Cp4.1LG08g13140 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG08g13140
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionCellular retinaldehyde-binding/triple function, C-terminal
LocationCp4.1LG08 : 9364794 .. 9366976 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTTAACCGATATTAAAAAGCAGAGGTGTCATGTGGGGAGGGAAGGATGGTAACAGAATATTCCTATGTGACGAAAACCTTGACCCTGGTCCGCGCCATTTTATCGGCCACCATGATCTTCATTTCTTCCCACCTTTGTTAAAAAATCGATTCAATTCAATTCAATTATTCATTCTTTGTTCTTAATTTATTTTCCAAATCTCGTTCACCAATTCATCTCCACCAAATCCGTTCAATCCATCCTTATCCATATCCGTAGTTTGCCCTAACTGTGATCTGCACGCTACTCCCTTTTTCCTTCTGATTCTTATCGGAGTTCTTCAACTATGTCCGCTCAGGTTCAGCCTCCTCCGCCGGAGCAAAACCAACTCGAGAAGTTCGATGTCTTCAAGATCAAAGGCAGAGACAAACAGTGCCGCCGGATTCTCCGCATCGTCGGAAAATTCTTTCCAGGTTTTCGATTTCTCTCTCATTCTTATTTTCGTCGATGAAATTGAATTTTCGTCGTCTTTTTTACTACTGAGTTTGAATGTCCTCTCAACGAATATCTATATGTTTGCGTTACTATGCTCTGTTTCTGTTTTCTTGTTGTTTTTTTCTTATTCATGAAATTGAATTTATGTCATTGTCTTAAGCGCGTAGTGTGAGTTTGAATGCGTGCTCAAGAAGCATCTGTTTATTTGACCTAATCTGCTTTGATTCGATTTTCCTGCTCTTTTTCGTCGATGAAATTGAATTTCCGTTGTCTCTTTTGATCATCAGCGCGCACTGTGAGTTTGAATTTGCTCAAGAAGCAACTACATATTGTCTTACTCTGCTCTGATTTTATGTTCTTTCTCTGTTCTGATTCTAGTTTCGTTCTATTTTCGTCGATGAAATTGAAAATGAAGTATCTGCGTAATTTGAACTACTAATGCTCCGATTCTAATTTCTTGCTATTTTAATCGATGAGATTGAATACTGATCATCTTTTCTGATAATCAGCGCGGACTGTGAGTTTGAATGTGGTGAAAAATCATCTGGAGGAGAAGATCTTCCCTAGGCTTAAGAACAAGCGTTTCACGATCCTGTACTTTCACACCAGCGTTCAAAGGAGCCAAAATTTCCCCGGAATCGCCGCTCTCCGATCGATCTATGACGCAATTCCGGCCGCCGTCAAGGCTAATCTGGAAGCCGTGTATTTCGTTCACCCAGACCTCCAAGCCAGGCTCTTCCTCGCCACTCTCGGCCGCATTTTCTTCACCAGCGAGTACTATTTTCTAACCTTTTTCCTTGAATCAATTTCAATTTTCCCCCAATTTTCTTGAACATGGTAATCAATTTCACACGTACGAAACGTCAAATCCACATTTTAATTTTAATTTTTTATAAAAAAAAAACGTAAAATGTATTTTTTTGTAATTTTAAATAAGCTGATAATGTATGGGCTGACCCTTTTCTTTTAGAAAAACACATCTGAGGGAAAAAAAAAAAAAAAAAAAAAAAAGTATTTTTGGACTCCACAGAAATAGTTGGATGTAAAATTATATTTATGCCCTTACTCGCTAAATAAAATAAAAAAAGAGTAGAAATAATTGATTTTTTTTTTTTTTTAAACTTATTATTAATGGGGGTAATATTTGAATGTGATAGGGTGTATGGTAAGGTGAGGTACGTGAGTAGGATTGGTCTGCTGTGGGAACATGTAAGGAGGAACGAAATTGAGGTTCCAGAATTCATTTATGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGTCAAGAGAGTGACCATCCTAGGGTTTACGGTGCACCCTCAATGGAATCCCACGTGTACTCCATGAGGTGCATTTCGTAGAGAAAAGCTCTTCTGGGTTCCACTGGGTCCTAAAATGGGCCTTGTTTTAATGGCTTTGTCTTAATTGCTTTTCCTTTTTGGATACCAACACCAAGATGTGCTTGTGTGTATATATGTGCATCTCTTTCTCTTTTTCCTTTTGGAAAGTGGTTGTATATAGTTTTAATATTTGTTTTAATTTTAAGTTCGACATGAATATCTTCTTCTCTCGCCTCCTTTTAGGTCGGTAGAACAAAAGATTTGAACCTTTGATCTTCTGTTCGGACTTATATACTTTGTTAGTTTAGTTAGATTCATGTAATGATAAACTTAAGAAGACATTATTTTGTTCTT

