Csa2G381730 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G381730
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionRNA-dependent RNA polymerase 6; contains IPR007855 (RNA-dependent RNA polymerase, eukaryotic-type)
LocationChr2 : 19586928 .. 19591693 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAAACAAAGCAAAATCACGTAGTCATGGGCACGAAGACCGCTTTGCTCTCAGTCAATATTCCACCATAAATTATTACTTCACTCCTAAACCTTACTCAAGAAGCTATCCACCCATACCCATCAGCTTATATATTTAAAATCTTAATGTTCTCATTCTTCAGCAATCTGCAAAGATTTCTGATTCTTGGGAGTATCAGTTAGAGGAACCAAAATTCGCAAGTTATTGTTTCTTTGAGGTTAGTCGTTTCAATTTATCAAGAATGTCATTTCTTTTTCACTTTAAGAATTTGGGGTTTTTTGATATTGTTTGAAACTCTGTTTGGGAAAATGTGGGGTAAGGAATGGGTGAAACTGTTTGATGTTTATCATCTCATGGGTTTGGTAGATAAAAATTTACGTTTCTCCCTATTTAGCCTACTTCACAACCGCGGGGGGGCAGTTTTTGGAAATTTTGCCCTGTATGTATGACTTTACAAGAATCAGATAAGTTCAAAAGAATACAAGAAATCTGTTATGGGCAAATATTACTGAGAACTTGAGGATGAACTTCAACACTCAGTTTTCTGGAGTTGTTGATAGAACGGTTTTTTATTATTGTTTCATTATTTTATTTTACTTATGTATTCTGTGCTCATCAACTTAAGATTTTGTTTATAAAAGAAAACCTCTCAACTAATTTATTGAGTATTATGAGGAATTTAAATTGCCTTCTATTTTTCTCAGTCAGAGAAATAAATGGGGTCAGAAGAAGGTGAAAAGATAGTGGTAACTCAAGTCAGCTTTGGCGGATTTGACAGTGATGTTAAAGCTAGAGATCTTATGAGTTATCTGGAATCTGAGATTGGGCTTGTGGACAGATGTAGATTGAAAACTTCATGGACTCCTCCAGAATCGTACCCAGATTTTGAAGTCAGCAATGTTGCTAATGTTATAAAATCTGATGATTACAAGAAGGTGGTGCCTCATGCATTTGTACATTTTGTCTCACCTGACTCTGCTGCTGAGGCTCTACATGCTGCAGGTCGTGGTGAGCTTATTTTTAATGATAAATTGTTGAAGGCGAGTTTGGGGCCTGAGAGTCCTTTTCATATAAATCAGAGGCGAAGGACTAAGGTTCCCTTTAAGTTATCTGATGTGCAAGTTGATATAGGGAACTTAACTTGTCATGATGGGTTTTCAGTTGCTTGGAGAGGGCCTTCGAGTGGAATGGATTTTCTAGTGGATCCCTTTGATGGAACCTGTAAATTTTGTTTCACGAAGGATACTGCATTCTCTTTTAAAGATAACAACAAGCATACATTTTTGAAGTGTGATTACAAAATGGAGTTCATAGTGAGGGACATTAATCAGATCACAAGATATACGGATACTTCATGTTATGTTATTCTCTTGCAGCTTACAGCATCACCCTGCATTTGGTATAGAACAGCAGATGATGATATTGCCAAATTAGTTCCATATGATTTGTTGGACGATGATGATCCATGGATCCGGACAACAGATTTCACGATTAGTGGAGCTATTGGTCGTTGTAATACTTTCAGAGTTTCAGTCCCACCCCGCTATGGCATCAAGCTGAATAATGCCATGAATTATTTAAAAGAACAAAGAGTGCACCAGGTCTCCCTCAACCGGCCTCCCAAGATCCTGAATGAACCAGATTATGGTGTGCAAATGACTGATCACTTCTTTTGCATCCTTTATAAAAAAGACATATCCTTTGAGATATTATTTCTGGTAAATGCCGTAATGCACAAAGGGATAATCAACCAGCACCAAATGTCTGATAGATTTTTTGATTTGCTAAGAAACCAGCCCAATGAAGTTAATTTGGCTGCTTTAAGTCATATTCATGCTTTTAGACGTCCTGTATTGGATGCCTGTAAGAAGCTAAAACTTGTACAAGAATGGTTGTTGAAGAACCCTACACTTTTGAAAAGATCTAAAGAGCTGGTAGATATTGTTGAAATCAGGAGACTAGTAATAACTCCTTCAAAAGCATATTGCTTTCCACCTGAAGTTGAACTGTCCAATAGGGTTTTGAGAAGATACAAGGATGTTGCCGATAGGTTCCTCAGGGTTACCTTCATGGATGAAGGCATGAAGAAAATCAATTCACACGTTTATACCTATTATGTTGCCCCTATAGTAAAGGAAATTACTTCAAGCTCCTTTCCCCAGAAGACTAAAATATTTGCAAGGATGAAACATATTCTGAAACATGGATTTCACTTGTGTGGTAGGAAATACTCCTTTTTGGCGTATTCATCCAACCAACTGAGGGACCAATCAGCTTGGTTTTTTGCTGAATGCAAAAGTATAAGTGTTGATGCTATTTTGGGTTGGATGGGAAAATTTACCAATAAAAATGTTGCAAAGTGTGCTGCTAGAATTGGTCAGTGCTTTTCATCTACTTATGCAACAATTGAAGTTCCAAGAAACATGGTCAATCATGATCTTTCTGATGTTGAGAGGAATGGATATGTTTTCTCTGATGGGATTGGAACCATTACTCCTGATCTTGCGCAGGAAGTTGCAGACAAACTAAAAATGGATGGGAGCCCGCCCTGCGCTTACCAAATTAGATATGCAGGTTACAAAGGTGTTGTTGCCACTTGGCCATCCAAGAAGGACGGAATCAGACTTGCTTTAAGGCCAAGCATGAATAAATTTGAATCAAATCATAGAATCTTGGAGATCTGTTCATGGACTAGATTTCAGCCAGGTTTTCTTAATAGGCAGATTATAACCCTCCTTTCTACACTAAGTGTCCCTGATGAAATTTTCTGGAGTATGCAGGAGACTATGATTTCAAAACTGGATAGAATGATCACCGATACAGATGTGGCGTTTGAAGTTCTCACTGCATCCTGTGCCGAGCAAGGAAATGCAGCGGCAATTATGTTGAGTGCTGGTTTTGAACCTCGAACCGAACCTCATCTAAGGGGCATGCTAATGTGTATAAGAGCAGCACAGCTGTGGGGCCTTCGGGAAAAAGCAAGGATTTTTGTTACTGAGGGGAGGTGGTGTATGGGGTGTTTCGACGAGAGCGGCGTGTTACAAGAAGGTCAATGCTTCATCCAAGTATCCACTCCATTGCTTGAGAAGTGTTTCTCCAAGCATGGGTCTCTCTTTGCTGAGACAAAGAACAATCTTACTGTAGTAAGAGGGACTGTAGTCATAGCCAAAAATCCGTGCCTTCATCCAGGAGATGTGAGAATTCTTGAAGCAGTTGATGCTCCCGAGTTGCATCATTTGTACGATTGCCTCGTGTTTCCTCGAAATGGTGAACGGCCCCATACCAATGAAGCTTCTGGAAGTGATTTGGATGGGGATCTCTACTTCACTACTTGGGATGGAAATCTTATTCCACCTAGTAAAAAAAGTTGGCCACCTATGGAGTATGCTCCAGCGGAAGTAAAGACTCTTCAACGTAAAATTACTCGATGGGTATTGTCCTCCAATTCAACTTTTTTTACCCTATGGTTGTTCTTCATTACCTGCATGCATTATTCTTTAATTCTTCCTGGACTCTTAAATAACTTCTTTACATGAACTAGAATGCCTACTCTGTTTCTTTTATTATTTATTGATATTCTTTTTTCTTCATTATTTCTTCGTATTTATCTTATCTTATCATTTTATTGTATTTATCTTATCATTTTATAGGATATAATGGAGTTCTTTGCGAAAAATATGATCAATGAGAGTCTGGGGACGATATGCAATGCGCATGTTGTTCATGCTGACCGCAGCAAGCATGGAGCTTTGGATGAGAACTGTATACAATTATCTGAATTAGCTGCCACAGCTGTTGATTTCCCCAAGACAGGGAAGCTCGTGACCATGCCTCCCCATTTAAAACCAAAACTATATCCAGATTTTATGGGAAAGGAAGCTACTCAATCATACAAGTCCACCAAAATTCTAGGAAAAATGTACCGCCGAATTAGAGATGCATATGATGATGATGATATGATCACATCACGTGAGCTAAATTTTACTCCTGGCGATGTCCATTACGATGTAGACCTCGAAGTGGCAGGAGCAGAAGATTTCATTGCAGAAGCATGGGATCAAAAATGCTCATACGATGGTCAGCTGAGCGGTTTACTGGGACAATATAAAGTTAATAGGGAAGAAGAGATTGTCACTGGACATATTTGGTCCATGCCAAAGTATGTTAGTAGGAAGCAAGGAGAGCTGAAGGAGAAGCTTAAACATTCTTATAGCACTCTTAAGAAAGACTTCAGGCAAGTTTTTGAGAATCTTGGGCCAGAGTTTGAGCAACTCACTTGTGATGAAAGGAATGCACTGTATGAAAAAAAGGCATCTGCCTGGTATCAGGTGGCATACCATCCAACTTGGTTGAAGAAATCATTGGAGCTGCGAGAACCCGACGCTCCTGAGGCCGTCCCGATGTTAAGCTTTCCTTGGATTGCTGCCGATTATCTTGCACGAATCAAAATCAAATGCAGGCGGACGAAAAGTTTTGACCCAACAAAGCCGATTAACTCTTTGGCAAGTTATCTCTCTGATCGAATGTGAACATCCGAATGGCTCTCGCACTTTTGTAGCTGATTTAGATAATCTGGTTGCAAGACCACTCTGCCAGTATAGAACATGATTGTTATGTAAACTTGTTGTAGCTTGTAATGTAGCAGTAGCAGTATCGGGTTGGATTGTACTATAAATTTCGAGGTGTTCCTTGAAACAATATTGTCATTTATATTTCTGAAGATTCAAAATGTTTGTATTAAAGGG

mRNA sequence

ATGGGGTCAGAAGAAGGTGAAAAGATAGTGGTAACTCAAGTCAGCTTTGGCGGATTTGACAGTGATGTTAAAGCTAGAGATCTTATGAGTTATCTGGAATCTGAGATTGGGCTTGTGGACAGATGTAGATTGAAAACTTCATGGACTCCTCCAGAATCGTACCCAGATTTTGAAGTCAGCAATGTTGCTAATGTTATAAAATCTGATGATTACAAGAAGGTGGTGCCTCATGCATTTGTACATTTTGTCTCACCTGACTCTGCTGCTGAGGCTCTACATGCTGCAGGTCGTGGTGAGCTTATTTTTAATGATAAATTGTTGAAGGCGAGTTTGGGGCCTGAGAGTCCTTTTCATATAAATCAGAGGCGAAGGACTAAGGTTCCCTTTAAGTTATCTGATGTGCAAGTTGATATAGGGAACTTAACTTGTCATGATGGGTTTTCAGTTGCTTGGAGAGGGCCTTCGAGTGGAATGGATTTTCTAGTGGATCCCTTTGATGGAACCTGTAAATTTTGTTTCACGAAGGATACTGCATTCTCTTTTAAAGATAACAACAAGCATACATTTTTGAAGTGTGATTACAAAATGGAGTTCATAGTGAGGGACATTAATCAGATCACAAGATATACGGATACTTCATGTTATGTTATTCTCTTGCAGCTTACAGCATCACCCTGCATTTGGTATAGAACAGCAGATGATGATATTGCCAAATTAGTTCCATATGATTTGTTGGACGATGATGATCCATGGATCCGGACAACAGATTTCACGATTAGTGGAGCTATTGGTCGTTGTAATACTTTCAGAGTTTCAGTCCCACCCCGCTATGGCATCAAGCTGAATAATGCCATGAATTATTTAAAAGAACAAAGAGTGCACCAGGTCTCCCTCAACCGGCCTCCCAAGATCCTGAATGAACCAGATTATGGTGTGCAAATGACTGATCACTTCTTTTGCATCCTTTATAAAAAAGACATATCCTTTGAGATATTATTTCTGGTAAATGCCGTAATGCACAAAGGGATAATCAACCAGCACCAAATGTCTGATAGATTTTTTGATTTGCTAAGAAACCAGCCCAATGAAGTTAATTTGGCTGCTTTAAGTCATATTCATGCTTTTAGACGTCCTGTATTGGATGCCTGTAAGAAGCTAAAACTTGTACAAGAATGGTTGTTGAAGAACCCTACACTTTTGAAAAGATCTAAAGAGCTGGTAGATATTGTTGAAATCAGGAGACTAGTAATAACTCCTTCAAAAGCATATTGCTTTCCACCTGAAGTTGAACTGTCCAATAGGGTTTTGAGAAGATACAAGGATGTTGCCGATAGGTTCCTCAGGGTTACCTTCATGGATGAAGGCATGAAGAAAATCAATTCACACGTTTATACCTATTATGTTGCCCCTATAGTAAAGGAAATTACTTCAAGCTCCTTTCCCCAGAAGACTAAAATATTTGCAAGGATGAAACATATTCTGAAACATGGATTTCACTTGTGTGGTAGGAAATACTCCTTTTTGGCGTATTCATCCAACCAACTGAGGGACCAATCAGCTTGGTTTTTTGCTGAATGCAAAAGTATAAGTGTTGATGCTATTTTGGGTTGGATGGGAAAATTTACCAATAAAAATGTTGCAAAGTGTGCTGCTAGAATTGGTCAGTGCTTTTCATCTACTTATGCAACAATTGAAGTTCCAAGAAACATGGTCAATCATGATCTTTCTGATGTTGAGAGGAATGGATATGTTTTCTCTGATGGGATTGGAACCATTACTCCTGATCTTGCGCAGGAAGTTGCAGACAAACTAAAAATGGATGGGAGCCCGCCCTGCGCTTACCAAATTAGATATGCAGGTTACAAAGGTGTTGTTGCCACTTGGCCATCCAAGAAGGACGGAATCAGACTTGCTTTAAGGCCAAGCATGAATAAATTTGAATCAAATCATAGAATCTTGGAGATCTGTTCATGGACTAGATTTCAGCCAGGTTTTCTTAATAGGCAGATTATAACCCTCCTTTCTACACTAAGTGTCCCTGATGAAATTTTCTGGAGTATGCAGGAGACTATGATTTCAAAACTGGATAGAATGATCACCGATACAGATGTGGCGTTTGAAGTTCTCACTGCATCCTGTGCCGAGCAAGGAAATGCAGCGGCAATTATGTTGAGTGCTGGTTTTGAACCTCGAACCGAACCTCATCTAAGGGGCATGCTAATGTGTATAAGAGCAGCACAGCTGTGGGGCCTTCGGGAAAAAGCAAGGATTTTTGTTACTGAGGGGAGGTGGTGTATGGGGTGTTTCGACGAGAGCGGCGTGTTACAAGAAGGTCAATGCTTCATCCAAGTATCCACTCCATTGCTTGAGAAGTGTTTCTCCAAGCATGGGTCTCTCTTTGCTGAGACAAAGAACAATCTTACTGTAGTAAGAGGGACTGTAGTCATAGCCAAAAATCCGTGCCTTCATCCAGGAGATGTGAGAATTCTTGAAGCAGTTGATGCTCCCGAGTTGCATCATTTGTACGATTGCCTCGTGTTTCCTCGAAATGGTGAACGGCCCCATACCAATGAAGCTTCTGGAAGTGATTTGGATGGGGATCTCTACTTCACTACTTGGGATGGAAATCTTATTCCACCTAGTAAAAAAAGTTGGCCACCTATGGAGTATGCTCCAGCGGAAGTAAAGACTCTTCAACGTAAAATTACTCGATGGGATATAATGGAGTTCTTTGCGAAAAATATGATCAATGAGAGTCTGGGGACGATATGCAATGCGCATGTTGTTCATGCTGACCGCAGCAAGCATGGAGCTTTGGATGAGAACTGTATACAATTATCTGAATTAGCTGCCACAGCTGTTGATTTCCCCAAGACAGGGAAGCTCGTGACCATGCCTCCCCATTTAAAACCAAAACTATATCCAGATTTTATGGGAAAGGAAGCTACTCAATCATACAAGTCCACCAAAATTCTAGGAAAAATGTACCGCCGAATTAGAGATGCATATGATGATGATGATATGATCACATCACGTGAGCTAAATTTTACTCCTGGCGATGTCCATTACGATGTAGACCTCGAAGTGGCAGGAGCAGAAGATTTCATTGCAGAAGCATGGGATCAAAAATGCTCATACGATGGTCAGCTGAGCGGTTTACTGGGACAATATAAAGTTAATAGGGAAGAAGAGATTGTCACTGGACATATTTGGTCCATGCCAAAGTATGTTAGTAGGAAGCAAGGAGAGCTGAAGGAGAAGCTTAAACATTCTTATAGCACTCTTAAGAAAGACTTCAGGCAAGTTTTTGAGAATCTTGGGCCAGAGTTTGAGCAACTCACTTGTGATGAAAGGAATGCACTGTATGAAAAAAAGGCATCTGCCTGGTATCAGGTGGCATACCATCCAACTTGGTTGAAGAAATCATTGGAGCTGCGAGAACCCGACGCTCCTGAGGCCGTCCCGATGTTAAGCTTTCCTTGGATTGCTGCCGATTATCTTGCACGAATCAAAATCAAATGCAGGCGGACGAAAAGTTTTGACCCAACAAAGCCGATTAACTCTTTGGCAAGTTATCTCTCTGATCGAATGTGA

Coding sequence (CDS)

