CmaCh05G003840 (gene) Cucurbita maxima (Rimu)

BLAST of CmaCh05G003840 vs. Swiss-Prot
Match: RDR6_ARATH (RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana GN=RDR6 PE=1 SV=1)

HSP 1 Score: 1681.4 bits (4353), Expect = 0.0e+00
Identity = 796/1198 (66.44%), Postives = 970/1198 (80.97%), Query Frame = 1

Query: 1    MGSEES-EKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDI 60
            MGSE + +K VVTQVSIGGF     A+ L  YLE E+G+V RCRLKTSWTPP SYP+F+I
Sbjct: 1    MGSEGNMKKSVVTQVSIGGFGESTTAKQLTDYLEDEVGIVWRCRLKTSWTPPGSYPNFEI 60

Query: 61   VNVADVIKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHV 120
             + +++   D+YKKV PHAFVHFA+ +SA  A+ AAG+  L L+ + LKVSLGP++PY +
Sbjct: 61   ADTSNIPSIDEYKKVEPHAFVHFAVFESAGRAMDAAGQCNLILDGQPLKVSLGPKNPYSL 120

Query: 121  NQRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAF 180
            NQRRRT VP+KL+ + ++IG L  +D F V+WR  + G+DFLVDPFD TCKFCF + TAF
Sbjct: 121  NQRRRTTVPYKLAGITLEIGTLVSRDDFFVSWR--AEGVDFLVDPFDNTCKFCFRKSTAF 180

Query: 181  SFKDNNKHTVLKCDYKVEFLVRDINQIKRYTDISCYVILLQLTSSPCIWYRTADDDIAKS 240
            SFKD   H V+ CDYK+E LVRDI  +++Y  +  +V++LQL SSP +WYRTADDDI  +
Sbjct: 181  SFKDAVMHAVINCDYKLELLVRDIQTVRQYKTLHGFVLILQLASSPRVWYRTADDDIYDT 240

Query: 241  VPYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLK 300
            VP DLLDDDDPWIRTTDFT  GAIGRC++YRV + PRY  KL  A++Y + +RV +  ++
Sbjct: 241  VPGDLLDDDDPWIRTTDFTQVGAIGRCHSYRVLISPRYENKLRTALDYFRMRRVQEERVR 300

Query: 301  RPPKILNEPDYGVQITDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRN 360
             PP+I NEP +G  ++DHFFCIH+KE ISFE++FLVN+V+H+G+ NQ Q+T+RFFDLLRN
Sbjct: 301  WPPRIRNEPCFGEPVSDHFFCIHHKEGISFEIMFLVNSVLHRGVFNQFQLTERFFDLLRN 360

Query: 361  QPNEVSLAALSHIHTYRHPVPDACKRLKHVQEWLLKNPRLWKRSKELVDIIEIRRLVITP 420
            QP +V++A+L H+ TY+ PV DA KRLK VQEW+ KNP+L    ++  DI EIRRLVITP
Sbjct: 361  QPKDVNIASLKHLCTYKRPVFDAYKRLKLVQEWIQKNPKLLGSHEQSEDISEIRRLVITP 420

Query: 421  SKAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSS 480
            ++AYC PPEVELSNRVLRR+K VA+RFLRVTFMDE M+ INS+V +Y+VAPIVK++TSSS
Sbjct: 421  TRAYCLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVAPIVKDLTSSS 480

Query: 481  FPQKTKIFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMG 540
            F QKT +F R+K IL  GF LCGRKYSFLA+S+NQLRD+SAWFF+E     V  I  WMG
Sbjct: 481  FSQKTYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKTRVSDIKTWMG 540

Query: 541  RFTNKNVAKCAARIGQCFSSTYATIEVPRNMVDHQLPDVERNDYIFSDGIGTITPDLAQE 600
            +F +KNVAKCAAR+G CFSSTYAT++V  + VD ++PD+ERN Y+FSDGIGTITPDLA E
Sbjct: 541  KFKDKNVAKCAARMGLCFSSTYATVDVMPHEVDTEVPDIERNGYVFSDGIGTITPDLADE 600

Query: 601  VADKLKLGGS-PPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSW 660
            V +KLKL     PCAYQIRYAG KGVVA WPSK DGIRLALR SM KF S H ILEICSW
Sbjct: 601  VMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSMKKFFSKHTILEICSW 660

Query: 661  TRFQPGFLNRQIITLLSTLNVPDENFWSMQETMVSKLDRMITDTNVAFDVLTASCAEQGN 720
            TRFQPGFLNRQIITLLS L VPDE FW MQE+M+ KL+R++ DT+VAF+VLTASCAEQGN
Sbjct: 661  TRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAFEVLTASCAEQGN 720

Query: 721  AAAIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQEG 780
             AAIMLSAGF+P+TEPHLRGML  +R AQLWGLREK+RIFVT GRW MGC DE+ +L+ G
Sbjct: 721  TAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWLMGCLDEAGILEHG 780

Query: 781  QCFIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPEL 840
            QCFIQVS P +E CFSKHGS F ETK +L V++G V IAKNPCLHPGDVRILEAVD P+L
Sbjct: 781  QCFIQVSKPSIENCFSKHGSRFKETKTDLEVVKGYVAIAKNPCLHPGDVRILEAVDVPQL 840

Query: 841  HHLYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTL 900
            HH+YDCL+FPQ G+RPHTNEASGSDLDGDLYF+ WD+ LIPP+RKS+P M+Y AAE K+L
Sbjct: 841  HHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPNRKSYPAMHYDAAEEKSL 900

Query: 901  TREVTRLDIMEFFAKNMINESLGTICNAHVVHADRSEYGALDENCIKLSELAATAVDFPK 960
             R V   DI++FFA+N+ NE LGTICNAHVVHADRSEYGA+DE C+ L+ELAATAVDFPK
Sbjct: 901  GRAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECLLLAELAATAVDFPK 960

Query: 961  TGKIVTMPPHLKPKLYPDFMGKQATQSYKSTKILGRMYRRIRDVYDEDMITACELNFTPG 1020
            TGKIV+MP HLKPKLYPDFMGK+  Q+YKS KILGR+YRR+++VYDED   + E +  P 
Sbjct: 961  TGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRRVKEVYDEDAEASSEESTDPS 1020

Query: 1021 DVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLLGQYKVSREEEIVTGHIWSMPKYSSR 1080
             + YD  LE+ G  D I EAW  KC YDGQL GLLGQYKV +EEEIVTGHIWSMPKY+S+
Sbjct: 1021 AIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYTSK 1080

Query: 1081 KQGELKEKLKHSYTTLKKEFRQVFENIGPEFEQLTDDERNALYERKASAWYQVTYHPTWL 1140
            KQGELKE+LKHSY +LKKEFR+VFE   P+ E L+++E+N LYE+KASAWY VTYHP W+
Sbjct: 1081 KQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKASAWYHVTYHPEWV 1140

Query: 1141 KKSMELREPDIAEATPMLSFPWVAVDYLARIKIKCRKMKSVDPTKPINSLASYLSDRM 1197
            KKS+EL++PD +    MLSF W+A DYLARIKI+ R+M S+D  KP++SLA +L+ R+
Sbjct: 1141 KKSLELQDPDESSHAAMLSFAWIAADYLARIKIRSREMGSIDSAKPVDSLAKFLAQRL 1196

BLAST of CmaCh05G003840 vs. Swiss-Prot
Match: SHL2_ORYSJ (Probable RNA-dependent RNA polymerase SHL2 OS=Oryza sativa subsp. japonica GN=SHL2 PE=2 SV=1)

HSP 1 Score: 1419.4 bits (3673), Expect = 0.0e+00
Identity = 691/1198 (57.68%), Postives = 880/1198 (73.46%), Query Frame = 1

Query: 9    IVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDI----VNVAD 68
            +V TQVS+GGFD+ V A DL  +LE E+GLV RCR+KTSWTPP+SYPDF +     + + 
Sbjct: 27   LVTTQVSLGGFDAGVAAGDLADFLEHEVGLVWRCRVKTSWTPPDSYPDFALPTAPASASA 86

Query: 69   VIKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVNQRRR 128
                  Y +V PHAFVHFA P+ A  A   AG   L L  + L+V+  P+S   V+ RR 
Sbjct: 87   AAAPPRYDRVPPHAFVHFARPEGARRAADLAGETRLILRGKPLRVASAPDSSLRVS-RRS 146

Query: 129  TKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFSFKDN 188
            +  PF+  +V +++G L     F  AWRGP +G+D  VDPFDG C+  FTRDTAF+F   
Sbjct: 147  SIAPFRFPDVRLEVGALPSPGAFLAAWRGPDAGLDLSVDPFDGCCRLVFTRDTAFTFPGF 206

Query: 189  NKHTVLKCDYKVEFLVRDINQIKRYTDISCYVILLQLTSSPCIWYRTADDDIAKSVPYDL 248
             +   ++CD K+EF VRD+ +++ Y  + C  +LL+L ++P + YRTADDD  + VP+DL
Sbjct: 207  REVAAIRCDVKLEFPVRDVLEVRLYR-LDCS-LLLRLAAAPLVHYRTADDDFHEPVPFDL 266

Query: 249  LDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASL------ 308
            LDDDDPWIRTTD T SGAIGRC  YR+S   R+  K++ A++Y++E+RV           
Sbjct: 267  LDDDDPWIRTTDITPSGAIGRCGVYRISFSARFWPKMDRALDYMRERRVAIVDCGGGWGP 326

Query: 309  KRPPKILNEPDYGVQITDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLR 368
            +R   + +E ++G  + D FFC+ + E + F LLF+VNA++HKGIINQHQ+T  FF LL 
Sbjct: 327  RRGLTVRDELEFGEPMQDVFFCLQHAEGLKFPLLFMVNALVHKGIINQHQLTPEFFSLLG 386

Query: 369  NQPNEVSLAALSHIHTYRHPVPDACKRLKHVQEWLLKNPRLWKRSKELVDIIEIRRLVIT 428
                 V++AAL      + PV DAC RLK     + +NP+L   SK   D  E+RRLVIT
Sbjct: 387  RSEENVNVAALRDFWGDKFPVFDACGRLKKALNRVARNPKLLC-SKVGDDHAEVRRLVIT 446

Query: 429  PSKAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSS 488
            P++AYC PPEVE SNRVLR + +VADRFLRVTFMDEGM+ +N++V   + APIVK++ S+
Sbjct: 447  PTRAYCLPPEVERSNRVLRHYHEVADRFLRVTFMDEGMQVLNNNVLNSFTAPIVKDLMSN 506

Query: 489  SFPQKTKIFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWM 548
             F QKT ++ R++ +L  GF++CGRKYSFLA+SSNQLRD+SAWFF+E +  TV++I +WM
Sbjct: 507  FFQQKTTVYKRVRMLLTEGFHMCGRKYSFLAFSSNQLRDKSAWFFAEDRKTTVEAIRKWM 566

Query: 549  GRFTNKNVAKCAARIGQCFSSTYATIEVPRNMVDHQLPDVERNDYIFSDGIGTITPDLAQ 608
            GRFT+KNVAK AAR+GQCFSSTYAT+ +  + VD    DV  N+YIFSDGIG ITPDLA 
Sbjct: 567  GRFTSKNVAKHAARMGQCFSSTYATVTMRPDEVDESFDDVVHNEYIFSDGIGKITPDLAL 626

Query: 609  EVADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSW 668
            EVA++L+L  +PP AYQIR+AG KGV+A W   GDG RL LRPSM KF+S+H +LE+ SW
Sbjct: 627  EVAERLQLTDNPPSAYQIRFAGFKGVIAVWQGHGDGTRLFLRPSMRKFESNHLVLEVVSW 686

Query: 669  TRFQPGFLNRQIITLLSTLNVPDENFWSMQETMVSKLDRMITDTNVAFDVLTASCAEQGN 728
            T+FQPGFLNRQII LLS+LNVPD  FW MQETM+S L+ +++D +VAF+VLT SCA+ GN
Sbjct: 687  TKFQPGFLNRQIIILLSSLNVPDSIFWQMQETMLSNLNNILSDRDVAFEVLTTSCADDGN 746

Query: 729  AAAIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQEG 788
             AA+MLSAGFEP+TEPHL+ ML+ IR+AQL  L EKARIFV  GRW MGC DE  VL++G
Sbjct: 747  TAALMLSAGFEPRTEPHLKAMLLAIRSAQLQDLLEKARIFVPKGRWLMGCLDELGVLEQG 806

Query: 789  QCFIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPEL 848
            QCFI+ + P L   F KHGS F  T  N  VI GTVVIAKNPCLHPGDVRILEAVD PEL
Sbjct: 807  QCFIRATVPSLNSYFVKHGSRFSSTDKNTEVILGTVVIAKNPCLHPGDVRILEAVDVPEL 866

Query: 849  HHLYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTL 908
            HHL DCLVFPQ GERPH NEASGSDLDGDLYF+TWDE LIPP +KSW PM+Y   E K L
Sbjct: 867  HHLVDCLVFPQKGERPHANEASGSDLDGDLYFVTWDEKLIPPGKKSWNPMDYSPPEAKQL 926

Query: 909  TREVTRLDIMEFFAKNMINESLGTICNAHVVHADRSEYGALDENCIKLSELAATAVDFPK 968
             R+V++ DI++FF KNMI+E+LG ICNAHVVHAD SEYGA+DE CI L+ELAATAVDFPK
Sbjct: 927  PRQVSQHDIIDFFLKNMISENLGRICNAHVVHADLSEYGAMDEKCIHLAELAATAVDFPK 986

Query: 969  TGKIVTMPPHLKPKLYPDFMGKQATQSYKSTKILGRMYRRIRDVYDEDMITACELNFTPG 1028
            TGK+  MPPHLKPK+YPDFMGK+  QSYKS KILGR+YR I++  + D+++  +   TP 
Sbjct: 987  TGKLAIMPPHLKPKVYPDFMGKEDGQSYKSEKILGRLYRSIQEASNGDVVS--QEVCTPN 1046

Query: 1029 DVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLLGQYKVSREEEIVTGHIWSMPKYSSR 1088
            D+ YD+DLEV GA+DF+A AW  KCSYD QLS LL QY+V  E E+VTGHI  + K SS+
Sbjct: 1047 DLPYDIDLEVPGASDFLASAWQCKCSYDAQLSALLSQYRVRTEAELVTGHITFLVKNSSK 1106

