Csa2G406060 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa2G406060
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	WRKY transcription factor B; contains IPR003657 (DNA-binding WRKY)
Location	Chr2 : 20956860 .. 20957493 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTATGGACGAGGAGGAGGATGATGAGTTGGAAGAAGAAAGAAGTTTGAAAAAAGTGAAAAGTGAAGAGTCTGGAGGGGAATTGAAGAAGAAGAAGAAGATAAGAAAAAGGAGATTTGCATTTGAAACGAGGAGCCAAGTTGATGTTCTTGATGATGGCTATCGTTGGAGAAAATATGGTCAAAAGGCTGTTAAGAACAACAAGTTTCCCAGGTCCTCATCTTTTAATTATTTATTTCAATTTCTTCTTTCTCAATTCGTTTTTTTGATCAAGCTACTGTTGATTATATATTGAATATGAACTTAAAGGGTATAACTCTCCACAGGGTGAGAAATTCAAATATTTTTTAACGAAGATATATGTCTTAACTAGTTGAGTTATGTTCAAGTTGACATCATCTTAAAATTAAACGATGAGATTTATGAATATATATATATATATATAGGAGCTATTACAAGTGTTCGAATGAAGGCTGCAAAGTGAAGAAGCAAATTCAAAGGCTAACAAATGATGAAGGAGTTGTATTGACAACGTATGAAGGAGTTCATTCCCATCCTATTGAAAAACCTCATGATTCCTTTCAAAATATCTTGACCCATATGCATATTTACCCTTCTTCTTCTTCTTCCTTTTAA

mRNA sequence

ATGGACGAGGAGGAGGATGATGAGTTGGAAGAAGAAAGAAGTTTGAAAAAAGTGAAAAGTGAAGAGTCTGGAGGGGAATTGAAGAAGAAGAAGAAGATAAGAAAAAGGAGATTTGCATTTGAAACGAGGAGCCAAGTTGATGTTCTTGATGATGGCTATCGTTGGAGAAAATATGGTCAAAAGGCTGTTAAGAACAACAAGTTTCCCAGGAGCTATTACAAGTGTTCGAATGAAGGCTGCAAAGTGAAGAAGCAAATTCAAAGGCTAACAAATGATGAAGGAGTTGTATTGACAACGTATGAAGGAGTTCATTCCCATCCTATTGAAAAACCTCATGATTCCTTTCAAAATATCTTGACCCATATGCATATTTACCCTTCTTCTTCTTCTTCCTTTTAA

Coding sequence (CDS)

ATGGACGAGGAGGAGGATGATGAGTTGGAAGAAGAAAGAAGTTTGAAAAAAGTGAAAAGTGAAGAGTCTGGAGGGGAATTGAAGAAGAAGAAGAAGATAAGAAAAAGGAGATTTGCATTTGAAACGAGGAGCCAAGTTGATGTTCTTGATGATGGCTATCGTTGGAGAAAATATGGTCAAAAGGCTGTTAAGAACAACAAGTTTCCCAGGAGCTATTACAAGTGTTCGAATGAAGGCTGCAAAGTGAAGAAGCAAATTCAAAGGCTAACAAATGATGAAGGAGTTGTATTGACAACGTATGAAGGAGTTCATTCCCATCCTATTGAAAAACCTCATGATTCCTTTCAAAATATCTTGACCCATATGCATATTTACCCTTCTTCTTCTTCTTCCTTTTAA

Protein sequence

MDEEEDDELEEERSLKKVKSEESGGELKKKKKIRKRRFAFETRSQVDVLDDGYRWRKYGQKAVKNNKFPRSYYKCSNEGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIEKPHDSFQNILTHMHIYPSSSSSF*

Homology

[Close]

BLAST of Csa2G406060 vs. Swiss-Prot
Match: WRK45_ARATH (Probable WRKY transcription factor 45 OS=Arabidopsis thaliana GN=WRKY45 PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.5e-41
Identity = 76/115 (66.09%), Postives = 91/115 (79.13%), Query Frame = 1