ATGGGGTCAGAAGAAGGTGAAAAGATAGTGGTAACTCAAGTCAGCTTTGGCGGATTTGACAGTGATGTTAAAGCTAGAGATCTTATGAGTTATCTGGAATCTGAGATTGGGCTTGTGGACAGATGTAGATTGAAAACTTCATGGACTCCTCCAGAATCGTACCCAGATTTTGAAGTCAGCAATGTTGCTAATGTTATAAAATCTGATGATTACAAGAAGGTGGTGCCTCATGCATTTGTACATTTTGTCTCACCTGACTCTGCTGCTGAGGCTCTACATGCTGCAGGTCGTGGTGAGCTTATTTTTAATGATAAATTGTTGAAGGCGAGTTTGGGGCCTGAGAGTCCTTTTCATATAAATCAGAGGCGAAGGACTAAGGTTCCCTTTAAGTTATCTGATGTGCAAGTTGATATAGGGAACTTAACTTGTCATGATGGGTTTTCAGTTGCTTGGAGAGGGCCTTCGAGTGGAATGGATTTTCTAGTGGATCCCTTTGATGGAACCTGTAAATTTTGTTTCACGAAGGATACTGCATTCTCTTTTAAAGATAACAACAAGCATACATTTTTGAAGTGTGATTACAAAATGGAGTTCATAGTGAGGGACATTAATCAGATCACAAGATATACGGATACTTCATGTTATGTTATTCTCTTGCAGCTTACAGCATCACCCTGCATTTGGTATAGAACAGCAGATGATGATATTGCCAAATTAGTTCCATATGATTTGTTGGACGATGATGATCCATGGATCCGGACAACAGATTTCACGATTAGTGGAGCTATTGGTCGTTGTAATACTTTCAGAGTTTCAGTCCCACCCCGCTATGGCATCAAGCTGAATAATGCCATGAATTATTTAAAAGAACAAAGAGTGCACCAGGTCTCCCTCAACCGGCCTCCCAAGATCCTGAATGAACCAGATTATGGTGTGCAAATGACTGATCACTTCTTTTGCATCCTTTATAAAAAAGACATATCCTTTGAGATATTATTTCTGGTAAATGCCGTAATGCACAAAGGGATAATCAACCAGCACCAAATGTCTGATAGATTTTTTGATTTGCTAAGAAACCAGCCCAATGAAGTTAATTTGGCTGCTTTAAGTCATATTCATGCTTTTAGACGTCCTGTATTGGATGCCTGTAAGAAGCTAAAACTTGTACAAGAATGGTTGTTGAAGAACCCTACACTTTTGAAAAGATCTAAAGAGCTGGTAGATATTGTTGAAATCAGGAGACTAGTAATAACTCCTTCAAAAGCATATTGCTTTCCACCTGAAGTTGAACTGTCCAATAGGGTTTTGAGAAGATACAAGGATGTTGCCGATAGGTTCCTCAGGGTTACCTTCATGGATGAAGGCATGAAGAAAATCAATTCACACGTTTATACCTATTATGTTGCCCCTATAGTAAAGGAAATTACTTCAAGCTCCTTTCCCCAGAAGACTAAAATATTTGCAAGGATGAAACATATTCTGAAACATGGATTTCACTTGTGTGGTAGGAAATACTCCTTTTTGGCGTATTCATCCAACCAACTGAGGGACCAATCAGCTTGGTTTTTTGCTGAATGCAAAAGTATAAGTGTTGATGCTATTTTGGGTTGGATGGGAAAATTTACCAATAAAAATGTTGCAAAGTGTGCTGCTAGAATTGGTCAGTGCTTTTCATCTACTTATGCAACAATTGAAGTTCCAAGAAACATGGTCAATCATGATCTTTCTGATGTTGAGAGGAATGGATATGTTTTCTCTGATGGGATTGGAACCATTACTCCTGATCTTGCGCAGGAAGTTGCAGACAAACTAAAAATGGATGGGAGCCCGCCCTGCGCTTACCAAATTAGATATGCAGGTTACAAAGGTGTTGTTGCCACTTGGCCATCCAAGAAGGACGGAATCAGACTTGCTTTAAGGCCAAGCATGAATAAATTTGAATCAAATCATAGAATCTTGGAGATCTGTTCATGGACTAGATTTCAGCCAGGTTTTCTTAATAGGCAGATTATAACCCTCCTTTCTACACTAAGTGTCCCTGATGAAATTTTCTGGAGTATGCAGGAGACTATGATTTCAAAACTGGATAGAATGATCACCGATACAGATGTGGCGTTTGAAGTTCTCACTGCATCCTGTGCCGAGCAAGGAAATGCAGCGGCAATTATGTTGAGTGCTGGTTTTGAACCTCGAACCGAACCTCATCTAAGGGGCATGCTAATGTGTATAAGAGCAGCACAGCTGTGGGGCCTTCGGGAAAAAGCAAGGATTTTTGTTACTGAGGGGAGGTGGTGTATGGGGTGTTTCGACGAGAGCGGCGTGTTACAAGAAGGTCAATGCTTCATCCAAGTATCCACTCCATTGCTTGAGAAGTGTTTCTCCAAGCATGGGTCTCTCTTTGCTGAGACAAAGAACAATCTTACTGTAGTAAGAGGGACTGTAGTCATAGCCAAAAATCCGTGCCTTCATCCAGGAGATGTGAGAATTCTTGAAGCAGTTGATGCTCCCGAGTTGCATCATTTGTACGATTGCCTCGTGTTTCCTCGAAATGGTGAACGGCCCCATACCAATGAAGCTTCTGGAAGTGATTTGGATGGGGATCTCTACTTCACTACTTGGGATGGAAATCTTATTCCACCTAGTAAAAAAAGTTGGCCACCTATGGAGTATGCTCCAGCGGAAGTAAAGACTCTTCAACGTAAAATTACTCGATGGGATATAATGGAGTTCTTTGCGAAAAATATGATCAATGAGAGTCTGGGGACGATATGCAATGCGCATGTTGTTCATGCTGACCGCAGCAAGCATGGAGCTTTGGATGAGAACTGTATACAATTATCTGAATTAGCTGCCACAGCTGTTGATTTCCCCAAGACAGGGAAGCTCGTGACCATGCCTCCCCATTTAAAACCAAAACTATATCCAGATTTTATGGGAAAGGAAGCTACTCAATCATACAAGTCCACCAAAATTCTAGGAAAAATGTACCGCCGAATTAGAGATGCATATGATGATGATGATATGATCACATCACGTGAGCTAAATTTTACTCCTGGCGATGTCCATTACGATGTAGACCTCGAAGTGGCAGGAGCAGAAGATTTCATTGCAGAAGCATGGGATCAAAAATGCTCATACGATGGTCAGCTGAGCGGTTTACTGGGACAATATAAAGTTAATAGGGAAGAAGAGATTGTCACTGGACATATTTGGTCCATGCCAAAGTATGTTAGTAGGAAGCAAGGAGAGCTGAAGGAGAAGCTTAAACATTCTTATAGCACTCTTAAGAAAGACTTCAGGCAAGTTTTTGAGAATCTTGGGCCAGAGTTTGAGCAACTCACTTGTGATGAAAGGAATGCACTGTATGAAAAAAAGGCATCTGCCTGGTATCAGGTGGCATACCATCCAACTTGGTTGAAGAAATCATTGGAGCTGCGAGAACCCGACGCTCCTGAGGCCGTCCCGATGTTAAGCTTTCCTTGGATTGCTGCCGATTATCTTGCACGAATCAAAATCAAATGCAGGCGGACGAAAAGTTTTGACCCAACAAAGCCGATTAACTCTTTGGCAAGTTATCTCTCTGATCGAATGTGA

Protein sequence

MGSEEGEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVSNVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHINQRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFSFKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKLVPYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNRPPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQPNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPSKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSFPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGKFTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEVADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTRFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAAAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQCFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHHLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQRKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLKKSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM*
Homology
[Close]
BLAST of Csa2G381730 vs. Swiss-Prot
Match: RDR6_ARATH (RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana GN=RDR6 PE=1 SV=1)

HSP 1 Score: 1642.9 bits (4253), Expect = 0.0e+00
Identity = 791/1199 (65.97%), Postives = 954/1199 (79.57%), Query Frame = 1 

Query: 1    MGSEEG-EKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEV 60
            MGSE   +K VVTQVS GGF     A+ L  YLE E+G+V RCRLKTSWTPP SYP+FE+
Sbjct: 1    MGSEGNMKKSVVTQVSIGGFGESTTAKQLTDYLEDEVGIVWRCRLKTSWTPPGSYPNFEI 60

Query: 61   SNVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHI 120
            ++ +N+   D+YKKV PHAFVHF   +SA  A+ AAG+  LI + + LK SLGP++P+ +
Sbjct: 61   ADTSNIPSIDEYKKVEPHAFVHFAVFESAGRAMDAAGQCNLILDGQPLKVSLGPKNPYSL 120

Query: 121  NQRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAF 180
            NQRRRT VP+KL+ + ++IG L   D F V+WR  + G+DFLVDPFD TCKFCF K TAF
Sbjct: 121  NQRRRTTVPYKLAGITLEIGTLVSRDDFFVSWR--AEGVDFLVDPFDNTCKFCFRKSTAF 180

Query: 181  SFKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKL 240
            SFKD   H  + CDYK+E +VRDI  + +Y     +V++LQL +SP +WYRTADDDI   
Sbjct: 181  SFKDAVMHAVINCDYKLELLVRDIQTVRQYKTLHGFVLILQLASSPRVWYRTADDDIYDT 240

Query: 241  VPYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLN 300
            VP DLLDDDDPWIRTTDFT  GAIGRC+++RV + PRY  KL  A++Y + +RV +  + 
Sbjct: 241  VPGDLLDDDDPWIRTTDFTQVGAIGRCHSYRVLISPRYENKLRTALDYFRMRRVQEERVR 300

Query: 301  RPPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRN 360
             PP+I NEP +G  ++DHFFCI +K+ ISFEI+FLVN+V+H+G+ NQ Q+++RFFDLLRN
Sbjct: 301  WPPRIRNEPCFGEPVSDHFFCIHHKEGISFEIMFLVNSVLHRGVFNQFQLTERFFDLLRN 360

Query: 361  QPNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITP 420
            QP +VN+A+L H+  ++RPV DA K+LKLVQEW+ KNP LL   ++  DI EIRRLVITP
Sbjct: 361  QPKDVNIASLKHLCTYKRPVFDAYKRLKLVQEWIQKNPKLLGSHEQSEDISEIRRLVITP 420

Query: 421  SKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSS 480
            ++AYC PPEVELSNRVLRRYK VA+RFLRVTFMDE M+ INS+V +Y+VAPIVK++TSSS
Sbjct: 421  TRAYCLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVAPIVKDLTSSS 480

Query: 481  FPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMG 540
            F QKT +F R+K IL  GF LCGRKYSFLA+S+NQLRD+SAWFFAE     V  I  WMG
Sbjct: 481  FSQKTYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKTRVSDIKTWMG 540

Query: 541  KFTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQE 600
            KF +KNVAKCAAR+G CFSSTYAT++V  + V+ ++ D+ERNGYVFSDGIGTITPDLA E
Sbjct: 541  KFKDKNVAKCAARMGLCFSSTYATVDVMPHEVDTEVPDIERNGYVFSDGIGTITPDLADE 600

Query: 601  VADKLKMDGS-PPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSW 660
            V +KLK+D    PCAYQIRYAG+KGVVA WPSK DGIRLALR SM KF S H ILEICSW
Sbjct: 601  VMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSMKKFFSKHTILEICSW 660

Query: 661  TRFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGN 720
            TRFQPGFLNRQIITLLS L VPDEIFW MQE+M+ KL+R++ DTDVAFEVLTASCAEQGN
Sbjct: 661  TRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAFEVLTASCAEQGN 720

Query: 721  AAAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEG 780
             AAIMLSAGF+P+TEPHLRGML  +R AQLWGLREK+RIFVT GRW MGC DE+G+L+ G
Sbjct: 721  TAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWLMGCLDEAGILEHG 780

Query: 781  QCFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPEL 840
            QCFIQVS P +E CFSKHGS F ETK +L VV+G V IAKNPCLHPGDVRILEAVD P+L
Sbjct: 781  QCFIQVSKPSIENCFSKHGSRFKETKTDLEVVKGYVAIAKNPCLHPGDVRILEAVDVPQL 840

Query: 841  HHLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTL 900
            HH+YDCL+FP+ G+RPHTNEASGSDLDGDLYF  WD  LIPP++KS+P M Y  AE K+L
Sbjct: 841  HHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPNRKSYPAMHYDAAEEKSL 900

Query: 901  QRKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPK 960
             R +   DI++FFA+N+ NE LGTICNAHVVHADRS++GA+DE C+ L+ELAATAVDFPK
Sbjct: 901  GRAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECLLLAELAATAVDFPK 960

Query: 961  TGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTP 1020
            TGK+V+MP HLKPKLYPDFMGKE  Q+YKS KILG++YRR+++ YD+D   +S E +  P
Sbjct: 961  TGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRRVKEVYDEDAEASSEE-STDP 1020

Query: 1021 GDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVS 1080
              + YD  LE+ G ED I EAW  KC YDGQL GLLGQYKV +EEEIVTGHIWSMPKY S
Sbjct: 1021 SAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYTS 1080

Query: 1081 RKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTW 1140
            +KQGELKE+LKHSY++LKK+FR+VFE   P+ E L+ +E+N LYEKKASAWY V YHP W
Sbjct: 1081 KKQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKASAWYHVTYHPEW 1140

Query: 1141 LKKSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1198
            +KKSLEL++PD      MLSF WIAADYLARIKI+ R   S D  KP++SLA +L+ R+
Sbjct: 1141 VKKSLELQDPDESSHAAMLSFAWIAADYLARIKIRSREMGSIDSAKPVDSLAKFLAQRL 1196

[Close]
BLAST of Csa2G381730 vs. Swiss-Prot
Match: SHL2_ORYSJ (Probable RNA-dependent RNA polymerase SHL2 OS=Oryza sativa subsp. japonica GN=SHL2 PE=2 SV=1)

HSP 1 Score: 1397.1 bits (3615), Expect = 0.0e+00
Identity = 689/1200 (57.42%), Postives = 875/1200 (72.92%), Query Frame = 1 

Query: 9    IVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEV----SNVAN 68
            +V TQVS GGFD+ V A DL  +LE E+GLV RCR+KTSWTPP+SYPDF +    ++ + 
Sbjct: 27   LVTTQVSLGGFDAGVAAGDLADFLEHEVGLVWRCRVKTSWTPPDSYPDFALPTAPASASA 86

Query: 69   VIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHINQRRR 128
                  Y +V PHAFVHF  P+ A  A   AG   LI   K L+ +  P+S   ++ RR 
Sbjct: 87   AAAPPRYDRVPPHAFVHFARPEGARRAADLAGETRLILRGKPLRVASAPDSSLRVS-RRS 146

Query: 129  TKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFSFKDN 188
            +  PF+  DV++++G L     F  AWRGP +G+D  VDPFDG C+  FT+DTAF+F   
Sbjct: 147  SIAPFRFPDVRLEVGALPSPGAFLAAWRGPDAGLDLSVDPFDGCCRLVFTRDTAFTFPGF 206

Query: 189  NKHTFLKCDYKMEFIVRDINQITRYT-DTSCYVILLQLTASPCIWYRTADDDIAKLVPYD 248
             +   ++CD K+EF VRD+ ++  Y  D S   +LL+L A+P + YRTADDD  + VP+D
Sbjct: 207  REVAAIRCDVKLEFPVRDVLEVRLYRLDCS---LLLRLAAAPLVHYRTADDDFHEPVPFD 266

Query: 249  LLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLN---- 308
            LLDDDDPWIRTTD T SGAIGRC  +R+S   R+  K++ A++Y++E+RV  V       
Sbjct: 267  LLDDDDPWIRTTDITPSGAIGRCGVYRISFSARFWPKMDRALDYMRERRVAIVDCGGGWG 326

Query: 309  --RPPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLL 368
              R   + +E ++G  M D FFC+ + + + F +LF+VNA++HKGIINQHQ++  FF LL
Sbjct: 327  PRRGLTVRDELEFGEPMQDVFFCLQHAEGLKFPLLFMVNALVHKGIINQHQLTPEFFSLL 386

Query: 369  RNQPNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVI 428
                  VN+AAL      + PV DAC +LK     + +NP LL  SK   D  E+RRLVI
Sbjct: 387  GRSEENVNVAALRDFWGDKFPVFDACGRLKKALNRVARNPKLLC-SKVGDDHAEVRRLVI 446

Query: 429  TPSKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITS 488
            TP++AYC PPEVE SNRVLR Y +VADRFLRVTFMDEGM+ +N++V   + APIVK++ S
Sbjct: 447  TPTRAYCLPPEVERSNRVLRHYHEVADRFLRVTFMDEGMQVLNNNVLNSFTAPIVKDLMS 506

Query: 489  SSFPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGW 548
            + F QKT ++ R++ +L  GFH+CGRKYSFLA+SSNQLRD+SAWFFAE +  +V+AI  W
Sbjct: 507  NFFQQKTTVYKRVRMLLTEGFHMCGRKYSFLAFSSNQLRDKSAWFFAEDRKTTVEAIRKW 566

Query: 549  MGKFTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLA 608
            MG+FT+KNVAK AAR+GQCFSSTYAT+ +  + V+    DV  N Y+FSDGIG ITPDLA
Sbjct: 567  MGRFTSKNVAKHAARMGQCFSSTYATVTMRPDEVDESFDDVVHNEYIFSDGIGKITPDLA 626

Query: 609  QEVADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICS 668
             EVA++L++  +PP AYQIR+AG+KGV+A W    DG RL LRPSM KFESNH +LE+ S
Sbjct: 627  LEVAERLQLTDNPPSAYQIRFAGFKGVIAVWQGHGDGTRLFLRPSMRKFESNHLVLEVVS 686

Query: 669  WTRFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQG 728
            WT+FQPGFLNRQII LLS+L+VPD IFW MQETM+S L+ +++D DVAFEVLT SCA+ G
Sbjct: 687  WTKFQPGFLNRQIIILLSSLNVPDSIFWQMQETMLSNLNNILSDRDVAFEVLTTSCADDG 746

Query: 729  NAAAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQE 788
            N AA+MLSAGFEPRTEPHL+ ML+ IR+AQL  L EKARIFV +GRW MGC DE GVL++
Sbjct: 747  NTAALMLSAGFEPRTEPHLKAMLLAIRSAQLQDLLEKARIFVPKGRWLMGCLDELGVLEQ 806