mRNA sequence

ATGAAGGTGTCATGTGGGGAGGGAAGGATGGTTCAGCCTCCTCCGCCGGAGCAAAACCAACTCGAGAAGTTCGATGTCTTCAAGATCAAAGGCAGAGACAAACAGTGCCGCCGGATTCTCCGCATCGTCGGAAAATTCTTTCCAGCGCGGACTGTGAGTTTGAATGTGGTGAAAAATCATCTGGAGGAGAAGATCTTCCCTAGGCTTAAGAACAAGCGTTTCACGATCCTGTACTTTCACACCAGCGTTCAAAGGAGCCAAAATTTCCCCGGAATCGCCGCTCTCCGATCGATCTATGACGCAATTCCGGCCGCCGTCAAGGCTAATCTGGAAGCCGTGTATTTCGTTCACCCAGACCTCCAAGCCAGGCTCTTCCTCGCCACTCTCGGCCGCATTTTCTTCACCAGCGAGTACTATTTTCTAACCTTTTTCCTTGAATCAATTTCAATTTTCCCCCAATTTTCTTGAACATGGTAATCAATTTCACACGTACGAAACGTCAAATCCACATTTTAATTTTAATTTTTTATAAAAAAAAAACGTAAAATGTATTTTTTTGTAATTTTAAATAAGCTGATAATGTATGGGCTGACCCTTTTCTTTTAGAAAAACACATCTGAGGGAAAAAAAAAAAAAAAAAAAAAAAAGTATTTTTGGACTCCACAGAAATAGTTGGATGTAAAATTATATTTATGCCCTTACTCGCTAAATAAAATAAAAAAAGAGTAGAAATAATTGATTTTTTTTTTTTTTTAAACTTATTATTAATGGGGGTAATATTTGAATGTGATAGGGTGTATGGTAAGGTGAGGTACGTGAGTAGGATTGGTCTGCTGTGGGAACATGTAAGGAGGAACGAAATTGAGGTTCCAGAATTCATTTATGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGTCAAGAGAGTGACCATCCTAGGGTTTACGGTGCACCCTCAATGGAATCCCACGTGTACTCCATGAGGTGCATTTCGTAGAGAAAAGCTCTTCTGGGTTCCACTGGGTCCTAAAATGGGCCTTGTTTTAATGGCTTTGTCTTAATTGCTTTTCCTTTTTGGATACCAACACCAAGATGTGCTTGTGTGTATATATGTGCATCTCTTTCTCTTTTTCCTTTTGGAAAGTGGTTGTATATAGTTTTAATATTTGTTTTAATTTTAAGTTCGACATGAATATCTTCTTCTCTCGCCTCCTTTTAGGTCGGTAGAACAAAAGATTTGAACCTTTGATCTTCTGTTCGGACTTATATACTTTGTTAGTTTAGTTAGATTCATGTAATGATAAACTTAAGAAGACATTATTTTGTTCTT

Coding sequence (CDS)

ATGAAGGTGTCATGTGGGGAGGGAAGGATGGTTCAGCCTCCTCCGCCGGAGCAAAACCAACTCGAGAAGTTCGATGTCTTCAAGATCAAAGGCAGAGACAAACAGTGCCGCCGGATTCTCCGCATCGTCGGAAAATTCTTTCCAGCGCGGACTGTGAGTTTGAATGTGGTGAAAAATCATCTGGAGGAGAAGATCTTCCCTAGGCTTAAGAACAAGCGTTTCACGATCCTGTACTTTCACACCAGCGTTCAAAGGAGCCAAAATTTCCCCGGAATCGCCGCTCTCCGATCGATCTATGACGCAATTCCGGCCGCCGTCAAGGCTAATCTGGAAGCCGTGTATTTCGTTCACCCAGACCTCCAAGCCAGGCTCTTCCTCGCCACTCTCGGCCGCATTTTCTTCACCAGCGAGTACTATTTTCTAACCTTTTTCCTTGAATCAATTTCAATTTTCCCCCAATTTTCTTGA

