ClCG11G009430 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG11G009430
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	WRKY protein
Location	CG_Chr11 : 15375993 .. 15377261 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAGATAATTATGGATAATAATTACCAAATATTCTTCCCAGCTTCCTCCTCCTCCCATAATTCACTGCCAACTACGCCCATGGATCATCAGTTCCAAGAAGAAAGTAGTGTGAAAAAAACAAGTAGTGGATCTATGAAATCGGAGAAGAAGATAAGAAAAGGGAGATTTGCGTTTGAAACCAGGAGCCAAGTTGATGTGCTTGACGATGGCTATCGCTGGAGAAAATATGGTCAAAAGGCTGTTAAGAACGACAAGTTTCCCAGGTTTATTATTTATTCTTCCTTTGTGTTTTCTTTCTCCAAATCATTTCTGTATATATATATACATAGCATGTTCTTCCCTCCCCTCAATTCTAGACGGTTAACGTACTTAAATGATTCTAAATTTAATGAGACATCTTGAAAATATGAAAGTATGATTAAATTAAAAAAGGTTTCAGAGAATTTGATAATTATTACCTATACCAAAGGGTGGCCCAACCATATAAAAACTCCAAAGTTAAGTGTGTTTGAAACATGGTAAAAGGATGTAGATTTCTTTGCTAAGATAGAGAGATGCGAGGGAATATCGAAGTCATCAAGTGTCAAATTTGAATTTTCAGTTTTAGTATCAAGCGTTACCATTGTTTAACATAATATCATAATTTGCTTTTGAAATTGAATAAAATTAAATAGGTTGTAGTGGAGTGAATTTTGTGAGCTAGGTTGTAGTGGAGTGACTTTTGTGGTTATGCTCACATTATTGAAATATATAACTAAATTTAGTGGTTTTATATGTATGAAATCAAGATTTTTTGTGTTCAAATTCTAATTTCATCTTCTCTTCAATTAATATCATTTAGGATAAGAAATTTAAGTCTCTTAATTGAAGATATATGTTTTAATCAGTTAAACTATATTTAAGTTGATACTTCACCTTAAATTTTTGGAGAGATTGAATATAAACCATCTGGAATGCTTAATCGATTGAGTTATGAATGTTGTAGGAGCTACTATAAGTGTTCACATCAAGGATGTAAAGTGAAGAAGCAAATTCAACGGCTTACAAATGATGAAGGAGTGGTATTAACAACCTACGAAGGAGTTCATTCCCATCCCATCGAAACCCCTCAAGATAACTTTCAACATATCTTGACTCACATGCAAATTTACCCTTCTTCCTTTTAAAACCTCTATTTCACTTTAATTTCTTTTTTGCTTTTTTCACATTACACTTTTCAATTTTTATTATCAACTTCAATACCTCATTTCTTTGTCTATATAATAAG

mRNA sequence

CTCAGATAATTATGGATAATAATTACCAAATATTCTTCCCAGCTTCCTCCTCCTCCCATAATTCACTGCCAACTACGCCCATGGATCATCAGTTCCAAGAAGAAAGTAGTGTGAAAAAAACAAGTAGTGGATCTATGAAATCGGAGAAGAAGATAAGAAAAGGGAGATTTGCGTTTGAAACCAGGAGCCAAGTTGATGTGCTTGACGATGGCTATCGCTGGAGAAAATATGGTCAAAAGGCTGTTAAGAACGACAAGTTTCCCAGGAGCTACTATAAGTGTTCACATCAAGGATGTAAAGTGAAGAAGCAAATTCAACGGCTTACAAATGATGAAGGAGTGGTATTAACAACCTACGAAGGAGTTCATTCCCATCCCATCGAAACCCCTCAAGATAACTTTCAACATATCTTGACTCACATGCAAATTTACCCTTCTTCCTTTTAAAACCTCTATTTCACTTTAATTTCTTTTTTGCTTTTTTCACATTACACTTTTCAATTTTTATTATCAACTTCAATACCTCATTTCTTTGTCTATATAATAAG

Coding sequence (CDS)

