CSPI03G00410 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G00410
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Cellular retinaldehyde-binding/triple function, C-terminal
Location	Chr3 : 329309 .. 331429 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAATCATATTAGCCCCCACAATCCGCTCCTCTCTCCTTTTCCCCCCAATCATCTTCGTCCCTTCCTTTTCCTTTTCCTTTTCCTTTTATTTTTTATTTTTTATTTTTGTTTTTCTCTTTGAAATCTCATCATCAAATTTCACCAAATCCCTTTCATCAATCCTTATCCGTATACTAATTTGTTTACCCTAAACCTTCCTCTCTTTCCCATCTTCACCAGCTTTTGCCCACTTCTTTCACTATGGCTGCTCACCTTCCCCCTCCTCCGCCGGAGCAAAACTACCTCGAAAAGCTCGACGTCTTCAAGATCAAAGGCAGAGATAAGCAAGGCCGCCGCATTCTCCGCATCACTGGAAAATTCTTTCCAGGTTTCCTCTCTCTCTCTCTCACATTCTCTGCATATTTTCCTTTCTATGTTCTGCTACTGTTTTCTTGCTCTTTTCGTCGAGATCAGATTATTGATATACTCTTGTCCTTATCGGTACGGTATTTGTGCTCAAGAAGTTTTTGAATGTTTTGCCCTAATCTGCTGTGATTCGATTTTTTTGCTCTGTTCTGCTTCCATTTTAGAAGTATGCTTGGATTCTGTTTTCTTGCTTGTTTCGATCGAATTGAATTTTCGTCCACAAGTTGTCTGCGGAATAGCGTTACTATGCACTGATTCTATTTTAATTTACTTGCTCTTTTTGGATCGGAGGAATTGAAATTGAAATTGAAATTGAAATTGGACTGTGTTTGAGATGTATTTGTATATTTGTACTGAACGGTATCGTTGCTATGCTTTGATTCTAAGTTCTTGGTGTTTTAAGCAATGAGATTGAATTGTTGTTGTTGTTATTATCGTTGTTTAAATCAGCTCGGGTTGTGAGTTTGGATGTGCTGAAAAAGCATCTGGAGGAGAAGATCTTCCCTAGGCTTAAGAACAAGCGTTTTACGATCTTGTACTTCCATACCGGCGTTCAAAGGAGCCAAAACTTTCCCGGTATCGCCGCCCTTCGATCAATCTATGACGCGATTCCGGCCGCCGTCAAGGCTAATCTTGAAGCCGTGTATTTCGTTCACCCAGACCTCCAGGCCCGACTCTTCCTCGCCACTCTTGGTCGCATTTTCTTCACTAGCGAGTACGATTTTCTAAACTTTCTTCTTCTATCAATTTCACTTTTTATAATATATTCCTTTCAAAATAAACTTAAATATTTATCAACGAATTCAAATATGATATTCCATGTGCAATAAAATTGCATTACATATATAAATATTTTACAATTTTACCTTTTGAAATTATTATCAAATAGATTTTAGAAACAAAATAAGTGCAATGAATTTTAGTTTTCTTCTGTCTTTTATTCTCTAATTTTATGTATCATACCAAAAAGATTATTTTAAAATATAGAAATCTAATAGATTCCAATGTGAATGTTCCAGTGAAAAATTACTTTGAAGATTTTAGAAACCTATTATTAAATTATAATGTAACCATCAAAATTGATGAAATAAACTTGTTTTTTAATTCATTACTCTTTAAGTTTGAACGCCTAACGTCATGATCTATTGGTAAAGTGATAATGATAGACTTTAGAGGTATTGGAAGATAAAAGAAGAAGTATTTAAAACGTGTTAATGAGAGGGAAATGTTTGGATGTGGGCTTTTAGGGTGTATGGAAAGGTGAGGTACGTGAGTAGAATTGATCTGCTGTGGGAGCATGTACGGAGGAACGAGATCGAGGTTCCAGAGTTCATATATGATCATGATGAAGATCTTGAGTACCGTCCCATGATGGATTATGGTCTCGAGAGTGATCATCCTAGGGTGTACGGTGCACCATCTGTGGAATCCCACGTCTACTCCATGAGGTGCATTTCATAAACACAAAATTTAAAAATGGCCTTCTCTGTTGGTTTTAAGTGAATTTGTGTTTGGAGCTTTGTTTGGCCTCTACTCATTCTTTTTTCTTTTTCGACCTCAAGACCAAGAAGTGCTTTGTATATATTTGATTTGATTTTTTTTTTCTTTTGAAGAAGAAGAAAAATGGTTGTATAAAAAGACGAAGCTATTGGTTTGCTTTTAACTGTATATATTGCCTTTTAATCACATATAACTCCTTTTCTTTTGCCCACGC