Query: 12  ERSLKKVKSEESGGELKKKKKIRKRRFAFETRSQVDVLDDGYRWRKYGQKAVKNNKFPRS 71
           + S +   S E     KKKKK R+ R+AF+TRSQVD+LDDGYRWRKYGQKAVKNN FPRS
Sbjct: 27  DNSAQPTTSSEEKPRSKKKKKEREARYAFQTRSQVDILDDGYRWRKYGQKAVKNNPFPRS 86

Query: 72  YYKCSNEGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIEKPHDSFQNILTHMHIYP 127
           YYKC+ EGC+VKKQ+QR   DEGVV+TTY+GVH+H ++KP D+F +ILT MHI+P
Sbjct: 87  YYKCTEEGCRVKKQVQRQWGDEGVVVTTYQGVHTHAVDKPSDNFHHILTQMHIFP 141

[Close]

BLAST of Csa2G406060 vs. Swiss-Prot
Match: WRK75_ARATH (Probable WRKY transcription factor 75 OS=Arabidopsis thaliana GN=WRKY75 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 4.8e-40
Identity = 80/125 (64.00%), Postives = 95/125 (76.00%), Query Frame = 1


Query: 3   EEEDDELEEERSLKKVKSEESGGELKKKKKIRKRRFAFETRSQVDVLDDGYRWRKYGQKA 62
           EEE  ++  E   K V+S         KKK +K+R+AF+TRSQVD+LDDGYRWRKYGQKA
Sbjct: 28  EEESSKVRSEGCSKSVESS--------KKKGKKQRYAFQTRSQVDILDDGYRWRKYGQKA 87

Query: 63  VKNNKFPRSYYKCSNEGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIEKPHDSFQNILTHM 122
           VKNNKFPRSYY+C+  GC VKKQ+QRLT D+ VV+TTYEGVHSHPIEK  ++F++ILT M
Sbjct: 88  VKNNKFPRSYYRCTYGGCNVKKQVQRLTVDQEVVVTTYEGVHSHPIEKSTENFEHILTQM 144

Query: 123 HIYPS 128
            IY S
Sbjct: 148 QIYSS 144

[Close]

BLAST of Csa2G406060 vs. Swiss-Prot
Match: WRK24_ARATH (Probable WRKY transcription factor 24 OS=Arabidopsis thaliana GN=WRKY24 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.2e-29
Identity = 61/109 (55.96%), Postives = 74/109 (67.89%), Query Frame = 1


Query: 22  ESGGELKKKKKIRKRRFAFETRSQVDVLDDGYRWRKYGQKAVKNNKFPRSYYKCSNEGCK 81
           E G ELK+K+  +  R AF TRS  DVLDDGYRWRKYGQK+VK+N  PRSYY+C+   C 
Sbjct: 70  EKGKELKEKRSRKVPRIAFHTRSDDDVLDDGYRWRKYGQKSVKHNAHPRSYYRCTYHTCN 129

Query: 82  VKKQIQRLTNDEGVVLTTYEGVHSHPIEKPHDSFQNILTHMHIYPSSSS 131
           VKKQ+QRL  D  VV+TTYEGVH+HP EK  ++   +L  +    S S+
Sbjct: 130 VKKQVQRLAKDPNVVVTTYEGVHNHPCEKLMETLNPLLRQLQFLSSFSN 178

[Close]

BLAST of Csa2G406060 vs. Swiss-Prot
Match: WRK48_ARATH (Probable WRKY transcription factor 48 OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.9e-28
Identity = 57/107 (53.27%), Postives = 81/107 (75.70%), Query Frame = 1


Query: 2   DEEEDDELEEERSLK-KVKSEESGGELKKKKKIRKRRFAFETRSQVDVLDDGYRWRKYGQ 61
           D+EE D+ +E++  K ++K+++     K +KK R+ RFAF T+S +D LDDGYRWRKYGQ
Sbjct: 177 DQEEGDQQQEQKGTKPQLKAKK-----KNQKKAREARFAFLTKSDIDNLDDGYRWRKYGQ 236

Query: 62  KAVKNNKFPRSYYKCSNEGCKVKKQIQRLTNDEGVVLTTYEGVHSHP 108
           KAVKN+ +PRSYY+C+  GC VKK+++R ++D  +V+TTYEG H+HP
Sbjct: 237 KAVKNSPYPRSYYRCTTVGCGVKKRVERSSDDPSIVMTTYEGQHTHP 278