Protein sequence

MKVSCGEGRMVQPPPPEQNQLEKFDVFKIKGRDKQCRRILRIVGKFFPARTVSLNVVKNHLEEKIFPRLKNKRFTILYFHTSVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTSEYYFLTFFLESISIFPQFS
Homology
[Close]
BLAST of Cp4.1LG08g13140 vs. TrEMBL
Match: A0A0A0L0Z7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002450 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.2e-57
Identity = 118/138 (85.51%), Postives = 123/138 (89.13%), Query Frame = 1 

Query: 13  PPPPEQNQLEKFDVFKIKGRDKQCRRILRIVGKFFPARTVSLNVVKNHLEEKIFPRLKNK 72
           PPPPEQN LEK DVFKIKGRDKQ RRILRI GKFFPAR VSL+V+K HLEEKIFPRLKNK
Sbjct: 7   PPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNK 66

Query: 73  RFTILYFHTSVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRI 132
           RFTILYFHT VQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRI
Sbjct: 67  RFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRI 126

Query: 133 FFTSEYYFLTFFLESISI 151
           FFTSE Y    ++  I +
Sbjct: 127 FFTSEVYGKVRYVSRIDL 144

[Close]
BLAST of Cp4.1LG08g13140 vs. TrEMBL
Match: B7FK82_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 3.9e-40
Identity = 83/123 (67.48%), Postives = 100/123 (81.30%), Query Frame = 1 

Query: 17  EQNQLEKFDVFKIKGRDKQCRRILRIVGKFFPARTVSLNVVKNHLEEKIFPRLKNKRFTI 76
           ++  LEK +VFKIKGRDK  R+ILRI+GKFFPAR VS+ V+K  LEE+IFP+L  K+F +
Sbjct: 10  QEELLEKLEVFKIKGRDKHGRKILRIIGKFFPARLVSVEVLKKFLEERIFPKLGKKKFAV 69

Query: 77  LYFHTSVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTS 136
           LY HT VQRS+NF GI++LRS+YDAIPA VK NLEAVYF+HP LQARLFLAT GR FF +
Sbjct: 70  LYIHTGVQRSENFAGISSLRSVYDAIPANVKENLEAVYFIHPGLQARLFLATFGRFFFNA 129

Query: 137 EYY 140
             Y
Sbjct: 130 GLY 132

[Close]
BLAST of Cp4.1LG08g13140 vs. TrEMBL
Match: D7TV30_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0338g00030 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 8.6e-40
Identity = 84/129 (65.12%), Postives = 106/129 (82.17%), Query Frame = 1 

Query: 12  QPPPPEQNQL-EKFDVFKIKGRDKQCRRILRIVGKFFPARTVSLNVVKNHLEEKIFPRLK 71
           Q  P EQ QL EK ++FKI+GRDK+ R+ILRI+GK+FPART+S++VVK +LE+KIFP+L 
Sbjct: 4   QASPSEQEQLVEKLEIFKIRGRDKRGRKILRIIGKYFPARTLSVDVVKKYLEDKIFPKLG 63

Query: 72  NKRFTILYFHTSVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLG 131
            K+F++LY HT V+RS+NFPGI+ALRSIY+AIP  VK NLEAVYFVHP LQ+RLFLAT G
Sbjct: 64  KKQFSVLYVHTDVERSENFPGISALRSIYEAIPVNVKENLEAVYFVHPGLQSRLFLATFG 123

Query: 132 RIFFTSEYY 140
           R+      Y
Sbjct: 124 RLLLGGGLY 132

[Close]
BLAST of Cp4.1LG08g13140 vs. TrEMBL
Match: G7JYT7_MEDTR (Divergent CRAL/TRIO domain protein OS=Medicago truncatula GN=MTR_5g023210 PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.9e-39
Identity = 82/123 (66.67%), Postives = 99/123 (80.49%), Query Frame = 1 