mRNA sequence

ATGGCTGCTCACCTTCCCCCTCCTCCGCCGGAGCAAAACTACCTCGAAAAGCTCGACGTCTTCAAGATCAAAGGCAGAGATAAGCAAGGCCGCCGCATTCTCCGCATCACTGGAAAATTCTTTCCAGCTCGGGTTGTGAGTTTGGATGTGCTGAAAAAGCATCTGGAGGAGAAGATCTTCCCTAGGCTTAAGAACAAGCGTTTTACGATCTTGTACTTCCATACCGGCGTTCAAAGGAGCCAAAACTTTCCCGGTATCGCCGCCCTTCGATCAATCTATGACGCGATTCCGGCCGCCGTCAAGGCTAATCTTGAAGCCGTGTATTTCGTTCACCCAGACCTCCAGGCCCGACTCTTCCTCGCCACTCTTGGTCGCATTTTCTTCACTAGCGAGGTGTATGGAAAGGTGAGGTACGTGAGTAGAATTGATCTGCTGTGGGAGCATGTACGGAGGAACGAGATCGAGGTTCCAGAGTTCATATATGATCATGATGAAGATCTTGAGTACCGTCCCATGATGGATTATGGTCTCGAGAGTGATCATCCTAGGGTGTACGGTGCACCATCTGTGGAATCCCACGTCTACTCCATGAGGTGCATTTCATAA

Coding sequence (CDS)

ATGGCTGCTCACCTTCCCCCTCCTCCGCCGGAGCAAAACTACCTCGAAAAGCTCGACGTCTTCAAGATCAAAGGCAGAGATAAGCAAGGCCGCCGCATTCTCCGCATCACTGGAAAATTCTTTCCAGCTCGGGTTGTGAGTTTGGATGTGCTGAAAAAGCATCTGGAGGAGAAGATCTTCCCTAGGCTTAAGAACAAGCGTTTTACGATCTTGTACTTCCATACCGGCGTTCAAAGGAGCCAAAACTTTCCCGGTATCGCCGCCCTTCGATCAATCTATGACGCGATTCCGGCCGCCGTCAAGGCTAATCTTGAAGCCGTGTATTTCGTTCACCCAGACCTCCAGGCCCGACTCTTCCTCGCCACTCTTGGTCGCATTTTCTTCACTAGCGAGGTGTATGGAAAGGTGAGGTACGTGAGTAGAATTGATCTGCTGTGGGAGCATGTACGGAGGAACGAGATCGAGGTTCCAGAGTTCATATATGATCATGATGAAGATCTTGAGTACCGTCCCATGATGGATTATGGTCTCGAGAGTGATCATCCTAGGGTGTACGGTGCACCATCTGTGGAATCCCACGTCTACTCCATGAGGTGCATTTCATAA

Homology

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BLAST of CSPI03G00410 vs. Swiss-Prot
Match: GDAP2_XENTR (Ganglioside-induced differentiation-associated protein 2 OS=Xenopus tropicalis PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.5e-10
Identity = 40/143 (27.97%), Postives = 72/143 (50.35%), Query Frame = 1


Query: 25  GRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFP 84
           G D  GR ++ + G+  P  ++ ++    +    +   +  K + ++YFHT +    N P
Sbjct: 343 GVDNCGRTVMVVVGRNIPVLLIDMEKALLYFIH-MMDHVAAKEYVLVYFHT-LTGEHNHP 402

Query: 85  GIAALRSIYDAIPAAVKANLEAVYFVHPDLQARL---FLATLGRIFFTSEVYGKVRYVSR 144
               L+++YD +    K NL+A+YFVHP  ++++   F  T    F  S +  KV  V  
Sbjct: 403 DSDFLKNMYDIVDVKYKKNLKALYFVHPTFRSKVSSWFFTT----FTVSGLKDKVHQVES 462

Query: 145 IDLLWEHVRRNEIEVPEFIYDHD 165
           +  L+  V   +IE+P F+ D+D
Sbjct: 463 LHQLFSAVPPEQIEIPPFVLDYD 479

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BLAST of CSPI03G00410 vs. Swiss-Prot
Match: GDAP2_BOVIN (Ganglioside-induced differentiation-associated protein 2 OS=Bos taurus GN=GDAP2 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.0e-09
Identity = 37/143 (25.87%), Postives = 70/143 (48.95%), Query Frame = 1


Query: 25  GRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFP 84
           G D  GR ++ + G+  P  ++ +D    +    +   +  K + ++YFHT +    N  
Sbjct: 344 GVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEYVLVYFHT-LTSEYNHL 403