[Close]

BLAST of Csa2G406060 vs. Swiss-Prot
Match: WRK56_ARATH (Probable WRKY transcription factor 56 OS=Arabidopsis thaliana GN=WRKY56 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.6e-27
Identity = 56/95 (58.95%), Postives = 67/95 (70.53%), Query Frame = 1


Query: 28  KKKKKIRKRRFAFETRSQVDVLDDGYRWRKYGQKAVKNNKFPRSYYKCSNEGCKVKKQIQ 87
           K K+ +  +R AF TRS  DVLDDGYRWRKYGQK+VKNN  PRSYY+C+   C VKKQ+Q
Sbjct: 92  KGKRTLAMQRIAFHTRSDDDVLDDGYRWRKYGQKSVKNNAHPRSYYRCTYHTCNVKKQVQ 151

Query: 88  RLTNDEGVVLTTYEGVHSHPIEKPHDSFQNILTHM 123
           RL  D  VV+TTYEGVH+HP EK  ++   +L  +
Sbjct: 152 RLAKDPNVVVTTYEGVHNHPCEKLMETLSPLLRQL 186

[Close]

BLAST of Csa2G406060 vs. TrEMBL
Match: A0A0A0LT01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G406060 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.1e-70
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 1


Query: 1   MDEEEDDELEEERSLKKVKSEESGGELKKKKKIRKRRFAFETRSQVDVLDDGYRWRKYGQ 60
           MDEEEDDELEEERSLKKVKSEESGGELKKKKKIRKRRFAFETRSQVDVLDDGYRWRKYGQ
Sbjct: 1   MDEEEDDELEEERSLKKVKSEESGGELKKKKKIRKRRFAFETRSQVDVLDDGYRWRKYGQ 60

Query: 61  KAVKNNKFPRSYYKCSNEGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIEKPHDSFQNILT 120
           KAVKNNKFPRSYYKCSNEGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIEKPHDSFQNILT
Sbjct: 61  KAVKNNKFPRSYYKCSNEGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIEKPHDSFQNILT 120

Query: 121 HMHIYPSSSSSF 133
           HMHIYPSSSSSF
Sbjct: 121 HMHIYPSSSSSF 132

[Close]

BLAST of Csa2G406060 vs. TrEMBL
Match: A0A0A0KU50_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G012390 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.1e-42
Identity = 84/119 (70.59%), Postives = 101/119 (84.87%), Query Frame = 1


Query: 12  ERSLKKVKSEESGG--ELKKKKKIRKRRFAFETRSQVDVLDDGYRWRKYGQKAVKNNKFP 71
           E  LKK + E  G   +  KKKK+R RRFAF+TRSQVD+LDDGYRWRKYGQKAVKNNKFP
Sbjct: 96  EYGLKKEEGEGRGRGEDCDKKKKMRNRRFAFQTRSQVDILDDGYRWRKYGQKAVKNNKFP 155

Query: 72  RSYYKCSNEGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIEKPHDSFQNILTHMHIYPSS 129
           RSYY+C+++GCKVKKQ+QRLT DEGVV+TTYEG+HSHPIEK  D+F++IL+ M IY +S
Sbjct: 156 RSYYRCTHQGCKVKKQVQRLTRDEGVVVTTYEGIHSHPIEKSTDNFEHILSQMQIYTTS 214

[Close]

BLAST of Csa2G406060 vs. TrEMBL
Match: R0I4U4_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10016335mg PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.8e-41
Identity = 76/111 (68.47%), Postives = 97/111 (87.39%), Query Frame = 1


Query: 16  KKVKSEESGGELKKKKKIRKRRFAFETRSQVDVLDDGYRWRKYGQKAVKNNKFPRSYYKC 75
           +K+K++E G    +KKK R+ +FAF+TRSQVD+LDDGYRWRKYGQKAVKNN FPRSYYKC
Sbjct: 37  QKMKNKEEGKPKSRKKKEREAKFAFQTRSQVDILDDGYRWRKYGQKAVKNNLFPRSYYKC 96

