Csa3G002450 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G002450
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionGanglioside-induced differentiation-associated protein; contains IPR001251 (CRAL-TRIO domain)
LocationChr3 : 310801 .. 312734 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTTTTTTTGTTTTTCTCTTTGAAATCTCATCATCAAATTTCACCAAATCCCTTTCATCAATCCTTATCCGTATACTAATTTGTTTACCCTAAACCTTCCTCTCTTTCCCATCTTCACCAGCTTTTGCCCACTTCTTTCACTATGGCTGCTCACCTTCCCCCTCCTCCGCCGGAGCAAAACTACCTCGAAAAGCTCGACGTCTTCAAGATCAAAGGCAGAGATAAGCAAGGCCGCCGCATTCTCCGCATCACTGGAAAATTCTTTCCAGGTTTCCTCTCTCTCTCTCACATTCTCTGCATATTTTCCTTTCTATGTTCTGCTACTGTTTTCTTGCTCTTTTCGTCGAGATCAGATTAAATTGATATACTCTTGTCCTTATCGGTACGGTATTTTGTGCTCAAGAAGTTTTTGAATGTTTTGCCCTAATCTGCTGTGATTCGATTTTTTTGCTCTGTTCTGCTTCCATTTTAGAAGTATGCTTGGATTCTGTTTTCTTGCTTGTTTCGATCGAATTGAATTTTCGACCACAAGTTGTCTGCGGAATAGCGTTACTATGCACTGATTCTATTTTAATTTACTTGCTCTTTTTGGATCGGAGGAATTGAAATTGAAATTGAAATTGAAATTGGACTGTGTTTGAGATGTATTTGTATATTTGTACTGAACGGTATCGTTGCTATGCTTTGATTCTAAGTTCTTGGTGTTTTAAGCAATGAGATTGAATTGTTGTTGTTGTTATTATCGTTGTTTAAATCAGCTCGGGTTGTGAGTTTGGATGTGCTGAAAAAGCATCTGGAGGAGAAGATCTTCCCTAGGCTTAAGAACAAGCGTTTTACGATCTTGTACTTCCATACCGGCGTTCAAAGGAGCCAAAACTTTCCCGGTATCGCCGCCCTTCGATCAATCTATGACGCGATTCCGGCCGCCGTCAAGGCTAATCTTGAAGCCGTGTATTTCGTTCACCCAGACCTCCAGGCCCGACTCTTCCTCGCCACTCTTGGTCGCATTTTCTTCACTAGCGAGTACGATTTTCTAAACTTTCTTCTTCTATCAATTTCACTTTTTATAATATATTCTTTTCAAAATAAACTTAAATATTTATCAACGAATTCAAATACGATATTCCATGTGCAATAAAATTGCATTACATATATAAATATTTTACAATTTTACCTTTTAAAATTATTATCAAATAGATTTTAGAAACAAAATAAGTGCAATGAATTTTAGTTTTCTTCTGTTGTTCCAGTGAAAAATTACTTTGAAGATTTTAGAAACCTATTATTAATTTATAATGTAACCATCAAAATTGATGAAATAAACTTGTTTTTTAATTCATTACTCTTTAAGTTTGAACGCCTAACGTCATGATCTATTGGTAAAGTGATAATGATAGACTTTAGAGGTATTGGAAGATAAAAGAAGAAGTATTTAAAACGTGTTAATGAGAGGGAAATGTTTGGATGTGGGCTTTTAGGGTGTATGGAAAGGTGAGGTACGTGAGCAGAATTGATCTGCTGTGGGAGCATGTACGGAGGAACGAGATCGAGGTTCCAGAGTTCATATATGATCATGATGAAGATCTTGAGTACCGTCCCATGATGGATTATGGTCTCGAGAGTGATCATCCTAGGGTGTATGGTGCACCATCTGTGGAATCTCACGTCTACTCCATGAGGTGCATTTCATAAACACAAAATTTAAAAATGGCCTTCTCTGTTGGTTTTAAGTGAATTTGTGTTTGGAGCTTTGTTTGGCCTCTACTCATTCTTTTTTCTTTTTCGACCTCAAGACCAAGAAGTGCTTTGTATATATTTGATTTGATTTTTTTTTTCTTTCGAAGAAGAAGAAAAATGGTTGTATAAAAAGACGAAGCTATTGGTTTGCTTTTAACTGTATATATTGCCTTTTAATCACATATAACTCTTTTT