Query: 17  EQNQLEKFDVFKIKGRDKQCRRILRIVGKFFPARTVSLNVVKNHLEEKIFPRLKNKRFTI 76
           ++  LEK +VFKIKGRDK  R+ILRI+GKFFPAR VS+ V+K  LEE+IFP+L  K+F +
Sbjct: 10  QEELLEKLEVFKIKGRDKHGRKILRIIGKFFPARLVSVEVLKKFLEERIFPKLGKKKFAV 69

Query: 77  LYFHTSVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTS 136
           LY HT VQRS+NF GI++LRS+YDAIPA VK NLEAVYF+HP LQARLFLAT GR  F +
Sbjct: 70  LYIHTGVQRSENFAGISSLRSVYDAIPANVKENLEAVYFIHPGLQARLFLATFGRFLFNA 129

Query: 137 EYY 140
             Y
Sbjct: 130 GLY 132

[Close]
BLAST of Cp4.1LG08g13140 vs. TrEMBL
Match: A0A0S3T476_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G146800 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.5e-39
Identity = 80/123 (65.04%), Postives = 100/123 (81.30%), Query Frame = 1 

Query: 17  EQNQLEKFDVFKIKGRDKQCRRILRIVGKFFPARTVSLNVVKNHLEEKIFPRLKNKRFTI 76
           ++  LEK +VFKIKGRDK  R+ILRI+GKFFPAR +++ V+K +LEE++FP+L  ++F +
Sbjct: 10  QEELLEKLEVFKIKGRDKHGRKILRIIGKFFPARLITVEVLKRYLEERVFPKLGKRKFAV 69

Query: 77  LYFHTSVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTS 136
           LY HT VQRS+N PGI+ALRSIYDAIPA VK NLEA YF+HP LQARLFLATLGR  F +
Sbjct: 70  LYVHTDVQRSENLPGISALRSIYDAIPANVKENLEAFYFIHPGLQARLFLATLGRFLFNA 129

Query: 137 EYY 140
             Y
Sbjct: 130 GLY 132

[Close]
BLAST of Cp4.1LG08g13140 vs. TAIR10
Match: AT4G35750.1 (AT4G35750.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein)

HSP 1 Score: 164.9 bits (416), Expect = 4.1e-41
Identity = 82/124 (66.13%), Postives = 100/124 (80.65%), Query Frame = 1 

Query: 17  EQNQL-EKFDVFKIKGRDKQCRRILRIVGKFFPARTVSLNVVKNHLEEKIFPRLKNKRFT 76
           EQ QL EK ++FKI GRDK+ R+ILRI+GKFFPAR +SL+V+K +LEEKIFPRL  K F 
Sbjct: 9   EQEQLIEKLEIFKIHGRDKRGRKILRIIGKFFPARFLSLDVLKKYLEEKIFPRLGRKPFA 68

Query: 77  ILYFHTSVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFT 136
           +LY HT VQRS+NFPGI+ALR+IYDAIP  V+ NL+ VYF+HP LQ+RLFLAT GR  F+
Sbjct: 69  VLYVHTGVQRSENFPGISALRAIYDAIPVNVRDNLQEVYFLHPGLQSRLFLATCGRFLFS 128

Query: 137 SEYY 140
              Y
Sbjct: 129 GGLY 132

[Close]
BLAST of Cp4.1LG08g13140 vs. TAIR10
Match: AT3G10210.1 (AT3G10210.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein)

HSP 1 Score: 104.0 bits (258), Expect = 8.5e-23
Identity = 49/122 (40.16%), Postives = 77/122 (63.11%), Query Frame = 1 

Query: 19  NQLEKFDVFKIKGRDKQCRRILRIVGKFFPARTVSLNVVKNHLEEKIFPRLKNKRFTILY 78
           + L+    F ++G D+   RI RIVGK+FPAR VS   +K ++ +KI  +       ++Y
Sbjct: 47  SDLDLLQFFTLQGLDRSGNRIFRIVGKYFPARVVSAERLKKYISQKISNQCPEGPLCLVY 106

Query: 79  FHTSVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTSEY 138
            H++VQ+  N PGI  LR IY+ +P+ +K  L+ VYF+HP L++RL +ATLGR+  +   
Sbjct: 107 MHSTVQKDDNSPGITILRWIYEDLPSDIKDRLQLVYFIHPGLRSRLVIATLGRLLLSGGL 166