Query: 76  SNEGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIEKPHDSFQNILTHMHIYP 127
           + EGC+VKKQ+QRL+ DEGVV+TTY+G H+HP++KP D+F +ILT MHI+P
Sbjct: 97  TQEGCRVKKQVQRLSGDEGVVVTTYQGAHTHPVDKPSDNFHHILTQMHIFP 147

[Close]

BLAST of Csa2G406060 vs. TrEMBL
Match: A0A140H8M3_MANES (WRKY transcription factor 19 OS=Manihot esculenta PE=2 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 5.1e-41
Identity = 81/121 (66.94%), Postives = 102/121 (84.30%), Query Frame = 1


Query: 8   ELEEERSLKKVKSEESGGELKKKKKIRKRRFAFETRSQVDVLDDGYRWRKYGQKAVKNNK 67
           E EEE+ L  +K +++       KKIRK R+AF+TRSQVD+LDDGYRWRKYGQKAVKNNK
Sbjct: 78  ENEEEKLLLGMKKKDTA------KKIRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNK 137

Query: 68  FPRSYYKCSNEGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIEKPHDSFQNILTHMHIYPS 127
           FPRSYY+C+++GC VKKQ+QRLT DEG+V+TTYEG+HSHPIEK +D+F++ILT M IY +
Sbjct: 138 FPRSYYRCTHQGCNVKKQVQRLTRDEGIVVTTYEGMHSHPIEKSNDNFEHILTQMQIYTT 192

Query: 128 S 129
           S
Sbjct: 198 S 192

[Close]

BLAST of Csa2G406060 vs. TrEMBL
Match: A0A087H6A0_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G010900 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 6.7e-41
Identity = 77/107 (71.96%), Postives = 93/107 (86.92%), Query Frame = 1


Query: 21  EESGGELKKKKKIRKRRFAFETRSQVDVLDDGYRWRKYGQKAVKNNKFPRSYYKCSNEGC 80
           EE      +KKK R+ RFAF+TRSQVD+LDDGYRWRKYGQKAVKNN FPRSYYKC+ EGC
Sbjct: 37  EEEEKHKSRKKKEREPRFAFQTRSQVDILDDGYRWRKYGQKAVKNNPFPRSYYKCTQEGC 96

Query: 81  KVKKQIQRLTNDEGVVLTTYEGVHSHPIEKPHDSFQNILTHMHIYPS 128
           +VKKQ+QRL+ DEGVV+TTY+GVH+HP++KP D+F +ILT MHI+PS
Sbjct: 97  RVKKQVQRLSGDEGVVVTTYQGVHTHPVDKPSDNFHHILTQMHIFPS 143

[Close]

BLAST of Csa2G406060 vs. TAIR10
Match: AT3G01970.1 (AT3G01970.1 WRKY DNA-binding protein 45)

HSP 1 Score: 170.2 bits (430), Expect = 8.3e-43
Identity = 76/115 (66.09%), Postives = 91/115 (79.13%), Query Frame = 1


Query: 12  ERSLKKVKSEESGGELKKKKKIRKRRFAFETRSQVDVLDDGYRWRKYGQKAVKNNKFPRS 71
           + S +   S E     KKKKK R+ R+AF+TRSQVD+LDDGYRWRKYGQKAVKNN FPRS
Sbjct: 27  DNSAQPTTSSEEKPRSKKKKKEREARYAFQTRSQVDILDDGYRWRKYGQKAVKNNPFPRS 86

Query: 72  YYKCSNEGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIEKPHDSFQNILTHMHIYP 127
           YYKC+ EGC+VKKQ+QR   DEGVV+TTY+GVH+H ++KP D+F +ILT MHI+P
Sbjct: 87  YYKCTEEGCRVKKQVQRQWGDEGVVVTTYQGVHTHAVDKPSDNFHHILTQMHIFP 141

[Close]

BLAST of Csa2G406060 vs. TAIR10
Match: AT5G13080.1 (AT5G13080.1 WRKY DNA-binding protein 75)

HSP 1 Score: 165.2 bits (417), Expect = 2.7e-41
Identity = 80/125 (64.00%), Postives = 95/125 (76.00%), Query Frame = 1