mRNA sequence

ATGGCTGCTCACCTTCCCCCTCCTCCGCCGGAGCAAAACTACCTCGAAAAGCTCGACGTCTTCAAGATCAAAGGCAGAGATAAGCAAGGCCGCCGCATTCTCCGCATCACTGGAAAATTCTTTCCAGCTCGGGTTGTGAGTTTGGATGTGCTGAAAAAGCATCTGGAGGAGAAGATCTTCCCTAGGCTTAAGAACAAGCGTTTTACGATCTTGTACTTCCATACCGGCGTTCAAAGGAGCCAAAACTTTCCCGGTATCGCCGCCCTTCGATCAATCTATGACGCGATTCCGGCCGCCGTCAAGGCTAATCTTGAAGCCGTGTATTTCGTTCACCCAGACCTCCAGGCCCGACTCTTCCTCGCCACTCTTGGTCGCATTTTCTTCACTAGCGAGGTGTATGGAAAGGTGAGGTACGTGAGCAGAATTGATCTGCTGTGGGAGCATGTACGGAGGAACGAGATCGAGGTTCCAGAGTTCATATATGATCATGATGAAGATCTTGAGTACCGTCCCATGATGGATTATGGTCTCGAGAGTGATCATCCTAGGGTGTATGGTGCACCATCTGTGGAATCTCACGTCTACTCCATGAGGTGCATTTCATAA

Coding sequence (CDS)

ATGGCTGCTCACCTTCCCCCTCCTCCGCCGGAGCAAAACTACCTCGAAAAGCTCGACGTCTTCAAGATCAAAGGCAGAGATAAGCAAGGCCGCCGCATTCTCCGCATCACTGGAAAATTCTTTCCAGCTCGGGTTGTGAGTTTGGATGTGCTGAAAAAGCATCTGGAGGAGAAGATCTTCCCTAGGCTTAAGAACAAGCGTTTTACGATCTTGTACTTCCATACCGGCGTTCAAAGGAGCCAAAACTTTCCCGGTATCGCCGCCCTTCGATCAATCTATGACGCGATTCCGGCCGCCGTCAAGGCTAATCTTGAAGCCGTGTATTTCGTTCACCCAGACCTCCAGGCCCGACTCTTCCTCGCCACTCTTGGTCGCATTTTCTTCACTAGCGAGGTGTATGGAAAGGTGAGGTACGTGAGCAGAATTGATCTGCTGTGGGAGCATGTACGGAGGAACGAGATCGAGGTTCCAGAGTTCATATATGATCATGATGAAGATCTTGAGTACCGTCCCATGATGGATTATGGTCTCGAGAGTGATCATCCTAGGGTGTATGGTGCACCATCTGTGGAATCTCACGTCTACTCCATGAGGTGCATTTCATAA

Protein sequence

MAAHLPPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPSVESHVYSMRCIS*
Homology
[Close]
BLAST of Csa3G002450 vs. Swiss-Prot
Match: GDAP2_XENTR (Ganglioside-induced differentiation-associated protein 2 OS=Xenopus tropicalis PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.7e-10
Identity = 40/143 (27.97%), Postives = 70/143 (48.95%), Query Frame = 1 

Query: 25  GRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFP 84
           G D  GR ++ + G+  P  ++ ++    +    +   +  K + ++YFHT +    N P
Sbjct: 343 GVDNCGRTVMVVVGRNIPVLLIDMEKALLYFIH-MMDHVAAKEYVLVYFHT-LTGEHNHP 402

Query: 85  GIAALRSIYDAIPAAVKANLEAVYFVHPDLQARL---FLATLGRIFFTSEVYGKVRYVSR 144
               L+++YD +    K NL+A+YFVHP  ++++   F  T    F  S +  KV  V  
Sbjct: 403 DSDFLKNMYDIVDVKYKKNLKALYFVHPTFRSKVSSWFFTT----FTVSGLKDKVHQVES 462

Query: 145 IDLLWEHVRRNEIEVPEFIYDHD 165
           +  L+  V   +IE+P F+ D+D
Sbjct: 463 LHQLFSAVPPEQIEIPPFVLDYD 479

[Close]
BLAST of Csa3G002450 vs. Swiss-Prot
Match: GDAP2_BOVIN (Ganglioside-induced differentiation-associated protein 2 OS=Bos taurus GN=GDAP2 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.3e-09
Identity = 37/143 (25.87%), Postives = 68/143 (47.55%), Query Frame = 1 

