucB1047
Cp4.1LG08g08260Bhi11G000340Wax gourdcpewgoB1074
Cp4.1LG08g08260CsGy3G003910Cucumber (Gy14) v2cgybcpeB445
Cp4.1LG08g08260Carg23535Silver-seed gourdcarcpeB0011
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG08g08260Cp4.1LG14g07990Cucurbita pepo (Zucchini)cpecpeB251
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG08g08260Wax gourdcpewgoB1094
Cp4.1LG08g08260Cucumber (Gy14) v1cgycpeB0029
Cp4.1LG08g08260Cucurbita moschata (Rifu)cmocpeB329
Cp4.1LG08g08260Wild cucumber (PI 183967)cpecpiB870
Cp4.1LG08g08260Cucumber (Chinese Long) v2cpecuB868
Cp4.1LG08g08260Bottle gourd (USVL1VR-Ls)cpelsiB720
Cp4.1LG08g08260Watermelon (Charleston Gray)cpewcgB778
Cp4.1LG08g08260Watermelon (97103) v1cpewmB828
Cp4.1LG08g08260Melon (DHL92) v3.5.1cpemeB811
Cp4.1LG08g08260Cucumber (Gy14) v2cgybcpeB461
Cp4.1LG08g08260Melon (DHL92) v3.6.1cpemedB954
Cp4.1LG08g08260Cucumber (Chinese Long) v3cpecucB1064