Query: 85  GIAALRSIYDAIPAAVKANLEAVYFVHPDLQARL---FLATLGRIFFTSEVYGKVRYVSR 144
               L+ +YD +    K NL+AVYFVHP  ++++   F  T    F  S +  K+ +V  
Sbjct: 404 DSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKVSTWFFTT----FSVSGLKDKIHHVDS 463

Query: 145 IDLLWEHVRRNEIEVPEFIYDHD 165
           +  L+  +   +I+ P F+ ++D
Sbjct: 464 LHQLFSAISPEQIDFPPFVLEYD 480

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BLAST of CSPI03G00410 vs. Swiss-Prot
Match: GDAP2_HUMAN (Ganglioside-induced differentiation-associated protein 2 OS=Homo sapiens GN=GDAP2 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.0e-09
Identity = 37/143 (25.87%), Postives = 70/143 (48.95%), Query Frame = 1


Query: 25  GRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFP 84
           G D  GR ++ + G+  P  ++ +D    +    +   +  K + ++YFHT +    N  
Sbjct: 344 GVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEYVLVYFHT-LTSEYNHL 403

Query: 85  GIAALRSIYDAIPAAVKANLEAVYFVHPDLQARL---FLATLGRIFFTSEVYGKVRYVSR 144
               L+ +YD +    K NL+AVYFVHP  ++++   F  T    F  S +  K+ +V  
Sbjct: 404 DSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKVSTWFFTT----FSVSGLKDKIHHVDS 463

Query: 145 IDLLWEHVRRNEIEVPEFIYDHD 165
           +  L+  +   +I+ P F+ ++D
Sbjct: 464 LHQLFSAISPEQIDFPPFVLEYD 480

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BLAST of CSPI03G00410 vs. Swiss-Prot
Match: GDAP2_MACFA (Ganglioside-induced differentiation-associated protein 2 OS=Macaca fascicularis GN=GDAP2 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.0e-09
Identity = 37/143 (25.87%), Postives = 70/143 (48.95%), Query Frame = 1


Query: 25  GRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFP 84
           G D  GR ++ + G+  P  ++ +D    +    +   +  K + ++YFHT +    N  
Sbjct: 308 GVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEYVLVYFHT-LTSEYNHL 367

Query: 85  GIAALRSIYDAIPAAVKANLEAVYFVHPDLQARL---FLATLGRIFFTSEVYGKVRYVSR 144
               L+ +YD +    K NL+AVYFVHP  ++++   F  T    F  S +  K+ +V  
Sbjct: 368 DSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKVSTWFFTT----FSVSGLKDKIHHVDS 427

Query: 145 IDLLWEHVRRNEIEVPEFIYDHD 165
           +  L+  +   +I+ P F+ ++D
Sbjct: 428 LHQLFSAISPEQIDFPPFVLEYD 444

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BLAST of CSPI03G00410 vs. Swiss-Prot
Match: GDAP2_MOUSE (Ganglioside-induced differentiation-associated protein 2 OS=Mus musculus GN=Gdap2 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.0e-09
Identity = 37/143 (25.87%), Postives = 70/143 (48.95%), Query Frame = 1


Query: 25  GRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFP 84
           G D  GR ++ + G+  P  ++ +D    +    +   +  K + ++YFHT +    N  
Sbjct: 345 GVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIH-VMDHIAVKEYVLVYFHT-LTSDYNHL 404

Query: 85  GIAALRSIYDAIPAAVKANLEAVYFVHPDLQARL---FLATLGRIFFTSEVYGKVRYVSR 144
               L+ +YD +    K NL+AVYFVHP  ++++   F  T    F  S +  K+ +V  
Sbjct: 405 DSDFLKKLYDVVDIKYKRNLKAVYFVHPTFRSKVSTWFFTT----FSVSGLKDKIHHVDS 464

Query: 145 IDLLWEHVRRNEIEVPEFIYDHD 165
           +  L+  +   +I+ P F+ ++D
Sbjct: 465 LQQLFSAISPEQIDFPPFVLEYD 481

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BLAST of CSPI03G00410 vs. TrEMBL
Match: A0A0A0L0Z7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002450 PE=4 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 8.4e-112
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1


Query: 1   MAAHLPPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF 60
           MAAHLPPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF
Sbjct: 1   MAAHLPPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF 60

Query: 61  PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL 120
           PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL
Sbjct: 61  PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL 120

Query: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180
           ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD
Sbjct: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180

Query: 181 HPRVYGAPSVESHVYSMRCIS 202
           HPRVYGAPSVESHVYSMRCIS
Sbjct: 181 HPRVYGAPSVESHVYSMRCIS 201

[Close]