ATGGATAATAATTACCAAATATTCTTCCCAGCTTCCTCCTCCTCCCATAATTCACTGCCAACTACGCCCATGGATCATCAGTTCCAAGAAGAAAGTAGTGTGAAAAAAACAAGTAGTGGATCTATGAAATCGGAGAAGAAGATAAGAAAAGGGAGATTTGCGTTTGAAACCAGGAGCCAAGTTGATGTGCTTGACGATGGCTATCGCTGGAGAAAATATGGTCAAAAGGCTGTTAAGAACGACAAGTTTCCCAGGAGCTACTATAAGTGTTCACATCAAGGATGTAAAGTGAAGAAGCAAATTCAACGGCTTACAAATGATGAAGGAGTGGTATTAACAACCTACGAAGGAGTTCATTCCCATCCCATCGAAACCCCTCAAGATAACTTTCAACATATCTTGACTCACATGCAAATTTACCCTTCTTCCTTTTAA

Protein sequence

MDNNYQIFFPASSSSHNSLPTTPMDHQFQEESSVKKTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHILTHMQIYPSSF

Homology

[Close]

BLAST of ClCG11G009430 vs. Swiss-Prot
Match: WRK75_ARATH (Probable WRKY transcription factor 75 OS=Arabidopsis thaliana GN=WRKY75 PE=2 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 3.2e-42
Identity = 89/144 (61.81%), Postives = 106/144 (73.61%), Query Frame = 1


Query: 3   NNYQIFFPASSSSHNSLPTTPMDHQFQEESSVKKTSSGSMKS----EKKIRKGRFAFETR 62
           +N  ++ P  S   +S P     HQ +EESS K  S G  KS    +KK +K R+AF+TR
Sbjct: 5   DNGSLYAPFLSLKSHSKPEL---HQGEEESS-KVRSEGCSKSVESSKKKGKKQRYAFQTR 64

Query: 63  SQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGV 122
           SQVD+LDDGYRWRKYGQKAVKN+KFPRSYY+C++ GC VKKQ+QRLT D+ VV+TTYEGV
Sbjct: 65  SQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTYGGCNVKKQVQRLTVDQEVVVTTYEGV 124

Query: 123 HSHPIETPQDNFQHILTHMQIYPS 143
           HSHPIE   +NF+HILT MQIY S
Sbjct: 125 HSHPIEKSTENFEHILTQMQIYSS 144

[Close]

BLAST of ClCG11G009430 vs. Swiss-Prot
Match: WRK45_ARATH (Probable WRKY transcription factor 45 OS=Arabidopsis thaliana GN=WRKY45 PE=2 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 6.7e-40
Identity = 79/141 (56.03%), Postives = 99/141 (70.21%), Query Frame = 1


Query: 2   DNNYQIFFPASSSSHNSLPTTP-MDHQFQEESSVKKTSSGSMKSEKKIRKGRFAFETRSQ 61
           D    + FP SSS    L     +D+  Q  +S ++      K +KK R+ R+AF+TRSQ
Sbjct: 3   DRRCDVLFPCSSSVDPRLTEFHGVDNSAQPTTSSEEKPRS--KKKKKEREARYAFQTRSQ 62

Query: 62  VDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHS 121
           VD+LDDGYRWRKYGQKAVKN+ FPRSYYKC+ +GC+VKKQ+QR   DEGVV+TTY+GVH+
Sbjct: 63  VDILDDGYRWRKYGQKAVKNNPFPRSYYKCTEEGCRVKKQVQRQWGDEGVVVTTYQGVHT 122

Query: 122 HPIETPQDNFQHILTHMQIYP 142
           H ++ P DNF HILT M I+P
Sbjct: 123 HAVDKPSDNFHHILTQMHIFP 141

[Close]

BLAST of ClCG11G009430 vs. Swiss-Prot
Match: WRK48_ARATH (Probable WRKY transcription factor 48 OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.0e-27
Identity = 54/96 (56.25%), Postives = 69/96 (71.88%), Query Frame = 1


Query: 27  QFQEESSVKKTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRS 86
           Q QE+   K       K++KK R+ RFAF T+S +D LDDGYRWRKYGQKAVKN  +PRS
Sbjct: 183 QQQEQKGTKPQLKAKKKNQKKAREARFAFLTKSDIDNLDDGYRWRKYGQKAVKNSPYPRS 242