Query: 1089 KQGELKEKLKHSYTTLKKEFRQVFENIGPEFEQLTDDERNALYERKASAWYQVTYHPTWL 1148
            KQG++K++LK +Y+ L+KEF+  FE+I  +  ++ DDE+N LYE KASAWYQVTYHP W+
Sbjct: 1107 KQGDIKDRLKTAYSALRKEFKSTFESIASDQCEIGDDEKNLLYEMKASAWYQVTYHPKWV 1166

Query: 1149 KKSMELREPDIAEATPMLSFPWVAVDYLARIKIKCRKMKSVDPTKPINSLASYLSDRM 1197
            +KS  +  PD  E    LSF W+ VDYLARIK++C     V+  KP+  LA+Y+S+R+
Sbjct: 1167 EKSRGILGPDGEEIPASLSFAWIPVDYLARIKLRCHGKVRVEGQKPVERLAAYISERI 1218

BLAST of CmaCh05G003840 vs. Swiss-Prot
Match: RDR1_ARATH (RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana GN=RDR1 PE=2 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 3.1e-162
Identity = 351/999 (35.14%), Postives = 545/999 (54.55%), Query Frame = 1

Query: 193  DYKVEFLVRDINQIKRYTDI--SCYVILLQLTSSPCIWYRTADDDIAKSVPYDLLD---- 252
            DY++E    +I QI  ++    S   +++Q+  +P I+ +   +D   ++ + ++D    
Sbjct: 143  DYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAPKIFEK---EDQPINLLFGIMDFYSD 202

Query: 253  -DDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIK--LNNAMNYLKEQRVHQASLKRPPK 312
              D+ WIRTTDFT S  IG+   + + +P    +     N  NY  E R     ++    
Sbjct: 203  GSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNVPDFRENFANYA-EHRASSFLIESGSS 262

Query: 313  ILNEPDYGVQITDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRNQPNE 372
              +  +  V + D          + FE+LF +N ++    ++   +   F+ LL  +  +
Sbjct: 263  YSSNANTLVPVVDP----PPGFSLPFEILFKLNTLVQNACLSGPALDLDFYRLLNQKKYD 322

Query: 373  VSLAALSHIHTYRHPVPDACKRLKH-----VQEWLLKNPRLWKRSKELVD-IIEIRRLVI 432
             +L  + H       + + C    H      ++W+ K       +  L D ++ + R+ +
Sbjct: 323  RAL--IDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGKLPLSPTISLDDGLVYMYRVQV 382

Query: 433  TPSKAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITS 492
            TP++ Y   PEV +SNRVLR +    + FLRV+F+DE ++K+ S   +            
Sbjct: 383  TPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVRSMDLS----------PR 442

Query: 493  SSFPQKTKIFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRW 552
            SS  ++TK++ R+  +L+ G  +  +K+ FLA+SS+QLR+ SAW F+    +T   I  W
Sbjct: 443  SSTQRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDRITAAHIRAW 502

Query: 553  MGRFTN-KNVAKCAARIGQCFSSTYATIEVPRNMVDHQLPDVE----RNDYIFSDGIGTI 612
            MG F + +NVAK AAR+GQ FSS+  T+ V  + ++  +PDVE       Y+FSDGIG I
Sbjct: 503  MGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIE-VIPDVEIISLGTRYVFSDGIGKI 562

Query: 613  TPDLAQEVADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRI 672
            + + A++VA K  L    P A+QIRY G KGVVA  P+     +L+LR SM+KF+S++  
Sbjct: 563  SAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSK--KLSLRKSMSKFESENTK 622

Query: 673  LEICSWTRFQPGFLNRQIITLLSTLNVPDENFWSMQETMVSKLDRMITDTNVAFDVLTAS 732
            L++ +W+++QP ++NRQ+ITLLSTL V D  F   Q  +V +LD ++T    A + L   
Sbjct: 623  LDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPLEAHEALGLM 682

Query: 733  C-AEQGNAAAIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDE 792
               E  N    ++  G++P  EP L  ML   RA++L  LR K RIF++ GR  MGC DE
Sbjct: 683  APGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGGRSMMGCLDE 742

Query: 793  SAVLQEGQCFIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILE 852
            +  L+ GQ  +Q S P+      + G  F        +I G VV+AKNPCLHPGDVR+L+
Sbjct: 743  TRTLEYGQVVVQYSDPM------RPGRRF--------IITGPVVVAKNPCLHPGDVRVLQ 802

Query: 853  AVDAPELHHLYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYV 912
            AV+ P L+H+ DC+VFPQ G RPH NE SGSDLDGD+YF+ WD+ L+PP  ++  PM+Y 
Sbjct: 803  AVNVPALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPP--RTSEPMDYT 862

Query: 913  AAEVKTLTREVTRLDIMEFFAKNMINESLGTICNAHVVHADRSEYGALDENCIKLSELAA 972
                + L  +VT  ++ E+FA  ++N+SLG I NAH   AD+    A  + CI+L++  +
Sbjct: 863  PEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELAKKFS 922

Query: 973  TAVDFPKTGKIVTMPPHLKPKLYPDFMGKQATQSYKSTKILGRMYRRIRDVYDEDMITAC 1032
            TAVDFPKTG    +P HL  K YPDFM K    +Y+S  ++G+++R +++     +I+  
Sbjct: 923  TAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKE-RAPPLISIK 982

Query: 1033 ELNFTPGDVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLLGQYKVSREEEIVTGHIWS 1092
                      YD D+EV G  +++ EA+ QK +YD +L  L+  Y +  E EI++G I  
Sbjct: 983  SFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGGIMR 1042

Query: 1093 MPKYSSRKQGELKEKLKHSYTTLKKEFRQVFENIGPEFEQLTDDERNALYERKASAWYQV 1152
            M K  ++++    E +  +   L+KE   +F          +++E N     KASAWY V
Sbjct: 1043 MSKSFTKRRD--AESIGRAVRALRKETLSLF--------NASEEEENE--SAKASAWYHV 1084

Query: 1153 TYHPTWLKKSMELREPDIAEATPMLSFPWVAVDYLARIK 1171
            TYH ++     E    D       LSF W   D L RIK
Sbjct: 1103 TYHSSYWGLYNEGLNRD-----HFLSFAWCVYDKLVRIK 1084

BLAST of CmaCh05G003840 vs. Swiss-Prot
Match: RDR2_ORYSJ (Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica GN=RDR2 PE=2 SV=1)

HSP 1 Score: 554.3 bits (1427), Expect = 3.3e-156
Identity = 365/1021 (35.75%), Postives = 532/1021 (52.11%), Query Frame = 1

Query: 194  YKVEFLVRDINQIKRYTDISCYVILLQLTSSPCIWYRTADDDIAKSVPYDLL-----DDD 253
            YK+E L  D+      T      ILLQL  +P I    +   +      D       D  
Sbjct: 155  YKLEVLFEDMKDCLGCTLDGMGAILLQLNYAPRIHTAISGPAVNSRFMDDRFHACKEDAK 214

Query: 254  DPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLKRPPKILNEP 313
              W+R  DFT + + GRC+T          +KL  +       +    S       +N  
Sbjct: 215  FSWVRALDFTPNYSFGRCSTLV--------LKLGKSALVSDILKSLPFSGNLGELTMNSM 274

Query: 314  DYGVQITDHFF-CIHYKEDIS--FELLFLVNAVMHKGIINQHQMTDRFFDLLRNQPNEVS 373
            D GV  + +    +H   D S  +E+LF +N++MH G I    +    F  L+  P +VS
Sbjct: 275  D-GVGASSNVVPLVHCPRDYSVPYEVLFRLNSLMHMGKIVAKHVNADLFKALQELPVDVS 334

Query: 374  LAALSHIHTYRHP-------VPDACKRLKHVQEWLLKNPRLWKRSKELVDIIEIRRLVIT 433
                  +H            +      +K     LL N    +  ++L+   +  R+ IT
Sbjct: 335  RRIFEKMHKLESTCYGPLQFIQQEAYSMKRSHNVLLSNEGEGEGERKLM---KCYRVNIT 394

Query: 434  PSKAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSS 493
            PSK +CF PE E++N V++     A  F+RVTF+DE   K++S+  +  +     E    
Sbjct: 395  PSKIFCFGPEEEVTNYVVKHHSAYASDFVRVTFVDEDWSKLSSNAISARI-----EQGFF 454

Query: 494  SFPQKTKIFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWM 553
            S P KT ++ R+  ILK GF +  + + FLA+S++QLR  S W F+    +    I RWM
Sbjct: 455  SKPFKTGLYYRILSILKKGFSIGPKNFEFLAFSASQLRGNSVWMFASNASLNAGGIRRWM 514

Query: 554  GRFTN-KNVAKCAARIGQCFSSTYATIEVPRNMVDHQLPDVE----RNDYIFSDGIGTIT 613
            G F N ++V+KCAAR+GQ FSS+  T EV R  V+  +PD+E     + YIFSDGIG I+
Sbjct: 515  GHFENIRSVSKCAARMGQLFSSSRQTFEVLRWDVE-VIPDIEITTDGSKYIFSDGIGKIS 574

Query: 614  PDLAQEVADKLKLGGSP-PCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRI 673
               A+ VA  + L  +  P A+QIRY G KGV+A  P     I L+LRPSM KF+S+ R+
Sbjct: 575  LRFAKRVAHHVGLDPTNLPSAFQIRYGGYKGVIAIDPMSS--IDLSLRPSMKKFESESRM 634

Query: 674  LEICSWTRFQPGFLNRQIITLLSTLNVPDENFWSMQETMVSKLDRMITDTNVAFDVLTAS 733
            L I SW++ QP ++NR+II+LLSTL + DE F +MQ+  + + + M+T+  VA  VL   
Sbjct: 635  LNITSWSKSQPCYVNREIISLLSTLGIRDEIFVAMQQDEMRETEEMLTNKEVALSVLGKL 694

Query: 734  CAEQGNAAAIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDES 793
               +   A  ML  G+EP +EP+L  +L   +  +L  +R + +I V  GR  +GC DE+
Sbjct: 695  GGSETKTAVKMLLQGYEPSSEPYLSMILKAHQENRLTDIRTRCKIHVPKGRVLIGCLDET 754

Query: 794  AVLQEGQCFIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEA 853
             VL+ GQ +I+++    E+  S     +++     TV+ G V I KNPCLHPGD+R+LEA
Sbjct: 755  GVLEYGQVYIRITKNSKEQKDSNQSYFYNDDGKTATVV-GKVAITKNPCLHPGDIRVLEA 814

Query: 854  VDAPELHHLYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVA 913
            +  P+L  + DCLVFPQ GERPH NE SG DLDGDLYFITWD+ LIP   K   PM+Y A
Sbjct: 815  IYDPDLVGMVDCLVFPQRGERPHPNECSGGDLDGDLYFITWDDKLIP--EKVDTPMDYTA 874

Query: 914  AEVKTLTREVTRLDIMEFFAKNMINESLGTICNAHVVHADRSEYGALDENCIKLSELAAT 973
               + +   VT  +I + F   MIN+SLG I  AH++HADRS   A    C++L+ L + 
Sbjct: 875  TRPRIMDHVVTLEEIQKHFVDYMINDSLGAISTAHLIHADRSPLKARSPECLQLATLHSM 934

Query: 974  AVDFPKTGKIVTMPPHLKPKLYPDFMGKQATQSYKSTKILGRMYR----RIRDVYDEDMI 1033
            AVDF KTG    MP  L+P+ YPDFM +     Y S  +LG++YR     +    D   +
Sbjct: 935  AVDFAKTGAPAEMPRTLRPREYPDFMERWEKPMYISNGVLGKLYRSAMGHMEKSGDSGAL 994

Query: 1034 TACELNFTPGDVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLLGQYKVSREEEIVTGH 1093
            ++     +P    YD DLEV G+ +F+  A      Y+ +L+ L+  Y+   E+EI+TG+
Sbjct: 995  SSSSAQPSP---TYDPDLEVPGSDEFLQAAEEYYELYEEKLTTLMNYYRAELEDEILTGN 1054

Query: 1094 IWSMPKY---SSRKQGELKEKLKHSYTTLKKEFRQVFENIGPEFEQLTDDERNALYERKA 1153
            I +   Y    +++  E+K+++  +   L +E R            L    +     R A
Sbjct: 1055 IRNKMLYLKRDNKRYFEMKDRIVAAVDALHREAR----------GWLLSSRKEEDASRMA 1114

Query: 1154 SAWYQVTYHPTWLKKSMELREPDIAEATPMLSFPWVAVDYLARIK----IKCRKMKSVDP 1183
            SAWY+VTYH            PD        SFPW+A D L  IK    ++ R+ K  D 
Sbjct: 1115 SAWYRVTYH------------PDRRRGKRFWSFPWIACDNLLAIKASSQLRRRRQKDDDS 1127

BLAST of CmaCh05G003840 vs. Swiss-Prot
Match: RDR1_ORYSJ (Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica GN=RDR1 PE=2 SV=2)

HSP 1 Score: 539.3 bits (1388), Expect = 1.1e-151
Identity = 310/770 (40.26%), Postives = 445/770 (57.79%), Query Frame = 1

Query: 420  SKAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSS 479
            S  Y + PE+ +SNRV+R F    + FLR++F+DE  +K+ +         +     S  
Sbjct: 7    STVYFYGPEINVSNRVVRNFSSDIENFLRISFVDEDCEKLRA-------TDLSPRSASGH 66

Query: 480  FPQKTKIFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMG 539
               +T ++ R+  +L  G  + G+ + FLA+SS+QLRD SAW F+  + +    I  WMG
Sbjct: 67   DANRTALYKRVLSVLSDGITIGGKNFEFLAFSSSQLRDNSAWMFASRQGLAASDIRTWMG 126

Query: 540  RFTN-KNVAKCAARIGQCFSSTYATIEVPRNMVDHQLPDVER-NDYIFSDGIGTITPDLA 599
             F N +NVAK AAR+GQ FSS+  T++V +  V+ ++ D++    ++FSDGIG I+   A
Sbjct: 127  DFRNIRNVAKYAARLGQSFSSSTETLKVQKYEVE-EISDIKNGTQHVFSDGIGKISSAFA 186

Query: 600  QEVADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICS 659
             EVA K  L    P A+QIRY G KGVVA  P+     +L+LR SM KFQSD+  +++ +
Sbjct: 187  NEVAMKCNLKRFAPSAFQIRYGGYKGVVAVDPT--SRWKLSLRKSMLKFQSDNITVDVLA 246