Query: 25  GRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFP 84
           G D  GR ++ + G+  P  ++ +D    +    +   +  K + ++YFHT +    N  
Sbjct: 344 GVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEYVLVYFHT-LTSEYNHL 403

Query: 85  GIAALRSIYDAIPAAVKANLEAVYFVHPDLQARL---FLATLGRIFFTSEVYGKVRYVSR 144
               L+ +YD +    K NL+AVYFVHP  ++++   F  T    F  S +  K+ +V  
Sbjct: 404 DSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKVSTWFFTT----FSVSGLKDKIHHVDS 463

Query: 145 IDLLWEHVRRNEIEVPEFIYDHD 165
           +  L+  +   +I+ P F+ ++D
Sbjct: 464 LHQLFSAISPEQIDFPPFVLEYD 480

[Close]
BLAST of Csa3G002450 vs. Swiss-Prot
Match: GDAP2_HUMAN (Ganglioside-induced differentiation-associated protein 2 OS=Homo sapiens GN=GDAP2 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.3e-09
Identity = 37/143 (25.87%), Postives = 68/143 (47.55%), Query Frame = 1 

Query: 25  GRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFP 84
           G D  GR ++ + G+  P  ++ +D    +    +   +  K + ++YFHT +    N  
Sbjct: 344 GVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEYVLVYFHT-LTSEYNHL 403

Query: 85  GIAALRSIYDAIPAAVKANLEAVYFVHPDLQARL---FLATLGRIFFTSEVYGKVRYVSR 144
               L+ +YD +    K NL+AVYFVHP  ++++   F  T    F  S +  K+ +V  
Sbjct: 404 DSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKVSTWFFTT----FSVSGLKDKIHHVDS 463

Query: 145 IDLLWEHVRRNEIEVPEFIYDHD 165
           +  L+  +   +I+ P F+ ++D
Sbjct: 464 LHQLFSAISPEQIDFPPFVLEYD 480

[Close]
BLAST of Csa3G002450 vs. Swiss-Prot
Match: GDAP2_MACFA (Ganglioside-induced differentiation-associated protein 2 OS=Macaca fascicularis GN=GDAP2 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.3e-09
Identity = 37/143 (25.87%), Postives = 68/143 (47.55%), Query Frame = 1 

Query: 25  GRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFP 84
           G D  GR ++ + G+  P  ++ +D    +    +   +  K + ++YFHT +    N  
Sbjct: 308 GVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEYVLVYFHT-LTSEYNHL 367

Query: 85  GIAALRSIYDAIPAAVKANLEAVYFVHPDLQARL---FLATLGRIFFTSEVYGKVRYVSR 144
               L+ +YD +    K NL+AVYFVHP  ++++   F  T    F  S +  K+ +V  
Sbjct: 368 DSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKVSTWFFTT----FSVSGLKDKIHHVDS 427

Query: 145 IDLLWEHVRRNEIEVPEFIYDHD 165
           +  L+  +   +I+ P F+ ++D
Sbjct: 428 LHQLFSAISPEQIDFPPFVLEYD 444

[Close]
BLAST of Csa3G002450 vs. Swiss-Prot
Match: GDAP2_MOUSE (Ganglioside-induced differentiation-associated protein 2 OS=Mus musculus GN=Gdap2 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.3e-09
Identity = 37/143 (25.87%), Postives = 68/143 (47.55%), Query Frame = 1 

Query: 25  GRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFP 84
           G D  GR ++ + G+  P  ++ +D    +    +   +  K + ++YFHT +    N  
Sbjct: 345 GVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEYVLVYFHT-LTSDYNHL 404

Query: 85  GIAALRSIYDAIPAAVKANLEAVYFVHPDLQARL---FLATLGRIFFTSEVYGKVRYVSR 144
               L+ +YD +    K NL+AVYFVHP  ++++   F  T    F  S +  K+ +V  
Sbjct: 405 DSDFLKKLYDVVDIKYKRNLKAVYFVHPTFRSKVSTWFFTT----FSVSGLKDKIHHVDS 464

Query: 145 IDLLWEHVRRNEIEVPEFIYDHD 165
           +  L+  +   +I+ P F+ ++D
Sbjct: 465 LQQLFSAISPEQIDFPPFVLEYD 481

[Close]
BLAST of Csa3G002450 vs. TrEMBL
Match: A0A0A0L0Z7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002450 PE=4 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 8.4e-112
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1 