Query: 87  YYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSHP 123
           YY+C+  GC VKK+++R ++D  +V+TTYEG H+HP
Sbjct: 243 YYRCTTVGCGVKKRVERSSDDPSIVMTTYEGQHTHP 278

[Close]

BLAST of ClCG11G009430 vs. Swiss-Prot
Match: WRK71_ARATH (Probable WRKY transcription factor 71 OS=Arabidopsis thaliana GN=WRKY71 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.3e-27
Identity = 58/109 (53.21%), Postives = 74/109 (67.89%), Query Frame = 1


Query: 31  ESSVKKTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKC 90
           ESS + T  G  K EKK R+ R AF T+S++D L+DGYRWRKYGQKAVKN  +PRSYY+C
Sbjct: 102 ESSKQLTKQGKKKGEKKEREVRVAFMTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRC 161

Query: 91  SHQGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIETPQDN---FQHILTH 137
           + Q C VKK+++R   D  +V+TTYEG H+HPI +        +H+L H
Sbjct: 162 TTQKCNVKKRVERSFQDPSIVITTYEGKHNHPIPSTLRGTVAAEHLLVH 210

[Close]

BLAST of ClCG11G009430 vs. Swiss-Prot
Match: WRK24_ARATH (Probable WRKY transcription factor 24 OS=Arabidopsis thaliana GN=WRKY24 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.8e-27
Identity = 65/136 (47.79%), Postives = 81/136 (59.56%), Query Frame = 1


Query: 8   FFPASSSSHNSLPTTPMDHQFQEESSVKKTSSGSMKSEKKIRK-GRFAFETRSQVDVLDD 67
           ++P S   H + P  P + Q  E+        G    EK+ RK  R AF TRS  DVLDD
Sbjct: 49  WYPESFHVH-APPLPPENDQIGEK--------GKELKEKRSRKVPRIAFHTRSDDDVLDD 108

Query: 68  GYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIETP 127
           GYRWRKYGQK+VK++  PRSYY+C++  C VKKQ+QRL  D  VV+TTYEGVH+HP E  
Sbjct: 109 GYRWRKYGQKSVKHNAHPRSYYRCTYHTCNVKKQVQRLAKDPNVVVTTYEGVHNHPCEKL 168

Query: 128 QDNFQHILTHMQIYPS 143
            +    +L  +Q   S
Sbjct: 169 METLNPLLRQLQFLSS 175

[Close]

BLAST of ClCG11G009430 vs. TrEMBL
Match: A0A0A0LT01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G406060 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 8.5e-50
Identity = 98/123 (79.67%), Postives = 108/123 (87.80%), Query Frame = 1


Query: 25  DHQFQEESSVKKTSS----GSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKN 84
           D + +EE S+KK  S    G +K +KKIRK RFAFETRSQVDVLDDGYRWRKYGQKAVKN
Sbjct: 6   DDELEEERSLKKVKSEESGGELKKKKKIRKRRFAFETRSQVDVLDDGYRWRKYGQKAVKN 65

Query: 85  DKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHILTHMQIY 144
           +KFPRSYYKCS++GCKVKKQIQRLTNDEGVVLTTYEGVHSHPIE P D+FQ+ILTHM IY
Sbjct: 66  NKFPRSYYKCSNEGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIEKPHDSFQNILTHMHIY 125

[Close]

BLAST of ClCG11G009430 vs. TrEMBL
Match: I3SNS6_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 2.8e-45
Identity = 93/154 (60.39%), Postives = 107/154 (69.48%), Query Frame = 1


Query: 2   DNNYQIFFPASSSS-------HNSLPTTPMDHQFQEES--------SVKKTSSGSMKSEK 61
           +NNY + FP  SSS       HN       DHQF++          S    S    K EK
Sbjct: 4   NNNYSMLFPCPSSSTSVVGSSHNGYSGLNNDHQFEKRVEDARDGILSQINVSDNKKKGEK 63

Query: 62  KIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTN 121
           K RK R+AF+TRSQVD+LDDGYRWRKYGQKAVKN+KFPRSYY+C+H GC VKKQ+QRLT 
Sbjct: 64  KARKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHHGCNVKKQVQRLTK 123

Query: 122 DEGVVLTTYEGVHSHPIETPQDNFQHILTHMQIY 141
           DEGVV+TTYEGVH+HPIE   DNF+HIL  MQIY
Sbjct: 124 DEGVVVTTYEGVHTHPIEKTTDNFEHILNQMQIY 157

[Close]

BLAST of ClCG11G009430 vs. TrEMBL
Match: S5CKE7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=WRKY17 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 4.1e-44
Identity = 85/110 (77.27%), Postives = 98/110 (89.09%), Query Frame = 1


Query: 35  KKTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQG 94
           KK SS S K EKKI+K R+AF+TRSQVD+LDDGYRWRKYGQKAVKN+KFPRSYY+C+HQG
Sbjct: 112 KKISSNS-KGEKKIKKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQG 171

Query: 95  CKVKKQIQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHILTHMQIYPSSF 145
           C VKKQ+QRLT DEG+V+TTYEG+HSHPIE   DNF+HILT MQIY +SF
Sbjct: 172 CNVKKQVQRLTRDEGIVITTYEGMHSHPIEKSTDNFEHILTQMQIYTNSF 220

[Close]

BLAST of ClCG11G009430 vs. TrEMBL
Match: A0A059Q918_GOSHI (WRKY transcription factor 60 OS=Gossypium hirsutum GN=WRKY60 PE=2 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 4.1e-44
Identity = 93/161 (57.76%), Postives = 112/161 (69.57%), Query Frame = 1


Query: 4   NYQIFFPAS--SSSHNSLPTT--PMDHQFQ--------------------EESSVKKTSS 63
           NYQ+FFP S  S++  SLP    P    F                     ++  VK    
Sbjct: 3   NYQMFFPISAPSTAAQSLPLNMAPNSQAFNSFHGNSVDGFLGLKSTEDLIQKPEVKDFMK 62

Query: 64  GSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKK 123
            S K EKKIRK R+AF+TRSQVD+LDDGYRWRKYGQKAVKN+KFPRSYY+C+H+GCKVKK
Sbjct: 63  SSQKMEKKIRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHEGCKVKK 122

Query: 124 QIQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHILTHMQIY 141
           Q+QRLT DE VV+TTYEG+H+HPI+ P DNF+HIL+ MQIY
Sbjct: 123 QVQRLTKDESVVVTTYEGMHTHPIQKPTDNFEHILSQMQIY 163

[Close]

BLAST of ClCG11G009430 vs. TrEMBL
Match: B9RBG1_RICCO (WRKY transcription factor, putative OS=Ricinus communis GN=RCOM_1676030 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 5.4e-44
Identity = 88/143 (61.54%), Postives = 110/143 (76.92%), Query Frame = 1


Query: 1   MDNNYQIFFPASSS---SHNSLPTTPMDHQFQEESSVKKTSSGSMKSEKKIRKGRFAFET 60
           ++N++Q+    S +   ++N L +T   H      S  +T S   K EKKIRK R+AF+T
Sbjct: 50  IENDHQVASSVSRTEVFNNNDLKST-QSHAHIAIGSESETKSSKKKGEKKIRKPRYAFQT 109

Query: 61  RSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEG 120
           RSQVD+LDDGYRWRKYGQKAVKN+KFPRSYY+C++QGC VKKQ+QRLT DEGVV+TTYEG
Sbjct: 110 RSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTYQGCNVKKQVQRLTKDEGVVITTYEG 169

Query: 121 VHSHPIETPQDNFQHILTHMQIY 141
            H+HPIE P DNF+HIL+ MQIY
Sbjct: 170 AHTHPIEKPTDNFEHILSQMQIY 191

[Close]

BLAST of ClCG11G009430 vs. TAIR10
Match: AT5G13080.1 (AT5G13080.1 WRKY DNA-binding protein 75)

HSP 1 Score: 172.6 bits (436), Expect = 1.8e-43
Identity = 89/144 (61.81%), Postives = 106/144 (73.61%), Query Frame = 1


Query: 3   NNYQIFFPASSSSHNSLPTTPMDHQFQEESSVKKTSSGSMKS----EKKIRKGRFAFETR 62
           +N  ++ P  S   +S P     HQ +EESS K  S G  KS    +KK +K R+AF+TR
Sbjct: 5   DNGSLYAPFLSLKSHSKPEL---HQGEEESS-KVRSEGCSKSVESSKKKGKKQRYAFQTR 64