Query: 660  WTRFQPGFLNRQIITLLSTLNVPDENFWSMQETMVSKLDRMITDTNVAFDVL-TASCAEQ 719
            ++++QPGFLNRQ+ITLLSTL V D  F   QE  V++L++M+TD   A + +      E 
Sbjct: 247  YSKYQPGFLNRQLITLLSTLGVRDSVFEQKQEEAVNQLNKMVTDPQAAIEAIELMPMGEI 306

Query: 720  GNAAAIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQ 779
             NA   +L  G++P  EP+L  +L   RA++L  L+ K+RI +  GR  MGC DE+  L+
Sbjct: 307  TNAVKELLLCGYQPDDEPYLSMLLQTFRASKLLELKTKSRILIPKGRAMMGCLDETRTLK 366

Query: 780  EGQCFIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAP 839
             GQ FI+ ++ +                N+   + G VVIAKNPCLHPGD+RIL AVD P
Sbjct: 367  YGQVFIRATSGV--------------NDNDRFTVTGKVVIAKNPCLHPGDIRILHAVDVP 426

Query: 840  ELHHLYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVK 899
             LHH+++C+VFPQ G RPH NE SGSDLDGD+YF++WD +LIPP  +   PM+Y  A  +
Sbjct: 427  VLHHMFNCVVFPQQGPRPHPNECSGSDLDGDIYFVSWDPSLIPP--RMVTPMDYTPAPTE 486

Query: 900  TLTREVTRLDIMEFFAKNMINESLGTICNAHVVHADRSEYGALDENCIKLSELAATAVDF 959
            TL  +VT  ++ E+F   ++NESLG I NAHVV AD+ +  A    CI+L++L + AVDF
Sbjct: 487  TLDHDVTIEEVEEYFTNYIVNESLGMIANAHVVFADKEDLKAESSPCIELAKLFSIAVDF 546

Query: 960  PKTGKIVTMPPHLKPKLYPDFMGKQATQSYKSTKILGRMYRRIRDVYDEDMITACELNFT 1019
            PKTG    +PP L  K YPDFM K    +Y+S  ++G++YR I+        T    +FT
Sbjct: 547  PKTGVPALIPPELHVKEYPDFMEKLDKVTYESKGVIGKLYREIK------KHTPHIKHFT 606

Query: 1020 --PGDVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLLGQYKVSREEEIVTGHIWSMPK 1079
                   YD D+ V G  D+I EA   K  YD +L  L+  Y +  E EI++G I  M K
Sbjct: 607  REVARRSYDTDMIVDGYEDYITEAMALKDEYDFKLGNLMDHYGIKSEAEIISGCILKMAK 666

Query: 1080 YSSRKQGELKEKLKHSYTTLKKEFRQVFENIGPEFEQLTDDERNA--LYERKASAWYQVT 1139
              ++K     + ++ +  +L+KE R  F       E   DD  +     E KASAWY VT
Sbjct: 667  NFTKKSD--ADAIRLAVRSLRKEARSRFS------EMSLDDNGHGHDASEAKASAWYHVT 726

Query: 1140 YHPT-WLKKSMELREPDIAEATPMLSFPWVAVDYLARIKIKCRKMKSVDP 1182
            YHP  W   +     P        +SFPW   + L RIK + + ++ + P
Sbjct: 727  YHPEFWGCYNEGYERPH------FISFPWCIYEKLLRIKQRRKFVRKMQP 730

BLAST of CmaCh05G003840 vs. TrEMBL
Match: E9NWL0_CUCSA (RNA-dependent RNA polymerase 6 OS=Cucumis sativus GN=Csa_2G381730 PE=2 SV=1)

HSP 1 Score: 2257.3 bits (5848), Expect = 0.0e+00
Identity = 1076/1197 (89.89%), Postives = 1140/1197 (95.24%), Query Frame = 1

Query: 1    MGSEESEKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDIV 60
            MGSEE EKIVVTQVS GGFDSDVKA+DLMSYLESEIGLVDRCRLKTSWTPPESYPDF++ 
Sbjct: 1    MGSEEGEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS 60

Query: 61   NVADVIKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVN 120
            NVA+VIKSDDYKKVVPHAFVHF  PDSAA ALHAAGR EL  ND+LLK SLGPESP+H+N
Sbjct: 61   NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHIN 120

Query: 121  QRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFS 180
            QRRRTKVPFKLS+V VDIGNLTC DGFSVAWRGPSSGMDFLVDPFDGTCKFCFT+DTAFS
Sbjct: 121  QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS 180

Query: 181  FKDNNKHTVLKCDYKVEFLVRDINQIKRYTDISCYVILLQLTSSPCIWYRTADDDIAKSV 240
            FKDNNKHT LKCDYK+EF+VRDINQI RYTD SCYVILLQLT+SPCIWYRTADDDIAK V
Sbjct: 181  FKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKLV 240

Query: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLKR 300
            PYDLLDDDDPWIRTTDFTISGAIGRCNT+RVSVPPRYGIKLNNAMNYLKEQRVHQ SL R
Sbjct: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR 300

Query: 301  PPKILNEPDYGVQITDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRNQ 360
            PPKILNEPDYGVQ+TDHFFCI YK+DISFE+LFLVNAVMHKGIINQHQM+DRFFDLLRNQ
Sbjct: 301  PPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ 360

Query: 361  PNEVSLAALSHIHTYRHPVPDACKRLKHVQEWLLKNPRLWKRSKELVDIIEIRRLVITPS 420
            PNEV+LAALSHIH +R PV DACK+LK VQEWLLKNP L KRSKELVDI+EIRRLVITPS
Sbjct: 361  PNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPS 420

Query: 421  KAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480
            KAYCFPPEVELSNRVLRR+KDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF
Sbjct: 421  KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480

Query: 481  PQKTKIFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMGR 540
            PQKTKIF RMKHILKHGF+LCGRKYSFLAYSSNQLRDQSAWFF+ECK ++VD+IL WMG+
Sbjct: 481  PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGK 540

Query: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVDHQLPDVERNDYIFSDGIGTITPDLAQEV 600
            FTNKNVAKCAARIGQCFSSTYATIEVPRNMV+H L DVERN Y+FSDGIGTITPDLAQEV
Sbjct: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEV 600

Query: 601  ADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWTR 660
            ADKLK+ GSPPCAYQIRYAG KGVVA+WPSK DGIRLALRPSMNKF+S+HRILEICSWTR
Sbjct: 601  ADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTR 660

Query: 661  FQPGFLNRQIITLLSTLNVPDENFWSMQETMVSKLDRMITDTNVAFDVLTASCAEQGNAA 720
            FQPGFLNRQIITLLSTL+VPDE FWSMQETM+SKLDRMITDT+VAF+VLTASCAEQGNAA
Sbjct: 661  FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA 720

Query: 721  AIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQEGQC 780
            AIMLSAGFEP+TEPHLRGMLMCIRAAQLWGLREKARIFVT+GRWCMGCFDES VLQEGQC
Sbjct: 721  AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC 780

Query: 781  FIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840
            FIQVSTPLLE+CFSKHGSLF ETKNNLTV+RGTVVIAKNPCLHPGDVRILEAVDAPELHH
Sbjct: 781  FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840

Query: 841  LYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTLTR 900
            LYDCLVFP+NGERPHTNEASGSDLDGDLYF TWD NLIPPS+KSWPPM Y  AEVKTL R
Sbjct: 841  LYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQR 900

Query: 901  EVTRLDIMEFFAKNMINESLGTICNAHVVHADRSEYGALDENCIKLSELAATAVDFPKTG 960
            ++TR DIMEFFAKNMINESLGTICNAHVVHADRS++GALDENCI+LSELAATAVDFPKTG
Sbjct: 901  KITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTG 960

Query: 961  KIVTMPPHLKPKLYPDFMGKQATQSYKSTKILGRMYRRIRDVY-DEDMITACELNFTPGD 1020
            K+VTMPPHLKPKLYPDFMGK+ATQSYKSTKILG+MYRRIRD Y D+DMIT+ ELNFTPGD
Sbjct: 961  KLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD 1020

Query: 1021 VYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLLGQYKVSREEEIVTGHIWSMPKYSSRK 1080
            V+YDVDLEVAGA DFIAEAW+QKCSYDGQLSGLLGQYKV+REEEIVTGHIWSMPKY SRK
Sbjct: 1021 VHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK 1080

Query: 1081 QGELKEKLKHSYTTLKKEFRQVFENIGPEFEQLTDDERNALYERKASAWYQVTYHPTWLK 1140
            QGELKEKLKHSY+TLKK+FRQVFEN+GPEFEQLT DERNALYE+KASAWYQV YHPTWLK
Sbjct: 1081 QGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLK 1140

Query: 1141 KSMELREPDIAEATPMLSFPWVAVDYLARIKIKCRKMKSVDPTKPINSLASYLSDRM 1197
            KS+ELREPD  EA PMLSFPW+A DYLARIKIKCR+ KS DPTKPINSLASYLSDRM
Sbjct: 1141 KSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1197

BLAST of CmaCh05G003840 vs. TrEMBL
Match: A0A067KP71_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07170 PE=4 SV=1)

HSP 1 Score: 1851.3 bits (4794), Expect = 0.0e+00
Identity = 873/1198 (72.87%), Postives = 1022/1198 (85.31%), Query Frame = 1

Query: 1    MGSEESEK-IVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDI 60
            M +++SEK  VVTQVS GGFD+ VKA+DL++YLE EIG V RCRLKTSWTPPESYP+F+I
Sbjct: 1    METQKSEKDTVVTQVSFGGFDNHVKAKDLVAYLEEEIGQVWRCRLKTSWTPPESYPNFEI 60

Query: 61   VNVADVIKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHV 120
             + A + ++ +YK+V PHAFVHFA  +SA  A +AAG  ELFLNDR LKVSLGPE+P+H+
Sbjct: 61   TDAAAIHRTHEYKRVEPHAFVHFASAESATWAKNAAGHCELFLNDRPLKVSLGPENPFHL 120

Query: 121  NQRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAF 180
            NQRRR  +PFKLS+V ++IG L  +D F V WRGPSSG+DFLVDPFDGTCKFCFT DTAF
Sbjct: 121  NQRRRKNIPFKLSDVCIEIGTLVSRDEFLVGWRGPSSGVDFLVDPFDGTCKFCFTMDTAF 180

Query: 181  SFKDNNKHTVLKCDYKVEFLVRDINQIKRYTDISCYVILLQLTSSPCIWYRTADDDIAKS 240
            S KD  KH +++CD+K+EFLVRDIN++K+YTD SC VILLQL S+P +WYRTADDDI  S
Sbjct: 181  SIKDTTKHAIIRCDFKLEFLVRDINEVKQYTDTSCIVILLQLASAPLVWYRTADDDIEVS 240

Query: 241  VPYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLK 300
            VP+DLLDDDDPWIRTTDFT SGAIGRCN YRVS+PPR+G KL  A N+LKE+RV + SL+
Sbjct: 241  VPFDLLDDDDPWIRTTDFTPSGAIGRCNFYRVSIPPRHGAKLKRARNFLKERRVQEDSLR 300

Query: 301  RPPKILNEPDYGVQITDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRN 360
            RP KI+NEPDYG+ ++D FFCIH+KE I+FE++FLVNAVMHKGI NQHQ++D FFDLLRN
Sbjct: 301  RPLKIVNEPDYGMPMSDPFFCIHHKEGIAFEIMFLVNAVMHKGIFNQHQLSDNFFDLLRN 360

Query: 361  QPNEVSLAALSHIHTYRHPVPDACKRLKHVQEWLLKNPRLWKRSKELVDIIEIRRLVITP 420
            Q  ++++AAL HI +Y+ PV DA K LK VQEWLLKNP+L+KRSK+L DI+EIRRL +TP
Sbjct: 361  QSLDINVAALKHICSYKQPVFDAHKGLKAVQEWLLKNPKLFKRSKQLDDIVEIRRLALTP 420

Query: 421  SKAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSS 480
            ++AYC PPEVELSNRVLR++K++ADRFLRVTFMDEG++ IN++  TYYVAPIV++ITS+S
Sbjct: 421  TRAYCLPPEVELSNRVLRKYKNIADRFLRVTFMDEGLQTINANTLTYYVAPIVRDITSTS 480

Query: 481  FPQKTKIFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMG 540
            F QKT+IF R+K IL  GF LCGR+YSFLA+SSNQLRD+SAWFF+E   ++V  I +WMG
Sbjct: 481  FSQKTRIFRRVKSILTDGFNLCGRRYSFLAFSSNQLRDRSAWFFAEDGKISVGQIRKWMG 540

Query: 541  RFTNKNVAKCAARIGQCFSSTYATIEVPRNMVDHQLPDVERNDYIFSDGIGTITPDLAQE 600
            RFTN+N+AKCAAR+GQCFSSTYAT+EVP + V+H LPD+ERN YIFSDGIGTITPDLA+E
Sbjct: 541  RFTNRNIAKCAARMGQCFSSTYATVEVPSSEVNHALPDIERNGYIFSDGIGTITPDLAKE 600

Query: 601  VADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWT 660
            VA+KLKL  + PCAYQIRYAGCKGVVA WP++GDGIRL+LRPSMNKFQS+H  LEICSWT
Sbjct: 601  VAEKLKLDINLPCAYQIRYAGCKGVVACWPAQGDGIRLSLRPSMNKFQSNHTTLEICSWT 660

Query: 661  RFQPGFLNRQIITLLSTLNVPDENFWSMQETMVSKLDRMITDTNVAFDVLTASCAEQGNA 720
            RFQPGFLNRQIITLLSTLNV DE FW MQ  MVSKL++M+TD +VAFDV+T SCAEQGN 
Sbjct: 661  RFQPGFLNRQIITLLSTLNVSDEVFWEMQTAMVSKLNKMLTDADVAFDVITKSCAEQGNT 720

Query: 721  AAIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQEGQ 780
            AAIMLSAGF+PQ EPHLRGML CIRAAQ WGLREKARIFVT GRW MGC DE  VL++GQ
Sbjct: 721  AAIMLSAGFKPQNEPHLRGMLTCIRAAQFWGLREKARIFVTSGRWLMGCLDELGVLEQGQ 780