BLAST of CSPI03G00410 vs. TrEMBL
Match: A0A061DL92_THECC (G-box binding factor 3, putative isoform 1 OS=Theobroma cacao GN=TCM_000112 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 5.0e-80
Identity = 141/193 (73.06%), Postives = 172/193 (89.12%), Query Frame = 1


Query: 11  EQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTI 70
           ++  ++KLD+FKI G+DK+GR+ILR+TGKFFPAR +S++VLKK+LEE IFPRL  K F++
Sbjct: 10  QEQLIQKLDIFKIHGKDKRGRKILRVTGKFFPARFLSVEVLKKYLEENIFPRLGKKPFSV 69

Query: 71  LYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTS 130
           LY HTGVQRS+NFPGI+ALRSIYDAIP  VK NL+AVYF+HP LQARLFLAT GR+ F+ 
Sbjct: 70  LYVHTGVQRSENFPGISALRSIYDAIPVNVKDNLQAVYFLHPGLQARLFLATFGRLLFSG 129

Query: 131 EVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPSV 190
            +YGK+RYV+R+D +WEHVRRNEIE+P+F+YDHDEDLEYRPMMDYGLESDHPRVYGAP+V
Sbjct: 130 GLYGKLRYVNRLDYVWEHVRRNEIEIPDFVYDHDEDLEYRPMMDYGLESDHPRVYGAPAV 189

Query: 191 ESHV--YSMRCIS 202
           +S V  YSMRCIS
Sbjct: 190 DSPVSMYSMRCIS 202

[Close]

BLAST of CSPI03G00410 vs. TrEMBL
Match: D7TV30_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0338g00030 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.2e-78
Identity = 139/196 (70.92%), Postives = 173/196 (88.27%), Query Frame = 1


Query: 8   PPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKR 67
           P  ++  +EKL++FKI+GRDK+GR+ILRI GK+FPAR +S+DV+KK+LE+KIFP+L  K+
Sbjct: 7   PSEQEQLVEKLEIFKIRGRDKRGRKILRIIGKYFPARTLSVDVVKKYLEDKIFPKLGKKQ 66

Query: 68  FTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIF 127
           F++LY HT V+RS+NFPGI+ALRSIY+AIP  VK NLEAVYFVHP LQ+RLFLAT GR+ 
Sbjct: 67  FSVLYVHTDVERSENFPGISALRSIYEAIPVNVKENLEAVYFVHPGLQSRLFLATFGRLL 126

Query: 128 FTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGA 187
               +YGK+RYV+R+DLLWEHVRRNEIE+P+F+YDHDE+LEYRPMMDYGLESDHPRVYGA
Sbjct: 127 LGGGLYGKLRYVNRLDLLWEHVRRNEIEIPDFVYDHDEELEYRPMMDYGLESDHPRVYGA 186

Query: 188 PSVESHV--YSMRCIS 202
           P+V+S V  YSMRCIS
Sbjct: 187 PAVDSPVSMYSMRCIS 202

[Close]

BLAST of CSPI03G00410 vs. TrEMBL
Match: W9SCR4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026601 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 3.6e-78
Identity = 140/190 (73.68%), Postives = 169/190 (88.95%), Query Frame = 1


Query: 11  EQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTI 70
           ++  +EKL+VFKIKG+DK+GR+ILRI GKFFPAR+VS++VLKK LEEKIFPRL  K F++
Sbjct: 10  QEQLIEKLEVFKIKGKDKRGRKILRIVGKFFPARMVSVEVLKKFLEEKIFPRLGKKPFSV 69

Query: 71  LYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTS 130
           +Y H+GVQRS+NFPGI+ALR+IYDAIP  V+ NLEAVYFVHP LQ+RLFLAT GR  F+ 
Sbjct: 70  VYLHSGVQRSENFPGISALRAIYDAIPIGVRENLEAVYFVHPGLQSRLFLATFGRFLFSG 129

Query: 131 EVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPSV 190
            +YGK+RYVSR+D LWEHVRRNEIE+PEF+YDHD+DLE+RPMMDYGLESDHPRVYGAP+V
Sbjct: 130 GLYGKLRYVSRLDYLWEHVRRNEIEIPEFVYDHDDDLEHRPMMDYGLESDHPRVYGAPAV 189

Query: 191 ESHV--YSMR 199
           +S V  YSMR
Sbjct: 190 DSPVSMYSMR 199

[Close]

BLAST of CSPI03G00410 vs. TrEMBL
Match: B9SXL2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0017310 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 6.1e-78
Identity = 136/193 (70.47%), Postives = 167/193 (86.53%), Query Frame = 1


Query: 11  EQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTI 70
           +   +EKL++FKI GRDK G  ILRI GKFFPAR++++D LK +LEEKI+PRL+ K F++
Sbjct: 10  QHQLIEKLEIFKILGRDKHGHNILRIIGKFFPARIITVDALKSYLEEKIYPRLETKPFSV 69

