ClCG10G004090 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG10G004090
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	AT5g16250/T21H19_170
Location	CG_Chr10 : 5252771 .. 5253337 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTCTCCATTACCGCGAATCCATCAAGCTCAATGAGCCGATCCCATTACCACACTCACAAGCTCTTCCTCTACACAAATTACATCCTCCTCGGCGCCGCCTCCAGCTGCATTTTCCTCACTCTCTCCCTCCGTCTCCTCCCCTCTCTCTGCGGCCTCTCCCTCATCTTTCTCCACATCCTCACCATTGCTGCCGCCGTCTCCGGTTGCGCCATGGCCGCCGCCGCTTCGGCTCGATGGTTCGGAGTACACATGGTGTTCACGGTTCTGACCGCGATATTCCAAGGATCGGTGGCGGTGCTGGTGTATACAAGAACAGGGGATTTTCTGTTGGAGCTGAAATCGTATGTTAGAGAAGAAGATGGGGCTGTGATATTGAAATTGGCTGGTGGATTGAGTGTGGTTATGTTTGTTTTGGAATGGGTTGTTCTTACTTTGGCTTTCTTTTTGAAGTATTATGCGTTTGTGGAAGGTGAAGGGAGTAATAACAATGGTGTTATGAGGAGTGCTAAGGTTCAGCAAGATGAGGATTTGAAAGACTGGCCTTGGCCTTTTCAAGTTTGA

mRNA sequence

ATGGGTTTCTCCATTACCGCGAATCCATCAAGCTCAATGAGCCGATCCCATTACCACACTCACAAGCTCTTCCTCTACACAAATTACATCCTCCTCGGCGCCGCCTCCAGCTGCATTTTCCTCACTCTCTCCCTCCGTCTCCTCCCCTCTCTCTGCGGCCTCTCCCTCATCTTTCTCCACATCCTCACCATTGCTGCCGCCGTCTCCGGTTGCGCCATGGCCGCCGCCGCTTCGGCTCGATGGTTCGGAGTACACATGGTGTTCACGGTTCTGACCGCGATATTCCAAGGATCGGTGGCGGTGCTGGTGTATACAAGAACAGGGGATTTTCTGTTGGAGCTGAAATCGTATGTTAGAGAAGAAGATGGGGCTGTGATATTGAAATTGGCTGGTGGATTGAGTGTGGTTATGTTTGTTTTGGAATGGGTTGTTCTTACTTTGGCTTTCTTTTTGAAGTATTATGCGTTTGTGGAAGGTGAAGGGAGTAATAACAATGGTGTTATGAGGAGTGCTAAGGTTCAGCAAGATGAGGATTTGAAAGACTGGCCTTGGCCTTTTCAAGTTTGA

Coding sequence (CDS)

ATGGGTTTCTCCATTACCGCGAATCCATCAAGCTCAATGAGCCGATCCCATTACCACACTCACAAGCTCTTCCTCTACACAAATTACATCCTCCTCGGCGCCGCCTCCAGCTGCATTTTCCTCACTCTCTCCCTCCGTCTCCTCCCCTCTCTCTGCGGCCTCTCCCTCATCTTTCTCCACATCCTCACCATTGCTGCCGCCGTCTCCGGTTGCGCCATGGCCGCCGCCGCTTCGGCTCGATGGTTCGGAGTACACATGGTGTTCACGGTTCTGACCGCGATATTCCAAGGATCGGTGGCGGTGCTGGTGTATACAAGAACAGGGGATTTTCTGTTGGAGCTGAAATCGTATGTTAGAGAAGAAGATGGGGCTGTGATATTGAAATTGGCTGGTGGATTGAGTGTGGTTATGTTTGTTTTGGAATGGGTTGTTCTTACTTTGGCTTTCTTTTTGAAGTATTATGCGTTTGTGGAAGGTGAAGGGAGTAATAACAATGGTGTTATGAGGAGTGCTAAGGTTCAGCAAGATGAGGATTTGAAAGACTGGCCTTGGCCTTTTCAAGTTTGA

Protein sequence

MGFSITANPSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMAAAASARWFGVHMVFTVLTAIFQGSVAVLVYTRTGDFLLELKSYVREEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNGVMRSAKVQQDEDLKDWPWPFQV

Homology

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BLAST of ClCG10G004090 vs. TrEMBL
Match: A0A0A0L253_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G045140 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 8.1e-93
Identity = 177/189 (93.65%), Postives = 183/189 (96.83%), Query Frame = 1