Query: 139 YF 141
           Y+
Sbjct: 167 YW 168

[Close]
BLAST of Cp4.1LG08g13140 vs. NCBI nr
Match: gi|449456859|ref|XP_004146166.1| (PREDICTED: ganglioside-induced differentiation-associated protein 2 [Cucumis sativus])

HSP 1 Score: 230.7 bits (587), Expect = 1.7e-57
Identity = 118/138 (85.51%), Postives = 123/138 (89.13%), Query Frame = 1 

Query: 13  PPPPEQNQLEKFDVFKIKGRDKQCRRILRIVGKFFPARTVSLNVVKNHLEEKIFPRLKNK 72
           PPPPEQN LEK DVFKIKGRDKQ RRILRI GKFFPAR VSL+V+K HLEEKIFPRLKNK
Sbjct: 7   PPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNK 66

Query: 73  RFTILYFHTSVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRI 132
           RFTILYFHT VQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRI
Sbjct: 67  RFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRI 126

Query: 133 FFTSEYYFLTFFLESISI 151
           FFTSE Y    ++  I +
Sbjct: 127 FFTSEVYGKVRYVSRIDL 144

[Close]
BLAST of Cp4.1LG08g13140 vs. NCBI nr
Match: gi|659095283|ref|XP_008448498.1| (PREDICTED: rho GTPase-activating protein 8 [Cucumis melo])

HSP 1 Score: 230.3 bits (586), Expect = 2.2e-57
Identity = 117/141 (82.98%), Postives = 125/141 (88.65%), Query Frame = 1 

Query: 10  MVQPPPPEQNQLEKFDVFKIKGRDKQCRRILRIVGKFFPARTVSLNVVKNHLEEKIFPRL 69
           ++ PPPPEQN LEK DVFKIKGRDKQ RRILRI GKFFPAR VSL+V+K HLEEKIFPRL
Sbjct: 4   LLHPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRL 63

Query: 70  KNKRFTILYFHTSVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATL 129
           KNKRFTILYFH+ VQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATL
Sbjct: 64  KNKRFTILYFHSGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATL 123

Query: 130 GRIFFTSEYYFLTFFLESISI 151
           GRIFFTSE Y    ++  I +
Sbjct: 124 GRIFFTSEVYGKVRYVSRIDL 144

[Close]
BLAST of Cp4.1LG08g13140 vs. NCBI nr
Match: gi|217073614|gb|ACJ85167.1| (unknown [Medicago truncatula])

HSP 1 Score: 172.6 bits (436), Expect = 5.5e-40
Identity = 83/123 (67.48%), Postives = 100/123 (81.30%), Query Frame = 1 

Query: 17  EQNQLEKFDVFKIKGRDKQCRRILRIVGKFFPARTVSLNVVKNHLEEKIFPRLKNKRFTI 76
           ++  LEK +VFKIKGRDK  R+ILRI+GKFFPAR VS+ V+K  LEE+IFP+L  K+F +
Sbjct: 10  QEELLEKLEVFKIKGRDKHGRKILRIIGKFFPARLVSVEVLKKFLEERIFPKLGKKKFAV 69

Query: 77  LYFHTSVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTS 136
           LY HT VQRS+NF GI++LRS+YDAIPA VK NLEAVYF+HP LQARLFLAT GR FF +
Sbjct: 70  LYIHTGVQRSENFAGISSLRSVYDAIPANVKENLEAVYFIHPGLQARLFLATFGRFFFNA 129

Query: 137 EYY 140
             Y
Sbjct: 130 GLY 132

[Close]
BLAST of Cp4.1LG08g13140 vs. NCBI nr
Match: gi|1021515876|ref|XP_016201411.1| (PREDICTED: ganglioside-induced differentiation-associated protein 2 [Arachis ipaensis])

HSP 1 Score: 171.8 bits (434), Expect = 9.5e-40
Identity = 80/123 (65.04%), Postives = 104/123 (84.55%), Query Frame = 1 