Query: 71  LYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTS 130
           LY HTGVQRS+NFPGI+ALRS+YD+IP  VK NL+A+YF+HP LQARLFLAT GR  F+ 
Sbjct: 70  LYVHTGVQRSENFPGISALRSVYDSIPIKVKENLQALYFLHPGLQARLFLATFGRFLFSG 129

Query: 131 EVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPSV 190
            +YGK+RY+SRID LW+HVRRNE+E+PEF++DHDEDLEYRPMMDYGLESDHPRVYGAP+V
Sbjct: 130 GLYGKLRYISRIDYLWDHVRRNEVEIPEFVHDHDEDLEYRPMMDYGLESDHPRVYGAPAV 189

Query: 191 ESHV--YSMRCIS 202
           +S V  YSMRCIS
Sbjct: 190 DSPVSMYSMRCIS 202

[Close]

BLAST of CSPI03G00410 vs. TAIR10
Match: AT4G35750.1 (AT4G35750.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein)

HSP 1 Score: 288.5 bits (737), Expect = 3.2e-78
Identity = 135/193 (69.95%), Postives = 164/193 (84.97%), Query Frame = 1


Query: 11  EQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTI 70
           ++  +EKL++FKI GRDK+GR+ILRI GKFFPAR +SLDVLKK+LEEKIFPRL  K F +
Sbjct: 10  QEQLIEKLEIFKIHGRDKRGRKILRIIGKFFPARFLSLDVLKKYLEEKIFPRLGRKPFAV 69

Query: 71  LYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTS 130
           LY HTGVQRS+NFPGI+ALR+IYDAIP  V+ NL+ VYF+HP LQ+RLFLAT GR  F+ 
Sbjct: 70  LYVHTGVQRSENFPGISALRAIYDAIPVNVRDNLQEVYFLHPGLQSRLFLATCGRFLFSG 129

Query: 131 EVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPSV 190
            +YGK+RY+SR+D LWEHVRRNEIE+PEF+YDHD+DLEYRPMMDYG ESDH RV+   +V
Sbjct: 130 GLYGKLRYISRVDYLWEHVRRNEIEMPEFVYDHDDDLEYRPMMDYGQESDHARVFAGAAV 189

Query: 191 ESHV--YSMRCIS 202
           +S V  +SMRCIS
Sbjct: 190 DSSVSSFSMRCIS 202

[Close]

BLAST of CSPI03G00410 vs. TAIR10
Match: AT3G10210.1 (AT3G10210.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein)

HSP 1 Score: 172.9 bits (437), Expect = 2.0e-43
Identity = 76/166 (45.78%), Postives = 116/166 (69.88%), Query Frame = 1


Query: 15  LEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTILYFH 74
           L+ L  F ++G D+ G RI RI GK+FPARVVS + LKK++ +KI  +       ++Y H
Sbjct: 49  LDLLQFFTLQGLDRSGNRIFRIVGKYFPARVVSAERLKKYISQKISNQCPEGPLCLVYMH 108

Query: 75  TGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTSEVYG 134
           + VQ+  N PGI  LR IY+ +P+ +K  L+ VYF+HP L++RL +ATLGR+  +  +Y 
Sbjct: 109 STVQKDDNSPGITILRWIYEDLPSDIKDRLQLVYFIHPGLRSRLVIATLGRLLLSGGLYW 168

Query: 135 KVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 181
           K++YVSR+  LWE +++ E+E+P+F+ +HD  LE+RP+ DYG+E D
Sbjct: 169 KIKYVSRLQYLWEDIKKGEVEIPDFVKNHDNVLEHRPLTDYGIEPD 214

[Close]

BLAST of CSPI03G00410 vs. TAIR10
Match: AT1G69340.1 (AT1G69340.1 appr-1-p processing enzyme family protein)

HSP 1 Score: 63.9 bits (154), Expect = 1.3e-10
Identity = 35/140 (25.00%), Postives = 76/140 (54.29%), Query Frame = 1


Query: 25  GRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTILYFHTGVQRSQNFP 84
           G D +G  ++ + G  F  R + L+    ++ ++  P ++ K ++I+YFH+     Q  P
Sbjct: 404 GVDTEGHPVMVVVGAHFLLRCLDLERFVLYVIKEFEPVIQ-KPYSIVYFHSAASL-QVQP 463

Query: 85  GIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTSEVYGKVRYVSRIDL 144
            +  ++ +   +    + NL+A+Y +HP    +  + T+ + F  + V+ KV Y  R+  
Sbjct: 464 DLGWMKRLEQILGRKHQRNLQAIYVLHPTFHLKATILTM-QFFVDNVVWKKVVYADRLLQ 523