Query: 1   MAAHLPPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF 60
           MAAHLPPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF
Sbjct: 1   MAAHLPPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF 60

Query: 61  PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL 120
           PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL
Sbjct: 61  PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL 120

Query: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180
           ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD
Sbjct: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180

Query: 181 HPRVYGAPSVESHVYSMRCIS 202
           HPRVYGAPSVESHVYSMRCIS
Sbjct: 181 HPRVYGAPSVESHVYSMRCIS 201

[Close]
BLAST of Csa3G002450 vs. TrEMBL
Match: A0A061DL92_THECC (G-box binding factor 3, putative isoform 1 OS=Theobroma cacao GN=TCM_000112 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 8.5e-80
Identity = 141/193 (73.06%), Postives = 172/193 (89.12%), Query Frame = 1 

Query: 11  EQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTI 70
           ++  ++KLD+FKI G+DK+GR+ILR+TGKFFPAR +S++VLKK+LEE IFPRL  K F++
Sbjct: 10  QEQLIQKLDIFKIHGKDKRGRKILRVTGKFFPARFLSVEVLKKYLEENIFPRLGKKPFSV 69

Query: 71  LYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTS 130
           LY HTGVQRS+NFPGI+ALRSIYDAIP  VK NL+AVYF+HP LQARLFLAT GR+ F+ 
Sbjct: 70  LYVHTGVQRSENFPGISALRSIYDAIPVNVKDNLQAVYFLHPGLQARLFLATFGRLLFSG 129

Query: 131 EVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPSV 190
            +YGK+RYV+R+D +WEHVRRNEIE+P+F+YDHDEDLEYRPMMDYGLESDHPRVYGAP+V
Sbjct: 130 GLYGKLRYVNRLDYVWEHVRRNEIEIPDFVYDHDEDLEYRPMMDYGLESDHPRVYGAPAV 189

Query: 191 ESHV--YSMRCIS 202
           +S V  YSMRCIS
Sbjct: 190 DSPVSMYSMRCIS 202

[Close]
BLAST of Csa3G002450 vs. TrEMBL
Match: D7TV30_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0338g00030 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.2e-78
Identity = 139/196 (70.92%), Postives = 173/196 (88.27%), Query Frame = 1 

Query: 8   PPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKR 67
           P  ++  +EKL++FKI+GRDK+GR+ILRI GK+FPAR +S+DV+KK+LE+KIFP+L  K+
Sbjct: 7   PSEQEQLVEKLEIFKIRGRDKRGRKILRIIGKYFPARTLSVDVVKKYLEDKIFPKLGKKQ 66

Query: 68  FTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIF 127
           F++LY HT V+RS+NFPGI+ALRSIY+AIP  VK NLEAVYFVHP LQ+RLFLAT GR+ 
Sbjct: 67  FSVLYVHTDVERSENFPGISALRSIYEAIPVNVKENLEAVYFVHPGLQSRLFLATFGRLL 126

Query: 128 FTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGA 187
               +YGK+RYV+R+DLLWEHVRRNEIE+P+F+YDHDE+LEYRPMMDYGLESDHPRVYGA
Sbjct: 127 LGGGLYGKLRYVNRLDLLWEHVRRNEIEIPDFVYDHDEELEYRPMMDYGLESDHPRVYGA 186

Query: 188 PSVESHV--YSMRCIS 202
           P+V+S V  YSMRCIS
Sbjct: 187 PAVDSPVSMYSMRCIS 202

[Close]
BLAST of Csa3G002450 vs. TrEMBL
Match: W9SCR4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026601 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 6.1e-78
Identity = 140/190 (73.68%), Postives = 169/190 (88.95%), Query Frame = 1 

Query: 11  EQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTI 70
           ++  +EKL+VFKIKG+DK+GR+ILRI GKFFPAR+VS++VLKK LEEKIFPRL  K F++
Sbjct: 10  QEQLIEKLEVFKIKGKDKRGRKILRIVGKFFPARMVSVEVLKKFLEEKIFPRLGKKPFSV 69

Query: 71  LYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTS 130
           +Y H+GVQRS+NFPGI+ALR+IYDAIP  V+ NLEAVYFVHP LQ+RLFLAT GR  F+ 
Sbjct: 70  VYLHSGVQRSENFPGISALRAIYDAIPIGVRENLEAVYFVHPGLQSRLFLATFGRFLFSG 129