Query: 789  GQCFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPE 848
            GQCFI+ + P L   F KHGS F+ T  N  V+ GTVVIAKNPCLHPGDVRILEAVD PE
Sbjct: 807  GQCFIRATVPSLNSYFVKHGSRFSSTDKNTEVILGTVVIAKNPCLHPGDVRILEAVDVPE 866

Query: 849  LHHLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKT 908
            LHHL DCLVFP+ GERPH NEASGSDLDGDLYF TWD  LIPP KKSW PM+Y+P E K 
Sbjct: 867  LHHLVDCLVFPQKGERPHANEASGSDLDGDLYFVTWDEKLIPPGKKSWNPMDYSPPEAKQ 926

Query: 909  LQRKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFP 968
            L R++++ DI++FF KNMI+E+LG ICNAHVVHAD S++GA+DE CI L+ELAATAVDFP
Sbjct: 927  LPRQVSQHDIIDFFLKNMISENLGRICNAHVVHADLSEYGAMDEKCIHLAELAATAVDFP 986

Query: 969  KTGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFT 1028
            KTGKL  MPPHLKPK+YPDFMGKE  QSYKS KILG++YR I++A + D  + S+E+  T
Sbjct: 987  KTGKLAIMPPHLKPKVYPDFMGKEDGQSYKSEKILGRLYRSIQEASNGD--VVSQEV-CT 1046

Query: 1029 PGDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYV 1088
            P D+ YD+DLEV GA DF+A AW  KCSYD QLS LL QY+V  E E+VTGHI  + K  
Sbjct: 1047 PNDLPYDIDLEVPGASDFLASAWQCKCSYDAQLSALLSQYRVRTEAELVTGHITFLVKNS 1106

Query: 1089 SRKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPT 1148
            S+KQG++K++LK +YS L+K+F+  FE++  +  ++  DE+N LYE KASAWYQV YHP 
Sbjct: 1107 SKKQGDIKDRLKTAYSALRKEFKSTFESIASDQCEIGDDEKNLLYEMKASAWYQVTYHPK 1166

Query: 1149 WLKKSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1198
            W++KS  +  PD  E    LSF WI  DYLARIK++C      +  KP+  LA+Y+S+R+
Sbjct: 1167 WVEKSRGILGPDGEEIPASLSFAWIPVDYLARIKLRCHGKVRVEGQKPVERLAAYISERI 1218

[Close]
BLAST of Csa2G381730 vs. Swiss-Prot
Match: RDR1_ARATH (RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana GN=RDR1 PE=2 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 7.8e-158
Identity = 355/1000 (35.50%), Postives = 537/1000 (53.70%), Query Frame = 1 

Query: 193  DYKMEFIVRDINQITRYTDT--SCYVILLQLTASPCIWYRTADDDIAKLVPYDLLD---- 252
            DY++E    +I QI  ++    S   +++Q+  +P I+ +  +D    L+ + ++D    
Sbjct: 143  DYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAPKIFEK--EDQPINLL-FGIMDFYSD 202

Query: 253  -DDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIK--LNNAMNYLKEQRVHQVSLNRPPK 312
              D+ WIRTTDFT S  IG+   F + +P    +     N  NY  E R     +     
Sbjct: 203  GSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNVPDFRENFANYA-EHRASSFLIESGSS 262

Query: 313  ILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQPNE 372
              +  +  V + D          + FEILF +N ++    ++   +   F+ LL  +  +
Sbjct: 263  YSSNANTLVPVVDPPPGF----SLPFEILFKLNTLVQNACLSGPALDLDFYRLLNQK--K 322

Query: 373  VNLAALSHIHAFRRPVLDACKK-----LKLVQEWLLKNPTLLKRSKELVD-IVEIRRLVI 432
             + A + H       + + C +         ++W+ K    L  +  L D +V + R+ +
Sbjct: 323  YDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGKLPLSPTISLDDGLVYMYRVQV 382

Query: 433  TPSKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITS 492
            TP++ Y   PEV +SNRVLR Y    + FLRV+F+DE ++K+ S   +            
Sbjct: 383  TPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVRSMDLS----------PR 442

Query: 493  SSFPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGW 552
            SS  ++TK++ R+  +L+ G  +  +K+ FLA+SS+QLR+ SAW FA    I+   I  W
Sbjct: 443  SSTQRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDRITAAHIRAW 502

Query: 553  MGKFTN-KNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVE----RNGYVFSDGIGTI 612
            MG F + +NVAK AAR+GQ FSS+  T+ V  + +   + DVE       YVFSDGIG I
Sbjct: 503  MGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEV-IPDVEIISLGTRYVFSDGIGKI 562

Query: 613  TPDLAQEVADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRI 672
            + + A++VA K  +    P A+QIRY GYKGVVA  P+     +L+LR SM+KFES +  
Sbjct: 563  SAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSK--KLSLRKSMSKFESENTK 622

Query: 673  LEICSWTRFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTAS 732
            L++ +W+++QP ++NRQ+ITLLSTL V D +F   Q  ++ +LD ++T    A E L   
Sbjct: 623  LDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPLEAHEALGLM 682

Query: 733  C-AEQGNAAAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDE 792
               E  N    ++  G++P  EP L  ML   RA++L  LR K RIF++ GR  MGC DE
Sbjct: 683  APGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGGRSMMGCLDE 742

Query: 793  SGVLQEGQCFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILE 852
            +  L+ GQ  +Q S P+      + G  F        ++ G VV+AKNPCLHPGDVR+L+
Sbjct: 743  TRTLEYGQVVVQYSDPM------RPGRRF--------IITGPVVVAKNPCLHPGDVRVLQ 802

Query: 853  AVDAPELHHLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYA 912
            AV+ P L+H+ DC+VFP+ G RPH NE SGSDLDGD+YF  WD  L+PP  ++  PM+Y 
Sbjct: 803  AVNVPALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPP--RTSEPMDYT 862

Query: 913  PAEVKTLQRKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAA 972
            P   + L   +T  ++ E+FA  ++N+SLG I NAH   AD+    A  + CI+L++  +
Sbjct: 863  PEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELAKKFS 922

Query: 973  TAVDFPKTGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITS 1032
            TAVDFPKTG    +P HL  K YPDFM K    +Y+S  ++GK++R +++      +I+ 
Sbjct: 923  TAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKER--APPLISI 982

Query: 1033 RELNFTPGDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIW 1092
            +          YD D+EV G E+++ EA+ QK +YD +L  L+  Y +  E EI++G I 
Sbjct: 983  KSFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGGIM 1042

Query: 1093 SMPKYVSRKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQ 1152
             M K  ++++    E +  +   L+K+   +F             E       KASAWY 
Sbjct: 1043 RMSKSFTKRRD--AESIGRAVRALRKETLSLF----------NASEEEENESAKASAWYH 1084

Query: 1153 VAYHPTWLKKSLELREPDAPEAVPMLSFPWIAADYLARIK 1172
            V YH ++     E    D       LSF W   D L RIK
Sbjct: 1103 VTYHSSYWGLYNEGLNRD-----HFLSFAWCVYDKLVRIK 1084

[Close]
BLAST of Csa2G381730 vs. Swiss-Prot
Match: RDR2_ORYSJ (Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica GN=RDR2 PE=2 SV=1)

HSP 1 Score: 547.7 bits (1410), Expect = 3.1e-154
Identity = 366/1021 (35.85%), Postives = 537/1021 (52.60%), Query Frame = 1 

Query: 194  YKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKLVPYDLL-----DDD 253
            YK+E +  D+      T      ILLQL  +P I    +   +      D       D  
Sbjct: 155  YKLEVLFEDMKDCLGCTLDGMGAILLQLNYAPRIHTAISGPAVNSRFMDDRFHACKEDAK 214

Query: 254  DPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNRPPKILNEP 313
              W+R  DFT + + GRC+T          +KL  +       +    S N     +N  
Sbjct: 215  FSWVRALDFTPNYSFGRCSTLV--------LKLGKSALVSDILKSLPFSGNLGELTMNSM 274

Query: 314  DYGVQMTDHFFCILY-KKDIS--FEILFLVNAVMHKGIINQHQMSDRFFDLLRNQPNEVN 373
            D GV  + +   +++  +D S  +E+LF +N++MH G I    ++   F  L+  P +V+
Sbjct: 275  D-GVGASSNVVPLVHCPRDYSVPYEVLFRLNSLMHMGKIVAKHVNADLFKALQELPVDVS 334

Query: 374  LAALSHIHAFRRP-------VLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVIT 433
                  +H            +      +K     LL N    +  ++L+   +  R+ IT
Sbjct: 335  RRIFEKMHKLESTCYGPLQFIQQEAYSMKRSHNVLLSNEGEGEGERKLM---KCYRVNIT 394

Query: 434  PSKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSS 493
            PSK +CF PE E++N V++ +   A  F+RVTF+DE   K++S+  +  +     E    
Sbjct: 395  PSKIFCFGPEEEVTNYVVKHHSAYASDFVRVTFVDEDWSKLSSNAISARI-----EQGFF 454

Query: 494  SFPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWM 553
            S P KT ++ R+  ILK GF +  + + FLA+S++QLR  S W FA   S++   I  WM
Sbjct: 455  SKPFKTGLYYRILSILKKGFSIGPKNFEFLAFSASQLRGNSVWMFASNASLNAGGIRRWM 514

Query: 554  GKFTN-KNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVE----RNGYVFSDGIGTIT 613
            G F N ++V+KCAAR+GQ FSS+  T EV R  V   + D+E     + Y+FSDGIG I+
Sbjct: 515  GHFENIRSVSKCAARMGQLFSSSRQTFEVLRWDVEV-IPDIEITTDGSKYIFSDGIGKIS 574

Query: 614  PDLAQEVADKLKMDGSP-PCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRI 673
               A+ VA  + +D +  P A+QIRY GYKGV+A  P     I L+LRPSM KFES  R+
Sbjct: 575  LRFAKRVAHHVGLDPTNLPSAFQIRYGGYKGVIAIDPMSS--IDLSLRPSMKKFESESRM 634

Query: 674  LEICSWTRFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTAS 733
            L I SW++ QP ++NR+II+LLSTL + DEIF +MQ+  + + + M+T+ +VA  VL   
Sbjct: 635  LNITSWSKSQPCYVNREIISLLSTLGIRDEIFVAMQQDEMRETEEMLTNKEVALSVLGKL 694

Query: 734  CAEQGNAAAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDES 793
               +   A  ML  G+EP +EP+L  +L   +  +L  +R + +I V +GR  +GC DE+
Sbjct: 695  GGSETKTAVKMLLQGYEPSSEPYLSMILKAHQENRLTDIRTRCKIHVPKGRVLIGCLDET 754

Query: 794  GVLQEGQCFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEA 853
            GVL+ GQ +I+++    E+  S     + +     TVV G V I KNPCLHPGD+R+LEA
Sbjct: 755  GVLEYGQVYIRITKNSKEQKDSNQSYFYNDDGKTATVV-GKVAITKNPCLHPGDIRVLEA 814

Query: 854  VDAPELHHLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAP 913
            +  P+L  + DCLVFP+ GERPH NE SG DLDGDLYF TWD  LIP  +K   PM+Y  
Sbjct: 815  IYDPDLVGMVDCLVFPQRGERPHPNECSGGDLDGDLYFITWDDKLIP--EKVDTPMDYTA 874

Query: 914  AEVKTLQRKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAAT 973
               + +   +T  +I + F   MIN+SLG I  AH++HADRS   A    C+QL+ L + 
Sbjct: 875  TRPRIMDHVVTLEEIQKHFVDYMINDSLGAISTAHLIHADRSPLKARSPECLQLATLHSM 934

Query: 974  AVDFPKTGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRI---RDAYDDDDMI 1033
            AVDF KTG    MP  L+P+ YPDFM +     Y S  +LGK+YR      +   D   +
Sbjct: 935  AVDFAKTGAPAEMPRTLRPREYPDFMERWEKPMYISNGVLGKLYRSAMGHMEKSGDSGAL 994

Query: 1034 TSRELNFTPGDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGH 1093
            +S     +P    YD DLEV G+++F+  A +    Y+ +L+ L+  Y+   E+EI+TG+
Sbjct: 995  SSSSAQPSP---TYDPDLEVPGSDEFLQAAEEYYELYEEKLTTLMNYYRAELEDEILTGN 1054

Query: 1094 IWSMPKYVSR---KQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKA 1153
            I +   Y+ R   +  E+K+++  +   L ++ R            L    +     + A
Sbjct: 1055 IRNKMLYLKRDNKRYFEMKDRIVAAVDALHREAR----------GWLLSSRKEEDASRMA 1114

Query: 1154 SAWYQVAYHPTWLKKSLELREPDAPEAVPMLSFPWIAADYLARIK----IKCRRTKSFDP 1184
            SAWY+V YH            PD        SFPWIA D L  IK    ++ RR K  D 
Sbjct: 1115 SAWYRVTYH------------PDRRRGKRFWSFPWIACDNLLAIKASSQLRRRRQKDDDS 1127

[Close]
BLAST of Csa2G381730 vs. Swiss-Prot
Match: RDR1_ORYSJ (Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica GN=RDR1 PE=2 SV=2)

HSP 1 Score: 532.7 bits (1371), Expect = 1.0e-149
Identity = 310/770 (40.26%), Postives = 449/770 (58.31%), Query Frame = 1 

Query: 420  SKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSS 479
            S  Y + PE+ +SNRV+R +    + FLR++F+DE  +K+ +         +     S  
Sbjct: 7    STVYFYGPEINVSNRVVRNFSSDIENFLRISFVDEDCEKLRA-------TDLSPRSASGH 66

Query: 480  FPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMG 539
               +T ++ R+  +L  G  + G+ + FLA+SS+QLRD SAW FA  + ++   I  WMG
Sbjct: 67   DANRTALYKRVLSVLSDGITIGGKNFEFLAFSSSQLRDNSAWMFASRQGLAASDIRTWMG 126

Query: 540  KFTN-KNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNG--YVFSDGIGTITPDL 599
             F N +NVAK AAR+GQ FSS+  T++V +  V  ++SD+ +NG  +VFSDGIG I+   
Sbjct: 127  DFRNIRNVAKYAARLGQSFSSSTETLKVQKYEVE-EISDI-KNGTQHVFSDGIGKISSAF 186

Query: 600  AQEVADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEIC 659
            A EVA K  +    P A+QIRY GYKGVVA  P+ +   +L+LR SM KF+S++  +++ 
Sbjct: 187  ANEVAMKCNLKRFAPSAFQIRYGGYKGVVAVDPTSR--WKLSLRKSMLKFQSDNITVDVL 246

Query: 660  SWTRFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTAS-CAE 719
            +++++QPGFLNRQ+ITLLSTL V D +F   QE  +++L++M+TD   A E +      E
Sbjct: 247  AYSKYQPGFLNRQLITLLSTLGVRDSVFEQKQEEAVNQLNKMVTDPQAAIEAIELMPMGE 306

Query: 720  QGNAAAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVL 779
              NA   +L  G++P  EP+L  +L   RA++L  L+ K+RI + +GR  MGC DE+  L
Sbjct: 307  ITNAVKELLLCGYQPDDEPYLSMLLQTFRASKLLELKTKSRILIPKGRAMMGCLDETRTL 366

Query: 780  QEGQCFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDA 839
            + GQ FI+ ++ + +              N+   V G VVIAKNPCLHPGD+RIL AVD 
Sbjct: 367  KYGQVFIRATSGVND--------------NDRFTVTGKVVIAKNPCLHPGDIRILHAVDV 426

Query: 840  PELHHLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEV 899
            P LHH+++C+VFP+ G RPH NE SGSDLDGD+YF +WD +LIPP  +   PM+Y PA  
Sbjct: 427  PVLHHMFNCVVFPQQGPRPHPNECSGSDLDGDIYFVSWDPSLIPP--RMVTPMDYTPAPT 486

Query: 900  KTLQRKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVD 959
            +TL   +T  ++ E+F   ++NESLG I NAHVV AD+    A    CI+L++L + AVD
Sbjct: 487  ETLDHDVTIEEVEEYFTNYIVNESLGMIANAHVVFADKEDLKAESSPCIELAKLFSIAVD 546

Query: 960  FPKTGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELN 1019
            FPKTG    +PP L  K YPDFM K    +Y+S  ++GK+YR I+         T RE+ 
Sbjct: 547  FPKTGVPALIPPELHVKEYPDFMEKLDKVTYESKGVIGKLYREIKKHTPHIKHFT-REV- 606

Query: 1020 FTPGDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPK 1079
                   YD D+ V G ED+I EA   K  YD +L  L+  Y +  E EI++G I  M K
Sbjct: 607  ---ARRSYDTDMIVDGYEDYITEAMALKDEYDFKLGNLMDHYGIKSEAEIISGCILKMAK 666

Query: 1080 YVSRKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDER---NALYEKKASAWYQV 1139
              ++K     + ++ +  +L+K+ R         F +++ D+    +   E KASAWY V
Sbjct: 667  NFTKKSD--ADAIRLAVRSLRKEARS-------RFSEMSLDDNGHGHDASEAKASAWYHV 726

Query: 1140 AYHPTWLKKSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDP 1183
             YHP +     E       E    +SFPW   + L RIK + +  +   P
Sbjct: 727  TYHPEFWGCYNE-----GYERPHFISFPWCIYEKLLRIKQRRKFVRKMQP 730

[Close]
BLAST of Csa2G381730 vs. TrEMBL
Match: A0A067KP71_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07170 PE=4 SV=1)

HSP 1 Score: 1830.8 bits (4741), Expect = 0.0e+00
Identity = 872/1198 (72.79%), Postives = 1016/1198 (84.81%), Query Frame = 1 

Query: 1    MGSEEGEK-IVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEV 60
            M +++ EK  VVTQVSFGGFD+ VKA+DL++YLE EIG V RCRLKTSWTPPESYP+FE+
Sbjct: 1    METQKSEKDTVVTQVSFGGFDNHVKAKDLVAYLEEEIGQVWRCRLKTSWTPPESYPNFEI 60