Query: 63  SQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGV 122
           SQVD+LDDGYRWRKYGQKAVKN+KFPRSYY+C++ GC VKKQ+QRLT D+ VV+TTYEGV
Sbjct: 65  SQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTYGGCNVKKQVQRLTVDQEVVVTTYEGV 124

Query: 123 HSHPIETPQDNFQHILTHMQIYPS 143
           HSHPIE   +NF+HILT MQIY S
Sbjct: 125 HSHPIEKSTENFEHILTQMQIYSS 144

[Close]

BLAST of ClCG11G009430 vs. TAIR10
Match: AT3G01970.1 (AT3G01970.1 WRKY DNA-binding protein 45)

HSP 1 Score: 164.9 bits (416), Expect = 3.8e-41
Identity = 79/141 (56.03%), Postives = 99/141 (70.21%), Query Frame = 1


Query: 2   DNNYQIFFPASSSSHNSLPTTP-MDHQFQEESSVKKTSSGSMKSEKKIRKGRFAFETRSQ 61
           D    + FP SSS    L     +D+  Q  +S ++      K +KK R+ R+AF+TRSQ
Sbjct: 3   DRRCDVLFPCSSSVDPRLTEFHGVDNSAQPTTSSEEKPRS--KKKKKEREARYAFQTRSQ 62

Query: 62  VDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHS 121
           VD+LDDGYRWRKYGQKAVKN+ FPRSYYKC+ +GC+VKKQ+QR   DEGVV+TTY+GVH+
Sbjct: 63  VDILDDGYRWRKYGQKAVKNNPFPRSYYKCTEEGCRVKKQVQRQWGDEGVVVTTYQGVHT 122

Query: 122 HPIETPQDNFQHILTHMQIYP 142
           H ++ P DNF HILT M I+P
Sbjct: 123 HAVDKPSDNFHHILTQMHIFP 141

[Close]

BLAST of ClCG11G009430 vs. TAIR10
Match: AT5G49520.1 (AT5G49520.1 WRKY DNA-binding protein 48)

HSP 1 Score: 124.4 bits (311), Expect = 5.7e-29
Identity = 54/96 (56.25%), Postives = 69/96 (71.88%), Query Frame = 1


Query: 27  QFQEESSVKKTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRS 86
           Q QE+   K       K++KK R+ RFAF T+S +D LDDGYRWRKYGQKAVKN  +PRS
Sbjct: 183 QQQEQKGTKPQLKAKKKNQKKAREARFAFLTKSDIDNLDDGYRWRKYGQKAVKNSPYPRS 242

Query: 87  YYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSHP 123
           YY+C+  GC VKK+++R ++D  +V+TTYEG H+HP
Sbjct: 243 YYRCTTVGCGVKKRVERSSDDPSIVMTTYEGQHTHP 278

[Close]

BLAST of ClCG11G009430 vs. TAIR10
Match: AT1G29860.1 (AT1G29860.1 WRKY DNA-binding protein 71)

HSP 1 Score: 124.0 bits (310), Expect = 7.4e-29
Identity = 58/109 (53.21%), Postives = 74/109 (67.89%), Query Frame = 1


Query: 31  ESSVKKTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKC 90
           ESS + T  G  K EKK R+ R AF T+S++D L+DGYRWRKYGQKAVKN  +PRSYY+C
Sbjct: 102 ESSKQLTKQGKKKGEKKEREVRVAFMTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRC 161

Query: 91  SHQGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIETPQDN---FQHILTH 137
           + Q C VKK+++R   D  +V+TTYEG H+HPI +        +H+L H
Sbjct: 162 TTQKCNVKKRVERSFQDPSIVITTYEGKHNHPIPSTLRGTVAAEHLLVH 210

[Close]

BLAST of ClCG11G009430 vs. TAIR10
Match: AT5G41570.1 (AT5G41570.1 WRKY DNA-binding protein 24)

HSP 1 Score: 122.5 bits (306), Expect = 2.2e-28
Identity = 65/136 (47.79%), Postives = 81/136 (59.56%), Query Frame = 1