Query: 131 EVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPSV 190
            +YGK+RYVSR+D LWEHVRRNEIE+PEF+YDHD+DLE+RPMMDYGLESDHPRVYGAP+V
Sbjct: 130 GLYGKLRYVSRLDYLWEHVRRNEIEIPEFVYDHDDDLEHRPMMDYGLESDHPRVYGAPAV 189

Query: 191 ESHV--YSMR 199
           +S V  YSMR
Sbjct: 190 DSPVSMYSMR 199

[Close]
BLAST of Csa3G002450 vs. TrEMBL
Match: B9SXL2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0017310 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.0e-77
Identity = 136/193 (70.47%), Postives = 167/193 (86.53%), Query Frame = 1 

Query: 11  EQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTI 70
           +   +EKL++FKI GRDK G  ILRI GKFFPAR++++D LK +LEEKI+PRL+ K F++
Sbjct: 10  QHQLIEKLEIFKILGRDKHGHNILRIIGKFFPARIITVDALKSYLEEKIYPRLETKPFSV 69

Query: 71  LYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTS 130
           LY HTGVQRS+NFPGI+ALRS+YD+IP  VK NL+A+YF+HP LQARLFLAT GR  F+ 
Sbjct: 70  LYVHTGVQRSENFPGISALRSVYDSIPIKVKENLQALYFLHPGLQARLFLATFGRFLFSG 129

Query: 131 EVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPSV 190
            +YGK+RY+SRID LW+HVRRNE+E+PEF++DHDEDLEYRPMMDYGLESDHPRVYGAP+V
Sbjct: 130 GLYGKLRYISRIDYLWDHVRRNEVEIPEFVHDHDEDLEYRPMMDYGLESDHPRVYGAPAV 189

Query: 191 ESHV--YSMRCIS 202
           +S V  YSMRCIS
Sbjct: 190 DSPVSMYSMRCIS 202

[Close]
BLAST of Csa3G002450 vs. TAIR10
Match: AT4G35750.1 (AT4G35750.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein)

HSP 1 Score: 287.7 bits (735), Expect = 5.4e-78
Identity = 135/193 (69.95%), Postives = 162/193 (83.94%), Query Frame = 1 

Query: 11  EQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTI 70
           ++  +EKL++FKI GRDK+GR+ILRI GKFFPAR +SLDVLKK+LEEKIFPRL  K F +
Sbjct: 10  QEQLIEKLEIFKIHGRDKRGRKILRIIGKFFPARFLSLDVLKKYLEEKIFPRLGRKPFAV 69

Query: 71  LYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTS 130
           LY HTGVQRS+NFPGI+ALR+IYDAIP  V+ NL+ VYF+HP LQ+RLFLAT GR  F+ 
Sbjct: 70  LYVHTGVQRSENFPGISALRAIYDAIPVNVRDNLQEVYFLHPGLQSRLFLATCGRFLFSG 129

Query: 131 EVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPSV 190
            +YGK+RY+SR+D LWEHVRRNEIE+PEF+YDHD+DLEYRPMMDYG ESDH RV+   +V
Sbjct: 130 GLYGKLRYISRVDYLWEHVRRNEIEMPEFVYDHDDDLEYRPMMDYGQESDHARVFAGAAV 189

Query: 191 ESHV--YSMRCIS 202
           +S V  +SMRCIS
Sbjct: 190 DSSVSSFSMRCIS 202

[Close]
BLAST of Csa3G002450 vs. TAIR10
Match: AT3G10210.1 (AT3G10210.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein)

HSP 1 Score: 172.9 bits (437), Expect = 2.0e-43
Identity = 76/166 (45.78%), Postives = 115/166 (69.28%), Query Frame = 1 

Query: 15  LEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTILYFH 74
           L+ L  F ++G D+ G RI RI GK+FPARVVS + LKK++ +KI  +       ++Y H
Sbjct: 49  LDLLQFFTLQGLDRSGNRIFRIVGKYFPARVVSAERLKKYISQKISNQCPEGPLCLVYMH 108

Query: 75  TGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTSEVYG 134
           + VQ+  N PGI  LR IY+ +P+ +K  L+ VYF+HP L++RL +ATLGR+  +  +Y 
Sbjct: 109 STVQKDDNSPGITILRWIYEDLPSDIKDRLQLVYFIHPGLRSRLVIATLGRLLLSGGLYW 168