Query: 3   EEEDDELEEERSLKKVKSEESGGELKKKKKIRKRRFAFETRSQVDVLDDGYRWRKYGQKA 62
           EEE  ++  E   K V+S         KKK +K+R+AF+TRSQVD+LDDGYRWRKYGQKA
Sbjct: 28  EEESSKVRSEGCSKSVESS--------KKKGKKQRYAFQTRSQVDILDDGYRWRKYGQKA 87

Query: 63  VKNNKFPRSYYKCSNEGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIEKPHDSFQNILTHM 122
           VKNNKFPRSYY+C+  GC VKKQ+QRLT D+ VV+TTYEGVHSHPIEK  ++F++ILT M
Sbjct: 88  VKNNKFPRSYYRCTYGGCNVKKQVQRLTVDQEVVVTTYEGVHSHPIEKSTENFEHILTQM 144

Query: 123 HIYPS 128
            IY S
Sbjct: 148 QIYSS 144

[Close]

BLAST of Csa2G406060 vs. TAIR10
Match: AT5G41570.1 (AT5G41570.1 WRKY DNA-binding protein 24)

HSP 1 Score: 129.8 bits (325), Expect = 1.2e-30
Identity = 61/109 (55.96%), Postives = 74/109 (67.89%), Query Frame = 1


Query: 22  ESGGELKKKKKIRKRRFAFETRSQVDVLDDGYRWRKYGQKAVKNNKFPRSYYKCSNEGCK 81
           E G ELK+K+  +  R AF TRS  DVLDDGYRWRKYGQK+VK+N  PRSYY+C+   C 
Sbjct: 70  EKGKELKEKRSRKVPRIAFHTRSDDDVLDDGYRWRKYGQKSVKHNAHPRSYYRCTYHTCN 129

Query: 82  VKKQIQRLTNDEGVVLTTYEGVHSHPIEKPHDSFQNILTHMHIYPSSSS 131
           VKKQ+QRL  D  VV+TTYEGVH+HP EK  ++   +L  +    S S+
Sbjct: 130 VKKQVQRLAKDPNVVVTTYEGVHNHPCEKLMETLNPLLRQLQFLSSFSN 178

[Close]

BLAST of Csa2G406060 vs. TAIR10
Match: AT5G49520.1 (AT5G49520.1 WRKY DNA-binding protein 48)

HSP 1 Score: 126.7 bits (317), Expect = 1.1e-29
Identity = 57/107 (53.27%), Postives = 81/107 (75.70%), Query Frame = 1


Query: 2   DEEEDDELEEERSLK-KVKSEESGGELKKKKKIRKRRFAFETRSQVDVLDDGYRWRKYGQ 61
           D+EE D+ +E++  K ++K+++     K +KK R+ RFAF T+S +D LDDGYRWRKYGQ
Sbjct: 177 DQEEGDQQQEQKGTKPQLKAKK-----KNQKKAREARFAFLTKSDIDNLDDGYRWRKYGQ 236

Query: 62  KAVKNNKFPRSYYKCSNEGCKVKKQIQRLTNDEGVVLTTYEGVHSHP 108
           KAVKN+ +PRSYY+C+  GC VKK+++R ++D  +V+TTYEG H+HP
Sbjct: 237 KAVKNSPYPRSYYRCTTVGCGVKKRVERSSDDPSIVMTTYEGQHTHP 278

[Close]

BLAST of Csa2G406060 vs. TAIR10
Match: AT1G64000.1 (AT1G64000.1 WRKY DNA-binding protein 56)

HSP 1 Score: 123.6 bits (309), Expect = 8.9e-29
Identity = 56/95 (58.95%), Postives = 67/95 (70.53%), Query Frame = 1


Query: 28  KKKKKIRKRRFAFETRSQVDVLDDGYRWRKYGQKAVKNNKFPRSYYKCSNEGCKVKKQIQ 87
           K K+ +  +R AF TRS  DVLDDGYRWRKYGQK+VKNN  PRSYY+C+   C VKKQ+Q
Sbjct: 92  KGKRTLAMQRIAFHTRSDDDVLDDGYRWRKYGQKSVKNNAHPRSYYRCTYHTCNVKKQVQ 151