Query: 8   FFPASSSSHNSLPTTPMDHQFQEESSVKKTSSGSMKSEKKIRK-GRFAFETRSQVDVLDD 67
           ++P S   H + P  P + Q  E+        G    EK+ RK  R AF TRS  DVLDD
Sbjct: 49  WYPESFHVH-APPLPPENDQIGEK--------GKELKEKRSRKVPRIAFHTRSDDDVLDD 108

Query: 68  GYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIETP 127
           GYRWRKYGQK+VK++  PRSYY+C++  C VKKQ+QRL  D  VV+TTYEGVH+HP E  
Sbjct: 109 GYRWRKYGQKSVKHNAHPRSYYRCTYHTCNVKKQVQRLAKDPNVVVTTYEGVHNHPCEKL 168

Query: 128 QDNFQHILTHMQIYPS 143
            +    +L  +Q   S
Sbjct: 169 METLNPLLRQLQFLSS 175

[Close]

BLAST of ClCG11G009430 vs. NCBI nr
Match: gi|659081408|ref|XP_008441319.1| (PREDICTED: probable WRKY transcription factor 75 [Cucumis melo])

HSP 1 Score: 208.4 bits (529), Expect = 8.5e-51
Identity = 106/147 (72.11%), Postives = 117/147 (79.59%), Query Frame = 1


Query: 1   MDNNYQIFFPASSSS--HNSLPTTPMDHQFQEESSVKKTSS---GSMKSEKKIRKGRFAF 60
           MD++Y  F P SSSS  HNSL     D + +EESS+KK  S   G    +KK RK RFAF
Sbjct: 1   MDSSYINFLPTSSSSFFHNSLAMDDHDDELEEESSLKKIKSEVSGGKLKKKKTRKRRFAF 60

Query: 61  ETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTY 120
           ETRSQVDVLDDGYRWRKYGQKAVKN+KFPRSYYKCS++GCKVKKQIQRLT DE VVLTTY
Sbjct: 61  ETRSQVDVLDDGYRWRKYGQKAVKNNKFPRSYYKCSNEGCKVKKQIQRLTKDEEVVLTTY 120

Query: 121 EGVHSHPIETPQDNFQHILTHMQIYPS 143
           EGVHSHPIE P D+FQ+ILTHM IY S
Sbjct: 121 EGVHSHPIEKPHDSFQNILTHMHIYSS 147

[Close]

BLAST of ClCG11G009430 vs. NCBI nr
Match: gi|778673213|ref|XP_004138624.2| (PREDICTED: probable WRKY transcription factor 45 [Cucumis sativus])

HSP 1 Score: 204.5 bits (519), Expect = 1.2e-49
Identity = 98/123 (79.67%), Postives = 108/123 (87.80%), Query Frame = 1


Query: 25  DHQFQEESSVKKTSS----GSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKN 84
           D + +EE S+KK  S    G +K +KKIRK RFAFETRSQVDVLDDGYRWRKYGQKAVKN
Sbjct: 6   DDELEEERSLKKVKSEESGGELKKKKKIRKRRFAFETRSQVDVLDDGYRWRKYGQKAVKN 65

Query: 85  DKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHILTHMQIY 144
           +KFPRSYYKCS++GCKVKKQIQRLTNDEGVVLTTYEGVHSHPIE P D+FQ+ILTHM IY
Sbjct: 66  NKFPRSYYKCSNEGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIEKPHDSFQNILTHMHIY 125

[Close]

BLAST of ClCG11G009430 vs. NCBI nr
Match: gi|388507704|gb|AFK41918.1| (unknown [Lotus japonicus])

HSP 1 Score: 189.5 bits (480), Expect = 4.1e-45
Identity = 93/154 (60.39%), Postives = 107/154 (69.48%), Query Frame = 1


Query: 2   DNNYQIFFPASSSS-------HNSLPTTPMDHQFQEES--------SVKKTSSGSMKSEK 61
           +NNY + FP  SSS       HN       DHQF++          S    S    K EK
Sbjct: 4   NNNYSMLFPCPSSSTSVVGSSHNGYSGLNNDHQFEKRVEDARDGILSQINVSDNKKKGEK 63