Query: 781  CFIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELH 840
            CFIQVS P LE CFSKHGS F ETK NL VI+GTVVIAKNPCLHPGDVRILEAVDAP LH
Sbjct: 781  CFIQVSNPCLETCFSKHGSKFSETKKNLQVIKGTVVIAKNPCLHPGDVRILEAVDAPGLH 840

Query: 841  HLYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTLT 900
            HL+DCLVFPQ G+RPHTNEASGSDLDGDLYF+TWD+NLIPPS+KSW PM Y AAE K L 
Sbjct: 841  HLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDDNLIPPSKKSWTPMQYDAAEAKLLN 900

Query: 901  REVTRLDIMEFFAKNMINESLGTICNAHVVHADRSEYGALDENCIKLSELAATAVDFPKT 960
            R V+  DI++FFAKNM+NE+LG ICNAHVVHAD SE+GALDENCIKL+ELAATAVDFPKT
Sbjct: 901  RPVSHQDIIDFFAKNMVNENLGAICNAHVVHADLSEHGALDENCIKLAELAATAVDFPKT 960

Query: 961  GKIVTMPPHLKPKLYPDFMGKQATQSYKSTKILGRMYRRIRDVY-DEDMITACELNFTPG 1020
            GK+VTMPP+LKPK+YPDFMGK+  QSYKSTKILGR+YR+I D Y D+D     ELN   G
Sbjct: 961  GKLVTMPPYLKPKMYPDFMGKEEYQSYKSTKILGRLYRQIIDAYGDDDAAAFSELNCLSG 1020

Query: 1021 DVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLLGQYKVSREEEIVTGHIWSMPKYSSR 1080
            D+ YD DLEV G+AD+I EAW+QKCSYDGQL GLLGQYKV REEE+VTGHIWSMP  +SR
Sbjct: 1021 DIPYDADLEVLGSADYILEAWDQKCSYDGQLKGLLGQYKVKREEELVTGHIWSMPMSNSR 1080

Query: 1081 KQGELKEKLKHSYTTLKKEFRQVFENIGPEFEQLTDDERNALYERKASAWYQVTYHPTWL 1140
            KQG+LKE+LKHSY+ LKKEFRQVFE +  + EQLTDDE+N  YERKASAWYQV YHP W+
Sbjct: 1081 KQGDLKERLKHSYSALKKEFRQVFEGMNLDVEQLTDDEKNLQYERKASAWYQVAYHPKWI 1140

Query: 1141 KKSMELREPDIAEATPMLSFPWVAVDYLARIKIKCRKMKSVDPTKPINSLASYLSDRM 1197
            KKS+EL+E D      MLSF W+A DYLARIKIK R  + +D  KP+NSL  YL+DR+
Sbjct: 1141 KKSLELQESDAPGNATMLSFSWIAADYLARIKIKRRGTEGIDTAKPVNSLVKYLTDRI 1198

BLAST of CmaCh05G003840 vs. TrEMBL
Match: B9IKW9_POPTR (SILENCING DEFECTIVE 1 family protein OS=Populus trichocarpa GN=POPTR_0018s01670g PE=4 SV=1)

HSP 1 Score: 1825.8 bits (4728), Expect = 0.0e+00
Identity = 851/1194 (71.27%), Postives = 1020/1194 (85.43%), Query Frame = 1

Query: 6    SEKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDIVNVADV 65
            +++ VVTQVS+GGFD  V A+DL+ YL+  IGLV RCRLKTSWTPPESYP+F+I ++  +
Sbjct: 7    AKETVVTQVSVGGFDIHVTAKDLLEYLDRAIGLVWRCRLKTSWTPPESYPNFEITDITKI 66

Query: 66   IKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVNQRRRT 125
             +++DY++VVPHAFVHFALP SA  A++A+GR ELFLN++ LKVSLGP++P+ +NQRRRT
Sbjct: 67   ERTEDYRRVVPHAFVHFALPQSATLAMNASGRCELFLNNKALKVSLGPKNPFTLNQRRRT 126

Query: 126  KVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFSFKDNN 185
              PFKLS+V  +IGNL  +D F V WRGP SG+DFLVDPFDGTCKFCF+R+TAFS K  +
Sbjct: 127  TTPFKLSDVGFEIGNLVSRDEFFVGWRGPPSGVDFLVDPFDGTCKFCFSRNTAFSLKSTS 186

Query: 186  KHTVLKCDYKVEFLVRDINQIKRYTDISCYVILLQLTSSPCIWYRTADDDIAKSVPYDLL 245
            +H V+KCD+KVEFLVRDIN+I +YT+ SC V+LLQL S+P +WYRTADDDI   VP+DLL
Sbjct: 187  EHAVIKCDFKVEFLVRDINEIIQYTETSCLVLLLQLASAPWVWYRTADDDIEAWVPFDLL 246

Query: 246  DDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVH---QASLKRPP 305
            DDDDPWIRTTDFT SGAIGRC++YRVS+PPR+G KL  A+ YLKE+RV    + + +R  
Sbjct: 247  DDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGSKLRKAVKYLKERRVQVLQEENHRRRI 306

Query: 306  KILNEPDYGVQITDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRNQPN 365
            +IL+EPD+G+ ++D FFCIH+KE I+FE+LFLVNAVMHKGI NQHQ+++ FFDLLRNQ  
Sbjct: 307  RILDEPDFGMPMSDPFFCIHHKEGIAFEVLFLVNAVMHKGIFNQHQLSNDFFDLLRNQHT 366

Query: 366  EVSLAALSHIHTYRHPVPDACKRLKHVQEWLLKNPRLWKRSKELVDIIEIRRLVITPSKA 425
            EV+++AL HI TYR PV +A +RLK VQEWLLKNP L+K  K+L D++EIRRLVITP+KA
Sbjct: 367  EVNVSALKHICTYRRPVFNAYRRLKAVQEWLLKNPNLFKNPKQLGDVVEIRRLVITPTKA 426

Query: 426  YCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSFPQ 485
            YC PPEVELSNRVLR++KDVADRFLRVTFMDEG++++NS+V  YYVAPIV++ITS+SFPQ
Sbjct: 427  YCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQRMNSNVLNYYVAPIVRDITSNSFPQ 486

Query: 486  KTKIFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMGRFT 545
            KT+IF R++ IL  GFYLCGR+YSFLA+S+NQLRDQSAWFFSE ++++V  +  WMG+FT
Sbjct: 487  KTRIFKRVRSILTEGFYLCGRRYSFLAFSANQLRDQSAWFFSEERNISVLDVKSWMGKFT 546

Query: 546  NKNVAKCAARIGQCFSSTYATIEVPRNMVDHQLPDVERNDYIFSDGIGTITPDLAQEVAD 605
            N+N+AKCAAR+GQCFSSTYATIEVP   V+  LPD+ERN Y+FSDGIG ITPDLA+EVA+
Sbjct: 547  NRNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIERNGYVFSDGIGIITPDLAREVAE 606

Query: 606  KLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWTRFQ 665
            KLKL   PPCAYQIRYAGCKGVVA WP KGDG+RL+LRPSMNKFQS+H  LEICSWTRFQ
Sbjct: 607  KLKLDIDPPCAYQIRYAGCKGVVACWPGKGDGVRLSLRPSMNKFQSNHTTLEICSWTRFQ 666

Query: 666  PGFLNRQIITLLSTLNVPDENFWSMQETMVSKLDRMITDTNVAFDVLTASCAEQGNAAAI 725
            PGFLNRQIITLLSTLNVPD  FW MQETMVSKL++M  +++VAFDVLTASCA+QGN AAI
Sbjct: 667  PGFLNRQIITLLSTLNVPDAVFWKMQETMVSKLNQMFVNSDVAFDVLTASCADQGNVAAI 726

Query: 726  MLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQEGQCFI 785
            MLSAGF+P  EPHLRGML C+RAAQLW LREK RIFV  GRW MGC DE  +L++GQCFI
Sbjct: 727  MLSAGFKPDREPHLRGMLTCVRAAQLWDLREKTRIFVPSGRWLMGCLDELGMLEQGQCFI 786

Query: 786  QVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELHHLY 845
            QVS   LE+CF KHG+ F E + NL VI+GTVVIAKNPCLHPGDVR+LEAVD P LHHLY
Sbjct: 787  QVSNSSLEKCFMKHGAKFSEAEKNLQVIKGTVVIAKNPCLHPGDVRVLEAVDVPGLHHLY 846

Query: 846  DCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTLTREV 905
            DCLVFPQ GERPHTNEASGSDLDGDLYF+TWDENLIPPS++SW PM Y AAE K L R V
Sbjct: 847  DCLVFPQKGERPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKLLARPV 906

Query: 906  TRLDIMEFFAKNMINESLGTICNAHVVHADRSEYGALDENCIKLSELAATAVDFPKTGKI 965
               DI+EFFAKNM+N++LG ICNAHVVHAD SEYGA D+NC+ L+ELAATAVDFPKTGK+
Sbjct: 907  NHQDIIEFFAKNMVNDNLGAICNAHVVHADLSEYGATDKNCLTLAELAATAVDFPKTGKV 966

Query: 966  VTMPPHLKPKLYPDFMGKQATQSYKSTKILGRMYRRIRDVYDEDMITACELNFTPGDVYY 1025
            V+MPP+LKPK+YPDFMGK+  QSYKS KILGR+YR+I+D YDED+  + ELN  PGD+ Y
Sbjct: 967  VSMPPYLKPKMYPDFMGKEEYQSYKSEKILGRLYRQIKDAYDEDVAASSELNLVPGDIPY 1026

Query: 1026 DVDLEVAGAADFIAEAWNQKCSYDGQLSGLLGQYKVSREEEIVTGHIWSMPKYSSRKQGE 1085
            D DLEV GA+D+I++AW+QKCSYDGQL+GLL QYKV REEE+VTGHIWSMPKYSSRKQGE
Sbjct: 1027 DSDLEVVGASDYISDAWDQKCSYDGQLNGLLSQYKVKREEEVVTGHIWSMPKYSSRKQGE 1086

Query: 1086 LKEKLKHSYTTLKKEFRQVFENIGPEFEQLTDDERNALYERKASAWYQVTYHPTWLKKSM 1145
            LK++LKHSY +LKKEFRQ+FE +  EFEQL D E+N LYE+KASAWYQV YHP W+KKS+
Sbjct: 1087 LKDRLKHSYNSLKKEFRQIFEKMDLEFEQLEDGEKNKLYEQKASAWYQVVYHPHWVKKSL 1146

Query: 1146 ELREPDIAEATPMLSFPWVAVDYLARIKIKCRKMKSVDPTKPINSLASYLSDRM 1197
            EL++PD A  + MLSF W+A DYLARIKI+ R+  +VD  KP+NSLA YL+DRM
Sbjct: 1147 ELQDPDGAGTSVMLSFAWIAADYLARIKIRHRETGNVDSAKPVNSLAKYLADRM 1200

BLAST of CmaCh05G003840 vs. TrEMBL
Match: A0A067L2C2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03988 PE=4 SV=1)

HSP 1 Score: 1820.1 bits (4713), Expect = 0.0e+00
Identity = 866/1198 (72.29%), Postives = 1015/1198 (84.72%), Query Frame = 1

Query: 1    MGSEESEK-IVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDI 60
            MG+E SEK  VVTQVS GGF++ V A+DL++YLE  IG V RCRLKTSWTPPESYP+F I
Sbjct: 1    MGTERSEKDTVVTQVSFGGFENHVNAKDLVAYLEEVIGQVWRCRLKTSWTPPESYPNFKI 60

Query: 61   VNVADVIKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHV 120
             + A + ++++YK+V PHAFVHFAL +SA  A +AAGR ELFLNDR LKVSLGPE+P+ +
Sbjct: 61   TDTAGIHRTNEYKRVEPHAFVHFALAESATWAKNAAGRCELFLNDRPLKVSLGPENPFTL 120

Query: 121  NQRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAF 180
            NQRRR  +P KLS+V ++IG +  +D F V WRGP SG+DFLVDPFDGTCKFCFTRDTAF
Sbjct: 121  NQRRRKTIPSKLSDVCIEIGMMVSRDEFLVGWRGPPSGVDFLVDPFDGTCKFCFTRDTAF 180

Query: 181  SFKDNNKHTVLKCDYKVEFLVRDINQIKRYTDISCYVILLQLTSSPCIWYRTADDDIAKS 240
            S KD NKH V++CD+K+EFLVRDIN+IK+Y D S  VILLQL S+P +WYRTADDDI   
Sbjct: 181  SIKDTNKHAVIRCDFKLEFLVRDINEIKQYKDTSYLVILLQLASAPWVWYRTADDDIEVL 240

Query: 241  VPYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLK 300
            VP++LLDDDDPWIRTTDFT SGAIGRCN+YRVS+PPR+G KL  A+NYLKE+RV   SL+
Sbjct: 241  VPFNLLDDDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGAKLERAINYLKERRVQVDSLR 300

Query: 301  RPPKILNEPDYGVQITDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRN 360
            RP KILNEPDYG+ ++D FFCIH KE I+FE++FLVNAVMHKGI NQHQ++D FFDLLRN
Sbjct: 301  RPLKILNEPDYGMPMSDPFFCIHRKEGIAFEIVFLVNAVMHKGIFNQHQLSDDFFDLLRN 360

Query: 361  QPNEVSLAALSHIHTYRHPVPDACKRLKHVQEWLLKNPRLWKRSKELVDIIEIRRLVITP 420
            QP ++++AAL HI +Y+ PV DA +RLK VQEWLLKNP+L+K  K+L DI++IRRL ITP
Sbjct: 361  QPADINVAALKHICSYKRPVFDAHRRLKAVQEWLLKNPKLFKCPKQLDDIVQIRRLAITP 420

Query: 421  SKAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSS 480
            ++AYC PPE+ELSNRVLR++K+ ADRFLRVTFMDEG++ IN++  TYYVAPIV++ITS+S
Sbjct: 421  TRAYCLPPEIELSNRVLRKYKNFADRFLRVTFMDEGLQTINANTLTYYVAPIVRDITSTS 480

Query: 481  FPQKTKIFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMG 540
            F QKT+IF R+K IL  GFYLCGR+YSFLA+SSNQLRD+SAWFF+E   + VD I +WMG
Sbjct: 481  FSQKTRIFKRVKSILTDGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDGKIRVDQIRKWMG 540

Query: 541  RFTNKNVAKCAARIGQCFSSTYATIEVPRNMVDHQLPDVERNDYIFSDGIGTITPDLAQE 600
            +FTNKN+AKCAAR+GQCFSSTYAT+EVP   V+   PD+ERN Y FSDGIG ITPDLA+ 
Sbjct: 541  KFTNKNIAKCAARMGQCFSSTYATVEVPSAEVNLAHPDIERNGYTFSDGIGMITPDLAKA 600

Query: 601  VADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWT 660
            VA+KLKL  +PPCAYQIRYAGCKGVVA WP++GDGIRL+LRPSMNKFQS+H  LEICSWT
Sbjct: 601  VAEKLKLDINPPCAYQIRYAGCKGVVACWPAQGDGIRLSLRPSMNKFQSNHTTLEICSWT 660

Query: 661  RFQPGFLNRQIITLLSTLNVPDENFWSMQETMVSKLDRMITDTNVAFDVLTASCAEQGNA 720
            RFQPGFLNRQIITLLSTLNV DE FW MQ  MVSKL++M+TD +VAFDV+TASC EQGN 
Sbjct: 661  RFQPGFLNRQIITLLSTLNVSDEIFWKMQIAMVSKLNKMLTDADVAFDVITASCTEQGNT 720

Query: 721  AAIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQEGQ 780
            AA+MLSAGF+PQ EPHLRGML CIRAAQ   LREKARIFV+ GRW MGC DE  VL++GQ
Sbjct: 721  AALMLSAGFKPQNEPHLRGMLTCIRAAQFCDLREKARIFVSSGRWLMGCLDELGVLEQGQ 780

Query: 781  CFIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELH 840
            CFIQVS P LE CFSKHGS F ETK NL VI GTVVIAKNPCLHPGDVRILEAVDAP L 
Sbjct: 781  CFIQVSNPSLETCFSKHGSRFSETKKNLQVITGTVVIAKNPCLHPGDVRILEAVDAPGLC 840

Query: 841  HLYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTLT 900
            HL+DCLVFPQ G+RPHTNEASGSDLDGDLYF+TWDENLIPPS++SW PM Y AAE K L+
Sbjct: 841  HLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKQSWTPMQYDAAEPKLLS 900

Query: 901  REVTRLDIMEFFAKNMINESLGTICNAHVVHADRSEYGALDENCIKLSELAATAVDFPKT 960
            R V+  DI++FFAKNM+NESLG ICNAHVV AD SEYGALDENCIKL+ELAATAVDFPKT
Sbjct: 901  RPVSHQDIIDFFAKNMVNESLGAICNAHVVRADLSEYGALDENCIKLAELAATAVDFPKT 960

Query: 961  GKIVTMPPHLKPKLYPDFMGKQATQSYKSTKILGRMYRRIRDVY-DEDMITACELNFTPG 1020
            GK+VT+P +LKPK+YPDFMGK+  QSYKSTKILGR+YR I+D Y D+D   + ELN + G
Sbjct: 961  GKLVTLPQYLKPKMYPDFMGKEEYQSYKSTKILGRLYRDIKDAYGDDDAAASSELNCSSG 1020

Query: 1021 DVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLLGQYKVSREEEIVTGHIWSMPKYSSR 1080
            D+ YD +LEV G+AD+I EAW+QKCSYDGQL GLLGQYKV +EEE+VTGHIWSMP Y+SR
Sbjct: 1021 DIPYDTNLEVLGSADYILEAWDQKCSYDGQLKGLLGQYKVKKEEELVTGHIWSMPMYNSR 1080

Query: 1081 KQGELKEKLKHSYTTLKKEFRQVFENIGPEFEQLTDDERNALYERKASAWYQVTYHPTWL 1140
            K GELKE+LKHSY+ LKKEFRQVFE +  +FEQLTDDE+N LYERKASAWYQVTYHP W+
Sbjct: 1081 KLGELKERLKHSYSALKKEFRQVFEKMDLDFEQLTDDEKNLLYERKASAWYQVTYHPKWI 1140

Query: 1141 KKSMELREPDIAEATPMLSFPWVAVDYLARIKIKCRKMKSVDPTKPINSLASYLSDRM 1197
            KKS+EL+EPD A    +LSF W+A DYLARIKIK R  + VD  KP+NSL  YL+DR+
Sbjct: 1141 KKSLELQEPDAAGNATILSFAWIAADYLARIKIKHRGTEGVDTAKPVNSLVKYLADRI 1198

BLAST of CmaCh05G003840 vs. TrEMBL
Match: B9RP51_RICCO (RNA-dependent RNA polymerase, putative OS=Ricinus communis GN=RCOM_0924060 PE=4 SV=1)

HSP 1 Score: 1811.2 bits (4690), Expect = 0.0e+00
Identity = 851/1196 (71.15%), Postives = 1002/1196 (83.78%), Query Frame = 1

Query: 7    EKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDIVNVADVI 66
            ++ VVTQVS GGFD DV A+DL++YL++EIG V RCRLKTSWTPPESYP+F+I + A + 
Sbjct: 8    KETVVTQVSFGGFDKDVTARDLVAYLDNEIGQVWRCRLKTSWTPPESYPNFEITDTAVIQ 67

Query: 67   KSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVNQRRRTK 126
            + D Y++V PHAFVHFA PDSA  A +AAG  ELF N R +KVSLGPE+P+H+NQRRRT 
Sbjct: 68   RVDAYRRVEPHAFVHFASPDSATWAKNAAGHCELFFNGRPVKVSLGPENPFHLNQRRRTT 127

Query: 127  VPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFSFKDNNK 186
            +PFKLS+V V+IG L  +D F V WRGP SG+DFLVDPFDG CKFCFTRDTAFSFK   +
Sbjct: 128  IPFKLSDVHVEIGTLVSRDEFLVGWRGPPSGVDFLVDPFDGKCKFCFTRDTAFSFKGTTE 187

Query: 187  HTVLKCDYKVEFLVRDINQIKRYTDISCYVILLQLTSSPCIWYRTADDDIAKSVPYDLLD 246
            H V++CD+K+EFLVRDIN+IK+YTD SC VILLQL S+P +WYRTADDDI   VP+DLLD
Sbjct: 188  HAVIRCDFKLEFLVRDINEIKQYTDTSCLVILLQLASAPSVWYRTADDDIEVLVPFDLLD 247

Query: 247  DDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLKRPPKILN 306
            DDDPWIRTTDFT SGAIGRCN+YRVS+PPR+G KL  A+N+L+E+RV +  L+RP  +  
Sbjct: 248  DDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGAKLKRALNFLRERRVQEDCLRRPLHVTA 307

Query: 307  EPDYGVQITDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRNQPNEVSL 366
            EP+Y + ++D FFCIH++E + F L+FLVNAVMHKGI NQHQ++D FFDLLRNQP +V++
Sbjct: 308  EPEYEMPMSDPFFCIHHEEGVDFNLMFLVNAVMHKGIFNQHQLSDSFFDLLRNQPLDVNI 367

Query: 367  AALSHIHTYRHPVPDACKRLKHVQEWLLKNPRLWKRSKELVDIIEIRRLVITPSKAYCFP 426
            AAL HI +Y+HPV DA KRLK VQ+WLLKNP+L++ SK+L DI+EIRRL ITP++AYC P
Sbjct: 368  AALRHICSYKHPVFDAHKRLKAVQQWLLKNPKLFRSSKQLDDIVEIRRLAITPTRAYCLP 427

Query: 427  PEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSFPQKTKI 486
            PEVELSNRVLRR+KD+AD+FLRVTFMDEG++ +N++  TYY APIV++ITS+SF QKT+I
Sbjct: 428  PEVELSNRVLRRYKDIADQFLRVTFMDEGLQTMNANTLTYYCAPIVRDITSNSFSQKTRI 487

Query: 487  FGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMGRFTNKNV 546
            F R+K IL  GFYLCGRKYSFLA+SSNQLRD+SAWFF+E    +V  I  WMG+FTN+N+
Sbjct: 488  FKRVKSILTDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDGKTSVSKIRNWMGKFTNRNI 547

Query: 547  AKCAARIGQCFSSTYATIEVPRNMVDHQLPDVERNDYIFSDGIGTITPDLAQEVADKLKL 606
            AKCAAR+GQCFSSTYAT+EVP       LPD+ERN+YIFSDGIG ITPDLA+EVA+KLKL
Sbjct: 548  AKCAARMGQCFSSTYATVEVPSAEAILDLPDIERNNYIFSDGIGMITPDLAKEVAEKLKL 607

Query: 607  GGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWTRFQPGFL 666
              +PPCAYQIRYAGCKGVVA WP+  DGIRL+LR SMNKF S+H  LEICSWTRFQPGFL
Sbjct: 608  EVNPPCAYQIRYAGCKGVVACWPAHIDGIRLSLRVSMNKFHSNHTTLEICSWTRFQPGFL 667

Query: 667  NRQIITLLSTLNVPDENFWSMQETMVSKLDRMITDTNVAFDVLTASCAEQGNAAAIMLSA 726
            NRQIITLLSTL+VPDE FW MQ  MVSKL++M  D +VAFDV+TASCAEQGN AAIMLSA
Sbjct: 668  NRQIITLLSTLDVPDEIFWKMQIVMVSKLNQMFMDADVAFDVVTASCAEQGNTAAIMLSA 727

Query: 727  GFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQEGQCFIQVST 786
            GF P+TEPHL GML CIRAAQLWGLREK RIFV  GRW MGC DE  VL+ GQCFIQVS 
Sbjct: 728  GFNPKTEPHLCGMLTCIRAAQLWGLREKTRIFVPSGRWLMGCLDELGVLEHGQCFIQVSN 787

Query: 787  PLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELHHLYDCLV 846
            P LE CF KHGS F E+K  L V++GTVV+AKNPCLHPGD+RILEAVDAPELHHL+DCLV
Sbjct: 788  PSLESCFWKHGSRFSESKKKLQVVKGTVVVAKNPCLHPGDIRILEAVDAPELHHLHDCLV 847

Query: 847  FPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTLTREVTRLD 906
            FPQ G+RPHTNEASGSDLDGDLYF+TWDENLIPPS++SW PM Y AAE K L R V   D
Sbjct: 848  FPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWLPMQYDAAEAKQLNRPVNHQD 907

Query: 907  IMEFFAKNMINESLGTICNAHVVHADRSEYGALDENCIKLSELAATAVDFPKTGKIVTMP 966
            I++FFAKNM+NE+LG ICNAHVVHAD SEYGALDENCIKL+ELAATAVDFPKTGK+VTMP
Sbjct: 908  IIDFFAKNMVNENLGAICNAHVVHADLSEYGALDENCIKLAELAATAVDFPKTGKLVTMP 967

Query: 967  PHLKPKLYPDFMGKQATQSYKSTKILGRMYRRIRDVY------DEDMITACELNFTPGDV 1026
            PHLKPKLYPDFMGK+  QSY S KILGR+YR+++D Y      D+D  T+ ELN   GD+
Sbjct: 968  PHLKPKLYPDFMGKEDYQSYNSNKILGRLYRQVKDDYNDDDDDDDDAATSSELNLVRGDI 1027

Query: 1027 YYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLLGQYKVSREEEIVTGHIWSMPKYSSRKQ 1086
             YD DLEV+G++D+I +AW+QKCSYDGQL GLL QYKV REEE+VTGHIWSMPK +SRKQ
Sbjct: 1028 PYDKDLEVSGSSDYILDAWDQKCSYDGQLKGLLAQYKVKREEEVVTGHIWSMPKCNSRKQ 1087

Query: 1087 GELKEKLKHSYTTLKKEFRQVFENIGPEFEQLTDDERNALYERKASAWYQVTYHPTWLKK 1146
            GELKE+LK SY +LKKEFRQVFE +  +FEQLT+DE+N LYE+KASAWYQV YHP W+ K
Sbjct: 1088 GELKERLKQSYHSLKKEFRQVFEKMDSDFEQLTEDEKNLLYEQKASAWYQVAYHPKWVNK 1147

Query: 1147 SMELREPDIAEATPMLSFPWVAVDYLARIKIKCRKMKSVDPTKPINSLASYLSDRM 1197
            SMEL+EPD A    MLSF W+A DYLARIKI+CR    VD +KP+NSL  YL+DR+
Sbjct: 1148 SMELQEPDAAGCASMLSFAWIAADYLARIKIRCRGFDGVDTSKPVNSLVKYLADRI 1203

BLAST of CmaCh05G003840 vs. TAIR10
Match: AT3G49500.1 (AT3G49500.1 RNA-dependent RNA polymerase 6)

HSP 1 Score: 1681.4 bits (4353), Expect = 0.0e+00
Identity = 796/1198 (66.44%), Postives = 970/1198 (80.97%), Query Frame = 1

Query: 1    MGSEES-EKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDI 60
            MGSE + +K VVTQVSIGGF     A+ L  YLE E+G+V RCRLKTSWTPP SYP+F+I
Sbjct: 1    MGSEGNMKKSVVTQVSIGGFGESTTAKQLTDYLEDEVGIVWRCRLKTSWTPPGSYPNFEI 60

Query: 61   VNVADVIKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHV 120
             + +++   D+YKKV PHAFVHFA+ +SA  A+ AAG+  L L+ + LKVSLGP++PY +
Sbjct: 61   ADTSNIPSIDEYKKVEPHAFVHFAVFESAGRAMDAAGQCNLILDGQPLKVSLGPKNPYSL 120

Query: 121  NQRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAF 180
            NQRRRT VP+KL+ + ++IG L  +D F V+WR  + G+DFLVDPFD TCKFCF + TAF
Sbjct: 121  NQRRRTTVPYKLAGITLEIGTLVSRDDFFVSWR--AEGVDFLVDPFDNTCKFCFRKSTAF 180

Query: 181  SFKDNNKHTVLKCDYKVEFLVRDINQIKRYTDISCYVILLQLTSSPCIWYRTADDDIAKS 240
            SFKD   H V+ CDYK+E LVRDI  +++Y  +  +V++LQL SSP +WYRTADDDI  +
Sbjct: 181  SFKDAVMHAVINCDYKLELLVRDIQTVRQYKTLHGFVLILQLASSPRVWYRTADDDIYDT 240

Query: 241  VPYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLK 300
            VP DLLDDDDPWIRTTDFT  GAIGRC++YRV + PRY  KL  A++Y + +RV +  ++
Sbjct: 241  VPGDLLDDDDPWIRTTDFTQVGAIGRCHSYRVLISPRYENKLRTALDYFRMRRVQEERVR 300

Query: 301  RPPKILNEPDYGVQITDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRN 360
             PP+I NEP +G  ++DHFFCIH+KE ISFE++FLVN+V+H+G+ NQ Q+T+RFFDLLRN
Sbjct: 301  WPPRIRNEPCFGEPVSDHFFCIHHKEGISFEIMFLVNSVLHRGVFNQFQLTERFFDLLRN 360

Query: 361  QPNEVSLAALSHIHTYRHPVPDACKRLKHVQEWLLKNPRLWKRSKELVDIIEIRRLVITP 420
            QP +V++A+L H+ TY+ PV DA KRLK VQEW+ KNP+L    ++  DI EIRRLVITP
Sbjct: 361  QPKDVNIASLKHLCTYKRPVFDAYKRLKLVQEWIQKNPKLLGSHEQSEDISEIRRLVITP 420

Query: 421  SKAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSS 480
            ++AYC PPEVELSNRVLRR+K VA+RFLRVTFMDE M+ INS+V +Y+VAPIVK++TSSS
Sbjct: 421  TRAYCLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVAPIVKDLTSSS 480

Query: 481  FPQKTKIFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMG 540
            F QKT +F R+K IL  GF LCGRKYSFLA+S+NQLRD+SAWFF+E     V  I  WMG
Sbjct: 481  FSQKTYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKTRVSDIKTWMG 540

Query: 541  RFTNKNVAKCAARIGQCFSSTYATIEVPRNMVDHQLPDVERNDYIFSDGIGTITPDLAQE 600
            +F +KNVAKCAAR+G CFSSTYAT++V  + VD ++PD+ERN Y+FSDGIGTITPDLA E
Sbjct: 541  KFKDKNVAKCAARMGLCFSSTYATVDVMPHEVDTEVPDIERNGYVFSDGIGTITPDLADE 600

Query: 601  VADKLKLGGS-PPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSW 660
            V +KLKL     PCAYQIRYAG KGVVA WPSK DGIRLALR SM KF S H ILEICSW
Sbjct: 601  VMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSMKKFFSKHTILEICSW 660

Query: 661  TRFQPGFLNRQIITLLSTLNVPDENFWSMQETMVSKLDRMITDTNVAFDVLTASCAEQGN 720
            TRFQPGFLNRQIITLLS L VPDE FW MQE+M+ KL+R++ DT+VAF+VLTASCAEQGN
Sbjct: 661  TRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAFEVLTASCAEQGN 720

Query: 721  AAAIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQEG 780
             AAIMLSAGF+P+TEPHLRGML  +R AQLWGLREK+RIFVT GRW MGC DE+ +L+ G
Sbjct: 721  TAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWLMGCLDEAGILEHG 780

Query: 781  QCFIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPEL 840
            QCFIQVS P +E CFSKHGS F ETK +L V++G V IAKNPCLHPGDVRILEAVD P+L
Sbjct: 781  QCFIQVSKPSIENCFSKHGSRFKETKTDLEVVKGYVAIAKNPCLHPGDVRILEAVDVPQL 840

Query: 841  HHLYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTL 900
            HH+YDCL+FPQ G+RPHTNEASGSDLDGDLYF+ WD+ LIPP+RKS+P M+Y AAE K+L
Sbjct: 841  HHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPNRKSYPAMHYDAAEEKSL 900

Query: 901  TREVTRLDIMEFFAKNMINESLGTICNAHVVHADRSEYGALDENCIKLSELAATAVDFPK 960
             R V   DI++FFA+N+ NE LGTICNAHVVHADRSEYGA+DE C+ L+ELAATAVDFPK
Sbjct: 901  GRAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECLLLAELAATAVDFPK 960

Query: 961  TGKIVTMPPHLKPKLYPDFMGKQATQSYKSTKILGRMYRRIRDVYDEDMITACELNFTPG 1020
            TGKIV+MP HLKPKLYPDFMGK+  Q+YKS KILGR+YRR+++VYDED   + E +  P 
Sbjct: 961  TGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRRVKEVYDEDAEASSEESTDPS 1020

Query: 1021 DVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLLGQYKVSREEEIVTGHIWSMPKYSSR 1080
             + YD  LE+ G  D I EAW  KC YDGQL GLLGQYKV +EEEIVTGHIWSMPKY+S+
Sbjct: 1021 AIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYTSK 1080

Query: 1081 KQGELKEKLKHSYTTLKKEFRQVFENIGPEFEQLTDDERNALYERKASAWYQVTYHPTWL 1140
            KQGELKE+LKHSY +LKKEFR+VFE   P+ E L+++E+N LYE+KASAWY VTYHP W+
Sbjct: 1081 KQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKASAWYHVTYHPEWV 1140

Query: 1141 KKSMELREPDIAEATPMLSFPWVAVDYLARIKIKCRKMKSVDPTKPINSLASYLSDRM 1197
            KKS+EL++PD +    MLSF W+A DYLARIKI+ R+M S+D  KP++SLA +L+ R+
Sbjct: 1141 KKSLELQDPDESSHAAMLSFAWIAADYLARIKIRSREMGSIDSAKPVDSLAKFLAQRL 1196

BLAST of CmaCh05G003840 vs. TAIR10
Match: AT1G14790.1 (AT1G14790.1 RNA-dependent RNA polymerase 1)

HSP 1 Score: 574.3 bits (1479), Expect = 1.7e-163
Identity = 351/999 (35.14%), Postives = 545/999 (54.55%), Query Frame = 1

Query: 193  DYKVEFLVRDINQIKRYTDI--SCYVILLQLTSSPCIWYRTADDDIAKSVPYDLLD---- 252
            DY++E    +I QI  ++    S   +++Q+  +P I+ +   +D   ++ + ++D    
Sbjct: 143  DYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAPKIFEK---EDQPINLLFGIMDFYSD 202

Query: 253  -DDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIK--LNNAMNYLKEQRVHQASLKRPPK 312
              D+ WIRTTDFT S  IG+   + + +P    +     N  NY  E R     ++    
Sbjct: 203  GSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNVPDFRENFANYA-EHRASSFLIESGSS 262

Query: 313  ILNEPDYGVQITDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRNQPNE 372
              +  +  V + D          + FE+LF +N ++    ++   +   F+ LL  +  +
Sbjct: 263  YSSNANTLVPVVDP----PPGFSLPFEILFKLNTLVQNACLSGPALDLDFYRLLNQKKYD 322

Query: 373  VSLAALSHIHTYRHPVPDACKRLKH-----VQEWLLKNPRLWKRSKELVD-IIEIRRLVI 432
             +L  + H       + + C    H      ++W+ K       +  L D ++ + R+ +
Sbjct: 323  RAL--IDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGKLPLSPTISLDDGLVYMYRVQV 382

Query: 433  TPSKAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITS 492
            TP++ Y   PEV +SNRVLR +    + FLRV+F+DE ++K+ S   +            
Sbjct: 383  TPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVRSMDLS----------PR 442

Query: 493  SSFPQKTKIFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRW 552
            SS  ++TK++ R+  +L+ G  +  +K+ FLA+SS+QLR+ SAW F+    +T   I  W
Sbjct: 443  SSTQRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDRITAAHIRAW 502

Query: 553  MGRFTN-KNVAKCAARIGQCFSSTYATIEVPRNMVDHQLPDVE----RNDYIFSDGIGTI 612
            MG F + +NVAK AAR+GQ FSS+  T+ V  + ++  +PDVE       Y+FSDGIG I
Sbjct: 503  MGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIE-VIPDVEIISLGTRYVFSDGIGKI 562

Query: 613  TPDLAQEVADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRI 672
            + + A++VA K  L    P A+QIRY G KGVVA  P+     +L+LR SM+KF+S++  
Sbjct: 563  SAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSK--KLSLRKSMSKFESENTK 622

Query: 673  LEICSWTRFQPGFLNRQIITLLSTLNVPDENFWSMQETMVSKLDRMITDTNVAFDVLTAS 732
            L++ +W+++QP ++NRQ+ITLLSTL V D  F   Q  +V +LD ++T    A + L   
Sbjct: 623  LDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPLEAHEALGLM 682

Query: 733  C-AEQGNAAAIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDE 792
               E  N    ++  G++P  EP L  ML   RA++L  LR K RIF++ GR  MGC DE
Sbjct: 683  APGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGGRSMMGCLDE 742

Query: 793  SAVLQEGQCFIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILE 852
            +  L+ GQ  +Q S P+      + G  F        +I G VV+AKNPCLHPGDVR+L+
Sbjct: 743  TRTLEYGQVVVQYSDPM------RPGRRF--------IITGPVVVAKNPCLHPGDVRVLQ 802

Query: 853  AVDAPELHHLYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYV 912
            AV+ P L+H+ DC+VFPQ G RPH NE SGSDLDGD+YF+ WD+ L+PP  ++  PM+Y 
Sbjct: 803  AVNVPALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPP--RTSEPMDYT 862

Query: 913  AAEVKTLTREVTRLDIMEFFAKNMINESLGTICNAHVVHADRSEYGALDENCIKLSELAA 972
                + L  +VT  ++ E+FA  ++N+SLG I NAH   AD+    A  + CI+L++  +
Sbjct: 863  PEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELAKKFS 922

Query: 973  TAVDFPKTGKIVTMPPHLKPKLYPDFMGKQATQSYKSTKILGRMYRRIRDVYDEDMITAC 1032
            TAVDFPKTG    +P HL  K YPDFM K    +Y+S  ++G+++R +++     +I+  
Sbjct: 923  TAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKE-RAPPLISIK 982

Query: 1033 ELNFTPGDVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLLGQYKVSREEEIVTGHIWS 1092
                      YD D+EV G  +++ EA+ QK +YD +L  L+  Y +  E EI++G I  
Sbjct: 983  SFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGGIMR 1042

Query: 1093 MPKYSSRKQGELKEKLKHSYTTLKKEFRQVFENIGPEFEQLTDDERNALYERKASAWYQV 1152
            M K  ++++    E +  +   L+KE   +F          +++E N     KASAWY V
Sbjct: 1043 MSKSFTKRRD--AESIGRAVRALRKETLSLF--------NASEEEENE--SAKASAWYHV 1084

Query: 1153 TYHPTWLKKSMELREPDIAEATPMLSFPWVAVDYLARIK 1171
            TYH ++     E    D       LSF W   D L RIK
Sbjct: 1103 TYHSSYWGLYNEGLNRD-----HFLSFAWCVYDKLVRIK 1084

BLAST of CmaCh05G003840 vs. TAIR10
Match: AT4G11130.1 (AT4G11130.1 RNA-dependent RNA polymerase 2)

HSP 1 Score: 513.5 bits (1321), Expect = 3.6e-145
Identity = 335/969 (34.57%), Postives = 508/969 (52.43%), Query Frame = 1

Query: 246  DDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYG-IKLNNAMNYLKEQRVHQ--------A 305
            D D  WIRTTDF+ S +IG    + + V      + + + + Y +E  +          A
Sbjct: 214  DFDFMWIRTTDFSGSKSIGTSTCFCLEVHNGSTMLDIFSGLPYYREDTLSLTYVDGKTFA 273

Query: 306  SLKRPPKILNEPDYGVQITDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTD-RFFD 365
            S  +   +LN    G++               +E+LF +NA++H   I+    +D     
Sbjct: 274  SAAQIVPLLNAAILGLEFP-------------YEILFQLNALVHAQKISLFAASDMELIK 333

Query: 366  LLRNQPNEVSLAALSHIHTYRHPVPDACKRLKHVQEWLLKNPR-----LWKRSKELVDII 425
            +LR    E +L  L  +H       D    +K   + ++K  +      +KR  E  +I+
Sbjct: 334  ILRGMSLETALVILKKLHQQSSICYDPVFFVKTQMQSVVKKMKHSPASAYKRLTEQ-NIM 393

Query: 426  EIRRLVITPSKAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYT----- 485
              +R  +TPSK Y   PE+E +N V++ F +    F+RVTF++E   K+ ++  +     
Sbjct: 394  SCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDFMRVTFVEEDWSKLPANALSVNSKE 453

Query: 486  -YYVAPIVKEITSSSFPQKTKIFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFS 545
             Y+V P            +T I+ R+  IL  G  +  +++ FLA+S++QLR  S W F+
Sbjct: 454  GYFVKP-----------SRTNIYNRVLSILGEGITVGPKRFEFLAFSASQLRGNSVWMFA 513

Query: 546  ECKDVTVDSILRWMGRFTN-KNVAKCAARIGQCFSSTYATIEVPRNMVDHQLPDVERN-- 605
              + V  + I  WMG F   ++++KCAAR+GQ FS++  T+ V    V+ Q+PD+E    
Sbjct: 514  SNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQDVE-QIPDIEVTTD 573

Query: 606  --DYIFSDGIGTITPDLAQEVADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLAL 665
              DY FSDGIG I+   A++VA K  L    P A+QIRY G KGV+A    +    +L+L
Sbjct: 574  GADYCFSDGIGKISLAFAKQVAQKCGLS-HVPSAFQIRYGGYKGVIAV--DRSSFRKLSL 633

Query: 666  RPSMNKFQSDHRILEICSWTRFQPGFLNRQIITLLSTLNVPDENFWSMQETMVSKLDRMI 725
            R SM KF S++R+L +  WT   P FLNR+II LLSTL + D  F +MQ   +S L  M+
Sbjct: 634  RDSMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQAVHLSMLGNML 693

Query: 726  TDTNVAFDVLTASCAEQG-NAAAIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIF 785
             D + A +VL     E   N    ML  G+ P +EP+L  ML     +QL  L+ + RI 
Sbjct: 694  EDRDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQLSELKSRCRIL 753

Query: 786  VTDGRWCMGCFDESAVLQEGQCFIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAK 845
            V  GR  +GC DE  +L+ GQ +++V+    E   S+  S F +     +V+ G VV+ K
Sbjct: 754  VPKGRILIGCMDEMGILEYGQVYVRVTLTKAE-LKSRDQSYFRKIDEETSVVIGKVVVTK 813

Query: 846  NPCLHPGDVRILEAVDAPELHH----LYDCLVFPQNGERPHTNEASGSDLDGDLYFITWD 905
            NPCLHPGD+R+L+A+   E+H       DC++FPQ GERPH NE SG DLDGD +F++WD
Sbjct: 814  NPCLHPGDIRVLDAIY--EVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGDQFFVSWD 873