Query: 61   SNVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHI 120
            ++ A + ++ +YK+V PHAFVHF S +SA  A +AAG  EL  ND+ LK SLGPE+PFH+
Sbjct: 61   TDAAAIHRTHEYKRVEPHAFVHFASAESATWAKNAAGHCELFLNDRPLKVSLGPENPFHL 120

Query: 121  NQRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAF 180
            NQRRR  +PFKLSDV ++IG L   D F V WRGPSSG+DFLVDPFDGTCKFCFT DTAF
Sbjct: 121  NQRRRKNIPFKLSDVCIEIGTLVSRDEFLVGWRGPSSGVDFLVDPFDGTCKFCFTMDTAF 180

Query: 181  SFKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKL 240
            S KD  KH  ++CD+K+EF+VRDIN++ +YTDTSC VILLQL ++P +WYRTADDDI   
Sbjct: 181  SIKDTTKHAIIRCDFKLEFLVRDINEVKQYTDTSCIVILLQLASAPLVWYRTADDDIEVS 240

Query: 241  VPYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLN 300
            VP+DLLDDDDPWIRTTDFT SGAIGRCN +RVS+PPR+G KL  A N+LKE+RV + SL 
Sbjct: 241  VPFDLLDDDDPWIRTTDFTPSGAIGRCNFYRVSIPPRHGAKLKRARNFLKERRVQEDSLR 300

Query: 301  RPPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRN 360
            RP KI+NEPDYG+ M+D FFCI +K+ I+FEI+FLVNAVMHKGI NQHQ+SD FFDLLRN
Sbjct: 301  RPLKIVNEPDYGMPMSDPFFCIHHKEGIAFEIMFLVNAVMHKGIFNQHQLSDNFFDLLRN 360

Query: 361  QPNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITP 420
            Q  ++N+AAL HI ++++PV DA K LK VQEWLLKNP L KRSK+L DIVEIRRL +TP
Sbjct: 361  QSLDINVAALKHICSYKQPVFDAHKGLKAVQEWLLKNPKLFKRSKQLDDIVEIRRLALTP 420

Query: 421  SKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSS 480
            ++AYC PPEVELSNRVLR+YK++ADRFLRVTFMDEG++ IN++  TYYVAPIV++ITS+S
Sbjct: 421  TRAYCLPPEVELSNRVLRKYKNIADRFLRVTFMDEGLQTINANTLTYYVAPIVRDITSTS 480

Query: 481  FPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMG 540
            F QKT+IF R+K IL  GF+LCGR+YSFLA+SSNQLRD+SAWFFAE   ISV  I  WMG
Sbjct: 481  FSQKTRIFRRVKSILTDGFNLCGRRYSFLAFSSNQLRDRSAWFFAEDGKISVGQIRKWMG 540

Query: 541  KFTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQE 600
            +FTN+N+AKCAAR+GQCFSSTYAT+EVP + VNH L D+ERNGY+FSDGIGTITPDLA+E
Sbjct: 541  RFTNRNIAKCAARMGQCFSSTYATVEVPSSEVNHALPDIERNGYIFSDGIGTITPDLAKE 600

Query: 601  VADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWT 660
            VA+KLK+D + PCAYQIRYAG KGVVA WP++ DGIRL+LRPSMNKF+SNH  LEICSWT
Sbjct: 601  VAEKLKLDINLPCAYQIRYAGCKGVVACWPAQGDGIRLSLRPSMNKFQSNHTTLEICSWT 660

Query: 661  RFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNA 720
            RFQPGFLNRQIITLLSTL+V DE+FW MQ  M+SKL++M+TD DVAF+V+T SCAEQGN 
Sbjct: 661  RFQPGFLNRQIITLLSTLNVSDEVFWEMQTAMVSKLNKMLTDADVAFDVITKSCAEQGNT 720

Query: 721  AAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQ 780
            AAIMLSAGF+P+ EPHLRGML CIRAAQ WGLREKARIFVT GRW MGC DE GVL++GQ
Sbjct: 721  AAIMLSAGFKPQNEPHLRGMLTCIRAAQFWGLREKARIFVTSGRWLMGCLDELGVLEQGQ 780

Query: 781  CFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELH 840
            CFIQVS P LE CFSKHGS F+ETK NL V++GTVVIAKNPCLHPGDVRILEAVDAP LH
Sbjct: 781  CFIQVSNPCLETCFSKHGSKFSETKKNLQVIKGTVVIAKNPCLHPGDVRILEAVDAPGLH 840

Query: 841  HLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQ 900
            HL+DCLVFP+ G+RPHTNEASGSDLDGDLYF TWD NLIPPSKKSW PM+Y  AE K L 
Sbjct: 841  HLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDDNLIPPSKKSWTPMQYDAAEAKLLN 900

Query: 901  RKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKT 960
            R ++  DI++FFAKNM+NE+LG ICNAHVVHAD S+HGALDENCI+L+ELAATAVDFPKT
Sbjct: 901  RPVSHQDIIDFFAKNMVNENLGAICNAHVVHADLSEHGALDENCIKLAELAATAVDFPKT 960

Query: 961  GKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPG 1020
            GKLVTMPP+LKPK+YPDFMGKE  QSYKSTKILG++YR+I DAY DDD     ELN   G
Sbjct: 961  GKLVTMPPYLKPKMYPDFMGKEEYQSYKSTKILGRLYRQIIDAYGDDDAAAFSELNCLSG 1020

Query: 1021 DVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSR 1080
            D+ YD DLEV G+ D+I EAWDQKCSYDGQL GLLGQYKV REEE+VTGHIWSMP   SR
Sbjct: 1021 DIPYDADLEVLGSADYILEAWDQKCSYDGQLKGLLGQYKVKREEELVTGHIWSMPMSNSR 1080

Query: 1081 KQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWL 1140
            KQG+LKE+LKHSYS LKK+FRQVFE +  + EQLT DE+N  YE+KASAWYQVAYHP W+
Sbjct: 1081 KQGDLKERLKHSYSALKKEFRQVFEGMNLDVEQLTDDEKNLQYERKASAWYQVAYHPKWI 1140

Query: 1141 KKSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1198
            KKSLEL+E DAP    MLSF WIAADYLARIKIK R T+  D  KP+NSL  YL+DR+
Sbjct: 1141 KKSLELQESDAPGNATMLSFSWIAADYLARIKIKRRGTEGIDTAKPVNSLVKYLTDRI 1198

[Close]
BLAST of Csa2G381730 vs. TrEMBL
Match: B9RP51_RICCO (RNA-dependent RNA polymerase, putative OS=Ricinus communis GN=RCOM_0924060 PE=4 SV=1)

HSP 1 Score: 1786.5 bits (4626), Expect = 0.0e+00
Identity = 849/1196 (70.99%), Postives = 995/1196 (83.19%), Query Frame = 1 

Query: 7    EKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVSNVANVI 66
            ++ VVTQVSFGGFD DV ARDL++YL++EIG V RCRLKTSWTPPESYP+FE+++ A + 
Sbjct: 8    KETVVTQVSFGGFDKDVTARDLVAYLDNEIGQVWRCRLKTSWTPPESYPNFEITDTAVIQ 67

Query: 67   KSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHINQRRRTK 126
            + D Y++V PHAFVHF SPDSA  A +AAG  EL FN + +K SLGPE+PFH+NQRRRT 
Sbjct: 68   RVDAYRRVEPHAFVHFASPDSATWAKNAAGHCELFFNGRPVKVSLGPENPFHLNQRRRTT 127

Query: 127  VPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFSFKDNNK 186
            +PFKLSDV V+IG L   D F V WRGP SG+DFLVDPFDG CKFCFT+DTAFSFK   +
Sbjct: 128  IPFKLSDVHVEIGTLVSRDEFLVGWRGPPSGVDFLVDPFDGKCKFCFTRDTAFSFKGTTE 187

Query: 187  HTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKLVPYDLLD 246
            H  ++CD+K+EF+VRDIN+I +YTDTSC VILLQL ++P +WYRTADDDI  LVP+DLLD
Sbjct: 188  HAVIRCDFKLEFLVRDINEIKQYTDTSCLVILLQLASAPSVWYRTADDDIEVLVPFDLLD 247

Query: 247  DDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNRPPKILN 306
            DDDPWIRTTDFT SGAIGRCN++RVS+PPR+G KL  A+N+L+E+RV +  L RP  +  
Sbjct: 248  DDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGAKLKRALNFLRERRVQEDCLRRPLHVTA 307

Query: 307  EPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQPNEVNL 366
            EP+Y + M+D FFCI +++ + F ++FLVNAVMHKGI NQHQ+SD FFDLLRNQP +VN+
Sbjct: 308  EPEYEMPMSDPFFCIHHEEGVDFNLMFLVNAVMHKGIFNQHQLSDSFFDLLRNQPLDVNI 367

Query: 367  AALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPSKAYCFP 426
            AAL HI +++ PV DA K+LK VQ+WLLKNP L + SK+L DIVEIRRL ITP++AYC P
Sbjct: 368  AALRHICSYKHPVFDAHKRLKAVQQWLLKNPKLFRSSKQLDDIVEIRRLAITPTRAYCLP 427

Query: 427  PEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSFPQKTKI 486
            PEVELSNRVLRRYKD+AD+FLRVTFMDEG++ +N++  TYY APIV++ITS+SF QKT+I
Sbjct: 428  PEVELSNRVLRRYKDIADQFLRVTFMDEGLQTMNANTLTYYCAPIVRDITSNSFSQKTRI 487

Query: 487  FARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGKFTNKNV 546
            F R+K IL  GF+LCGRKYSFLA+SSNQLRD+SAWFFAE    SV  I  WMGKFTN+N+
Sbjct: 488  FKRVKSILTDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDGKTSVSKIRNWMGKFTNRNI 547

Query: 547  AKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEVADKLKM 606
            AKCAAR+GQCFSSTYAT+EVP      DL D+ERN Y+FSDGIG ITPDLA+EVA+KLK+
Sbjct: 548  AKCAARMGQCFSSTYATVEVPSAEAILDLPDIERNNYIFSDGIGMITPDLAKEVAEKLKL 607

Query: 607  DGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTRFQPGFL 666
            + +PPCAYQIRYAG KGVVA WP+  DGIRL+LR SMNKF SNH  LEICSWTRFQPGFL
Sbjct: 608  EVNPPCAYQIRYAGCKGVVACWPAHIDGIRLSLRVSMNKFHSNHTTLEICSWTRFQPGFL 667

Query: 667  NRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAAAIMLSA 726
            NRQIITLLSTL VPDEIFW MQ  M+SKL++M  D DVAF+V+TASCAEQGN AAIMLSA
Sbjct: 668  NRQIITLLSTLDVPDEIFWKMQIVMVSKLNQMFMDADVAFDVVTASCAEQGNTAAIMLSA 727

Query: 727  GFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQCFIQVST 786
            GF P+TEPHL GML CIRAAQLWGLREK RIFV  GRW MGC DE GVL+ GQCFIQVS 
Sbjct: 728  GFNPKTEPHLCGMLTCIRAAQLWGLREKTRIFVPSGRWLMGCLDELGVLEHGQCFIQVSN 787

Query: 787  PLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHHLYDCLV 846
            P LE CF KHGS F+E+K  L VV+GTVV+AKNPCLHPGD+RILEAVDAPELHHL+DCLV
Sbjct: 788  PSLESCFWKHGSRFSESKKKLQVVKGTVVVAKNPCLHPGDIRILEAVDAPELHHLHDCLV 847

Query: 847  FPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQRKITRWD 906
            FP+ G+RPHTNEASGSDLDGDLYF TWD NLIPPSK+SW PM+Y  AE K L R +   D
Sbjct: 848  FPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWLPMQYDAAEAKQLNRPVNHQD 907

Query: 907  IMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTGKLVTMP 966
            I++FFAKNM+NE+LG ICNAHVVHAD S++GALDENCI+L+ELAATAVDFPKTGKLVTMP
Sbjct: 908  IIDFFAKNMVNENLGAICNAHVVHADLSEYGALDENCIKLAELAATAVDFPKTGKLVTMP 967

Query: 967  PHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAY-----DDDDMITSRELNFTPGDV 1026
            PHLKPKLYPDFMGKE  QSY S KILG++YR+++D Y     DDDD  TS ELN   GD+
Sbjct: 968  PHLKPKLYPDFMGKEDYQSYNSNKILGRLYRQVKDDYNDDDDDDDDAATSSELNLVRGDI 1027

Query: 1027 HYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRKQ 1086
             YD DLEV+G+ D+I +AWDQKCSYDGQL GLL QYKV REEE+VTGHIWSMPK  SRKQ
Sbjct: 1028 PYDKDLEVSGSSDYILDAWDQKCSYDGQLKGLLAQYKVKREEEVVTGHIWSMPKCNSRKQ 1087

Query: 1087 GELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLKK 1146
            GELKE+LK SY +LKK+FRQVFE +  +FEQLT DE+N LYE+KASAWYQVAYHP W+ K
Sbjct: 1088 GELKERLKQSYHSLKKEFRQVFEKMDSDFEQLTEDEKNLLYEQKASAWYQVAYHPKWVNK 1147

Query: 1147 SLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1198
            S+EL+EPDA     MLSF WIAADYLARIKI+CR     D +KP+NSL  YL+DR+
Sbjct: 1148 SMELQEPDAAGCASMLSFAWIAADYLARIKIRCRGFDGVDTSKPVNSLVKYLADRI 1203

[Close]
BLAST of Csa2G381730 vs. TrEMBL
Match: B9IKW9_POPTR (SILENCING DEFECTIVE 1 family protein OS=Populus trichocarpa GN=POPTR_0018s01670g PE=4 SV=1)

HSP 1 Score: 1783.5 bits (4618), Expect = 0.0e+00
Identity = 842/1194 (70.52%), Postives = 1008/1194 (84.42%), Query Frame = 1 

Query: 7    EKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVSNVANVI 66
            ++ VVTQVS GGFD  V A+DL+ YL+  IGLV RCRLKTSWTPPESYP+FE++++  + 
Sbjct: 8    KETVVTQVSVGGFDIHVTAKDLLEYLDRAIGLVWRCRLKTSWTPPESYPNFEITDITKIE 67

Query: 67   KSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHINQRRRTK 126
            +++DY++VVPHAFVHF  P SA  A++A+GR EL  N+K LK SLGP++PF +NQRRRT 
Sbjct: 68   RTEDYRRVVPHAFVHFALPQSATLAMNASGRCELFLNNKALKVSLGPKNPFTLNQRRRTT 127

Query: 127  VPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFSFKDNNK 186
             PFKLSDV  +IGNL   D F V WRGP SG+DFLVDPFDGTCKFCF+++TAFS K  ++
Sbjct: 128  TPFKLSDVGFEIGNLVSRDEFFVGWRGPPSGVDFLVDPFDGTCKFCFSRNTAFSLKSTSE 187

Query: 187  HTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKLVPYDLLD 246
            H  +KCD+K+EF+VRDIN+I +YT+TSC V+LLQL ++P +WYRTADDDI   VP+DLLD
Sbjct: 188  HAVIKCDFKVEFLVRDINEIIQYTETSCLVLLLQLASAPWVWYRTADDDIEAWVPFDLLD 247

Query: 247  DDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVH---QVSLNRPPK 306
            DDDPWIRTTDFT SGAIGRC+++RVS+PPR+G KL  A+ YLKE+RV    + +  R  +
Sbjct: 248  DDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGSKLRKAVKYLKERRVQVLQEENHRRRIR 307

Query: 307  ILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQPNE 366
            IL+EPD+G+ M+D FFCI +K+ I+FE+LFLVNAVMHKGI NQHQ+S+ FFDLLRNQ  E
Sbjct: 308  ILDEPDFGMPMSDPFFCIHHKEGIAFEVLFLVNAVMHKGIFNQHQLSNDFFDLLRNQHTE 367

Query: 367  VNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPSKAY 426
            VN++AL HI  +RRPV +A ++LK VQEWLLKNP L K  K+L D+VEIRRLVITP+KAY
Sbjct: 368  VNVSALKHICTYRRPVFNAYRRLKAVQEWLLKNPNLFKNPKQLGDVVEIRRLVITPTKAY 427

Query: 427  CFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSFPQK 486
            C PPEVELSNRVLR+YKDVADRFLRVTFMDEG++++NS+V  YYVAPIV++ITS+SFPQK
Sbjct: 428  CLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQRMNSNVLNYYVAPIVRDITSNSFPQK 487

Query: 487  TKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGKFTN 546
            T+IF R++ IL  GF+LCGR+YSFLA+S+NQLRDQSAWFF+E ++ISV  +  WMGKFTN
Sbjct: 488  TRIFKRVRSILTEGFYLCGRRYSFLAFSANQLRDQSAWFFSEERNISVLDVKSWMGKFTN 547

Query: 547  KNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEVADK 606
            +N+AKCAAR+GQCFSSTYATIEVP   VN DL D+ERNGYVFSDGIG ITPDLA+EVA+K
Sbjct: 548  RNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIERNGYVFSDGIGIITPDLAREVAEK 607

Query: 607  LKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTRFQP 666
            LK+D  PPCAYQIRYAG KGVVA WP K DG+RL+LRPSMNKF+SNH  LEICSWTRFQP
Sbjct: 608  LKLDIDPPCAYQIRYAGCKGVVACWPGKGDGVRLSLRPSMNKFQSNHTTLEICSWTRFQP 667

Query: 667  GFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAAAIM 726
            GFLNRQIITLLSTL+VPD +FW MQETM+SKL++M  ++DVAF+VLTASCA+QGN AAIM
Sbjct: 668  GFLNRQIITLLSTLNVPDAVFWKMQETMVSKLNQMFVNSDVAFDVLTASCADQGNVAAIM 727

Query: 727  LSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQCFIQ 786
            LSAGF+P  EPHLRGML C+RAAQLW LREK RIFV  GRW MGC DE G+L++GQCFIQ
Sbjct: 728  LSAGFKPDREPHLRGMLTCVRAAQLWDLREKTRIFVPSGRWLMGCLDELGMLEQGQCFIQ 787

Query: 787  VSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHHLYD 846
            VS   LEKCF KHG+ F+E + NL V++GTVVIAKNPCLHPGDVR+LEAVD P LHHLYD
Sbjct: 788  VSNSSLEKCFMKHGAKFSEAEKNLQVIKGTVVIAKNPCLHPGDVRVLEAVDVPGLHHLYD 847