Query: 88  RLTNDEGVVLTTYEGVHSHPIEKPHDSFQNILTHM 123
           RL  D  VV+TTYEGVH+HP EK  ++   +L  +
Sbjct: 152 RLAKDPNVVVTTYEGVHNHPCEKLMETLSPLLRQL 186

[Close]

BLAST of Csa2G406060 vs. NCBI nr
Match: gi|778673213|ref|XP_004138624.2| (PREDICTED: probable WRKY transcription factor 45 [Cucumis sativus])

HSP 1 Score: 273.9 bits (699), Expect = 1.5e-70
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 1


Query: 1   MDEEEDDELEEERSLKKVKSEESGGELKKKKKIRKRRFAFETRSQVDVLDDGYRWRKYGQ 60
           MDEEEDDELEEERSLKKVKSEESGGELKKKKKIRKRRFAFETRSQVDVLDDGYRWRKYGQ
Sbjct: 1   MDEEEDDELEEERSLKKVKSEESGGELKKKKKIRKRRFAFETRSQVDVLDDGYRWRKYGQ 60

Query: 61  KAVKNNKFPRSYYKCSNEGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIEKPHDSFQNILT 120
           KAVKNNKFPRSYYKCSNEGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIEKPHDSFQNILT
Sbjct: 61  KAVKNNKFPRSYYKCSNEGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIEKPHDSFQNILT 120

Query: 121 HMHIYPSSSSSF 133
           HMHIYPSSSSSF
Sbjct: 121 HMHIYPSSSSSF 132

[Close]

BLAST of Csa2G406060 vs. NCBI nr
Match: gi|659081408|ref|XP_008441319.1| (PREDICTED: probable WRKY transcription factor 75 [Cucumis melo])

HSP 1 Score: 233.0 bits (593), Expect = 3.0e-58
Identity = 113/125 (90.40%), Postives = 117/125 (93.60%), Query Frame = 1


Query: 3   EEEDDELEEERSLKKVKSEESGGELKKKKKIRKRRFAFETRSQVDVLDDGYRWRKYGQKA 62
           ++ DDELEEE SLKK+KSE SGG+L KKKK RKRRFAFETRSQVDVLDDGYRWRKYGQKA
Sbjct: 24  DDHDDELEEESSLKKIKSEVSGGKL-KKKKTRKRRFAFETRSQVDVLDDGYRWRKYGQKA 83

Query: 63  VKNNKFPRSYYKCSNEGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIEKPHDSFQNILTHM 122
           VKNNKFPRSYYKCSNEGCKVKKQIQRLT DE VVLTTYEGVHSHPIEKPHDSFQNILTHM
Sbjct: 84  VKNNKFPRSYYKCSNEGCKVKKQIQRLTKDEEVVLTTYEGVHSHPIEKPHDSFQNILTHM 143

Query: 123 HIYPS 128
           HIY S
Sbjct: 144 HIYSS 147

[Close]

BLAST of Csa2G406060 vs. NCBI nr
Match: gi|659108093|ref|XP_008454014.1| (PREDICTED: probable WRKY transcription factor 48 [Cucumis melo])

HSP 1 Score: 183.3 bits (464), Expect = 2.7e-43
Identity = 84/120 (70.00%), Postives = 100/120 (83.33%), Query Frame = 1


Query: 8   ELEEERSLKKVKSEESGGELKKKKKIRKRRFAFETRSQVDVLDDGYRWRKYGQKAVKNNK 67
           E E E     +  E  GG+  KKKK+R RRFAF+TRSQVD+LDDGYRWRKYGQKAVKNNK
Sbjct: 100 EEEGEVRAGAMMGERGGGDCDKKKKMRSRRFAFQTRSQVDILDDGYRWRKYGQKAVKNNK 159

Query: 68  FPRSYYKCSNEGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIEKPHDSFQNILTHMHIYPS 127
           FPRSYY+C+++GCKVKKQ+QRLT DEGVV+TTYEG+HSHPIEK  D+F++IL+ M IY S
Sbjct: 160 FPRSYYRCTHQGCKVKKQVQRLTRDEGVVVTTYEGIHSHPIEKSTDNFEHILSQMQIYTS 219