Query: 145 LWEHVRRNEIEVPEFIYDHD 165
           L+++V R ++ +P+F++ HD
Sbjct: 524 LFKYVPREQLTIPDFVFQHD 540

[Close]

BLAST of CSPI03G00410 vs. NCBI nr
Match: gi|449456859|ref|XP_004146166.1| (PREDICTED: ganglioside-induced differentiation-associated protein 2 [Cucumis sativus])

HSP 1 Score: 411.0 bits (1055), Expect = 1.2e-111
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1


Query: 1   MAAHLPPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF 60
           MAAHLPPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF
Sbjct: 1   MAAHLPPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF 60

Query: 61  PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL 120
           PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL
Sbjct: 61  PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL 120

Query: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180
           ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD
Sbjct: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180

Query: 181 HPRVYGAPSVESHVYSMRCIS 202
           HPRVYGAPSVESHVYSMRCIS
Sbjct: 181 HPRVYGAPSVESHVYSMRCIS 201

[Close]

BLAST of CSPI03G00410 vs. NCBI nr
Match: gi|659095283|ref|XP_008448498.1| (PREDICTED: rho GTPase-activating protein 8 [Cucumis melo])

HSP 1 Score: 401.7 bits (1031), Expect = 7.3e-109
Identity = 198/201 (98.51%), Postives = 199/201 (99.00%), Query Frame = 1


Query: 1   MAAHLPPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF 60
           MAA L PPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF
Sbjct: 1   MAALLHPPPPEQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIF 60

Query: 61  PRLKNKRFTILYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL 120
           PRLKNKRFTILYFH+GVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL
Sbjct: 61  PRLKNKRFTILYFHSGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFL 120

Query: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180
           ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD
Sbjct: 121 ATLGRIFFTSEVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESD 180

Query: 181 HPRVYGAPSVESHVYSMRCIS 202
           HPRVYGAPSVESHVYSMRCIS
Sbjct: 181 HPRVYGAPSVESHVYSMRCIS 201

[Close]

BLAST of CSPI03G00410 vs. NCBI nr
Match: gi|590702210|ref|XP_007046566.1| (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 305.4 bits (781), Expect = 7.1e-80
Identity = 141/193 (73.06%), Postives = 172/193 (89.12%), Query Frame = 1


Query: 11  EQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTI 70
           ++  ++KLD+FKI G+DK+GR+ILR+TGKFFPAR +S++VLKK+LEE IFPRL  K F++
Sbjct: 10  QEQLIQKLDIFKIHGKDKRGRKILRVTGKFFPARFLSVEVLKKYLEENIFPRLGKKPFSV 69

Query: 71  LYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTS 130
           LY HTGVQRS+NFPGI+ALRSIYDAIP  VK NL+AVYF+HP LQARLFLAT GR+ F+ 
Sbjct: 70  LYVHTGVQRSENFPGISALRSIYDAIPVNVKDNLQAVYFLHPGLQARLFLATFGRLLFSG 129

Query: 131 EVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPSV 190
            +YGK+RYV+R+D +WEHVRRNEIE+P+F+YDHDEDLEYRPMMDYGLESDHPRVYGAP+V
Sbjct: 130 GLYGKLRYVNRLDYVWEHVRRNEIEIPDFVYDHDEDLEYRPMMDYGLESDHPRVYGAPAV 189

Query: 191 ESHV--YSMRCIS 202
           +S V  YSMRCIS
Sbjct: 190 DSPVSMYSMRCIS 202

[Close]

BLAST of CSPI03G00410 vs. NCBI nr
Match: gi|694435277|ref|XP_009344810.1| (PREDICTED: ganglioside-induced differentiation-associated protein 2 [Pyrus x bretschneideri])

HSP 1 Score: 303.9 bits (777), Expect = 2.1e-79
Identity = 141/193 (73.06%), Postives = 167/193 (86.53%), Query Frame = 1


Query: 11  EQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTI 70
           +Q  +EKLD+FKIKGRDK+GR +LRI GKFFPAR+VS+D L+K+LEE+IFP ++ K F +
Sbjct: 10  QQELIEKLDIFKIKGRDKRGRTVLRIIGKFFPARIVSVDALRKYLEERIFPEIEKKPFVV 69

Query: 71  LYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTS 130
           LY HTG QR +NFPGI+A+RSIYDA+P  V+ NLEAVY +HP LQARLFLAT GR FFT 
Sbjct: 70  LYVHTGAQRCENFPGISAVRSIYDAVPIGVRQNLEAVYILHPGLQARLFLATFGRFFFTG 129