Query: 847  CLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQRKIT 906
            CLVFP+ GERPHTNEASGSDLDGDLYF TWD NLIPPSK+SW PM+Y  AE K L R + 
Sbjct: 848  CLVFPQKGERPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKLLARPVN 907

Query: 907  RWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTGKLV 966
              DI+EFFAKNM+N++LG ICNAHVVHAD S++GA D+NC+ L+ELAATAVDFPKTGK+V
Sbjct: 908  HQDIIEFFAKNMVNDNLGAICNAHVVHADLSEYGATDKNCLTLAELAATAVDFPKTGKVV 967

Query: 967  TMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGDVHY 1026
            +MPP+LKPK+YPDFMGKE  QSYKS KILG++YR+I+DAY D+D+  S ELN  PGD+ Y
Sbjct: 968  SMPPYLKPKMYPDFMGKEEYQSYKSEKILGRLYRQIKDAY-DEDVAASSELNLVPGDIPY 1027

Query: 1027 DVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRKQGE 1086
            D DLEV GA D+I++AWDQKCSYDGQL+GLL QYKV REEE+VTGHIWSMPKY SRKQGE
Sbjct: 1028 DSDLEVVGASDYISDAWDQKCSYDGQLNGLLSQYKVKREEEVVTGHIWSMPKYSSRKQGE 1087

Query: 1087 LKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLKKSL 1146
            LK++LKHSY++LKK+FRQ+FE +  EFEQL   E+N LYE+KASAWYQV YHP W+KKSL
Sbjct: 1088 LKDRLKHSYNSLKKEFRQIFEKMDLEFEQLEDGEKNKLYEQKASAWYQVVYHPHWVKKSL 1147

Query: 1147 ELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1198
            EL++PD      MLSF WIAADYLARIKI+ R T + D  KP+NSLA YL+DRM
Sbjct: 1148 ELQDPDGAGTSVMLSFAWIAADYLARIKIRHRETGNVDSAKPVNSLAKYLADRM 1200

[Close]
BLAST of Csa2G381730 vs. TrEMBL
Match: A0A067L2C2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03988 PE=4 SV=1)

HSP 1 Score: 1783.1 bits (4617), Expect = 0.0e+00
Identity = 857/1198 (71.54%), Postives = 1004/1198 (83.81%), Query Frame = 1 

Query: 1    MGSEEGEK-IVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEV 60
            MG+E  EK  VVTQVSFGGF++ V A+DL++YLE  IG V RCRLKTSWTPPESYP+F++
Sbjct: 1    MGTERSEKDTVVTQVSFGGFENHVNAKDLVAYLEEVIGQVWRCRLKTSWTPPESYPNFKI 60

Query: 61   SNVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHI 120
            ++ A + ++++YK+V PHAFVHF   +SA  A +AAGR EL  ND+ LK SLGPE+PF +
Sbjct: 61   TDTAGIHRTNEYKRVEPHAFVHFALAESATWAKNAAGRCELFLNDRPLKVSLGPENPFTL 120

Query: 121  NQRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAF 180
            NQRRR  +P KLSDV ++IG +   D F V WRGP SG+DFLVDPFDGTCKFCFT+DTAF
Sbjct: 121  NQRRRKTIPSKLSDVCIEIGMMVSRDEFLVGWRGPPSGVDFLVDPFDGTCKFCFTRDTAF 180

Query: 181  SFKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKL 240
            S KD NKH  ++CD+K+EF+VRDIN+I +Y DTS  VILLQL ++P +WYRTADDDI  L
Sbjct: 181  SIKDTNKHAVIRCDFKLEFLVRDINEIKQYKDTSYLVILLQLASAPWVWYRTADDDIEVL 240

Query: 241  VPYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLN 300
            VP++LLDDDDPWIRTTDFT SGAIGRCN++RVS+PPR+G KL  A+NYLKE+RV   SL 
Sbjct: 241  VPFNLLDDDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGAKLERAINYLKERRVQVDSLR 300

Query: 301  RPPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRN 360
            RP KILNEPDYG+ M+D FFCI  K+ I+FEI+FLVNAVMHKGI NQHQ+SD FFDLLRN
Sbjct: 301  RPLKILNEPDYGMPMSDPFFCIHRKEGIAFEIVFLVNAVMHKGIFNQHQLSDDFFDLLRN 360

Query: 361  QPNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITP 420
            QP ++N+AAL HI +++RPV DA ++LK VQEWLLKNP L K  K+L DIV+IRRL ITP
Sbjct: 361  QPADINVAALKHICSYKRPVFDAHRRLKAVQEWLLKNPKLFKCPKQLDDIVQIRRLAITP 420

Query: 421  SKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSS 480
            ++AYC PPE+ELSNRVLR+YK+ ADRFLRVTFMDEG++ IN++  TYYVAPIV++ITS+S
Sbjct: 421  TRAYCLPPEIELSNRVLRKYKNFADRFLRVTFMDEGLQTINANTLTYYVAPIVRDITSTS 480

Query: 481  FPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMG 540
            F QKT+IF R+K IL  GF+LCGR+YSFLA+SSNQLRD+SAWFFAE   I VD I  WMG
Sbjct: 481  FSQKTRIFKRVKSILTDGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDGKIRVDQIRKWMG 540

Query: 541  KFTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQE 600
            KFTNKN+AKCAAR+GQCFSSTYAT+EVP   VN    D+ERNGY FSDGIG ITPDLA+ 
Sbjct: 541  KFTNKNIAKCAARMGQCFSSTYATVEVPSAEVNLAHPDIERNGYTFSDGIGMITPDLAKA 600

Query: 601  VADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWT 660
            VA+KLK+D +PPCAYQIRYAG KGVVA WP++ DGIRL+LRPSMNKF+SNH  LEICSWT
Sbjct: 601  VAEKLKLDINPPCAYQIRYAGCKGVVACWPAQGDGIRLSLRPSMNKFQSNHTTLEICSWT 660

Query: 661  RFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNA 720
            RFQPGFLNRQIITLLSTL+V DEIFW MQ  M+SKL++M+TD DVAF+V+TASC EQGN 
Sbjct: 661  RFQPGFLNRQIITLLSTLNVSDEIFWKMQIAMVSKLNKMLTDADVAFDVITASCTEQGNT 720

Query: 721  AAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQ 780
            AA+MLSAGF+P+ EPHLRGML CIRAAQ   LREKARIFV+ GRW MGC DE GVL++GQ
Sbjct: 721  AALMLSAGFKPQNEPHLRGMLTCIRAAQFCDLREKARIFVSSGRWLMGCLDELGVLEQGQ 780

Query: 781  CFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELH 840
            CFIQVS P LE CFSKHGS F+ETK NL V+ GTVVIAKNPCLHPGDVRILEAVDAP L 
Sbjct: 781  CFIQVSNPSLETCFSKHGSRFSETKKNLQVITGTVVIAKNPCLHPGDVRILEAVDAPGLC 840

Query: 841  HLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQ 900
            HL+DCLVFP+ G+RPHTNEASGSDLDGDLYF TWD NLIPPSK+SW PM+Y  AE K L 
Sbjct: 841  HLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKQSWTPMQYDAAEPKLLS 900

Query: 901  RKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKT 960
            R ++  DI++FFAKNM+NESLG ICNAHVV AD S++GALDENCI+L+ELAATAVDFPKT
Sbjct: 901  RPVSHQDIIDFFAKNMVNESLGAICNAHVVRADLSEYGALDENCIKLAELAATAVDFPKT 960

Query: 961  GKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPG 1020
            GKLVT+P +LKPK+YPDFMGKE  QSYKSTKILG++YR I+DAY DDD   S ELN + G
Sbjct: 961  GKLVTLPQYLKPKMYPDFMGKEEYQSYKSTKILGRLYRDIKDAYGDDDAAASSELNCSSG 1020

Query: 1021 DVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSR 1080
            D+ YD +LEV G+ D+I EAWDQKCSYDGQL GLLGQYKV +EEE+VTGHIWSMP Y SR
Sbjct: 1021 DIPYDTNLEVLGSADYILEAWDQKCSYDGQLKGLLGQYKVKKEEELVTGHIWSMPMYNSR 1080

Query: 1081 KQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWL 1140
            K GELKE+LKHSYS LKK+FRQVFE +  +FEQLT DE+N LYE+KASAWYQV YHP W+
Sbjct: 1081 KLGELKERLKHSYSALKKEFRQVFEKMDLDFEQLTDDEKNLLYERKASAWYQVTYHPKWI 1140

Query: 1141 KKSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1198
            KKSLEL+EPDA     +LSF WIAADYLARIKIK R T+  D  KP+NSL  YL+DR+
Sbjct: 1141 KKSLELQEPDAAGNATILSFAWIAADYLARIKIKHRGTEGVDTAKPVNSLVKYLADRI 1198

[Close]
BLAST of Csa2G381730 vs. TrEMBL
Match: M5XL37_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000422mg PE=4 SV=1)

HSP 1 Score: 1776.9 bits (4601), Expect = 0.0e+00
Identity = 853/1197 (71.26%), Postives = 1007/1197 (84.13%), Query Frame = 1 

Query: 2    GSEEGEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVSN 61
            GSE G   VVTQVSFGGF    +A+DL++YLE EIGLV RCRLKTSWTPPES+P+FE+ N
Sbjct: 5    GSENGS--VVTQVSFGGFQHHARAKDLVTYLEDEIGLVYRCRLKTSWTPPESFPNFEI-N 64

Query: 62   VANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHINQ 121
             A+V ++DDY +V PHAFVHFVSPDS   A+ AAGR EL FN++ LK SLGPE+P+ +N+
Sbjct: 65   TADVKRTDDYSRVEPHAFVHFVSPDSVTFAMDAAGRCELFFNNEPLKVSLGPENPYFLNR 124

Query: 122  RRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFSF 181
            RRRTK PFKLSDV V+IG+L   D F  +WRGP  G+DF+VDPFDGTCKFCFT DTAFSF
Sbjct: 125  RRRTKTPFKLSDVHVEIGSLVRQDEFFASWRGPPYGVDFIVDPFDGTCKFCFTMDTAFSF 184

Query: 182  KDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKLVP 241
            K   KH  +KCD+K+EF+VR+I +I +YTDTS  VILL+LT+SP + YRTADDDI + VP
Sbjct: 185  KGTKKHAVIKCDFKVEFLVREIAEIKQYTDTSYLVILLRLTSSPWVSYRTADDDIDQSVP 244

Query: 242  YDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNRP 301
            +DLLDDDDPWIRTTDFT SGAIGRCN++RV +PPR+G KL  AMNYL+E+RV +V +  P
Sbjct: 245  FDLLDDDDPWIRTTDFTPSGAIGRCNSYRVLIPPRHGAKLKKAMNYLRERRVKEVCIKWP 304

Query: 302  PKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQP 361
            PKI +EPD+G+  T+ FF I Y++ ISFEI+FLVNAVMHKG +NQHQ+SD FF LLR+QP
Sbjct: 305  PKIQDEPDFGMSNTEPFFSIQYEEGISFEIMFLVNAVMHKGTVNQHQLSDSFFHLLRSQP 364

Query: 362  NEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPSK 421
             E+N+AAL H+ ++R PV DAC++LK+VQ+WLLKNP L+K  K L DI E+RRLVITP+K
Sbjct: 365  KEINVAALKHLCSYRSPVFDACERLKVVQDWLLKNPKLVKDPKRLDDIAEVRRLVITPTK 424

Query: 422  AYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSFP 481
            AYC PPEVELSNRVLR+YK+VADRFLRVTFMDEGM+KINS+V  YYVAPIVKEITS+SF 
Sbjct: 425  AYCLPPEVELSNRVLRKYKEVADRFLRVTFMDEGMQKINSNVLNYYVAPIVKEITSNSFL 484

Query: 482  QKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGKF 541
            QKT +F R + IL  GF+LCGRKY+FLA+SSNQLRD+SAWFFAEC +ISV  I  WMGKF
Sbjct: 485  QKTNVFKRFRTILNDGFYLCGRKYTFLAFSSNQLRDRSAWFFAECVNISVGKITSWMGKF 544

Query: 542  TNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEVA 601
             NKNVAKCAAR+GQCFSSTYAT+EV  + VN D+ D++RNGYVFSDGIG ITPDLA EVA
Sbjct: 545  NNKNVAKCAARMGQCFSSTYATVEVTSSEVN-DIPDIKRNGYVFSDGIGMITPDLALEVA 604

Query: 602  DKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTRF 661
            +KLK+D +PPCAYQIR+AG KGVVA WPSK DG RL+LR SMNKFES H  LEICSWTR+
Sbjct: 605  EKLKLDRNPPCAYQIRFAGCKGVVACWPSKGDGFRLSLRTSMNKFESKHTTLEICSWTRY 664

Query: 662  QPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAAA 721
            QPGFLNRQIITLLSTL+V DEIFW MQE M+ KL++M+ DTDVAF+VLTASCAEQGNAAA
Sbjct: 665  QPGFLNRQIITLLSTLNVEDEIFWRMQEKMVLKLNQMLVDTDVAFDVLTASCAEQGNAAA 724

Query: 722  IMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQCF 781
            IMLSAGF+P+TEPHLRGML CI+AAQLWGLREKARIFV  GRW MG  DE GVL++GQCF
Sbjct: 725  IMLSAGFKPQTEPHLRGMLTCIQAAQLWGLREKARIFVHSGRWLMGVLDELGVLEQGQCF 784

Query: 782  IQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHHL 841
            +QVSTPLLE CF+KHGS FA+ + NL V++G VVIAKNPCLHPGD+RILEAVDAP LHHL
Sbjct: 785  VQVSTPLLESCFAKHGSSFAQIERNLQVIKGHVVIAKNPCLHPGDIRILEAVDAPGLHHL 844

Query: 842  YDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQRK 901
            YDCLVFP+ G+RPHT+EASGSDLDGDLYF TWD NLIPPSKKSW PM+Y PAE K   R 
Sbjct: 845  YDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDENLIPPSKKSWMPMQYDPAEAKLQGRP 904

Query: 902  ITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTGK 961
            +T+ DI++FF KNM NE+LG ICNAHVVHADRS +GALD NC++L+ELAA AVDFPKTGK
Sbjct: 905  VTQQDIIDFFVKNMTNENLGPICNAHVVHADRSDYGALDVNCLKLAELAALAVDFPKTGK 964

Query: 962  LVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGDV 1021
            +V++P HLKP+LYPDF+GKE  QSYKSTKILG++YR++RDAY D+D  TS EL++ P D+
Sbjct: 965  IVSLPQHLKPRLYPDFLGKEDNQSYKSTKILGRLYRKVRDAY-DEDAATSSELHYFPSDI 1024

Query: 1022 HYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRKQ 1081
             YD+DLEV GA DF+ +AW++KCSYDGQL GL+GQYKV REEEIVTGH+WS+PK  S+KQ
Sbjct: 1025 PYDMDLEVPGAADFVFDAWEKKCSYDGQLKGLMGQYKVKREEEIVTGHVWSIPKSNSKKQ 1084

Query: 1082 GELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLKK 1141
            GELKE+L HSY+ LKK+FRQ+FENL    E LT DE+N L EKKASAWYQV YHP W+K+
Sbjct: 1085 GELKERLSHSYNALKKEFRQMFENLDSNLEALTDDEKNLLCEKKASAWYQVTYHPKWVKQ 1144

Query: 1142 SLELREPDAP-EAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1198
            S  L+EPD P + V MLSF WIAADYLARIKIKC   +  D TKPINSL  YL+DR+
Sbjct: 1145 SPPLQEPDGPGDVVVMLSFAWIAADYLARIKIKCHGVEHIDSTKPINSLKRYLADRI 1196

[Close]
BLAST of Csa2G381730 vs. TAIR10
Match: AT3G49500.1 (AT3G49500.1 RNA-dependent RNA polymerase 6)

HSP 1 Score: 1642.9 bits (4253), Expect = 0.0e+00
Identity = 791/1199 (65.97%), Postives = 954/1199 (79.57%), Query Frame = 1 

Query: 1    MGSEEG-EKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEV 60
            MGSE   +K VVTQVS GGF     A+ L  YLE E+G+V RCRLKTSWTPP SYP+FE+
Sbjct: 1    MGSEGNMKKSVVTQVSIGGFGESTTAKQLTDYLEDEVGIVWRCRLKTSWTPPGSYPNFEI 60

Query: 61   SNVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHI 120
            ++ +N+   D+YKKV PHAFVHF   +SA  A+ AAG+  LI + + LK SLGP++P+ +
Sbjct: 61   ADTSNIPSIDEYKKVEPHAFVHFAVFESAGRAMDAAGQCNLILDGQPLKVSLGPKNPYSL 120

Query: 121  NQRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAF 180
            NQRRRT VP+KL+ + ++IG L   D F V+WR  + G+DFLVDPFD TCKFCF K TAF
Sbjct: 121  NQRRRTTVPYKLAGITLEIGTLVSRDDFFVSWR--AEGVDFLVDPFDNTCKFCFRKSTAF 180

Query: 181  SFKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKL 240
            SFKD   H  + CDYK+E +VRDI  + +Y     +V++LQL +SP +WYRTADDDI   
Sbjct: 181  SFKDAVMHAVINCDYKLELLVRDIQTVRQYKTLHGFVLILQLASSPRVWYRTADDDIYDT 240

Query: 241  VPYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLN 300
            VP DLLDDDDPWIRTTDFT  GAIGRC+++RV + PRY  KL  A++Y + +RV +  + 
Sbjct: 241  VPGDLLDDDDPWIRTTDFTQVGAIGRCHSYRVLISPRYENKLRTALDYFRMRRVQEERVR 300

Query: 301  RPPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRN 360
             PP+I NEP +G  ++DHFFCI +K+ ISFEI+FLVN+V+H+G+ NQ Q+++RFFDLLRN
Sbjct: 301  WPPRIRNEPCFGEPVSDHFFCIHHKEGISFEIMFLVNSVLHRGVFNQFQLTERFFDLLRN 360