Query: 1   MGFSITANPSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLH 60
           MGFSIT+ PS+SM+RSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLH
Sbjct: 1   MGFSITSTPSTSMTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLH 60

Query: 61  ILTIAAAVSGCAMAAAASARWFGVHMVFTVLTAIFQGSVAVLVYTRTGDFLLELKSYVRE 120
           ILTIAAAVSGCAMAAA+S RWFGVHMVFTVLTAIFQGSVA+LVYTRTGDFL ELKSYVRE
Sbjct: 61  ILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYVRE 120

Query: 121 EDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNG-VMRSAKVQQDEDL 180
           EDGAVILKLAGGLSVVMFVLEWVVLTLAFFL+YYAFVE EGSNNNG  MRSAKVQQDEDL
Sbjct: 121 EDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVE-EGSNNNGAAMRSAKVQQDEDL 180

Query: 181 KDWPWPFQV 189
           KDWPWPFQV
Sbjct: 181 KDWPWPFQV 188

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BLAST of ClCG10G004090 vs. TrEMBL
Match: B9RM10_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1076800 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.4e-73
Identity = 141/187 (75.40%), Postives = 160/187 (85.56%), Query Frame = 1


Query: 5   ITANPSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTI 64
           IT     S+S+SH+HTHK+FL+ NYILLGAASSCIFLTLSLRLLPS+CG  LI LHILTI
Sbjct: 4   ITLGNPQSVSQSHHHTHKVFLFCNYILLGAASSCIFLTLSLRLLPSICGFFLILLHILTI 63

Query: 65  AAAVSGCAMAAAASARWFGVHMVFTVLTAIFQGSVAVLVYTRTGDFLLELKSYVREEDGA 124
           A AVSGCA A++ + RW+  HMV TVLTAIFQGSV+VL++TRTGDFL +LKSYVREEDG 
Sbjct: 64  AGAVSGCAAASSGTNRWYAAHMVATVLTAIFQGSVSVLIFTRTGDFLGQLKSYVREEDGE 123

Query: 125 VILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGE---GSNNNGVMRSAKVQQDEDLKD 184
           VILKLAGGL VV+F LEWVVLTLAFFLKYYA+VEG+   G  N G+ RSAKVQQ+EDLKD
Sbjct: 124 VILKLAGGLCVVIFCLEWVVLTLAFFLKYYAYVEGDVSSGGGNIGMRRSAKVQQEEDLKD 183

Query: 185 WPWPFQV 189
           WPWPFQV
Sbjct: 184 WPWPFQV 190

[Close]

BLAST of ClCG10G004090 vs. TrEMBL
Match: B9HYG6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s18640g PE=4 SV=2)

HSP 1 Score: 283.5 bits (724), Expect = 1.9e-73
Identity = 141/191 (73.82%), Postives = 163/191 (85.34%), Query Frame = 1


Query: 1   MGFSIT-ANPSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFL 60
           MG SIT  + +SS+S+SHYHTH++FL+ NYILLGAASSCIFLTLSLRL+PS+CG  LI L
Sbjct: 98  MGASITLGSTNSSVSQSHYHTHRVFLFCNYILLGAASSCIFLTLSLRLVPSICGFFLILL 157

Query: 61  HILTIAAAVSGCAMAAAASARWFGVHMVFTVLTAIFQGSVAVLVYTRTGDFLLELKSYVR 120
           H+ TIA AVSGCA A++ + RW+  HMV TVLTAIFQGSV+VL++TRTGDFL  LKSYVR
Sbjct: 158 HVFTIAGAVSGCAAASSGTNRWYAAHMVATVLTAIFQGSVSVLIFTRTGDFLGNLKSYVR 217

Query: 121 EEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNGV--MRSAKVQQDE 180
           EEDG VILKLAGGL VV+F LEWVVLTLAFFLKYYA+VEG+ +N   +   RSAKVQQDE
Sbjct: 218 EEDGDVILKLAGGLCVVIFCLEWVVLTLAFFLKYYAYVEGDANNGGDIAMRRSAKVQQDE 277

Query: 181 DLKDWPWPFQV 189
           DLKDWPWPFQV
Sbjct: 278 DLKDWPWPFQV 288

[Close]

BLAST of ClCG10G004090 vs. TrEMBL
Match: D7ST03_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0499g00020 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 1.9e-73
Identity = 140/190 (73.68%), Postives = 164/190 (86.32%), Query Frame = 1