Query: 135 KVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 181
           K++YVSR+  LWE +++ E+E+P+F+ +HD  LE+RP+ DYG+E D
Sbjct: 169 KIKYVSRLQYLWEDIKKGEVEIPDFVKNHDNVLEHRPLTDYGIEPD 214

[Close]
BLAST of Csa3G002450 vs. NCBI nr
Match: gi|449456859|ref|XP_004146166.1| (PREDICTED: ganglioside-induced differentiation-associated protein 2 [Cucumis sativus])

HSP 1 Score: 411.0 bits (1055), Expect = 1.2e-111
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1 

Query: 1   MAAHLPPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF 60
           MAAHLPPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF
Sbjct: 1   MAAHLPPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF 60

Query: 61  PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL 120
           PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL
Sbjct: 61  PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL 120

Query: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180
           ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD
Sbjct: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180

Query: 181 HPRVYGAPSVESHVYSMRCIS 202
           HPRVYGAPSVESHVYSMRCIS
Sbjct: 181 HPRVYGAPSVESHVYSMRCIS 201

[Close]
BLAST of Csa3G002450 vs. NCBI nr
Match: gi|659095283|ref|XP_008448498.1| (PREDICTED: rho GTPase-activating protein 8 [Cucumis melo])

HSP 1 Score: 401.7 bits (1031), Expect = 7.3e-109
Identity = 198/201 (98.51%), Postives = 199/201 (99.00%), Query Frame = 1 

Query: 1   MAAHLPPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF 60
           MAA L PPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF
Sbjct: 1   MAALLHPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF 60

Query: 61  PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL 120
           PRLKNKRFTILYFH+GVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL
Sbjct: 61  PRLKNKRFTILYFHSGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL 120

Query: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180
           ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD
Sbjct: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180

Query: 181 HPRVYGAPSVESHVYSMRCIS 202
           HPRVYGAPSVESHVYSMRCIS
Sbjct: 181 HPRVYGAPSVESHVYSMRCIS 201

[Close]
BLAST of Csa3G002450 vs. NCBI nr
Match: gi|590702210|ref|XP_007046566.1| (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 304.7 bits (779), Expect = 1.2e-79
Identity = 141/193 (73.06%), Postives = 172/193 (89.12%), Query Frame = 1 

Query: 11  EQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTI 70
           ++  ++KLD+FKI G+DK+GR+ILR+TGKFFPAR +S++VLKK+LEE IFPRL  K F++
Sbjct: 10  QEQLIQKLDIFKIHGKDKRGRKILRVTGKFFPARFLSVEVLKKYLEENIFPRLGKKPFSV 69

Query: 71  LYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTS 130
           LY HTGVQRS+NFPGI+ALRSIYDAIP  VK NL+AVYF+HP LQARLFLAT GR+ F+ 
Sbjct: 70  LYVHTGVQRSENFPGISALRSIYDAIPVNVKDNLQAVYFLHPGLQARLFLATFGRLLFSG 129

Query: 131 EVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPSV 190
            +YGK+RYV+R+D +WEHVRRNEIE+P+F+YDHDEDLEYRPMMDYGLESDHPRVYGAP+V
Sbjct: 130 GLYGKLRYVNRLDYVWEHVRRNEIEIPDFVYDHDEDLEYRPMMDYGLESDHPRVYGAPAV 189

Query: 191 ESHV--YSMRCIS 202
           +S V  YSMRCIS
Sbjct: 190 DSPVSMYSMRCIS 202

[Close]
BLAST of Csa3G002450 vs. NCBI nr
Match: gi|694418138|ref|XP_009337087.1| (PREDICTED: ganglioside-induced differentiation-associated-protein 2-like [Pyrus x bretschneideri])

HSP 1 Score: 303.1 bits (775), Expect = 3.5e-79
Identity = 141/193 (73.06%), Postives = 169/193 (87.56%), Query Frame = 1 

Query: 11  EQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTI 70
           +Q  +EKLD+F+I+GRDK+GR +LRI GKFFPAR+VS+D L+K+LEE+IFP ++ K F +
Sbjct: 10  QQELIEKLDIFRIRGRDKRGRTVLRIIGKFFPARIVSVDALRKYLEERIFPEIEKKPFAV 69