Query: 361  QPNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITP 420
            QP +VN+A+L H+  ++RPV DA K+LKLVQEW+ KNP LL   ++  DI EIRRLVITP
Sbjct: 361  QPKDVNIASLKHLCTYKRPVFDAYKRLKLVQEWIQKNPKLLGSHEQSEDISEIRRLVITP 420

Query: 421  SKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSS 480
            ++AYC PPEVELSNRVLRRYK VA+RFLRVTFMDE M+ INS+V +Y+VAPIVK++TSSS
Sbjct: 421  TRAYCLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVAPIVKDLTSSS 480

Query: 481  FPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMG 540
            F QKT +F R+K IL  GF LCGRKYSFLA+S+NQLRD+SAWFFAE     V  I  WMG
Sbjct: 481  FSQKTYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKTRVSDIKTWMG 540

Query: 541  KFTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQE 600
            KF +KNVAKCAAR+G CFSSTYAT++V  + V+ ++ D+ERNGYVFSDGIGTITPDLA E
Sbjct: 541  KFKDKNVAKCAARMGLCFSSTYATVDVMPHEVDTEVPDIERNGYVFSDGIGTITPDLADE 600

Query: 601  VADKLKMDGS-PPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSW 660
            V +KLK+D    PCAYQIRYAG+KGVVA WPSK DGIRLALR SM KF S H ILEICSW
Sbjct: 601  VMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSMKKFFSKHTILEICSW 660

Query: 661  TRFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGN 720
            TRFQPGFLNRQIITLLS L VPDEIFW MQE+M+ KL+R++ DTDVAFEVLTASCAEQGN
Sbjct: 661  TRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAFEVLTASCAEQGN 720

Query: 721  AAAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEG 780
             AAIMLSAGF+P+TEPHLRGML  +R AQLWGLREK+RIFVT GRW MGC DE+G+L+ G
Sbjct: 721  TAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWLMGCLDEAGILEHG 780

Query: 781  QCFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPEL 840
            QCFIQVS P +E CFSKHGS F ETK +L VV+G V IAKNPCLHPGDVRILEAVD P+L
Sbjct: 781  QCFIQVSKPSIENCFSKHGSRFKETKTDLEVVKGYVAIAKNPCLHPGDVRILEAVDVPQL 840

Query: 841  HHLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTL 900
            HH+YDCL+FP+ G+RPHTNEASGSDLDGDLYF  WD  LIPP++KS+P M Y  AE K+L
Sbjct: 841  HHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPNRKSYPAMHYDAAEEKSL 900

Query: 901  QRKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPK 960
             R +   DI++FFA+N+ NE LGTICNAHVVHADRS++GA+DE C+ L+ELAATAVDFPK
Sbjct: 901  GRAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECLLLAELAATAVDFPK 960

Query: 961  TGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTP 1020
            TGK+V+MP HLKPKLYPDFMGKE  Q+YKS KILG++YRR+++ YD+D   +S E +  P
Sbjct: 961  TGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRRVKEVYDEDAEASSEE-STDP 1020

Query: 1021 GDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVS 1080
              + YD  LE+ G ED I EAW  KC YDGQL GLLGQYKV +EEEIVTGHIWSMPKY S
Sbjct: 1021 SAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYTS 1080

Query: 1081 RKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTW 1140
            +KQGELKE+LKHSY++LKK+FR+VFE   P+ E L+ +E+N LYEKKASAWY V YHP W
Sbjct: 1081 KKQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKASAWYHVTYHPEW 1140

Query: 1141 LKKSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1198
            +KKSLEL++PD      MLSF WIAADYLARIKI+ R   S D  KP++SLA +L+ R+
Sbjct: 1141 VKKSLELQDPDESSHAAMLSFAWIAADYLARIKIRSREMGSIDSAKPVDSLAKFLAQRL 1196

[Close]
BLAST of Csa2G381730 vs. TAIR10
Match: AT1G14790.1 (AT1G14790.1 RNA-dependent RNA polymerase 1)

HSP 1 Score: 559.7 bits (1441), Expect = 4.4e-159
Identity = 355/1000 (35.50%), Postives = 537/1000 (53.70%), Query Frame = 1 

Query: 193  DYKMEFIVRDINQITRYTDT--SCYVILLQLTASPCIWYRTADDDIAKLVPYDLLD---- 252
            DY++E    +I QI  ++    S   +++Q+  +P I+ +  +D    L+ + ++D    
Sbjct: 143  DYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAPKIFEK--EDQPINLL-FGIMDFYSD 202

Query: 253  -DDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIK--LNNAMNYLKEQRVHQVSLNRPPK 312
              D+ WIRTTDFT S  IG+   F + +P    +     N  NY  E R     +     
Sbjct: 203  GSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNVPDFRENFANYA-EHRASSFLIESGSS 262

Query: 313  ILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQPNE 372
              +  +  V + D          + FEILF +N ++    ++   +   F+ LL  +  +
Sbjct: 263  YSSNANTLVPVVDPPPGF----SLPFEILFKLNTLVQNACLSGPALDLDFYRLLNQK--K 322

Query: 373  VNLAALSHIHAFRRPVLDACKK-----LKLVQEWLLKNPTLLKRSKELVD-IVEIRRLVI 432
             + A + H       + + C +         ++W+ K    L  +  L D +V + R+ +
Sbjct: 323  YDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGKLPLSPTISLDDGLVYMYRVQV 382

Query: 433  TPSKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITS 492
            TP++ Y   PEV +SNRVLR Y    + FLRV+F+DE ++K+ S   +            
Sbjct: 383  TPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVRSMDLS----------PR 442

Query: 493  SSFPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGW 552
            SS  ++TK++ R+  +L+ G  +  +K+ FLA+SS+QLR+ SAW FA    I+   I  W
Sbjct: 443  SSTQRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDRITAAHIRAW 502

Query: 553  MGKFTN-KNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVE----RNGYVFSDGIGTI 612
            MG F + +NVAK AAR+GQ FSS+  T+ V  + +   + DVE       YVFSDGIG I
Sbjct: 503  MGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEV-IPDVEIISLGTRYVFSDGIGKI 562

Query: 613  TPDLAQEVADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRI 672
            + + A++VA K  +    P A+QIRY GYKGVVA  P+     +L+LR SM+KFES +  
Sbjct: 563  SAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSK--KLSLRKSMSKFESENTK 622

Query: 673  LEICSWTRFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTAS 732
            L++ +W+++QP ++NRQ+ITLLSTL V D +F   Q  ++ +LD ++T    A E L   
Sbjct: 623  LDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPLEAHEALGLM 682

Query: 733  C-AEQGNAAAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDE 792
               E  N    ++  G++P  EP L  ML   RA++L  LR K RIF++ GR  MGC DE
Sbjct: 683  APGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGGRSMMGCLDE 742

Query: 793  SGVLQEGQCFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILE 852
            +  L+ GQ  +Q S P+      + G  F        ++ G VV+AKNPCLHPGDVR+L+
Sbjct: 743  TRTLEYGQVVVQYSDPM------RPGRRF--------IITGPVVVAKNPCLHPGDVRVLQ 802

Query: 853  AVDAPELHHLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYA 912
            AV+ P L+H+ DC+VFP+ G RPH NE SGSDLDGD+YF  WD  L+PP  ++  PM+Y 
Sbjct: 803  AVNVPALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPP--RTSEPMDYT 862

Query: 913  PAEVKTLQRKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAA 972
            P   + L   +T  ++ E+FA  ++N+SLG I NAH   AD+    A  + CI+L++  +
Sbjct: 863  PEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELAKKFS 922

Query: 973  TAVDFPKTGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITS 1032
            TAVDFPKTG    +P HL  K YPDFM K    +Y+S  ++GK++R +++      +I+ 
Sbjct: 923  TAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKER--APPLISI 982

Query: 1033 RELNFTPGDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIW 1092
            +          YD D+EV G E+++ EA+ QK +YD +L  L+  Y +  E EI++G I 
Sbjct: 983  KSFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGGIM 1042

Query: 1093 SMPKYVSRKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQ 1152
             M K  ++++    E +  +   L+K+   +F             E       KASAWY 
Sbjct: 1043 RMSKSFTKRRD--AESIGRAVRALRKETLSLF----------NASEEEENESAKASAWYH 1084

Query: 1153 VAYHPTWLKKSLELREPDAPEAVPMLSFPWIAADYLARIK 1172
            V YH ++     E    D       LSF W   D L RIK
Sbjct: 1103 VTYHSSYWGLYNEGLNRD-----HFLSFAWCVYDKLVRIK 1084

[Close]
BLAST of Csa2G381730 vs. TAIR10
Match: AT4G11130.1 (AT4G11130.1 RNA-dependent RNA polymerase 2)

HSP 1 Score: 505.8 bits (1301), Expect = 7.5e-143
Identity = 347/1051 (33.02%), Postives = 531/1051 (50.52%), Query Frame = 1 

Query: 162  VDPFDGTCKFCFTKDTAFSFKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQL 221
            ++ +DG   +  T+     F         K + + E I+  ++       +     LL+L
Sbjct: 126  LEKWDGVRCWILTEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGDASEIDAFLLKL 185

Query: 222  TASPCIWYRTADDDIAKLVP----YDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRY 281
               P ++ R       K       +   D D  WIRTTDF+ S +IG    F + V    
Sbjct: 186  KYGPKVFKRVTVHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTSTCFCLEV--HN 245

Query: 282  GIKLNNAMNYLKEQRVHQVSLNRPPKILNEPDYG--VQMTDHFFCILYKKDISFEILFLV 341
            G  + +  + L   R   +SL      ++   +    Q+       +   +  +EILF +
Sbjct: 246  GSTMLDIFSGLPYYREDTLSLT----YVDGKTFASAAQIVPLLNAAILGLEFPYEILFQL 305

Query: 342  NAVMHKGIINQHQMSD-RFFDLLRNQPNEVNLAALSHIHAFRR----PVLDACKKLKLVQ 401
            NA++H   I+    SD     +LR    E  L  L  +H        PV     +++ V 
Sbjct: 306  NALVHAQKISLFAASDMELIKILRGMSLETALVILKKLHQQSSICYDPVFFVKTQMQSVV 365

Query: 402  EWLLKNPTLLKRSKELVDIVEIRRLVITPSKAYCFPPEVELSNRVLRRYKDVADRFLRVT 461
            + +  +P    +     +I+  +R  +TPSK Y   PE+E +N V++ + +    F+RVT
Sbjct: 366  KKMKHSPASAYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDFMRVT 425

Query: 462  FMDEGMKKINSHVYT------YYVAPIVKEITSSSFPQKTKIFARMKHILKHGFHLCGRK 521
            F++E   K+ ++  +      Y+V P            +T I+ R+  IL  G  +  ++
Sbjct: 426  FVEEDWSKLPANALSVNSKEGYFVKP-----------SRTNIYNRVLSILGEGITVGPKR 485

Query: 522  YSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGKFTN-KNVAKCAARIGQCFSSTYAT 581
            + FLA+S++QLR  S W FA  + +  + I  WMG F   ++++KCAAR+GQ FS++  T
Sbjct: 486  FEFLAFSASQLRGNSVWMFASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQT 545

Query: 582  IEVPRNMVNHDLSDVERN----GYVFSDGIGTITPDLAQEVADKLKMDGSPPCAYQIRYA 641
            + V    V   + D+E       Y FSDGIG I+   A++VA K  +    P A+QIRY 
Sbjct: 546  LIVRAQDVEQ-IPDIEVTTDGADYCFSDGIGKISLAFAKQVAQKCGLS-HVPSAFQIRYG 605

Query: 642  GYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTRFQPGFLNRQIITLLSTLSV 701
            GYKGV+A    +    +L+LR SM KF+SN+R+L +  WT   P FLNR+II LLSTL +
Sbjct: 606  GYKGVIAV--DRSSFRKLSLRDSMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGI 665

Query: 702  PDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQG-NAAAIMLSAGFEPRTEPHLRG 761
             D +F +MQ   +S L  M+ D D A  VL     E   N    ML  G+ P +EP+L  
Sbjct: 666  EDAMFEAMQAVHLSMLGNMLEDRDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSM 725

Query: 762  MLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQCFIQVSTPLLEKCFSKHGS 821
            ML     +QL  L+ + RI V +GR  +GC DE G+L+ GQ +++V+    E   S+  S
Sbjct: 726  MLRVHHESQLSELKSRCRILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAE-LKSRDQS 785

Query: 822  LFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH----LYDCLVFPRNGERP 881
             F +     +VV G VV+ KNPCLHPGD+R+L+A+   E+H       DC++FP+ GERP
Sbjct: 786  YFRKIDEETSVVIGKVVVTKNPCLHPGDIRVLDAIY--EVHFEEKGYLDCIIFPQKGERP 845

Query: 882  HTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQRKITRWDIMEFFAKN 941
            H NE SG DLDGD +F +WD  +IP      PPM+YA +  + +   +T  +I +FF   
Sbjct: 846  HPNECSGGDLDGDQFFVSWDEKIIPSEMD--PPMDYAGSRPRLMDHDVTLEEIHKFFVDY 905

Query: 942  MINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTGKLVTMPPHLKPKLY 1001
            MI+++LG I  AH+VHADR    A  + C++L+ L + AVDF KTG    MP  LKP+ +
Sbjct: 906  MISDTLGVISTAHLVHADRDPEKARSQKCLELANLHSRAVDFAKTGAPAEMPYALKPREF 965

Query: 1002 PDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD-VHYDVDLEVAGAE 1061
            PDF+ +    +Y S  + GK+YR ++ +      +  R+      D V YDV LE AG E
Sbjct: 966  PDFLERFEKPTYISESVFGKLYRAVKSS------LAQRKPEAESEDTVAYDVTLEEAGFE 1025

Query: 1062 DFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYV---SRKQGELKEKLKH 1121
             FI  A   +  Y  +L+ L+  Y    EEEI+TG + +   Y+   +R+ G++K+++  
Sbjct: 1026 SFIETAKAHRDMYGEKLTSLMIYYGAANEEEILTGILKTKEMYLARDNRRYGDMKDRITL 1085

Query: 1122 SYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLKKSLELREPDA 1181
            S   L K+    FE         +C++     +K ASAWY V Y+P              
Sbjct: 1086 SVKDLHKEAMGWFEK--------SCEDEQQ-KKKLASAWYYVTYNPN-----------HR 1124

[Close]
BLAST of Csa2G381730 vs. TAIR10
Match: AT2G05370.1 (AT2G05370.1 BEST Arabidopsis thaliana protein match is: RNA-dependent RNA polymerase 6 (TAIR:AT3G49500.1))

HSP 1 Score: 112.1 bits (279), Expect = 2.4e-24
Identity = 60/136 (44.12%), Postives = 86/136 (63.24%), Query Frame = 1 

Query: 7   EKIVVTQVSFGGFDSDVKARDLMSYLESEIGL-VDRCRLKTSWTPPESYPDFEVSNVANV 66
           + +VV+QV+  GF    K ++L  YLE+++GL V RCRLKTSWTP  SYP+FE+ + +N+
Sbjct: 2   KNLVVSQVTISGFGESTKTKELTDYLENKVGLLVWRCRLKTSWTPHGSYPNFEIIDTSNI 61

Query: 67  IKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHINQRRRT 126
            K D Y++VVPHAFVH    D+    + AA + +LI   + LK SL  E+P+ +N     
Sbjct: 62  PKFDCYERVVPHAFVHC---DAHKSLMDAAEQSKLILGGQPLKFSLSSENPYTLN----- 121

Query: 127 KVPFKLSDVQVDIGNL 142
             P+KL+ V ++IG L
Sbjct: 122 --PYKLTGVSLEIGTL 127


HSP 2 Score: 91.3 bits (225), Expect = 4.4e-18
Identity = 44/74 (59.46%), Postives = 51/74 (68.92%), Query Frame = 1 

Query: 221 LTASPCIWYRTADDDIAKLVPYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIK 280
           L +SP +WYRTADDDI +    DLLDD+DPWIRTTDFT SGAI RC  +RV + PR   K
Sbjct: 127 LASSPRVWYRTADDDIYETSAVDLLDDNDPWIRTTDFTQSGAIRRCLGYRVFISPRDHNK 186

Query: 281 LNNAMNYLKEQRVH 295
               ++YLK QRV+
Sbjct: 187 WTKVLDYLKTQRVN 200

[Close]
BLAST of Csa2G381730 vs. TAIR10
Match: AT2G19930.1 (AT2G19930.1 RNA-dependent RNA polymerase family protein)

HSP 1 Score: 105.9 bits (263), Expect = 1.7e-22
Identity = 125/543 (23.02%), Postives = 225/543 (41.44%), Query Frame = 1 

Query: 574  DLSDVERNGYVFSDGIGTITPDLA---------------QEVADKLKMDGSPPCAYQIR- 633
            D+ D  +   + SDG G I+ DLA               + + +    D  PP   Q R 
Sbjct: 387  DVLDKNKKPCIHSDGTGYISEDLARMCPLNIFKGKCLRSESIQEACYQD--PPLLIQFRM 446

Query: 634  -YAGY--KGVVA--------TWPSKKDGIRLALRPSMNKFESNHRILEICSWTRFQPGFL 693
             Y GY  KG           T   +   I+++  PS++ F + + +  + +    +   L
Sbjct: 447  FYDGYAVKGTFLLNKKLCPRTVQVRPSMIKVSKDPSLSNFSTFNALEVVTTSNPPKRTKL 506

Query: 694  NRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAAAIMLSA 753
            ++ ++ LLS   +P+E F  +    + +   +  +   A              AA M+  
Sbjct: 507  SKNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKRAALNAALNYGEMDDQNAAQMILV 566

Query: 754  GFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQCFIQVST 813
            G  P  EPHL+  L  +   +   L+   ++ VTE  + MG  D +G L+E +  +    
Sbjct: 567  GI-PLDEPHLKNYLSILLKTEKNDLKA-GKLPVTESYYLMGTVDPTGALKEDEVCV---- 626

Query: 814  PLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHHLYD--- 873
             +LE                   + G V++ +NP LH GD+ IL+A     L        
Sbjct: 627  -ILES----------------GQISGEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSK 686

Query: 874  -CLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLI-------------PPSKKS--WPP 933
              + FP+ G R   +E +G D DGD+YF + +  L+             PPSK +    P
Sbjct: 687  FAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPELLENFKPSEPWVSLTPPSKSNSGRAP 746