Query: 1   MGFSITANPSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLH 60
           MG SI  N SSS++ SHYHTHK+FL+ NYILLGAASSCIFLTLSLRLLPS+CG  LI LH
Sbjct: 1   MGLSIH-NQSSSVTESHYHTHKVFLFCNYILLGAASSCIFLTLSLRLLPSVCGFFLILLH 60

Query: 61  ILTIAAAVSGCAMAAAASARWFGVHMVFTVLTAIFQGSVAVLVYTRTGDFLLELKSYVRE 120
           ILTI  AVSGCA A+  ++RW+  HMV TVLTAIFQGSV+VL++TRT DFL +LKSYVRE
Sbjct: 61  ILTITGAVSGCAAASTGTSRWYAAHMVTTVLTAIFQGSVSVLIFTRTSDFLGDLKSYVRE 120

Query: 121 EDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNG--VMRSAKVQQDED 180
           EDGAVILKLAGGLS+++F LEWVV+ LAFFLKYYA+VEG+G  ++G  + +SAKVQQ+ED
Sbjct: 121 EDGAVILKLAGGLSILIFCLEWVVMILAFFLKYYAYVEGDGCGSSGSAMKKSAKVQQEED 180

Query: 181 LKDWPWPFQV 189
           LKDWPWPFQV
Sbjct: 181 LKDWPWPFQV 189

[Close]

BLAST of ClCG10G004090 vs. TrEMBL
Match: V4TB47_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002603mg PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.2e-72
Identity = 141/188 (75.00%), Postives = 160/188 (85.11%), Query Frame = 1


Query: 1   MGFSITANPSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLH 60
           MG S+  N S S++ SH+HTHK+FLY NYILLGAASSCIFLTLSLRLLPS+CG   I LH
Sbjct: 1   MGISLNPN-SQSLNGSHHHTHKVFLYCNYILLGAASSCIFLTLSLRLLPSVCGFFFILLH 60

Query: 61  ILTIAAAVSGCAMAAAASARWFGVHMVFTVLTAIFQGSVAVLVYTRTGDFLLELKSYVRE 120
           ILTIA A+SGCA A++ S+RW+G HMV TVLTAIFQGSV+VLV+TRT DFL +LKSYVRE
Sbjct: 61  ILTIAGAISGCAAASSDSSRWYGAHMVATVLTAIFQGSVSVLVFTRTSDFLGKLKSYVRE 120

Query: 121 EDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNGVMRSAKVQQDEDLK 180
           EDG VILKLAGGL V++F LEWVVLTLAFFLKYYA+VEG G+    V RSAKV Q+EDLK
Sbjct: 121 EDGVVILKLAGGLCVLIFCLEWVVLTLAFFLKYYAYVEG-GNGTPAVRRSAKVSQEEDLK 180

Query: 181 DWPWPFQV 189
           DWPWPFQV
Sbjct: 181 DWPWPFQV 186

[Close]

BLAST of ClCG10G004090 vs. TAIR10
Match: AT5G16250.1 (AT5G16250.1 unknown protein)

HSP 1 Score: 248.1 bits (632), Expect = 4.4e-66
Identity = 122/188 (64.89%), Postives = 146/188 (77.66%), Query Frame = 1


Query: 1   MGFSITANPSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLH 60
           MGF  +++P   +  SHYHTHK+FL++NYILLGAASSCIFLTLSLRL+PS+CG  LI LH
Sbjct: 1   MGFISSSSP---VEESHYHTHKIFLFSNYILLGAASSCIFLTLSLRLIPSICGFLLILLH 60

Query: 61  ILTIAAAVSGCAMAAAASARWFGVHMVFTVLTAIFQGSVAVLVYTRTGDFLLELKSYVRE 120
             TIAAAVSGCA A+    RW+  HMV TVLTAIFQGSV+VL++T T  FL  LKSYVRE
Sbjct: 61  ATTIAAAVSGCAAASCGRNRWYAAHMVATVLTAIFQGSVSVLIFTNTSKFLGSLKSYVRE 120

Query: 121 EDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNGVMRSAKVQQDEDLK 180
           ED AVILKL GGL +V+F L+W+VL  AFFLKYYA+V  +G +   + R+ KVQ +E+ K
Sbjct: 121 EDAAVILKLGGGLCIVIFCLDWIVLVCAFFLKYYAYV--DGGDGVAMKRTGKVQSEENPK 180