Query: 71  LYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTS 130
           LY HTG QR +NFPGI+A+RSIYDAIP AV+ NLEAVYF+HP LQARLFLAT GR FFT 
Sbjct: 70  LYVHTGAQRCENFPGISAVRSIYDAIPIAVRRNLEAVYFLHPGLQARLFLATFGRFFFTD 129

Query: 131 EVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPSV 190
            VYGK+RYVSR+D LWEHVRR+EIEVP+F+YDHDEDLE+RPMMDYGLESDHPRVY AP+V
Sbjct: 130 GVYGKLRYVSRLDYLWEHVRRSEIEVPDFVYDHDEDLEHRPMMDYGLESDHPRVYDAPAV 189

Query: 191 ESHV--YSMRCIS 202
           +S V  YSMRCIS
Sbjct: 190 DSPVSTYSMRCIS 202

[Close]
BLAST of Csa3G002450 vs. NCBI nr
Match: gi|1009159550|ref|XP_015897872.1| (PREDICTED: ganglioside-induced differentiation-associated-protein 2 [Ziziphus jujuba])

HSP 1 Score: 303.1 bits (775), Expect = 3.5e-79
Identity = 143/193 (74.09%), Postives = 170/193 (88.08%), Query Frame = 1 

Query: 11  EQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTI 70
           +Q  LEKL+VFKIKG+DKQGR+ILRI GKF PAR+VS+DVLKK+LE+KI+P+L  K F++
Sbjct: 10  QQQLLEKLEVFKIKGKDKQGRKILRIIGKFLPARIVSVDVLKKYLEQKIYPKLGKKPFSV 69

Query: 71  LYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTS 130
           LY HTGVQRS+NFPGI+ALRSIYD IP  VK NLEAVYFVHP LQARLFLAT GR+ F+ 
Sbjct: 70  LYVHTGVQRSENFPGISALRSIYDTIPINVKENLEAVYFVHPGLQARLFLATFGRLLFSG 129

Query: 131 EVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPSV 190
            +YGK+RYVSR+D LWEHVRRNE+ +PEF++DHDEDLE+RPMMDYGLESDHPRVY AP++
Sbjct: 130 GLYGKLRYVSRVDYLWEHVRRNEVVIPEFVFDHDEDLEHRPMMDYGLESDHPRVYDAPTL 189