Query: 62  KIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTN 121
           K RK R+AF+TRSQVD+LDDGYRWRKYGQKAVKN+KFPRSYY+C+H GC VKKQ+QRLT 
Sbjct: 64  KARKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHHGCNVKKQVQRLTK 123

Query: 122 DEGVVLTTYEGVHSHPIETPQDNFQHILTHMQIY 141
           DEGVV+TTYEGVH+HPIE   DNF+HIL  MQIY
Sbjct: 124 DEGVVVTTYEGVHTHPIEKTTDNFEHILNQMQIY 157

[Close]

BLAST of ClCG11G009430 vs. NCBI nr
Match: gi|543887264|gb|AGV75958.1| (WRKY transcription factor 60 [Gossypium hirsutum])

HSP 1 Score: 185.7 bits (470), Expect = 5.9e-44
Identity = 93/161 (57.76%), Postives = 112/161 (69.57%), Query Frame = 1


Query: 4   NYQIFFPAS--SSSHNSLPTT--PMDHQFQ--------------------EESSVKKTSS 63
           NYQ+FFP S  S++  SLP    P    F                     ++  VK    
Sbjct: 3   NYQMFFPISAPSTAAQSLPLNMAPNSQAFNSFHGNSVDGFLGLKSTEDLIQKPEVKDFMK 62

Query: 64  GSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKK 123
            S K EKKIRK R+AF+TRSQVD+LDDGYRWRKYGQKAVKN+KFPRSYY+C+H+GCKVKK
Sbjct: 63  SSQKMEKKIRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHEGCKVKK 122

Query: 124 QIQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHILTHMQIY 141
           Q+QRLT DE VV+TTYEG+H+HPI+ P DNF+HIL+ MQIY
Sbjct: 123 QVQRLTKDESVVVTTYEGMHTHPIQKPTDNFEHILSQMQIY 163

[Close]

BLAST of ClCG11G009430 vs. NCBI nr
Match: gi|802724411|ref|XP_012085719.1| (PREDICTED: probable WRKY transcription factor 75 [Jatropha curcas])

HSP 1 Score: 185.7 bits (470), Expect = 5.9e-44
Identity = 85/110 (77.27%), Postives = 98/110 (89.09%), Query Frame = 1


Query: 35  KKTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQG 94
           KK SS S K EKKI+K R+AF+TRSQVD+LDDGYRWRKYGQKAVKN+KFPRSYY+C+HQG
Sbjct: 112 KKISSNS-KGEKKIKKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQG 171

Query: 95  CKVKKQIQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHILTHMQIYPSSF 145
           C VKKQ+QRLT DEG+V+TTYEG+HSHPIE   DNF+HILT MQIY +SF
Sbjct: 172 CNVKKQVQRLTRDEGIVITTYEGMHSHPIEKSTDNFEHILTQMQIYTNSF 220

The following BLAST results are available for this feature:

BLAST of ClCG11G009430 vs. Swiss-Prot


Match Name	E-value	Identity	Description
WRK75_ARATH	3.2e-42	61.81	Probable WRKY transcription factor 75 OS=Arabidopsis thaliana GN=WRKY75 PE=2 SV=...	[more]
WRK45_ARATH	6.7e-40	56.03	Probable WRKY transcription factor 45 OS=Arabidopsis thaliana GN=WRKY45 PE=2 SV=...	[more]
WRK48_ARATH	1.0e-27	56.25	Probable WRKY transcription factor 48 OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=...	[more]
WRK71_ARATH	1.3e-27	53.21	Probable WRKY transcription factor 71 OS=Arabidopsis thaliana GN=WRKY71 PE=2 SV=...	[more]
WRK24_ARATH	3.8e-27	47.79	Probable WRKY transcription factor 24 OS=Arabidopsis thaliana GN=WRKY24 PE=2 SV=...	[more]

BLAST of ClCG11G009430 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT01_CUCSA	8.5e-50	79.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G406060 PE=4 SV=1	[more]
I3SNS6_LOTJA	2.8e-45	60.39	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]
S5CKE7_JATCU	4.1e-44	77.27	Uncharacterized protein OS=Jatropha curcas GN=WRKY17 PE=4 SV=1	[more]
A0A059Q918_GOSHI	4.1e-44	57.76	WRKY transcription factor 60 OS=Gossypium hirsutum GN=WRKY60 PE=2 SV=1	[more]
B9RBG1_RICCO	5.4e-44	61.54	WRKY transcription factor, putative OS=Ricinus communis GN=RCOM_1676030 PE=4 SV=...	[more]