Query: 181 DWPWPFQV 189
           DWPWPFQV
Sbjct: 181 DWPWPFQV 183

[Close]

BLAST of ClCG10G004090 vs. TAIR10
Match: AT3G02640.1 (AT3G02640.1 unknown protein)

HSP 1 Score: 238.0 bits (606), Expect = 4.6e-63
Identity = 119/182 (65.38%), Postives = 142/182 (78.02%), Query Frame = 1


Query: 9   PSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAV 68
           P  S+  SHY+THKLFL  NY+LLGA+SSCIFLTLSLRL+PSLCG  LI LH  TIAAAV
Sbjct: 7   PQESIQESHYYTHKLFLTANYVLLGASSSCIFLTLSLRLIPSLCGFFLILLHATTIAAAV 66

Query: 69  SGCAMAAAASARWFGVHMVFTVLTAIFQGSVAVLVYTRTGDFLLELKSYVREEDGAVILK 128
           SGCA A+    RW+  HM+ TVLTAIFQGSV+VL++T T +FL  L SYVRE++ ++ILK
Sbjct: 67  SGCAAASYGKNRWYAAHMIATVLTAIFQGSVSVLIFTNTSNFLESLNSYVREKEASMILK 126

Query: 129 LAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNGV--MRSAKVQQDEDLKDWPWPF 188
           LAGGL VV+F LEW+VL LAFFLKYYA+V+G+   NNGV   R+ KVQ +E LK+ PW F
Sbjct: 127 LAGGLCVVIFCLEWIVLVLAFFLKYYAYVDGD---NNGVAMKRTGKVQSEETLKNSPWAF 185

[Close]

BLAST of ClCG10G004090 vs. TAIR10
Match: AT5G36800.1 (AT5G36800.1 unknown protein)

HSP 1 Score: 211.1 bits (536), Expect = 6.0e-55
Identity = 116/183 (63.39%), Postives = 141/183 (77.05%), Query Frame = 1


Query: 13  MSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCA 72
           MS+S  +TH +FL  NYILLG+ASSCIFLT+SLRL PSL GLSLIFL+ LTIA AVSGC+
Sbjct: 3   MSKSKGNTHNIFLLCNYILLGSASSCIFLTISLRLFPSLSGLSLIFLYTLTIATAVSGCS 62

Query: 73  M-----AAAASARWFGVHMVFTVLTAIFQGSVAVLVYTRTGDFLLELKSYVREEDGAVIL 132
           +     +A AS R +G HMV TVLTAIFQG+V+VL++TRTGDFL  LKSYVREEDG VIL
Sbjct: 63  IFASSTSATASDRLYGSHMVATVLTAIFQGAVSVLIFTRTGDFLRFLKSYVREEDGEVIL 122

Query: 133 KLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNGVMRSAKV-QQDEDLKDWP-WP 189
           KL+GGL V+MF LEW+VL LAF LKY  +++    +++      KV +Q+EDLKDWP +P
Sbjct: 123 KLSGGLCVLMFCLEWIVLVLAFLLKYSDYLDESVVDDD----DFKVRRQEEDLKDWPSYP 181

[Close]

BLAST of ClCG10G004090 vs. TAIR10
Match: AT5G36710.1 (AT5G36710.1 unknown protein)

HSP 1 Score: 211.1 bits (536), Expect = 6.0e-55
Identity = 116/183 (63.39%), Postives = 141/183 (77.05%), Query Frame = 1


Query: 13  MSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCA 72
           MS+S  +TH +FL  NYILLG+ASSCIFLT+SLRL PSL GLSLIFL+ LTIA AVSGC+
Sbjct: 3   MSKSKGNTHNIFLLCNYILLGSASSCIFLTISLRLFPSLSGLSLIFLYTLTIATAVSGCS 62

Query: 73  M-----AAAASARWFGVHMVFTVLTAIFQGSVAVLVYTRTGDFLLELKSYVREEDGAVIL 132
           +     +A AS R +G HMV TVLTAIFQG+V+VL++TRTGDFL  LKSYVREEDG VIL
Sbjct: 63  IFASSTSATASDRLYGSHMVATVLTAIFQGAVSVLIFTRTGDFLRFLKSYVREEDGEVIL 122