Query: 17  EQNQLEKFDVFKIKGRDKQCRRILRIVGKFFPARTVSLNVVKNHLEEKIFPRLKNKRFTI 76
           ++  LEK +VFK+KG+DKQ R+ILRI+GKFFPAR VS+ V+K +LEE++FP++  ++FT+
Sbjct: 12  QEELLEKLEVFKVKGKDKQGRKILRIIGKFFPARFVSVEVLKKYLEERVFPKVGKRKFTV 71

Query: 77  LYFHTSVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTS 136
           +Y HT VQRS+NFPGI+ALRSI+DAIPA V+ NLEAVYF+HP LQARLFLAT GR  F+S
Sbjct: 72  VYVHTGVQRSENFPGISALRSIHDAIPANVRDNLEAVYFIHPGLQARLFLATFGRFLFSS 131

Query: 137 EYY 140
             Y
Sbjct: 132 GVY 134

[Close]
BLAST of Cp4.1LG08g13140 vs. NCBI nr
Match: gi|1012125630|ref|XP_015963563.1| (PREDICTED: ganglioside-induced differentiation-associated protein 2 [Arachis duranensis])

HSP 1 Score: 171.8 bits (434), Expect = 9.5e-40
Identity = 80/123 (65.04%), Postives = 104/123 (84.55%), Query Frame = 1 

Query: 17  EQNQLEKFDVFKIKGRDKQCRRILRIVGKFFPARTVSLNVVKNHLEEKIFPRLKNKRFTI 76
           ++  LEK +VFK+KG+DKQ R+ILRI+GKFFPAR VS+ V+K +LEE++FP++  ++FT+
Sbjct: 12  QEELLEKLEVFKVKGKDKQGRKILRIIGKFFPARFVSVEVLKKYLEERVFPKVGKRKFTV 71

Query: 77  LYFHTSVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTS 136
           +Y HT VQRS+NFPGI+ALRSI+DAIPA V+ NLEAVYF+HP LQARLFLAT GR  F+S
Sbjct: 72  VYVHTGVQRSENFPGISALRSIHDAIPANVRDNLEAVYFIHPGLQARLFLATFGRFLFSS 131

Query: 137 EYY 140
             Y
Sbjct: 132 GVY 134

The following BLAST results are available for this feature:
BLAST of Cp4.1LG08g13140 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG08g13140 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0Z7_CUCSA1.2e-5785.51Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002450 PE=4 SV=1[more]
B7FK82_MEDTR3.9e-4067.48Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1[more]
D7TV30_VITVI8.6e-4065.12Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0338g00030 PE=4 SV=... [more]
G7JYT7_MEDTR1.9e-3966.67Divergent CRAL/TRIO domain protein OS=Medicago truncatula GN=MTR_5g023210 PE=2 S... [more]
A0A0S3T476_PHAAN2.5e-3965.04Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G146800 PE=... [more]
BLAST of Cp4.1LG08g13140 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G35750.14.1e-4166.13 SEC14 cytosolic factor family protein / phosphoglyceride transfer fa... [more]
AT3G10210.18.5e-2340.16 SEC14 cytosolic factor family protein / phosphoglyceride transfer fa... [more]
BLAST of Cp4.1LG08g13140 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449456859|ref|XP_004146166.1|1.7e-5785.51PREDICTED: ganglioside-induced differentiation-associated protein 2 [Cucumis sat... [more]
gi|659095283|ref|XP_008448498.1|2.2e-5782.98PREDICTED: rho GTPase-activating protein 8 [Cucumis melo][more]
gi|217073614|gb|ACJ85167.1|5.5e-4067.48unknown [Medicago truncatula][more]
gi|1021515876|ref|XP_016201411.1|9.5e-4065.04PREDICTED: ganglioside-induced differentiation-associated protein 2 [Arachis ipa... [more]
gi|1012125630|ref|XP_015963563.1|9.5e-4065.04PREDICTED: ganglioside-induced differentiation-associated protein 2 [Arachis dur... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001251CRAL-TRIO_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g13140.1Cp4.1LG08g13140.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001251CRAL-TRIO lipid binding domainPFAMPF13716CRAL_TRIO_2coord: 37..138
score: 1.5
NoneNo IPR availablePANTHERPTHR11106GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATEDcoord: 16..138
score: 1.3
NoneNo IPR availablePANTHERPTHR11106:SF58SUBFAMILY NOT NAMEDcoord: 16..138
score: 1.3