Query: 191 ESHV--YSMRCIS 202
           +S V  YSMRCIS
Sbjct: 190 DSPVSMYSMRCIS 202

The following BLAST results are available for this feature:
BLAST of Csa3G002450 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GDAP2_XENTR2.7e-1027.97Ganglioside-induced differentiation-associated protein 2 OS=Xenopus tropicalis P... [more]
GDAP2_BOVIN2.3e-0925.87Ganglioside-induced differentiation-associated protein 2 OS=Bos taurus GN=GDAP2 ... [more]
GDAP2_HUMAN2.3e-0925.87Ganglioside-induced differentiation-associated protein 2 OS=Homo sapiens GN=GDAP... [more]
GDAP2_MACFA2.3e-0925.87Ganglioside-induced differentiation-associated protein 2 OS=Macaca fascicularis ... [more]
GDAP2_MOUSE2.3e-0925.87Ganglioside-induced differentiation-associated protein 2 OS=Mus musculus GN=Gdap... [more]
BLAST of Csa3G002450 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0Z7_CUCSA8.4e-112100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002450 PE=4 SV=1[more]
A0A061DL92_THECC8.5e-8073.06G-box binding factor 3, putative isoform 1 OS=Theobroma cacao GN=TCM_000112 PE=4... [more]
D7TV30_VITVI1.2e-7870.92Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0338g00030 PE=4 SV=... [more]
W9SCR4_9ROSA6.1e-7873.68Uncharacterized protein OS=Morus notabilis GN=L484_026601 PE=4 SV=1[more]
B9SXL2_RICCO1.0e-7770.47Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0017310 PE=4 SV=1[more]
BLAST of Csa3G002450 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G35750.15.4e-7869.95 SEC14 cytosolic factor family protein / phosphoglyceride transfer fa... [more]
AT3G10210.12.0e-4345.78 SEC14 cytosolic factor family protein / phosphoglyceride transfer fa... [more]
BLAST of Csa3G002450 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449456859|ref|XP_004146166.1|1.2e-111100.00PREDICTED: ganglioside-induced differentiation-associated protein 2 [Cucumis sat... [more]
gi|659095283|ref|XP_008448498.1|7.3e-10998.51PREDICTED: rho GTPase-activating protein 8 [Cucumis melo][more]
gi|590702210|ref|XP_007046566.1|1.2e-7973.06SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein... [more]
gi|694418138|ref|XP_009337087.1|3.5e-7973.06PREDICTED: ganglioside-induced differentiation-associated-protein 2-like [Pyrus ... [more]
gi|1009159550|ref|XP_015897872.1|3.5e-7974.09PREDICTED: ganglioside-induced differentiation-associated-protein 2 [Ziziphus ju... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001251CRAL-TRIO_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU103007cucumber EST collection version 3.0transcribed_cluster
CU104449cucumber EST collection version 3.0transcribed_cluster
CU115039cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G002450.1Csa3G002450.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU103007CU103007transcribed_cluster
CU104449CU104449transcribed_cluster
CU115039CU115039transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001251CRAL-TRIO lipid binding domainPFAMPF13716CRAL_TRIO_2coord: 30..165
score: 1.3
IPR001251CRAL-TRIO lipid binding domainSMARTSM00516sec14_4coord: 14..163
score: 1.6
IPR001251CRAL-TRIO lipid binding domainunknownSSF52087CRAL/TRIO domaincoord: 19..154
score: 1.0
NoneNo IPR availablePANTHERPTHR11106GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATEDcoord: 11..201
score: 1.6E
NoneNo IPR availablePANTHERPTHR11106:SF58SUBFAMILY NOT NAMEDcoord: 11..201
score: 1.6E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G002450Cla008930Watermelon (97103) v1cuwmB200
Csa3G002450MELO3C013738Melon (DHL92) v3.5.1cumeB243
Csa3G002450ClCG10G000410Watermelon (Charleston Gray)cuwcgB189
Csa3G002450Lsi07G010730Bottle gourd (USVL1VR-Ls)culsiB228
Csa3G002450MELO3C013738.2Melon (DHL92) v3.6.1cumedB224
Csa3G002450Cla97C10G184940Watermelon (97103) v2cuwmbB181
Csa3G002450Bhi11G000238Wax gourdcuwgoB226
Csa3G002450CSPI03G00410Wild cucumber (PI 183967)cpicuB120
Csa3G002450Cucsa.322950Cucumber (Gy14) v1cgycuB458
Csa3G002450CmaCh06G001420Cucurbita maxima (Rimu)cmacuB827
Csa3G002450CmoCh06G001370Cucurbita moschata (Rifu)cmocuB817
Csa3G002450Cp4.1LG08g13140Cucurbita pepo (Zucchini)cpecuB851
Csa3G002450CsGy3G000380Cucumber (Gy14) v2cgybcuB109
Csa3G002450Carg01191Silver-seed gourdcarcuB0173
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G002450Cucumber (Gy14) v2cgybcuB266
Csa3G002450Melon (DHL92) v3.6.1cumedB252
Csa3G002450Silver-seed gourdcarcuB0462
Csa3G002450Silver-seed gourdcarcuB0662
Csa3G002450Watermelon (97103) v2cuwmbB178
Csa3G002450Wax gourdcuwgoB326
Csa3G002450Cucumber (Chinese Long) v2cucuB119
Csa3G002450Cucumber (Gy14) v1cgycuB024
Csa3G002450Cucurbita maxima (Rimu)cmacuB326
Csa3G002450Cucurbita maxima (Rimu)cmacuB658
Csa3G002450Cucurbita maxima (Rimu)cmacuB854
Csa3G002450Cucurbita moschata (Rifu)cmocuB316
Csa3G002450Cucurbita moschata (Rifu)cmocuB646
Csa3G002450Cucurbita moschata (Rifu)cmocuB842
Csa3G002450Melon (DHL92) v3.5.1cumeB262
Csa3G002450Watermelon (Charleston Gray)cuwcgB209
Csa3G002450Watermelon (97103) v1cuwmB261
Csa3G002450Cucurbita pepo (Zucchini)cpecuB069
Csa3G002450Cucurbita pepo (Zucchini)cpecuB212
Csa3G002450Cucurbita pepo (Zucchini)cpecuB484
Csa3G002450Cucurbita pepo (Zucchini)cpecuB555
Csa3G002450Bottle gourd (USVL1VR-Ls)culsiB165