Query: 133 KLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNGVMRSAKV-QQDEDLKDWP-WP 189
           KL+GGL V+MF LEW+VL LAF LKY  +++    +++      KV +Q+EDLKDWP +P
Sbjct: 123 KLSGGLCVLMFCLEWIVLVLAFLLKYSDYLDESVVDDD----DFKVRRQEEDLKDWPSYP 181

[Close]

BLAST of ClCG10G004090 vs. NCBI nr
Match: gi|659096260|ref|XP_008449000.1| (PREDICTED: uncharacterized protein LOC103491004 [Cucumis melo])

HSP 1 Score: 355.9 bits (912), Expect = 4.3e-95
Identity = 178/189 (94.18%), Postives = 185/189 (97.88%), Query Frame = 1


Query: 1   MGFSITANPSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLH 60
           MGFSIT+ PS+SM+RSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLH
Sbjct: 1   MGFSITSTPSTSMTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLH 60

Query: 61  ILTIAAAVSGCAMAAAASARWFGVHMVFTVLTAIFQGSVAVLVYTRTGDFLLELKSYVRE 120
           ILTIAAAVSGCAMAAA+S RWFGVHMVFTVLTAIFQGSVA+LVYTRTGDFLLELKSYVRE
Sbjct: 61  ILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLLELKSYVRE 120

Query: 121 EDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNG-VMRSAKVQQDEDL 180
           EDGAVILKLAGGLSVVMFVLEWVVLTLAFFL+YYAFVEG+GSNNNG  MRSAKVQQDEDL
Sbjct: 121 EDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEGDGSNNNGAAMRSAKVQQDEDL 180

Query: 181 KDWPWPFQV 189
           KDWPWPFQV
Sbjct: 181 KDWPWPFQV 189

[Close]

BLAST of ClCG10G004090 vs. NCBI nr
Match: gi|449461074|ref|XP_004148268.1| (PREDICTED: uncharacterized protein LOC101206234 [Cucumis sativus])

HSP 1 Score: 347.8 bits (891), Expect = 1.2e-92
Identity = 177/189 (93.65%), Postives = 183/189 (96.83%), Query Frame = 1


Query: 1   MGFSITANPSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLH 60
           MGFSIT+ PS+SM+RSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLH
Sbjct: 1   MGFSITSTPSTSMTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLH 60

Query: 61  ILTIAAAVSGCAMAAAASARWFGVHMVFTVLTAIFQGSVAVLVYTRTGDFLLELKSYVRE 120
           ILTIAAAVSGCAMAAA+S RWFGVHMVFTVLTAIFQGSVA+LVYTRTGDFL ELKSYVRE
Sbjct: 61  ILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYVRE 120

Query: 121 EDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNG-VMRSAKVQQDEDL 180
           EDGAVILKLAGGLSVVMFVLEWVVLTLAFFL+YYAFVE EGSNNNG  MRSAKVQQDEDL
Sbjct: 121 EDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVE-EGSNNNGAAMRSAKVQQDEDL 180

Query: 181 KDWPWPFQV 189
           KDWPWPFQV
Sbjct: 181 KDWPWPFQV 188

[Close]

BLAST of ClCG10G004090 vs. NCBI nr
Match: gi|255547444|ref|XP_002514779.1| (PREDICTED: uncharacterized protein LOC8263457 [Ricinus communis])

HSP 1 Score: 283.9 bits (725), Expect = 2.1e-73
Identity = 141/187 (75.40%), Postives = 160/187 (85.56%), Query Frame = 1


Query: 5   ITANPSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTI 64
           IT     S+S+SH+HTHK+FL+ NYILLGAASSCIFLTLSLRLLPS+CG  LI LHILTI
Sbjct: 4   ITLGNPQSVSQSHHHTHKVFLFCNYILLGAASSCIFLTLSLRLLPSICGFFLILLHILTI 63

Query: 65  AAAVSGCAMAAAASARWFGVHMVFTVLTAIFQGSVAVLVYTRTGDFLLELKSYVREEDGA 124
           A AVSGCA A++ + RW+  HMV TVLTAIFQGSV+VL++TRTGDFL +LKSYVREEDG 
Sbjct: 64  AGAVSGCAAASSGTNRWYAAHMVATVLTAIFQGSVSVLIFTRTGDFLGQLKSYVREEDGE 123