BLAST of ClCG11G009430 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13080.1	1.8e-43	61.81	WRKY DNA-binding protein 75	[more]
AT3G01970.1	3.8e-41	56.03	WRKY DNA-binding protein 45	[more]
AT5G49520.1	5.7e-29	56.25	WRKY DNA-binding protein 48	[more]
AT1G29860.1	7.4e-29	53.21	WRKY DNA-binding protein 71	[more]
AT5G41570.1	2.2e-28	47.79	WRKY DNA-binding protein 24	[more]

BLAST of ClCG11G009430 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659081408\|ref\|XP_008441319.1\|	8.5e-51	72.11	PREDICTED: probable WRKY transcription factor 75 [Cucumis melo]	[more]
gi\|778673213\|ref\|XP_004138624.2\|	1.2e-49	79.67	PREDICTED: probable WRKY transcription factor 45 [Cucumis sativus]	[more]
gi\|388507704\|gb\|AFK41918.1\|	4.1e-45	60.39	unknown [Lotus japonicus]	[more]
gi\|543887264\|gb\|AGV75958.1\|	5.9e-44	57.76	WRKY transcription factor 60 [Gossypium hirsutum]	[more]
gi\|802724411\|ref\|XP_012085719.1\|	5.9e-44	77.27	PREDICTED: probable WRKY transcription factor 75 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003657	WRKY_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0043565	sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010055	atrichoblast differentiation
biological_process	GO:0048527	lateral root development
biological_process	GO:0000122	negative regulation of transcription from RNA polymerase II promoter
biological_process	GO:0043620	regulation of DNA-templated transcription in response to stress
biological_process	GO:0032107	regulation of response to nutrient levels
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0009536	plastid
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0001046	core promoter sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG11G009430.1	ClCG11G009430.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003657	WRKY domain	GENE3D	G3DSA:2.20.25.80		coord: 49..122 score: 8.0
IPR003657	WRKY domain	PFAM	PF03106	WRKY	coord: 65..122 score: 1.6
IPR003657	WRKY domain	SMART	SM00774	WRKY_cls	coord: 64..123 score: 3.6
IPR003657	WRKY domain	PROFILE	PS50811	WRKY	coord: 59..124 score: 28
IPR003657	WRKY domain	unknown	SSF118290	WRKY DNA-binding domain	coord: 57..123 score: 1.15
None	No IPR available	PANTHER	PTHR31221	FAMILY NOT NAMED	coord: 43..142 score: 1.3
None	No IPR available	PANTHER	PTHR31221:SF25	WRKY TRANSCRIPTION FACTOR 45-RELATED	coord: 43..142 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG11G009430	Csa2G406060	Cucumber (Chinese Long) v2	cuwcgB098
ClCG11G009430	MELO3C008175	Melon (DHL92) v3.5.1	mewcgB270
ClCG11G009430	Cla003370	Watermelon (97103) v1	wcgwmB105
ClCG11G009430	CSPI02G25500	Wild cucumber (PI 183967)	cpiwcgB106
ClCG11G009430	Cucsa.087850	Cucumber (Gy14) v1	cgywcgB100
ClCG11G009430	Lsi03G004080	Bottle gourd (USVL1VR-Ls)	lsiwcgB229
ClCG11G009430	MELO3C008175.2	Melon (DHL92) v3.6.1	medwcgB261
ClCG11G009430	CsaV3_2G034030	Cucumber (Chinese Long) v3	cucwcgB116

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG11G009430	Melon (DHL92) v3.5.1	mewcgB370
ClCG11G009430	Cucurbita pepo (Zucchini)	cpewcgB164
ClCG11G009430	Cucumber (Gy14) v2	cgybwcgB098
ClCG11G009430	Silver-seed gourd	carwcgB0986
ClCG11G009430	Watermelon (97103) v2	wcgwmbB067
ClCG11G009430	Wax gourd	wcgwgoB162
ClCG11G009430	Cucurbita maxima (Rimu)	cmawcgB251