[Close]

BLAST of Csa2G406060 vs. NCBI nr
Match: gi|778689952|ref|XP_004152302.2| (PREDICTED: probable WRKY transcription factor 75 [Cucumis sativus])

HSP 1 Score: 179.9 bits (455), Expect = 3.0e-42
Identity = 84/119 (70.59%), Postives = 101/119 (84.87%), Query Frame = 1


Query: 12  ERSLKKVKSEESGG--ELKKKKKIRKRRFAFETRSQVDVLDDGYRWRKYGQKAVKNNKFP 71
           E  LKK + E  G   +  KKKK+R RRFAF+TRSQVD+LDDGYRWRKYGQKAVKNNKFP
Sbjct: 96  EYGLKKEEGEGRGRGEDCDKKKKMRNRRFAFQTRSQVDILDDGYRWRKYGQKAVKNNKFP 155

Query: 72  RSYYKCSNEGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIEKPHDSFQNILTHMHIYPSS 129
           RSYY+C+++GCKVKKQ+QRLT DEGVV+TTYEG+HSHPIEK  D+F++IL+ M IY +S
Sbjct: 156 RSYYRCTHQGCKVKKQVQRLTRDEGVVVTTYEGIHSHPIEKSTDNFEHILSQMQIYTTS 214

[Close]

BLAST of Csa2G406060 vs. NCBI nr
Match: gi|729292816|ref|XP_010531035.1| (PREDICTED: probable WRKY transcription factor 75 [Tarenaya hassleriana])

HSP 1 Score: 178.3 bits (451), Expect = 8.7e-42
Identity = 81/125 (64.80%), Postives = 103/125 (82.40%), Query Frame = 1


Query: 3   EEEDDELEEERSLKKVKSEESGGELKKKKKIRKRRFAFETRSQVDVLDDGYRWRKYGQKA 62
           +++DDE   +   K V+      ++KKKKK+R+ R+AF+TRSQVD+LDDGYRWRKYGQK+
Sbjct: 32  DDDDDEDHYDDGTKVVEEPRRFLKMKKKKKVREHRYAFQTRSQVDILDDGYRWRKYGQKS 91

Query: 63  VKNNKFPRSYYKCSNEGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIEKPHDSFQNILTHM 122
           VKNNKFPRSYY+C+ +GC VKKQ+QRL+ DEGVV+TTYEGVHSHPIEK  D+F++ILT M
Sbjct: 92  VKNNKFPRSYYRCTFKGCNVKKQVQRLSTDEGVVVTTYEGVHSHPIEKSTDNFEHILTQM 151

Query: 123 HIYPS 128
            IY S
Sbjct: 152 QIYAS 156

The following BLAST results are available for this feature:

BLAST of Csa2G406060 vs. Swiss-Prot


Match Name	E-value	Identity	Description
WRK45_ARATH	1.5e-41	66.09	Probable WRKY transcription factor 45 OS=Arabidopsis thaliana GN=WRKY45 PE=2 SV=...	[more]
WRK75_ARATH	4.8e-40	64.00	Probable WRKY transcription factor 75 OS=Arabidopsis thaliana GN=WRKY75 PE=2 SV=...	[more]
WRK24_ARATH	2.2e-29	55.96	Probable WRKY transcription factor 24 OS=Arabidopsis thaliana GN=WRKY24 PE=2 SV=...	[more]
WRK48_ARATH	1.9e-28	53.27	Probable WRKY transcription factor 48 OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=...	[more]
WRK56_ARATH	1.6e-27	58.95	Probable WRKY transcription factor 56 OS=Arabidopsis thaliana GN=WRKY56 PE=2 SV=...	[more]

BLAST of Csa2G406060 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT01_CUCSA	1.1e-70	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G406060 PE=4 SV=1	[more]
A0A0A0KU50_CUCSA	2.1e-42	70.59	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G012390 PE=4 SV=1	[more]
R0I4U4_9BRAS	1.8e-41	68.47	Uncharacterized protein OS=Capsella rubella GN=CARUB_v10016335mg PE=4 SV=1	[more]
A0A140H8M3_MANES	5.1e-41	66.94	WRKY transcription factor 19 OS=Manihot esculenta PE=2 SV=1	[more]
A0A087H6A0_ARAAL	6.7e-41	71.96	Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G010900 PE=4 SV=1	[more]