Query: 934  MEYAPAEVKTLQRKITRWDIMEFFAKNMIN---ESLGTICNAHVVHAD--RSKHGALDEN 993
             + +P E++  +     +    F A N+I    +S  TI +  ++  D    +   + + 
Sbjct: 747  SQLSPEELE--EELFEMFLTAGFHASNVIGIAADSWLTIMDRFLILGDDRAEEKAEMKKK 806

Query: 994  CIQLSELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDA 1053
             ++L ++   A+D PK G  V +P  LKP ++P +M  E  + ++ST ILG ++  ++ +
Sbjct: 807  MLELIDIYYDALDAPKKGDKVYLPNKLKPDIFPHYM--ERDKKFQSTSILGLIFDFVK-S 866

Query: 1054 YDDDDMITSRELNFTPGDVHYDVDLEVAGAEDFIAEAWDQKCS--YDGQLSGLLGQYKVN 1064
               ++   S E++  P              ++ ++E   QKC   YD   + +    K +
Sbjct: 867  QTTEEPSPSSEISKLP-----------CFEDEPVSEFHMQKCRLWYDNYRTEMTQAMKTD 888

[Close]
BLAST of Csa2G381730 vs. NCBI nr
Match: gi|525507190|ref|NP_001267634.1| (RNA-dependent RNA polymerase 6-like [Cucumis sativus])

HSP 1 Score: 2458.3 bits (6370), Expect = 0.0e+00
Identity = 1197/1197 (100.00%), Postives = 1197/1197 (100.00%), Query Frame = 1 

Query: 1    MGSEEGEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS 60
            MGSEEGEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS
Sbjct: 1    MGSEEGEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS 60

Query: 61   NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHIN 120
            NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHIN
Sbjct: 61   NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHIN 120

Query: 121  QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS 180
            QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS
Sbjct: 121  QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS 180

Query: 181  FKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKLV 240
            FKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKLV
Sbjct: 181  FKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKLV 240

Query: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR 300
            PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR
Sbjct: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR 300

Query: 301  PPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ 360
            PPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ
Sbjct: 301  PPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ 360

Query: 361  PNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPS 420
            PNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPS
Sbjct: 361  PNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPS 420

Query: 421  KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480
            KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF
Sbjct: 421  KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480

Query: 481  PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGK 540
            PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGK
Sbjct: 481  PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGK 540

Query: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEV 600
            FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEV
Sbjct: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEV 600

Query: 601  ADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTR 660
            ADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTR
Sbjct: 601  ADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTR 660

Query: 661  FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA 720
            FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA
Sbjct: 661  FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA 720

Query: 721  AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC 780
            AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC
Sbjct: 721  AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC 780

Query: 781  FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840
            FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH
Sbjct: 781  FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840

Query: 841  LYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQR 900
            LYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQR
Sbjct: 841  LYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQR 900

Query: 901  KITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTG 960
            KITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTG
Sbjct: 901  KITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTG 960

Query: 961  KLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD 1020
            KLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD
Sbjct: 961  KLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD 1020

Query: 1021 VHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK 1080
            VHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK
Sbjct: 1021 VHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK 1080

Query: 1081 QGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLK 1140
            QGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLK
Sbjct: 1081 QGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLK 1140

Query: 1141 KSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1198
            KSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM
Sbjct: 1141 KSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1197

[Close]
BLAST of Csa2G381730 vs. NCBI nr
Match: gi|659088868|ref|XP_008445204.1| (PREDICTED: RNA-dependent RNA polymerase 6 [Cucumis melo])

HSP 1 Score: 2394.0 bits (6203), Expect = 0.0e+00
Identity = 1162/1197 (97.08%), Postives = 1182/1197 (98.75%), Query Frame = 1 

Query: 1    MGSEEGEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS 60
            MGSEE EKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS
Sbjct: 1    MGSEESEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS 60

Query: 61   NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHIN 120
            NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGEL+FN KLLKASLGPESPFHIN
Sbjct: 61   NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELLFNGKLLKASLGPESPFHIN 120

Query: 121  QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS 180
            QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS
Sbjct: 121  QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS 180

Query: 181  FKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKLV 240
            FKDNNK+T LKCDYK+EFIVRDINQI RYTDTSCYVILLQLT+SPCIWYRTADDDIAK V
Sbjct: 181  FKDNNKYTVLKCDYKLEFIVRDINQIKRYTDTSCYVILLQLTSSPCIWYRTADDDIAKSV 240

Query: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR 300
            PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR
Sbjct: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR 300

Query: 301  PPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ 360
            PPKILNEPDYGVQMTDHFFCI YK+DISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ
Sbjct: 301  PPKILNEPDYGVQMTDHFFCIFYKEDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ 360

Query: 361  PNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPS 420
            PNEVNLAALSHIH++RRPVLDACKKLKLVQEWLLKNPTL KRSKELVDIVEIRRLVITPS
Sbjct: 361  PNEVNLAALSHIHSYRRPVLDACKKLKLVQEWLLKNPTLWKRSKELVDIVEIRRLVITPS 420

Query: 421  KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480
            KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF
Sbjct: 421  KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480

Query: 481  PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGK 540
            PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECK+ISVD ILGWMGK
Sbjct: 481  PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKNISVDGILGWMGK 540

Query: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEV 600
            FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNH+L DVERNGYVFSDGIGTITPDLAQEV
Sbjct: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHNLQDVERNGYVFSDGIGTITPDLAQEV 600

Query: 601  ADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTR 660
            ADKLKMDGS PCAYQIRYAGYKGVVATWPSK+DGIRLALRPSMNKFES+HRILEICSWTR
Sbjct: 601  ADKLKMDGSLPCAYQIRYAGYKGVVATWPSKEDGIRLALRPSMNKFESDHRILEICSWTR 660

Query: 661  FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA 720
            FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA
Sbjct: 661  FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA 720

Query: 721  AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC 780
            AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC
Sbjct: 721  AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC 780

Query: 781  FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840
            FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH
Sbjct: 781  FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840

Query: 841  LYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQR 900
            LYDCLVFP+NGERPHTNEASGSDLDGDLYFTTWD NLIPPSKKSWPPMEYAPA+VKTLQR
Sbjct: 841  LYDCLVFPQNGERPHTNEASGSDLDGDLYFTTWDENLIPPSKKSWPPMEYAPADVKTLQR 900

Query: 901  KITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTG 960
            KITR DIMEFFAKNMINESLGTICNAHVVHADRSK+GALDENCIQLSELAATAVDFPKTG
Sbjct: 901  KITRLDIMEFFAKNMINESLGTICNAHVVHADRSKYGALDENCIQLSELAATAVDFPKTG 960

Query: 961  KLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD 1020
            K+VTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD
Sbjct: 961  KIVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD 1020

Query: 1021 VHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK 1080
            VHYDVDLEVAGAEDFIAEAW+QKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK
Sbjct: 1021 VHYDVDLEVAGAEDFIAEAWNQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK 1080

Query: 1081 QGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLK 1140
            QGELKEKLKHSYSTLKKDFRQVFEN+GPEFEQLTCDERNA YEKKASAWYQVAYHPTWLK
Sbjct: 1081 QGELKEKLKHSYSTLKKDFRQVFENIGPEFEQLTCDERNAFYEKKASAWYQVAYHPTWLK 1140

Query: 1141 KSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1198
            KSLELREPDAPEA+PMLSFPWIAADYLARIKIKCRR KSFDPTKPINSL SYLS+R+
Sbjct: 1141 KSLELREPDAPEAIPMLSFPWIAADYLARIKIKCRRMKSFDPTKPINSLVSYLSERI 1197

[Close]
BLAST of Csa2G381730 vs. NCBI nr
Match: gi|802627169|ref|XP_012076580.1| (PREDICTED: RNA-dependent RNA polymerase 6-like [Jatropha curcas])

HSP 1 Score: 1830.8 bits (4741), Expect = 0.0e+00
Identity = 872/1198 (72.79%), Postives = 1016/1198 (84.81%), Query Frame = 1 

Query: 1    MGSEEGEK-IVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEV 60
            M +++ EK  VVTQVSFGGFD+ VKA+DL++YLE EIG V RCRLKTSWTPPESYP+FE+
Sbjct: 1    METQKSEKDTVVTQVSFGGFDNHVKAKDLVAYLEEEIGQVWRCRLKTSWTPPESYPNFEI 60

Query: 61   SNVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHI 120
            ++ A + ++ +YK+V PHAFVHF S +SA  A +AAG  EL  ND+ LK SLGPE+PFH+
Sbjct: 61   TDAAAIHRTHEYKRVEPHAFVHFASAESATWAKNAAGHCELFLNDRPLKVSLGPENPFHL 120

Query: 121  NQRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAF 180
            NQRRR  +PFKLSDV ++IG L   D F V WRGPSSG+DFLVDPFDGTCKFCFT DTAF
Sbjct: 121  NQRRRKNIPFKLSDVCIEIGTLVSRDEFLVGWRGPSSGVDFLVDPFDGTCKFCFTMDTAF 180

Query: 181  SFKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKL 240
            S KD  KH  ++CD+K+EF+VRDIN++ +YTDTSC VILLQL ++P +WYRTADDDI   
Sbjct: 181  SIKDTTKHAIIRCDFKLEFLVRDINEVKQYTDTSCIVILLQLASAPLVWYRTADDDIEVS 240

Query: 241  VPYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLN 300
            VP+DLLDDDDPWIRTTDFT SGAIGRCN +RVS+PPR+G KL  A N+LKE+RV + SL 
Sbjct: 241  VPFDLLDDDDPWIRTTDFTPSGAIGRCNFYRVSIPPRHGAKLKRARNFLKERRVQEDSLR 300

Query: 301  RPPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRN 360
            RP KI+NEPDYG+ M+D FFCI +K+ I+FEI+FLVNAVMHKGI NQHQ+SD FFDLLRN
Sbjct: 301  RPLKIVNEPDYGMPMSDPFFCIHHKEGIAFEIMFLVNAVMHKGIFNQHQLSDNFFDLLRN 360

Query: 361  QPNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITP 420
            Q  ++N+AAL HI ++++PV DA K LK VQEWLLKNP L KRSK+L DIVEIRRL +TP
Sbjct: 361  QSLDINVAALKHICSYKQPVFDAHKGLKAVQEWLLKNPKLFKRSKQLDDIVEIRRLALTP 420

Query: 421  SKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSS 480
            ++AYC PPEVELSNRVLR+YK++ADRFLRVTFMDEG++ IN++  TYYVAPIV++ITS+S
Sbjct: 421  TRAYCLPPEVELSNRVLRKYKNIADRFLRVTFMDEGLQTINANTLTYYVAPIVRDITSTS 480

Query: 481  FPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMG 540
            F QKT+IF R+K IL  GF+LCGR+YSFLA+SSNQLRD+SAWFFAE   ISV  I  WMG
Sbjct: 481  FSQKTRIFRRVKSILTDGFNLCGRRYSFLAFSSNQLRDRSAWFFAEDGKISVGQIRKWMG 540

Query: 541  KFTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQE 600
            +FTN+N+AKCAAR+GQCFSSTYAT+EVP + VNH L D+ERNGY+FSDGIGTITPDLA+E
Sbjct: 541  RFTNRNIAKCAARMGQCFSSTYATVEVPSSEVNHALPDIERNGYIFSDGIGTITPDLAKE 600

Query: 601  VADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWT 660
            VA+KLK+D + PCAYQIRYAG KGVVA WP++ DGIRL+LRPSMNKF+SNH  LEICSWT
Sbjct: 601  VAEKLKLDINLPCAYQIRYAGCKGVVACWPAQGDGIRLSLRPSMNKFQSNHTTLEICSWT 660

Query: 661  RFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNA 720
            RFQPGFLNRQIITLLSTL+V DE+FW MQ  M+SKL++M+TD DVAF+V+T SCAEQGN 
Sbjct: 661  RFQPGFLNRQIITLLSTLNVSDEVFWEMQTAMVSKLNKMLTDADVAFDVITKSCAEQGNT 720

Query: 721  AAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQ 780
            AAIMLSAGF+P+ EPHLRGML CIRAAQ WGLREKARIFVT GRW MGC DE GVL++GQ
Sbjct: 721  AAIMLSAGFKPQNEPHLRGMLTCIRAAQFWGLREKARIFVTSGRWLMGCLDELGVLEQGQ 780

Query: 781  CFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELH 840
            CFIQVS P LE CFSKHGS F+ETK NL V++GTVVIAKNPCLHPGDVRILEAVDAP LH
Sbjct: 781  CFIQVSNPCLETCFSKHGSKFSETKKNLQVIKGTVVIAKNPCLHPGDVRILEAVDAPGLH 840

Query: 841  HLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQ 900
            HL+DCLVFP+ G+RPHTNEASGSDLDGDLYF TWD NLIPPSKKSW PM+Y  AE K L 
Sbjct: 841  HLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDDNLIPPSKKSWTPMQYDAAEAKLLN 900

Query: 901  RKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKT 960
            R ++  DI++FFAKNM+NE+LG ICNAHVVHAD S+HGALDENCI+L+ELAATAVDFPKT
Sbjct: 901  RPVSHQDIIDFFAKNMVNENLGAICNAHVVHADLSEHGALDENCIKLAELAATAVDFPKT 960

Query: 961  GKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPG 1020
            GKLVTMPP+LKPK+YPDFMGKE  QSYKSTKILG++YR+I DAY DDD     ELN   G
Sbjct: 961  GKLVTMPPYLKPKMYPDFMGKEEYQSYKSTKILGRLYRQIIDAYGDDDAAAFSELNCLSG 1020

Query: 1021 DVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSR 1080
            D+ YD DLEV G+ D+I EAWDQKCSYDGQL GLLGQYKV REEE+VTGHIWSMP   SR
Sbjct: 1021 DIPYDADLEVLGSADYILEAWDQKCSYDGQLKGLLGQYKVKREEELVTGHIWSMPMSNSR 1080

Query: 1081 KQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWL 1140
            KQG+LKE+LKHSYS LKK+FRQVFE +  + EQLT DE+N  YE+KASAWYQVAYHP W+
Sbjct: 1081 KQGDLKERLKHSYSALKKEFRQVFEGMNLDVEQLTDDEKNLQYERKASAWYQVAYHPKWI 1140

Query: 1141 KKSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1198
            KKSLEL+E DAP    MLSF WIAADYLARIKIK R T+  D  KP+NSL  YL+DR+
Sbjct: 1141 KKSLELQESDAPGNATMLSFSWIAADYLARIKIKRRGTEGIDTAKPVNSLVKYLTDRI 1198

[Close]
BLAST of Csa2G381730 vs. NCBI nr
Match: gi|1009137114|ref|XP_015885879.1| (PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba])

HSP 1 Score: 1792.3 bits (4641), Expect = 0.0e+00
Identity = 859/1199 (71.64%), Postives = 1006/1199 (83.90%), Query Frame = 1 

Query: 1    MGSEEGEK-IVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEV 60
            MGS+E EK +VVTQVS GGFD  V+A+DL  +LE EIGLV RCRLKTS TPPESYPD+ +
Sbjct: 1    MGSKENEKQMVVTQVSLGGFDRHVRAKDLSDFLEDEIGLVYRCRLKTSSTPPESYPDYTI 60

Query: 61   SNVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHI 120
               A + + DDYKKV PHAFVHF   +SA   L AAGR ELI ND+ LK SLGPE+P+ +
Sbjct: 61   DTAA-IERKDDYKKVEPHAFVHFALAESAKWILDAAGRCELILNDRPLKVSLGPENPYRL 120

Query: 121  NQRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAF 180
            NQRRRT  P KLSDV VDIG L   D F +AWRGP  G+DFLVDPFDGTCKFCFT+DTAF
Sbjct: 121  NQRRRTTTPIKLSDVVVDIGTLVTRDQFFIAWRGPPYGVDFLVDPFDGTCKFCFTRDTAF 180

Query: 181  SFKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKL 240
            SFK +  H  +KCD+KMEF+VRDIN+  +YTDTS  V+LLQL ++P IWYRTADDDI   
Sbjct: 181  SFKGSLNHAVIKCDFKMEFLVRDINEFKQYTDTSYLVLLLQLNSAPRIWYRTADDDIDDS 240

Query: 241  VPYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLN 300
            VPYD+LDDDDPWIRTTDFT SGAIGR N++R+SVPPR+G KL  A++YL+E+RVH  SL 
Sbjct: 241  VPYDMLDDDDPWIRTTDFTPSGAIGRSNSYRISVPPRHGAKLKKAISYLRERRVHHDSLR 300

Query: 301  RPPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRN 360
             P +I  EPD+ + M+D FFCI YK+DI FE +FLVNAV+HKGI NQHQ+SD FF+LLRN
Sbjct: 301  WPLRIQKEPDFDMPMSDPFFCIHYKEDIDFETMFLVNAVIHKGIFNQHQISDGFFNLLRN 360

Query: 361  QPNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITP 420
            Q  EVN+AAL HI +++RPV DAC++LK+VQEWLL++P L K+ K L DI E+RRLVITP
Sbjct: 361  QMKEVNVAALKHISSYKRPVFDACRRLKVVQEWLLRDPKLFKKPKRLDDIAEVRRLVITP 420

Query: 421  SKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSS 480
            ++AYC PPEVELSNRVLR YK+VADRFLRVTFMDEGM+ INS+V TY+VA IV+EITS+S
Sbjct: 421  TRAYCLPPEVELSNRVLRNYKEVADRFLRVTFMDEGMQTINSNVLTYHVASIVREITSNS 480

Query: 481  FPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMG 540
            FPQKTK+F R+K IL +GF+LCGRKYSFLA+SSNQLRD+SAWFFAE K+I+V  +  WMG
Sbjct: 481  FPQKTKVFQRIKSILTNGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKNINVFEVKSWMG 540

Query: 541  KFTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQE 600
            +FTN+NVAKCAAR+G CFSSTYA++EVP   VN    D++RNGY FSDGIG ITPDLA E
Sbjct: 541  RFTNRNVAKCAARMGLCFSSTYASVEVPSTQVNRGFPDIKRNGYTFSDGIGKITPDLALE 600