Query: 125 VILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGE---GSNNNGVMRSAKVQQDEDLKD 184
           VILKLAGGL VV+F LEWVVLTLAFFLKYYA+VEG+   G  N G+ RSAKVQQ+EDLKD
Sbjct: 124 VILKLAGGLCVVIFCLEWVVLTLAFFLKYYAYVEGDVSSGGGNIGMRRSAKVQQEEDLKD 183

Query: 185 WPWPFQV 189
           WPWPFQV
Sbjct: 184 WPWPFQV 190

[Close]

BLAST of ClCG10G004090 vs. NCBI nr
Match: gi|1009114291|ref|XP_015873605.1| (PREDICTED: uncharacterized protein LOC107410666 [Ziziphus jujuba])

HSP 1 Score: 283.9 bits (725), Expect = 2.1e-73
Identity = 142/192 (73.96%), Postives = 160/192 (83.33%), Query Frame = 1


Query: 1   MGFSITANPSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLH 60
           MGFS+  NP SS+  SHYHTHK+FL+ NYILLGAASSCIFLTLSLRL PS+CG  LI LH
Sbjct: 1   MGFSVQTNPPSSIGDSHYHTHKVFLFCNYILLGAASSCIFLTLSLRLFPSICGFFLILLH 60

Query: 61  ILTIAAAVSGCAMAAAA-SARWFGVHMVFTVLTAIFQGSVAVLVYTRTGDFLLELKSYVR 120
           + TI  AVSGCA A+A  + RW+G HMV TVLTAIFQGSV+VL++TRT DFL  LKSYVR
Sbjct: 61  VFTIVGAVSGCAAASAGMTGRWYGAHMVATVLTAIFQGSVSVLIFTRTADFLGNLKSYVR 120

Query: 121 EEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVE---GEGSNNNGVMRSAKVQQD 180
           EEDGAVILKLAGGL +++F LEWVVLTLAFFLKYYA+VE   G  S+N  V RSAKVQQD
Sbjct: 121 EEDGAVILKLAGGLCILIFCLEWVVLTLAFFLKYYAYVEGGDGRVSSNAIVRRSAKVQQD 180

Query: 181 EDLKDWPWPFQV 189
           +DLKDWPWPFQV
Sbjct: 181 DDLKDWPWPFQV 192

[Close]

BLAST of ClCG10G004090 vs. NCBI nr
Match: gi|566191522|ref|XP_002315113.2| (hypothetical protein POPTR_0010s18640g [Populus trichocarpa])

HSP 1 Score: 283.5 bits (724), Expect = 2.7e-73
Identity = 141/191 (73.82%), Postives = 163/191 (85.34%), Query Frame = 1


Query: 1   MGFSIT-ANPSSSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFL 60
           MG SIT  + +SS+S+SHYHTH++FL+ NYILLGAASSCIFLTLSLRL+PS+CG  LI L
Sbjct: 98  MGASITLGSTNSSVSQSHYHTHRVFLFCNYILLGAASSCIFLTLSLRLVPSICGFFLILL 157

Query: 61  HILTIAAAVSGCAMAAAASARWFGVHMVFTVLTAIFQGSVAVLVYTRTGDFLLELKSYVR 120
           H+ TIA AVSGCA A++ + RW+  HMV TVLTAIFQGSV+VL++TRTGDFL  LKSYVR
Sbjct: 158 HVFTIAGAVSGCAAASSGTNRWYAAHMVATVLTAIFQGSVSVLIFTRTGDFLGNLKSYVR 217

Query: 121 EEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNNNGV--MRSAKVQQDE 180
           EEDG VILKLAGGL VV+F LEWVVLTLAFFLKYYA+VEG+ +N   +   RSAKVQQDE
Sbjct: 218 EEDGDVILKLAGGLCVVIFCLEWVVLTLAFFLKYYAYVEGDANNGGDIAMRRSAKVQQDE 277

Query: 181 DLKDWPWPFQV 189
           DLKDWPWPFQV
Sbjct: 278 DLKDWPWPFQV 288

The following BLAST results are available for this feature:

BLAST of ClCG10G004090 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L253_CUCSA	8.1e-93	93.65	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G045140 PE=4 SV=1	[more]
B9RM10_RICCO	1.4e-73	75.40	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1076800 PE=4 SV=1	[more]
B9HYG6_POPTR	1.9e-73	73.82	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s18640g PE=4 SV=2	[more]
D7ST03_VITVI	1.9e-73	73.68	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0499g00020 PE=4 SV=...	[more]
V4TB47_9ROSI	1.2e-72	75.00	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002603mg PE=4 SV=1	[more]