Query: 131 EVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPSV 190
            VYGK+RYVSR+D LWEHVRRNEIEVP+F+YDHDEDLE+RPMMDYGLESDHPRVY AP+V
Sbjct: 130 GVYGKLRYVSRLDYLWEHVRRNEIEVPDFVYDHDEDLEHRPMMDYGLESDHPRVYDAPAV 189

Query: 191 ESHV--YSMRCIS 202
           +S V  YSMRCIS
Sbjct: 190 DSPVSTYSMRCIS 202

[Close]

BLAST of CSPI03G00410 vs. NCBI nr
Match: gi|1009159550|ref|XP_015897872.1| (PREDICTED: ganglioside-induced differentiation-associated-protein 2 [Ziziphus jujuba])

HSP 1 Score: 303.9 bits (777), Expect = 2.1e-79
Identity = 143/193 (74.09%), Postives = 170/193 (88.08%), Query Frame = 1


Query: 11  EQNYLEKLDVFKIKGRDKQGRRILRITGKFFPARVVSLDVLKKHLEEKIFPRLKNKRFTI 70
           +Q  LEKL+VFKIKG+DKQGR+ILRI GKF PAR+VS+DVLKK+LE+KI+P+L  K F++
Sbjct: 10  QQQLLEKLEVFKIKGKDKQGRKILRIIGKFLPARIVSVDVLKKYLEQKIYPKLGKKPFSV 69

Query: 71  LYFHTGVQRSQNFPGIAALRSIYDAIPAAVKANLEAVYFVHPDLQARLFLATLGRIFFTS 130
           LY HTGVQRS+NFPGI+ALRSIYD IP  VK NLEAVYFVHP LQARLFLAT GR+ F+ 
Sbjct: 70  LYVHTGVQRSENFPGISALRSIYDTIPINVKENLEAVYFVHPGLQARLFLATFGRLLFSG 129

Query: 131 EVYGKVRYVSRIDLLWEHVRRNEIEVPEFIYDHDEDLEYRPMMDYGLESDHPRVYGAPSV 190
            +YGK+RYVSR+D LWEHVRRNE+ +PEF++DHDEDLE+RPMMDYGLESDHPRVY AP++
Sbjct: 130 GLYGKLRYVSRVDYLWEHVRRNEVVIPEFVFDHDEDLEHRPMMDYGLESDHPRVYDAPTL 189

Query: 191 ESHV--YSMRCIS 202
           +S V  YSMRCIS
Sbjct: 190 DSPVSMYSMRCIS 202

The following BLAST results are available for this feature:

BLAST of CSPI03G00410 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GDAP2_XENTR	3.5e-10	27.97	Ganglioside-induced differentiation-associated protein 2 OS=Xenopus tropicalis P...	[more]
GDAP2_BOVIN	3.0e-09	25.87	Ganglioside-induced differentiation-associated protein 2 OS=Bos taurus GN=GDAP2 ...	[more]
GDAP2_HUMAN	3.0e-09	25.87	Ganglioside-induced differentiation-associated protein 2 OS=Homo sapiens GN=GDAP...	[more]
GDAP2_MACFA	3.0e-09	25.87	Ganglioside-induced differentiation-associated protein 2 OS=Macaca fascicularis ...	[more]
GDAP2_MOUSE	3.0e-09	25.87	Ganglioside-induced differentiation-associated protein 2 OS=Mus musculus GN=Gdap...	[more]

BLAST of CSPI03G00410 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0Z7_CUCSA	8.4e-112	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002450 PE=4 SV=1	[more]
A0A061DL92_THECC	5.0e-80	73.06	G-box binding factor 3, putative isoform 1 OS=Theobroma cacao GN=TCM_000112 PE=4...	[more]
D7TV30_VITVI	1.2e-78	70.92	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0338g00030 PE=4 SV=...	[more]
W9SCR4_9ROSA	3.6e-78	73.68	Uncharacterized protein OS=Morus notabilis GN=L484_026601 PE=4 SV=1	[more]
B9SXL2_RICCO	6.1e-78	70.47	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0017310 PE=4 SV=1	[more]

BLAST of CSPI03G00410 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G35750.1	3.2e-78	69.95	SEC14 cytosolic factor family protein / phosphoglyceride transfer fa...	[more]
AT3G10210.1	2.0e-43	45.78	SEC14 cytosolic factor family protein / phosphoglyceride transfer fa...	[more]
AT1G69340.1	1.3e-10	25.00	appr-1-p processing enzyme family protein	[more]