BLAST of Csa2G406060 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G01970.1	8.3e-43	66.09	WRKY DNA-binding protein 45	[more]
AT5G13080.1	2.7e-41	64.00	WRKY DNA-binding protein 75	[more]
AT5G41570.1	1.2e-30	55.96	WRKY DNA-binding protein 24	[more]
AT5G49520.1	1.1e-29	53.27	WRKY DNA-binding protein 48	[more]
AT1G64000.1	8.9e-29	58.95	WRKY DNA-binding protein 56	[more]

BLAST of Csa2G406060 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778673213\|ref\|XP_004138624.2\|	1.5e-70	100.00	PREDICTED: probable WRKY transcription factor 45 [Cucumis sativus]	[more]
gi\|659081408\|ref\|XP_008441319.1\|	3.0e-58	90.40	PREDICTED: probable WRKY transcription factor 75 [Cucumis melo]	[more]
gi\|659108093\|ref\|XP_008454014.1\|	2.7e-43	70.00	PREDICTED: probable WRKY transcription factor 48 [Cucumis melo]	[more]
gi\|778689952\|ref\|XP_004152302.2\|	3.0e-42	70.59	PREDICTED: probable WRKY transcription factor 75 [Cucumis sativus]	[more]
gi\|729292816\|ref\|XP_010531035.1\|	8.7e-42	64.80	PREDICTED: probable WRKY transcription factor 75 [Tarenaya hassleriana]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003657	WRKY_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0043565	sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa2G406060.1	Csa2G406060.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003657	WRKY domain	GENE3D	G3DSA:2.20.25.80		coord: 34..107 score: 5.7
IPR003657	WRKY domain	PFAM	PF03106	WRKY	coord: 50..107 score: 6.4
IPR003657	WRKY domain	SMART	SM00774	WRKY_cls	coord: 49..108 score: 2.9
IPR003657	WRKY domain	PROFILE	PS50811	WRKY	coord: 44..109 score: 29
IPR003657	WRKY domain	unknown	SSF118290	WRKY DNA-binding domain	coord: 42..108 score: 2.22
None	No IPR available	unknown	Coil	Coil	coord: 1..21 scor
None	No IPR available	PANTHER	PTHR31221	FAMILY NOT NAMED	coord: 28..132 score: 4.7
None	No IPR available	PANTHER	PTHR31221:SF25	WRKY TRANSCRIPTION FACTOR 45-RELATED	coord: 28..132 score: 4.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa2G406060	Cla003370	Watermelon (97103) v1	cuwmB160
Csa2G406060	MELO3C008175	Melon (DHL92) v3.5.1	cumeB115
Csa2G406060	ClCG11G009430	Watermelon (Charleston Gray)	cuwcgB098
Csa2G406060	Lsi03G004080	Bottle gourd (USVL1VR-Ls)	culsiB115
Csa2G406060	MELO3C008175.2	Melon (DHL92) v3.6.1	cumedB112
Csa2G406060	CSPI02G25500	Wild cucumber (PI 183967)	cpicuB065
Csa2G406060	Cucsa.087850	Cucumber (Gy14) v1	cgycuB090

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa2G406060	Wax gourd	cuwgoB164
Csa2G406060	Cucurbita maxima (Rimu)	cmacuB277
Csa2G406060	Cucurbita maxima (Rimu)	cmacuB694
Csa2G406060	Cucurbita moschata (Rifu)	cmocuB264
Csa2G406060	Cucurbita moschata (Rifu)	cmocuB684
Csa2G406060	Cucurbita pepo (Zucchini)	cpecuB167
Csa2G406060	Cucurbita pepo (Zucchini)	cpecuB386
Csa2G406060	Cucumber (Gy14) v2	cgybcuB057
Csa2G406060	Silver-seed gourd	carcuB0018
Csa2G406060	Silver-seed gourd	carcuB1024
Csa2G406060	Watermelon (97103) v2	cuwmbB114