BLAST of ClCG10G004090 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16250.1	4.4e-66	64.89	unknown protein	[more]
AT3G02640.1	4.6e-63	65.38	unknown protein	[more]
AT5G36800.1	6.0e-55	63.39	unknown protein	[more]
AT5G36710.1	6.0e-55	63.39	unknown protein	[more]

BLAST of ClCG10G004090 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659096260\|ref\|XP_008449000.1\|	4.3e-95	94.18	PREDICTED: uncharacterized protein LOC103491004 [Cucumis melo]	[more]
gi\|449461074\|ref\|XP_004148268.1\|	1.2e-92	93.65	PREDICTED: uncharacterized protein LOC101206234 [Cucumis sativus]	[more]
gi\|255547444\|ref\|XP_002514779.1\|	2.1e-73	75.40	PREDICTED: uncharacterized protein LOC8263457 [Ricinus communis]	[more]
gi\|1009114291\|ref\|XP_015873605.1\|	2.1e-73	73.96	PREDICTED: uncharacterized protein LOC107410666 [Ziziphus jujuba]	[more]
gi\|566191522\|ref\|XP_002315113.2\|	2.7e-73	73.82	hypothetical protein POPTR_0010s18640g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G004090.1	ClCG10G004090.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34124	FAMILY NOT NAMED	coord: 2..188 score: 1.1E
None	No IPR available	PANTHER	PTHR34124:SF2	F16B3.27 PROTEIN	coord: 2..188 score: 1.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG10G004090	Csa3G045140	Cucumber (Chinese Long) v2	cuwcgB189
ClCG10G004090	MELO3C014080	Melon (DHL92) v3.5.1	mewcgB415
ClCG10G004090	Cla004442	Watermelon (97103) v1	wcgwmB057
ClCG10G004090	Cla97C10G188560	Watermelon (97103) v2	wcgwmbB038
ClCG10G004090	Bhi11G000340	Wax gourd	wcgwgoB080
ClCG10G004090	CSPI03G03910	Wild cucumber (PI 183967)	cpiwcgB190
ClCG10G004090	Cucsa.041820	Cucumber (Gy14) v1	cgywcgB018
ClCG10G004090	CmoCh06G007060	Cucurbita moschata (Rifu)	cmowcgB730
ClCG10G004090	Cp4.1LG08g08260	Cucurbita pepo (Zucchini)	cpewcgB766
ClCG10G004090	CsGy3G003910	Cucumber (Gy14) v2	cgybwcgB174
ClCG10G004090	MELO3C014080.2	Melon (DHL92) v3.6.1	medwcgB401
ClCG10G004090	Carg23535	Silver-seed gourd	carwcgB0008
ClCG10G004090	CsaV3_3G003950	Cucumber (Chinese Long) v3	cucwcgB194

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG10G004090	Watermelon (97103) v2	wcgwmbB039
ClCG10G004090	Wax gourd	wcgwgoB088
ClCG10G004090	Watermelon (Charleston Gray)	wcgwcgB047
ClCG10G004090	Cucumber (Gy14) v1	cgywcgB019
ClCG10G004090	Cucurbita maxima (Rimu)	cmawcgB285
ClCG10G004090	Cucurbita maxima (Rimu)	cmawcgB286
ClCG10G004090	Cucurbita maxima (Rimu)	cmawcgB727
ClCG10G004090	Cucurbita maxima (Rimu)	cmawcgB730
ClCG10G004090	Cucurbita moschata (Rifu)	cmowcgB277
ClCG10G004090	Cucurbita moschata (Rifu)	cmowcgB280
ClCG10G004090	Cucurbita moschata (Rifu)	cmowcgB733
ClCG10G004090	Wild cucumber (PI 183967)	cpiwcgB194
ClCG10G004090	Wild cucumber (PI 183967)	cpiwcgB448
ClCG10G004090	Cucumber (Chinese Long) v2	cuwcgB192
ClCG10G004090	Melon (DHL92) v3.5.1	mewcgB417
ClCG10G004090	Cucurbita pepo (Zucchini)	cpewcgB194
ClCG10G004090	Cucurbita pepo (Zucchini)	cpewcgB197
ClCG10G004090	Bottle gourd (USVL1VR-Ls)	lsiwcgB038
ClCG10G004090	Bottle gourd (USVL1VR-Ls)	lsiwcgB389