Query: 601  VADKLKMDGSPPCAYQIRYAGYKGVVATW-PSKKDGIRLALRPSMNKFESNHRILEICSW 660
            VA KLK++ +PPCAYQIRYAG+KGVVA W P+  DG RL+LRPSM+KF+SNH ILEICSW
Sbjct: 601  VAQKLKLERNPPCAYQIRYAGFKGVVACWKPTDDDGARLSLRPSMDKFQSNHTILEICSW 660

Query: 661  TRFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGN 720
            TRFQPGFLNRQI+TLLS L+V DEIFW+MQETMI KL++M+ DTD+AF+VLTASCAEQGN
Sbjct: 661  TRFQPGFLNRQIVTLLSALNVSDEIFWNMQETMIFKLNQMLIDTDIAFDVLTASCAEQGN 720

Query: 721  AAAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEG 780
             AAIMLSAGF P+ EPHLRGML CIRAAQLWGLREKARIFV  GRW MGC DE GVL++G
Sbjct: 721  VAAIMLSAGFSPQKEPHLRGMLTCIRAAQLWGLREKARIFVPSGRWLMGCLDELGVLEQG 780

Query: 781  QCFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPEL 840
            QCFIQVS P LE CFSKHGS F E  +NL V++G VVIAKNPCLHPGDVRILEAVD P+L
Sbjct: 781  QCFIQVSNPSLENCFSKHGSRFNERNDNLEVIKGFVVIAKNPCLHPGDVRILEAVDVPDL 840

Query: 841  HHLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTL 900
            HHLYDCLVFP+ GERPHTNEASGSDLDGDLYF TWD NLIPPSKKSW PM+Y  AE K L
Sbjct: 841  HHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMQYDAAETKQL 900

Query: 901  QRKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPK 960
             R +T+ DI+EFF+KNM+NE+LGTICNAHVVHAD S+HGALDE C++L++LAATAVDFPK
Sbjct: 901  TRPVTQEDIIEFFSKNMVNENLGTICNAHVVHADLSEHGALDEKCLKLADLAATAVDFPK 960

Query: 961  TGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTP 1020
            TGK+VTMP +LKPKLYPDFMGK+  QSYKS KILGK+YR+I+DAY D+D+  S E+NF P
Sbjct: 961  TGKIVTMPFNLKPKLYPDFMGKDEYQSYKSNKILGKLYRKIKDAY-DEDVTASSEINFLP 1020

Query: 1021 GDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVS 1080
             D+ YD+DLEV+GA DFI +AW+QKCSYDGQL+GLLGQYKVNREEE+VTGHIWSMPKY S
Sbjct: 1021 SDIPYDIDLEVSGASDFIVDAWEQKCSYDGQLNGLLGQYKVNREEEVVTGHIWSMPKYSS 1080

Query: 1081 RKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTW 1140
            RKQGELKE+LKHSYS LKK+FRQ+FE +  +FE+L+ DE+N +YE+KASAWYQV YHP W
Sbjct: 1081 RKQGELKERLKHSYSALKKEFRQIFEKMEEKFEELSDDEKNIIYEQKASAWYQVTYHPEW 1140

Query: 1141 LKKSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1198
            +KKSL+L+EPD      MLSF WIAADYL RIKI+CR   + D  KPIN+L  YLSDRM
Sbjct: 1141 VKKSLDLQEPDGSRYAVMLSFAWIAADYLTRIKIRCRGVGNVDCDKPINALGKYLSDRM 1197

[Close]
BLAST of Csa2G381730 vs. NCBI nr
Match: gi|255548928|ref|XP_002515520.1| (PREDICTED: RNA-dependent RNA polymerase 6 [Ricinus communis])

HSP 1 Score: 1786.5 bits (4626), Expect = 0.0e+00
Identity = 849/1196 (70.99%), Postives = 995/1196 (83.19%), Query Frame = 1 

Query: 7    EKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVSNVANVI 66
            ++ VVTQVSFGGFD DV ARDL++YL++EIG V RCRLKTSWTPPESYP+FE+++ A + 
Sbjct: 8    KETVVTQVSFGGFDKDVTARDLVAYLDNEIGQVWRCRLKTSWTPPESYPNFEITDTAVIQ 67

Query: 67   KSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHINQRRRTK 126
            + D Y++V PHAFVHF SPDSA  A +AAG  EL FN + +K SLGPE+PFH+NQRRRT 
Sbjct: 68   RVDAYRRVEPHAFVHFASPDSATWAKNAAGHCELFFNGRPVKVSLGPENPFHLNQRRRTT 127

Query: 127  VPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFSFKDNNK 186
            +PFKLSDV V+IG L   D F V WRGP SG+DFLVDPFDG CKFCFT+DTAFSFK   +
Sbjct: 128  IPFKLSDVHVEIGTLVSRDEFLVGWRGPPSGVDFLVDPFDGKCKFCFTRDTAFSFKGTTE 187

Query: 187  HTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKLVPYDLLD 246
            H  ++CD+K+EF+VRDIN+I +YTDTSC VILLQL ++P +WYRTADDDI  LVP+DLLD
Sbjct: 188  HAVIRCDFKLEFLVRDINEIKQYTDTSCLVILLQLASAPSVWYRTADDDIEVLVPFDLLD 247

Query: 247  DDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNRPPKILN 306
            DDDPWIRTTDFT SGAIGRCN++RVS+PPR+G KL  A+N+L+E+RV +  L RP  +  
Sbjct: 248  DDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGAKLKRALNFLRERRVQEDCLRRPLHVTA 307

Query: 307  EPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQPNEVNL 366
            EP+Y + M+D FFCI +++ + F ++FLVNAVMHKGI NQHQ+SD FFDLLRNQP +VN+
Sbjct: 308  EPEYEMPMSDPFFCIHHEEGVDFNLMFLVNAVMHKGIFNQHQLSDSFFDLLRNQPLDVNI 367

Query: 367  AALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPSKAYCFP 426
            AAL HI +++ PV DA K+LK VQ+WLLKNP L + SK+L DIVEIRRL ITP++AYC P
Sbjct: 368  AALRHICSYKHPVFDAHKRLKAVQQWLLKNPKLFRSSKQLDDIVEIRRLAITPTRAYCLP 427

Query: 427  PEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSFPQKTKI 486
            PEVELSNRVLRRYKD+AD+FLRVTFMDEG++ +N++  TYY APIV++ITS+SF QKT+I
Sbjct: 428  PEVELSNRVLRRYKDIADQFLRVTFMDEGLQTMNANTLTYYCAPIVRDITSNSFSQKTRI 487

Query: 487  FARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGKFTNKNV 546
            F R+K IL  GF+LCGRKYSFLA+SSNQLRD+SAWFFAE    SV  I  WMGKFTN+N+
Sbjct: 488  FKRVKSILTDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDGKTSVSKIRNWMGKFTNRNI 547

Query: 547  AKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEVADKLKM 606
            AKCAAR+GQCFSSTYAT+EVP      DL D+ERN Y+FSDGIG ITPDLA+EVA+KLK+
Sbjct: 548  AKCAARMGQCFSSTYATVEVPSAEAILDLPDIERNNYIFSDGIGMITPDLAKEVAEKLKL 607

Query: 607  DGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTRFQPGFL 666
            + +PPCAYQIRYAG KGVVA WP+  DGIRL+LR SMNKF SNH  LEICSWTRFQPGFL
Sbjct: 608  EVNPPCAYQIRYAGCKGVVACWPAHIDGIRLSLRVSMNKFHSNHTTLEICSWTRFQPGFL 667

Query: 667  NRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAAAIMLSA 726
            NRQIITLLSTL VPDEIFW MQ  M+SKL++M  D DVAF+V+TASCAEQGN AAIMLSA
Sbjct: 668  NRQIITLLSTLDVPDEIFWKMQIVMVSKLNQMFMDADVAFDVVTASCAEQGNTAAIMLSA 727

Query: 727  GFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQCFIQVST 786
            GF P+TEPHL GML CIRAAQLWGLREK RIFV  GRW MGC DE GVL+ GQCFIQVS 
Sbjct: 728  GFNPKTEPHLCGMLTCIRAAQLWGLREKTRIFVPSGRWLMGCLDELGVLEHGQCFIQVSN 787

Query: 787  PLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHHLYDCLV 846
            P LE CF KHGS F+E+K  L VV+GTVV+AKNPCLHPGD+RILEAVDAPELHHL+DCLV
Sbjct: 788  PSLESCFWKHGSRFSESKKKLQVVKGTVVVAKNPCLHPGDIRILEAVDAPELHHLHDCLV 847

Query: 847  FPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQRKITRWD 906
            FP+ G+RPHTNEASGSDLDGDLYF TWD NLIPPSK+SW PM+Y  AE K L R +   D
Sbjct: 848  FPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWLPMQYDAAEAKQLNRPVNHQD 907

Query: 907  IMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTGKLVTMP 966
            I++FFAKNM+NE+LG ICNAHVVHAD S++GALDENCI+L+ELAATAVDFPKTGKLVTMP
Sbjct: 908  IIDFFAKNMVNENLGAICNAHVVHADLSEYGALDENCIKLAELAATAVDFPKTGKLVTMP 967

Query: 967  PHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAY-----DDDDMITSRELNFTPGDV 1026
            PHLKPKLYPDFMGKE  QSY S KILG++YR+++D Y     DDDD  TS ELN   GD+
Sbjct: 968  PHLKPKLYPDFMGKEDYQSYNSNKILGRLYRQVKDDYNDDDDDDDDAATSSELNLVRGDI 1027

Query: 1027 HYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRKQ 1086
             YD DLEV+G+ D+I +AWDQKCSYDGQL GLL QYKV REEE+VTGHIWSMPK  SRKQ
Sbjct: 1028 PYDKDLEVSGSSDYILDAWDQKCSYDGQLKGLLAQYKVKREEEVVTGHIWSMPKCNSRKQ 1087

Query: 1087 GELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLKK 1146
            GELKE+LK SY +LKK+FRQVFE +  +FEQLT DE+N LYE+KASAWYQVAYHP W+ K
Sbjct: 1088 GELKERLKQSYHSLKKEFRQVFEKMDSDFEQLTEDEKNLLYEQKASAWYQVAYHPKWVNK 1147

Query: 1147 SLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1198
            S+EL+EPDA     MLSF WIAADYLARIKI+CR     D +KP+NSL  YL+DR+
Sbjct: 1148 SMELQEPDAAGCASMLSFAWIAADYLARIKIRCRGFDGVDTSKPVNSLVKYLADRI 1203

The following BLAST results are available for this feature:
BLAST of Csa2G381730 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RDR6_ARATH0.0e+0065.97RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana GN=RDR6 PE=1 SV=1[more]
SHL2_ORYSJ0.0e+0057.42Probable RNA-dependent RNA polymerase SHL2 OS=Oryza sativa subsp. japonica GN=SH... [more]
RDR1_ARATH7.8e-15835.50RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana GN=RDR1 PE=2 SV=1[more]
RDR2_ORYSJ3.1e-15435.85Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica GN=RDR2 ... [more]
RDR1_ORYSJ1.0e-14940.26Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica GN=RDR1 ... [more]
BLAST of Csa2G381730 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A067KP71_JATCU0.0e+0072.79Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07170 PE=4 SV=1[more]
B9RP51_RICCO0.0e+0070.99RNA-dependent RNA polymerase, putative OS=Ricinus communis GN=RCOM_0924060 PE=4 ... [more]
B9IKW9_POPTR0.0e+0070.52SILENCING DEFECTIVE 1 family protein OS=Populus trichocarpa GN=POPTR_0018s01670g... [more]
A0A067L2C2_JATCU0.0e+0071.54Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03988 PE=4 SV=1[more]
M5XL37_PRUPE0.0e+0071.26Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000422mg PE=4 SV=1[more]
BLAST of Csa2G381730 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G49500.10.0e+0065.97 RNA-dependent RNA polymerase 6[more]
AT1G14790.14.4e-15935.50 RNA-dependent RNA polymerase 1[more]
AT4G11130.17.5e-14333.02 RNA-dependent RNA polymerase 2[more]
AT2G05370.12.4e-2444.12 BEST Arabidopsis thaliana protein match is: RNA-dependent RNA polyme... [more]
AT2G19930.11.7e-2223.02 RNA-dependent RNA polymerase family protein[more]
BLAST of Csa2G381730 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|525507190|ref|NP_001267634.1|0.0e+00100.00RNA-dependent RNA polymerase 6-like [Cucumis sativus][more]
gi|659088868|ref|XP_008445204.1|0.0e+0097.08PREDICTED: RNA-dependent RNA polymerase 6 [Cucumis melo][more]
gi|802627169|ref|XP_012076580.1|0.0e+0072.79PREDICTED: RNA-dependent RNA polymerase 6-like [Jatropha curcas][more]
gi|1009137114|ref|XP_015885879.1|0.0e+0071.64PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba][more]
gi|255548928|ref|XP_002515520.1|0.0e+0070.99PREDICTED: RNA-dependent RNA polymerase 6 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007855RNA-dep_RNA_pol_euk-typ
Vocabulary: Molecular Function
TermDefinition
GO:0003968RNA-directed RNA polymerase activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048440 carpel development
biological_process GO:0048366 leaf development
biological_process GO:0010267 production of ta-siRNAs involved in RNA interference
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0048544 recognition of pollen
biological_process GO:0001172 transcription, RNA-templated
biological_process GO:0009616 virus induced gene silencing
biological_process GO:0010492 maintenance of shoot apical meristem identity
biological_process GO:0016246 RNA interference
cellular_component GO:0005634 nucleus
cellular_component GO:0031379 RNA-directed RNA polymerase complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003968 RNA-directed RNA polymerase activity
molecular_function GO:0003723 RNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU116132cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G381730.1Csa2G381730.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU116132CU116132transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007855RNA-dependent RNA polymerase, eukaryotic-typePANTHERPTHR23079RNA-DEPENDENT RNA POLYMERASEcoord: 1..1197
score:
IPR007855RNA-dependent RNA polymerase, eukaryotic-typePFAMPF05183RdRPcoord: 417..999
score: 1.4E
NoneNo IPR availablePANTHERPTHR23079:SF1PROTEIN RRF-3coord: 1..1197
score:

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa2G381730Cla022323Watermelon (97103) v1cuwmB107
Csa2G381730MELO3C011257Melon (DHL92) v3.5.1cumeB117
Csa2G381730ClCG08G013320Watermelon (Charleston Gray)cuwcgB165
Csa2G381730Lsi08G012030Bottle gourd (USVL1VR-Ls)culsiB140
Csa2G381730MELO3C011257.2Melon (DHL92) v3.6.1cumedB114
Csa2G381730Cla97C08G156700Watermelon (97103) v2cuwmbB159
Csa2G381730Bhi04G000785Wax gourdcuwgoB163
Csa2G381730CSPI02G23490Wild cucumber (PI 183967)cpicuB065
Csa2G381730Cucsa.162430Cucumber (Gy14) v1cgycuB233
Csa2G381730CmaCh05G003840Cucurbita maxima (Rimu)cmacuB792
Csa2G381730CmoCh05G003850Cucurbita moschata (Rifu)cmocuB785
Csa2G381730Cp4.1LG11g03220Cucurbita pepo (Zucchini)cpecuB105
Csa2G381730CsGy2G023250Cucumber (Gy14) v2cgybcuB057
Csa2G381730Carg09333Silver-seed gourdcarcuB0150
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G381730Wax gourdcuwgoB206
Csa2G381730Wax gourdcuwgoB208
Csa2G381730Cucumber (Chinese Long) v2cucuB049
Csa2G381730Cucumber (Chinese Long) v2cucuB059
Csa2G381730Cucumber (Chinese Long) v2cucuB085
Csa2G381730Cucumber (Gy14) v1cgycuB100
Csa2G381730Cucumber (Gy14) v1cgycuB449
Csa2G381730Cucurbita maxima (Rimu)cmacuB013
Csa2G381730Cucurbita maxima (Rimu)cmacuB164
Csa2G381730Cucurbita maxima (Rimu)cmacuB439
Csa2G381730Cucurbita moschata (Rifu)cmocuB004
Csa2G381730Cucurbita moschata (Rifu)cmocuB149
Csa2G381730Cucurbita moschata (Rifu)cmocuB427
Csa2G381730Melon (DHL92) v3.5.1cumeB125
Csa2G381730Melon (DHL92) v3.5.1cumeB151
Csa2G381730Watermelon (Charleston Gray)cuwcgB094
Csa2G381730Watermelon (Charleston Gray)cuwcgB101
Csa2G381730Watermelon (Charleston Gray)cuwcgB141
Csa2G381730Watermelon (Charleston Gray)cuwcgB162
Csa2G381730Watermelon (97103) v1cuwmB104
Csa2G381730Watermelon (97103) v1cuwmB118
Csa2G381730Watermelon (97103) v1cuwmB127
Csa2G381730Cucurbita pepo (Zucchini)cpecuB372
Csa2G381730Cucurbita pepo (Zucchini)cpecuB541
Csa2G381730Cucurbita pepo (Zucchini)cpecuB772
Csa2G381730Cucurbita pepo (Zucchini)cpecuB810
Csa2G381730Bottle gourd (USVL1VR-Ls)culsiB137
Csa2G381730Bottle gourd (USVL1VR-Ls)culsiB114
Csa2G381730Bottle gourd (USVL1VR-Ls)culsiB122
Csa2G381730Cucumber (Gy14) v2cgybcuB060
Csa2G381730Cucumber (Gy14) v2cgybcuB108
Csa2G381730Cucumber (Gy14) v2cgybcuB303
Csa2G381730Cucumber (Gy14) v2cgybcuB304
Csa2G381730Melon (DHL92) v3.6.1cumedB102
Csa2G381730Melon (DHL92) v3.6.1cumedB123
Csa2G381730Silver-seed gourdcarcuB0218
Csa2G381730Silver-seed gourdcarcuB0654
Csa2G381730Silver-seed gourdcarcuB0987
Csa2G381730Watermelon (97103) v2cuwmbB108
Csa2G381730Watermelon (97103) v2cuwmbB138
Csa2G381730Watermelon (97103) v2cuwmbB158
Csa2G381730Watermelon (97103) v2cuwmbB169