BLAST of CSPI03G00410 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449456859\|ref\|XP_004146166.1\|	1.2e-111	100.00	PREDICTED: ganglioside-induced differentiation-associated protein 2 [Cucumis sat...	[more]
gi\|659095283\|ref\|XP_008448498.1\|	7.3e-109	98.51	PREDICTED: rho GTPase-activating protein 8 [Cucumis melo]	[more]
gi\|590702210\|ref\|XP_007046566.1\|	7.1e-80	73.06	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein...	[more]
gi\|694435277\|ref\|XP_009344810.1\|	2.1e-79	73.06	PREDICTED: ganglioside-induced differentiation-associated protein 2 [Pyrus x bre...	[more]
gi\|1009159550\|ref\|XP_015897872.1\|	2.1e-79	74.09	PREDICTED: ganglioside-induced differentiation-associated-protein 2 [Ziziphus ju...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001251	CRAL-TRIO_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G00410.1	CSPI03G00410.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001251	CRAL-TRIO lipid binding domain	PFAM	PF13716	CRAL_TRIO_2	coord: 30..165 score: 1.3
IPR001251	CRAL-TRIO lipid binding domain	SMART	SM00516	sec14_4	coord: 14..163 score: 1.6
IPR001251	CRAL-TRIO lipid binding domain	unknown	SSF52087	CRAL/TRIO domain	coord: 19..154 score: 1.0
None	No IPR available	PANTHER	PTHR11106	GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED	coord: 11..201 score: 1.6E
None	No IPR available	PANTHER	PTHR11106:SF58	SUBFAMILY NOT NAMED	coord: 11..201 score: 1.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI03G00410	Cla008930	Watermelon (97103) v1	cpiwmB200
CSPI03G00410	Csa3G002450	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G00410	MELO3C013738	Melon (DHL92) v3.5.1	cpimeB240
CSPI03G00410	ClCG10G000410	Watermelon (Charleston Gray)	cpiwcgB190
CSPI03G00410	Lsi07G010730	Bottle gourd (USVL1VR-Ls)	cpilsiB227
CSPI03G00410	MELO3C013738.2	Melon (DHL92) v3.6.1	cpimedB225
CSPI03G00410	CsaV3_3G000430	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G00410	Cla97C10G184940	Watermelon (97103) v2	cpiwmbB184
CSPI03G00410	Bhi11G000238	Wax gourd	cpiwgoB226
CSPI03G00410	Cucsa.322950	Cucumber (Gy14) v1	cgycpiB484
CSPI03G00410	CmaCh06G001420	Cucurbita maxima (Rimu)	cmacpiB840
CSPI03G00410	CmoCh06G001370	Cucurbita moschata (Rifu)	cmocpiB825
CSPI03G00410	Cp4.1LG08g13140	Cucurbita pepo (Zucchini)	cpecpiB853
CSPI03G00410	CsGy3G000380	Cucumber (Gy14) v2	cgybcpiB110
CSPI03G00410	Carg01191	Silver-seed gourd	carcpiB0179

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G00410	Silver-seed gourd	carcpiB0441
CSPI03G00410	Silver-seed gourd	carcpiB0467
CSPI03G00410	Silver-seed gourd	carcpiB0671
CSPI03G00410	Cucumber (Chinese Long) v3	cpicucB184
CSPI03G00410	Watermelon (97103) v2	cpiwmbB182
CSPI03G00410	Wax gourd	cpiwgoB329
CSPI03G00410	Wild cucumber (PI 183967)	cpicpiB133
CSPI03G00410	Cucumber (Gy14) v1	cgycpiB025
CSPI03G00410	Cucurbita maxima (Rimu)	cmacpiB332
CSPI03G00410	Cucurbita maxima (Rimu)	cmacpiB666
CSPI03G00410	Cucurbita maxima (Rimu)	cmacpiB871
CSPI03G00410	Cucurbita moschata (Rifu)	cmocpiB323
CSPI03G00410	Cucurbita moschata (Rifu)	cmocpiB658
CSPI03G00410	Cucurbita moschata (Rifu)	cmocpiB852
CSPI03G00410	Cucumber (Chinese Long) v2	cpicuB156
CSPI03G00410	Melon (DHL92) v3.5.1	cpimeB258
CSPI03G00410	Watermelon (Charleston Gray)	cpiwcgB212
CSPI03G00410	Watermelon (97103) v1	cpiwmB262
CSPI03G00410	Cucurbita pepo (Zucchini)	cpecpiB064
CSPI03G00410	Cucurbita pepo (Zucchini)	cpecpiB215
CSPI03G00410	Cucurbita pepo (Zucchini)	cpecpiB485
CSPI03G00410	Cucurbita pepo (Zucchini)	cpecpiB557
CSPI03G00410	Bottle gourd (USVL1VR-Ls)	cpilsiB164
CSPI03G00410	Melon (DHL92) v3.6.1	cpimedB254
CSPI03G00410	Cucumber (Gy14) v2	cgybcpiB272