Query: 906  ENLIPPSRKSWPPMNYVAAEVKTLTREVTRLDIMEFFAKNMINESLGTICNAHVVHADRS 965
            E +IP      PPM+Y  +  + +  +VT  +I +FF   MI+++LG I  AH+VHADR 
Sbjct: 874  EKIIPSEMD--PPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHLVHADRD 933

Query: 966  EYGALDENCIKLSELAATAVDFPKTGKIVTMPPHLKPKLYPDFMGKQATQSYKSTKILGR 1025
               A  + C++L+ L + AVDF KTG    MP  LKP+ +PDF+ +    +Y S  + G+
Sbjct: 934  PEKARSQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISESVFGK 993

Query: 1026 MYRRIRDVYDEDMITACELNFTPGDVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLLG 1085
            +YR ++    +    A     +   V YDV LE AG   FI  A   +  Y  +L+ L+ 
Sbjct: 994  LYRAVKSSLAQRKPEA----ESEDTVAYDVTLEEAGFESFIETAKAHRDMYGEKLTSLMI 1053

Query: 1086 QYKVSREEEIVTGHIWSMPKY---SSRKQGELKEKLKHSYTTLKKEFRQVFENIGPEFEQ 1145
             Y  + EEEI+TG + +   Y    +R+ G++K+++  S   L KE           FE+
Sbjct: 1054 YYGAANEEEILTGILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAM-------GWFEK 1113

Query: 1146 LTDDERNALYERKASAWYQVTYHPTWLKKSMELREPDIAEATPMLSFPWVAVDYLARIKI 1181
              +DE+    ++ ASAWY VTY+P               E    LSFPW+  D L  IK 
Sbjct: 1114 SCEDEQQK--KKLASAWYYVTYNPNHRD-----------EKLTFLSFPWIVGDVLLDIKA 1124

BLAST of CmaCh05G003840 vs. TAIR10
Match: AT2G05370.1 (AT2G05370.1 BEST Arabidopsis thaliana protein match is: RNA-dependent RNA polymerase 6 (TAIR:AT3G49500.1))

HSP 1 Score: 116.7 bits (291), Expect = 9.9e-26
Identity = 61/136 (44.85%), Postives = 91/136 (66.91%), Query Frame = 1

Query: 7   EKIVVTQVSIGGFDSDVKAQDLMSYLESEIGL-VDRCRLKTSWTPPESYPDFDIVNVADV 66
           + +VV+QV+I GF    K ++L  YLE+++GL V RCRLKTSWTP  SYP+F+I++ +++
Sbjct: 2   KNLVVSQVTISGFGESTKTKELTDYLENKVGLLVWRCRLKTSWTPHGSYPNFEIIDTSNI 61

Query: 67  IKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVNQRRRT 126
            K D Y++VVPHAFVH    D+    + AA +++L L  + LK SL  E+PY +N     
Sbjct: 62  PKFDCYERVVPHAFVHC---DAHKSLMDAAEQSKLILGGQPLKFSLSSENPYTLN----- 121

Query: 127 KVPFKLSNVLVDIGNL 142
             P+KL+ V ++IG L
Sbjct: 122 --PYKLTGVSLEIGTL 127

BLAST of CmaCh05G003840 vs. TAIR10
Match: AT2G19930.1 (AT2G19930.1 RNA-dependent RNA polymerase family protein)

HSP 1 Score: 112.8 bits (281), Expect = 1.4e-24
Identity = 117/492 (23.78%), Postives = 201/492 (40.85%), Query Frame = 1

Query: 577  DVERNDYIFSDGIGTITPDLAQEVADKLKLGG-------------SPPCAYQIR--YAG- 636
            D  +   I SDG G I+ DLA+     +  G               PP   Q R  Y G 
Sbjct: 390  DKNKKPCIHSDGTGYISEDLARMCPLNIFKGKCLRSESIQEACYQDPPLLIQFRMFYDGY 449

Query: 637  ------------CKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWTRFQPGFLNR 696
                        C   V   PS    I+++  PS++ F + + +  + +    +   L++
Sbjct: 450  AVKGTFLLNKKLCPRTVQVRPSM---IKVSKDPSLSNFSTFNALEVVTTSNPPKRTKLSK 509

Query: 697  QIITLLSTLNVPDENFWSMQETMVSKLDRMITDTNVAFDVLTASCAEQGNAAAIMLSAGF 756
             ++ LLS   +P+E F  +    + +   +  +   A +            AA M+  G 
Sbjct: 510  NLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKRAALNAALNYGEMDDQNAAQMILVGI 569

Query: 757  EPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQEGQ-CFIQVSTP 816
             P  EPHL+  L  +   +   L+   ++ VT+  + MG  D +  L+E + C I  S  
Sbjct: 570  -PLDEPHLKNYLSILLKTEKNDLKA-GKLPVTESYYLMGTVDPTGALKEDEVCVILESGQ 629

Query: 817  LLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELHHLYD---- 876
                                  I G V++ +NP LH GD+ IL+A     L         
Sbjct: 630  ----------------------ISGEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSKF 689

Query: 877  CLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTLTREVT 936
             + FPQ G R   +E +G D DGD+YFI+ +  L+   + S P ++          R  +
Sbjct: 690  AVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPELLENFKPSEPWVSLTPPSKSNSGRAPS 749

Query: 937  RLDIME-------------FFAKNMIN---ESLGTICNAHVVHAD--RSEYGALDENCIK 996
            +L   E             F A N+I    +S  TI +  ++  D    E   + +  ++
Sbjct: 750  QLSPEELEEELFEMFLTAGFHASNVIGIAADSWLTIMDRFLILGDDRAEEKAEMKKKMLE 809

Query: 997  LSELAATAVDFPKTGKIVTMPPHLKPKLYPDFMGKQATQSYKSTKILGRMYRRIRDVYDE 1018
            L ++   A+D PK G  V +P  LKP ++P +M  +  + ++ST ILG ++  ++    E
Sbjct: 810  LIDIYYDALDAPKKGDKVYLPNKLKPDIFPHYM--ERDKKFQSTSILGLIFDFVKSQTTE 852

BLAST of CmaCh05G003840 vs. NCBI nr
Match: gi|659088868|ref|XP_008445204.1| (PREDICTED: RNA-dependent RNA polymerase 6 [Cucumis melo])

HSP 1 Score: 2275.4 bits (5895), Expect = 0.0e+00
Identity = 1085/1197 (90.64%), Postives = 1145/1197 (95.66%), Query Frame = 1

Query: 1    MGSEESEKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDIV 60
            MGSEESEKIVVTQVS GGFDSDVKA+DLMSYLESEIGLVDRCRLKTSWTPPESYPDF++ 
Sbjct: 1    MGSEESEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS 60

Query: 61   NVADVIKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVN 120
            NVA+VIKSDDYKKVVPHAFVHF  PDSAA ALHAAGR EL  N +LLK SLGPESP+H+N
Sbjct: 61   NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELLFNGKLLKASLGPESPFHIN 120

Query: 121  QRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFS 180
            QRRRTKVPFKLS+V VDIGNLTC DGFSVAWRGPSSGMDFLVDPFDGTCKFCFT+DTAFS
Sbjct: 121  QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS 180

Query: 181  FKDNNKHTVLKCDYKVEFLVRDINQIKRYTDISCYVILLQLTSSPCIWYRTADDDIAKSV 240
            FKDNNK+TVLKCDYK+EF+VRDINQIKRYTD SCYVILLQLTSSPCIWYRTADDDIAKSV
Sbjct: 181  FKDNNKYTVLKCDYKLEFIVRDINQIKRYTDTSCYVILLQLTSSPCIWYRTADDDIAKSV 240

Query: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLKR 300
            PYDLLDDDDPWIRTTDFTISGAIGRCNT+RVSVPPRYGIKLNNAMNYLKEQRVHQ SL R
Sbjct: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR 300

Query: 301  PPKILNEPDYGVQITDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRNQ 360
            PPKILNEPDYGVQ+TDHFFCI YKEDISFE+LFLVNAVMHKGIINQHQM+DRFFDLLRNQ
Sbjct: 301  PPKILNEPDYGVQMTDHFFCIFYKEDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ 360

Query: 361  PNEVSLAALSHIHTYRHPVPDACKRLKHVQEWLLKNPRLWKRSKELVDIIEIRRLVITPS 420
            PNEV+LAALSHIH+YR PV DACK+LK VQEWLLKNP LWKRSKELVDI+EIRRLVITPS
Sbjct: 361  PNEVNLAALSHIHSYRRPVLDACKKLKLVQEWLLKNPTLWKRSKELVDIVEIRRLVITPS 420

Query: 421  KAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480
            KAYCFPPEVELSNRVLRR+KDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF
Sbjct: 421  KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480

Query: 481  PQKTKIFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMGR 540
            PQKTKIF RMKHILKHGF+LCGRKYSFLAYSSNQLRDQSAWFF+ECK+++VD IL WMG+
Sbjct: 481  PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKNISVDGILGWMGK 540

Query: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVDHQLPDVERNDYIFSDGIGTITPDLAQEV 600
            FTNKNVAKCAARIGQCFSSTYATIEVPRNMV+H L DVERN Y+FSDGIGTITPDLAQEV
Sbjct: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHNLQDVERNGYVFSDGIGTITPDLAQEV 600

Query: 601  ADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWTR 660
            ADKLK+ GS PCAYQIRYAG KGVVA+WPSK DGIRLALRPSMNKF+SDHRILEICSWTR
Sbjct: 601  ADKLKMDGSLPCAYQIRYAGYKGVVATWPSKEDGIRLALRPSMNKFESDHRILEICSWTR 660

Query: 661  FQPGFLNRQIITLLSTLNVPDENFWSMQETMVSKLDRMITDTNVAFDVLTASCAEQGNAA 720
            FQPGFLNRQIITLLSTL+VPDE FWSMQETM+SKLDRMITDT+VAF+VLTASCAEQGNAA
Sbjct: 661  FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA 720

Query: 721  AIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQEGQC 780
            AIMLSAGFEP+TEPHLRGMLMCIRAAQLWGLREKARIFVT+GRWCMGCFDES VLQEGQC
Sbjct: 721  AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC 780

Query: 781  FIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840
            FIQVSTPLLE+CFSKHGSLF ETKNNLTV+RGTVVIAKNPCLHPGDVRILEAVDAPELHH
Sbjct: 781  FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840

Query: 841  LYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTLTR 900
            LYDCLVFPQNGERPHTNEASGSDLDGDLYF TWDENLIPPS+KSWPPM Y  A+VKTL R
Sbjct: 841  LYDCLVFPQNGERPHTNEASGSDLDGDLYFTTWDENLIPPSKKSWPPMEYAPADVKTLQR 900

Query: 901  EVTRLDIMEFFAKNMINESLGTICNAHVVHADRSEYGALDENCIKLSELAATAVDFPKTG 960
            ++TRLDIMEFFAKNMINESLGTICNAHVVHADRS+YGALDENCI+LSELAATAVDFPKTG
Sbjct: 901  KITRLDIMEFFAKNMINESLGTICNAHVVHADRSKYGALDENCIQLSELAATAVDFPKTG 960

Query: 961  KIVTMPPHLKPKLYPDFMGKQATQSYKSTKILGRMYRRIRDVY-DEDMITACELNFTPGD 1020
            KIVTMPPHLKPKLYPDFMGK+ATQSYKSTKILG+MYRRIRD Y D+DMIT+ ELNFTPGD
Sbjct: 961  KIVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD 1020

Query: 1021 VYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLLGQYKVSREEEIVTGHIWSMPKYSSRK 1080
            V+YDVDLEVAGA DFIAEAWNQKCSYDGQLSGLLGQYKV+REEEIVTGHIWSMPKY SRK
Sbjct: 1021 VHYDVDLEVAGAEDFIAEAWNQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK 1080

Query: 1081 QGELKEKLKHSYTTLKKEFRQVFENIGPEFEQLTDDERNALYERKASAWYQVTYHPTWLK 1140
            QGELKEKLKHSY+TLKK+FRQVFENIGPEFEQLT DERNA YE+KASAWYQV YHPTWLK
Sbjct: 1081 QGELKEKLKHSYSTLKKDFRQVFENIGPEFEQLTCDERNAFYEKKASAWYQVAYHPTWLK 1140

Query: 1141 KSMELREPDIAEATPMLSFPWVAVDYLARIKIKCRKMKSVDPTKPINSLASYLSDRM 1197
            KS+ELREPD  EA PMLSFPW+A DYLARIKIKCR+MKS DPTKPINSL SYLS+R+
Sbjct: 1141 KSLELREPDAPEAIPMLSFPWIAADYLARIKIKCRRMKSFDPTKPINSLVSYLSERI 1197

BLAST of CmaCh05G003840 vs. NCBI nr
Match: gi|525507190|ref|NP_001267634.1| (RNA-dependent RNA polymerase 6-like [Cucumis sativus])

HSP 1 Score: 2257.3 bits (5848), Expect = 0.0e+00
Identity = 1076/1197 (89.89%), Postives = 1140/1197 (95.24%), Query Frame = 1

Query: 1    MGSEESEKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDIV 60
            MGSEE EKIVVTQVS GGFDSDVKA+DLMSYLESEIGLVDRCRLKTSWTPPESYPDF++ 
Sbjct: 1    MGSEEGEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS 60

Query: 61   NVADVIKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVN 120
            NVA+VIKSDDYKKVVPHAFVHF  PDSAA ALHAAGR EL  ND+LLK SLGPESP+H+N
Sbjct: 61   NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHIN 120

Query: 121  QRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFS 180
            QRRRTKVPFKLS+V VDIGNLTC DGFSVAWRGPSSGMDFLVDPFDGTCKFCFT+DTAFS
Sbjct: 121  QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS 180

Query: 181  FKDNNKHTVLKCDYKVEFLVRDINQIKRYTDISCYVILLQLTSSPCIWYRTADDDIAKSV 240
            FKDNNKHT LKCDYK+EF+VRDINQI RYTD SCYVILLQLT+SPCIWYRTADDDIAK V
Sbjct: 181  FKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKLV 240

Query: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLKR 300
            PYDLLDDDDPWIRTTDFTISGAIGRCNT+RVSVPPRYGIKLNNAMNYLKEQRVHQ SL R
Sbjct: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR 300

Query: 301  PPKILNEPDYGVQITDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRNQ 360
            PPKILNEPDYGVQ+TDHFFCI YK+DISFE+LFLVNAVMHKGIINQHQM+DRFFDLLRNQ
Sbjct: 301  PPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ 360

Query: 361  PNEVSLAALSHIHTYRHPVPDACKRLKHVQEWLLKNPRLWKRSKELVDIIEIRRLVITPS 420
            PNEV+LAALSHIH +R PV DACK+LK VQEWLLKNP L KRSKELVDI+EIRRLVITPS
Sbjct: 361  PNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPS 420

Query: 421  KAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480
            KAYCFPPEVELSNRVLRR+KDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF
Sbjct: 421  KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480

Query: 481  PQKTKIFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMGR 540
            PQKTKIF RMKHILKHGF+LCGRKYSFLAYSSNQLRDQSAWFF+ECK ++VD+IL WMG+
Sbjct: 481  PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGK 540

Query: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVDHQLPDVERNDYIFSDGIGTITPDLAQEV 600
            FTNKNVAKCAARIGQCFSSTYATIEVPRNMV+H L DVERN Y+FSDGIGTITPDLAQEV
Sbjct: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEV 600

Query: 601  ADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWTR 660
            ADKLK+ GSPPCAYQIRYAG KGVVA+WPSK DGIRLALRPSMNKF+S+HRILEICSWTR
Sbjct: 601  ADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTR 660

Query: 661  FQPGFLNRQIITLLSTLNVPDENFWSMQETMVSKLDRMITDTNVAFDVLTASCAEQGNAA 720
            FQPGFLNRQIITLLSTL+VPDE FWSMQETM+SKLDRMITDT+VAF+VLTASCAEQGNAA
Sbjct: 661  FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA 720

Query: 721  AIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQEGQC 780
            AIMLSAGFEP+TEPHLRGMLMCIRAAQLWGLREKARIFVT+GRWCMGCFDES VLQEGQC
Sbjct: 721  AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC 780

Query: 781  FIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840
            FIQVSTPLLE+CFSKHGSLF ETKNNLTV+RGTVVIAKNPCLHPGDVRILEAVDAPELHH
Sbjct: 781  FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840

Query: 841  LYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTLTR 900
            LYDCLVFP+NGERPHTNEASGSDLDGDLYF TWD NLIPPS+KSWPPM Y  AEVKTL R
Sbjct: 841  LYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQR 900

Query: 901  EVTRLDIMEFFAKNMINESLGTICNAHVVHADRSEYGALDENCIKLSELAATAVDFPKTG 960
            ++TR DIMEFFAKNMINESLGTICNAHVVHADRS++GALDENCI+LSELAATAVDFPKTG
Sbjct: 901  KITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTG 960

Query: 961  KIVTMPPHLKPKLYPDFMGKQATQSYKSTKILGRMYRRIRDVY-DEDMITACELNFTPGD 1020
            K+VTMPPHLKPKLYPDFMGK+ATQSYKSTKILG+MYRRIRD Y D+DMIT+ ELNFTPGD
Sbjct: 961  KLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD 1020

Query: 1021 VYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLLGQYKVSREEEIVTGHIWSMPKYSSRK 1080
            V+YDVDLEVAGA DFIAEAW+QKCSYDGQLSGLLGQYKV+REEEIVTGHIWSMPKY SRK
Sbjct: 1021 VHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK 1080

Query: 1081 QGELKEKLKHSYTTLKKEFRQVFENIGPEFEQLTDDERNALYERKASAWYQVTYHPTWLK 1140
            QGELKEKLKHSY+TLKK+FRQVFEN+GPEFEQLT DERNALYE+KASAWYQV YHPTWLK
Sbjct: 1081 QGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLK 1140

Query: 1141 KSMELREPDIAEATPMLSFPWVAVDYLARIKIKCRKMKSVDPTKPINSLASYLSDRM 1197
            KS+ELREPD  EA PMLSFPW+A DYLARIKIKCR+ KS DPTKPINSLASYLSDRM
Sbjct: 1141 KSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1197

BLAST of CmaCh05G003840 vs. NCBI nr
Match: gi|802627169|ref|XP_012076580.1| (PREDICTED: RNA-dependent RNA polymerase 6-like [Jatropha curcas])

HSP 1 Score: 1851.3 bits (4794), Expect = 0.0e+00
Identity = 873/1198 (72.87%), Postives = 1022/1198 (85.31%), Query Frame = 1

Query: 1    MGSEESEK-IVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDI 60
            M +++SEK  VVTQVS GGFD+ VKA+DL++YLE EIG V RCRLKTSWTPPESYP+F+I
Sbjct: 1    METQKSEKDTVVTQVSFGGFDNHVKAKDLVAYLEEEIGQVWRCRLKTSWTPPESYPNFEI 60

Query: 61   VNVADVIKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHV 120
             + A + ++ +YK+V PHAFVHFA  +SA  A +AAG  ELFLNDR LKVSLGPE+P+H+
Sbjct: 61   TDAAAIHRTHEYKRVEPHAFVHFASAESATWAKNAAGHCELFLNDRPLKVSLGPENPFHL 120

Query: 121  NQRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAF 180
            NQRRR  +PFKLS+V ++IG L  +D F V WRGPSSG+DFLVDPFDGTCKFCFT DTAF
Sbjct: 121  NQRRRKNIPFKLSDVCIEIGTLVSRDEFLVGWRGPSSGVDFLVDPFDGTCKFCFTMDTAF 180

Query: 181  SFKDNNKHTVLKCDYKVEFLVRDINQIKRYTDISCYVILLQLTSSPCIWYRTADDDIAKS 240
            S KD  KH +++CD+K+EFLVRDIN++K+YTD SC VILLQL S+P +WYRTADDDI  S
Sbjct: 181  SIKDTTKHAIIRCDFKLEFLVRDINEVKQYTDTSCIVILLQLASAPLVWYRTADDDIEVS 240

Query: 241  VPYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLK 300
            VP+DLLDDDDPWIRTTDFT SGAIGRCN YRVS+PPR+G KL  A N+LKE+RV + SL+
Sbjct: 241  VPFDLLDDDDPWIRTTDFTPSGAIGRCNFYRVSIPPRHGAKLKRARNFLKERRVQEDSLR 300

Query: 301  RPPKILNEPDYGVQITDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRN 360
            RP KI+NEPDYG+ ++D FFCIH+KE I+FE++FLVNAVMHKGI NQHQ++D FFDLLRN
Sbjct: 301  RPLKIVNEPDYGMPMSDPFFCIHHKEGIAFEIMFLVNAVMHKGIFNQHQLSDNFFDLLRN 360

Query: 361  QPNEVSLAALSHIHTYRHPVPDACKRLKHVQEWLLKNPRLWKRSKELVDIIEIRRLVITP 420
            Q  ++++AAL HI +Y+ PV DA K LK VQEWLLKNP+L+KRSK+L DI+EIRRL +TP
Sbjct: 361  QSLDINVAALKHICSYKQPVFDAHKGLKAVQEWLLKNPKLFKRSKQLDDIVEIRRLALTP 420

Query: 421  SKAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSS 480
            ++AYC PPEVELSNRVLR++K++ADRFLRVTFMDEG++ IN++  TYYVAPIV++ITS+S
Sbjct: 421  TRAYCLPPEVELSNRVLRKYKNIADRFLRVTFMDEGLQTINANTLTYYVAPIVRDITSTS 480

Query: 481  FPQKTKIFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMG 540
            F QKT+IF R+K IL  GF LCGR+YSFLA+SSNQLRD+SAWFF+E   ++V  I +WMG
Sbjct: 481  FSQKTRIFRRVKSILTDGFNLCGRRYSFLAFSSNQLRDRSAWFFAEDGKISVGQIRKWMG 540

Query: 541  RFTNKNVAKCAARIGQCFSSTYATIEVPRNMVDHQLPDVERNDYIFSDGIGTITPDLAQE 600
            RFTN+N+AKCAAR+GQCFSSTYAT+EVP + V+H LPD+ERN YIFSDGIGTITPDLA+E
Sbjct: 541  RFTNRNIAKCAARMGQCFSSTYATVEVPSSEVNHALPDIERNGYIFSDGIGTITPDLAKE 600

Query: 601  VADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWT 660
            VA+KLKL  + PCAYQIRYAGCKGVVA WP++GDGIRL+LRPSMNKFQS+H  LEICSWT
Sbjct: 601  VAEKLKLDINLPCAYQIRYAGCKGVVACWPAQGDGIRLSLRPSMNKFQSNHTTLEICSWT 660

Query: 661  RFQPGFLNRQIITLLSTLNVPDENFWSMQETMVSKLDRMITDTNVAFDVLTASCAEQGNA 720
            RFQPGFLNRQIITLLSTLNV DE FW MQ  MVSKL++M+TD +VAFDV+T SCAEQGN 
Sbjct: 661  RFQPGFLNRQIITLLSTLNVSDEVFWEMQTAMVSKLNKMLTDADVAFDVITKSCAEQGNT 720

Query: 721  AAIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQEGQ 780
            AAIMLSAGF+PQ EPHLRGML CIRAAQ WGLREKARIFVT GRW MGC DE  VL++GQ
Sbjct: 721  AAIMLSAGFKPQNEPHLRGMLTCIRAAQFWGLREKARIFVTSGRWLMGCLDELGVLEQGQ 780

Query: 781  CFIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELH 840
            CFIQVS P LE CFSKHGS F ETK NL VI+GTVVIAKNPCLHPGDVRILEAVDAP LH
Sbjct: 781  CFIQVSNPCLETCFSKHGSKFSETKKNLQVIKGTVVIAKNPCLHPGDVRILEAVDAPGLH 840

Query: 841  HLYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTLT 900
            HL+DCLVFPQ G+RPHTNEASGSDLDGDLYF+TWD+NLIPPS+KSW PM Y AAE K L 
Sbjct: 841  HLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDDNLIPPSKKSWTPMQYDAAEAKLLN 900

Query: 901  REVTRLDIMEFFAKNMINESLGTICNAHVVHADRSEYGALDENCIKLSELAATAVDFPKT 960
            R V+  DI++FFAKNM+NE+LG ICNAHVVHAD SE+GALDENCIKL+ELAATAVDFPKT
Sbjct: 901  RPVSHQDIIDFFAKNMVNENLGAICNAHVVHADLSEHGALDENCIKLAELAATAVDFPKT 960

Query: 961  GKIVTMPPHLKPKLYPDFMGKQATQSYKSTKILGRMYRRIRDVY-DEDMITACELNFTPG 1020
            GK+VTMPP+LKPK+YPDFMGK+  QSYKSTKILGR+YR+I D Y D+D     ELN   G
Sbjct: 961  GKLVTMPPYLKPKMYPDFMGKEEYQSYKSTKILGRLYRQIIDAYGDDDAAAFSELNCLSG 1020

Query: 1021 DVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLLGQYKVSREEEIVTGHIWSMPKYSSR 1080
            D+ YD DLEV G+AD+I EAW+QKCSYDGQL GLLGQYKV REEE+VTGHIWSMP  +SR
Sbjct: 1021 DIPYDADLEVLGSADYILEAWDQKCSYDGQLKGLLGQYKVKREEELVTGHIWSMPMSNSR 1080

Query: 1081 KQGELKEKLKHSYTTLKKEFRQVFENIGPEFEQLTDDERNALYERKASAWYQVTYHPTWL 1140
            KQG+LKE+LKHSY+ LKKEFRQVFE +  + EQLTDDE+N  YERKASAWYQV YHP W+
Sbjct: 1081 KQGDLKERLKHSYSALKKEFRQVFEGMNLDVEQLTDDEKNLQYERKASAWYQVAYHPKWI 1140

Query: 1141 KKSMELREPDIAEATPMLSFPWVAVDYLARIKIKCRKMKSVDPTKPINSLASYLSDRM 1197
            KKS+EL+E D      MLSF W+A DYLARIKIK R  + +D  KP+NSL  YL+DR+
Sbjct: 1141 KKSLELQESDAPGNATMLSFSWIAADYLARIKIKRRGTEGIDTAKPVNSLVKYLTDRI 1198

BLAST of CmaCh05G003840 vs. NCBI nr
Match: gi|1009137114|ref|XP_015885879.1| (PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba])

HSP 1 Score: 1835.1 bits (4752), Expect = 0.0e+00
Identity = 872/1198 (72.79%), Postives = 1020/1198 (85.14%), Query Frame = 1

Query: 1    MGSEESEK-IVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDI 60
            MGS+E+EK +VVTQVS+GGFD  V+A+DL  +LE EIGLV RCRLKTS TPPESYPD+ I
Sbjct: 1    MGSKENEKQMVVTQVSLGGFDRHVRAKDLSDFLEDEIGLVYRCRLKTSSTPPESYPDYTI 60

Query: 61   VNVADVIKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHV 120
             + A + + DDYKKV PHAFVHFAL +SA   L AAGR EL LNDR LKVSLGPE+PY +
Sbjct: 61   -DTAAIERKDDYKKVEPHAFVHFALAESAKWILDAAGRCELILNDRPLKVSLGPENPYRL 120

Query: 121  NQRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAF 180
            NQRRRT  P KLS+V+VDIG L  +D F +AWRGP  G+DFLVDPFDGTCKFCFTRDTAF
Sbjct: 121  NQRRRTTTPIKLSDVVVDIGTLVTRDQFFIAWRGPPYGVDFLVDPFDGTCKFCFTRDTAF 180

Query: 181  SFKDNNKHTVLKCDYKVEFLVRDINQIKRYTDISCYVILLQLTSSPCIWYRTADDDIAKS 240
            SFK +  H V+KCD+K+EFLVRDIN+ K+YTD S  V+LLQL S+P IWYRTADDDI  S
Sbjct: 181  SFKGSLNHAVIKCDFKMEFLVRDINEFKQYTDTSYLVLLLQLNSAPRIWYRTADDDIDDS 240

Query: 241  VPYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLK 300
            VPYD+LDDDDPWIRTTDFT SGAIGR N+YR+SVPPR+G KL  A++YL+E+RVH  SL+
Sbjct: 241  VPYDMLDDDDPWIRTTDFTPSGAIGRSNSYRISVPPRHGAKLKKAISYLRERRVHHDSLR 300

Query: 301  RPPKILNEPDYGVQITDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRN 360
             P +I  EPD+ + ++D FFCIHYKEDI FE +FLVNAV+HKGI NQHQ++D FF+LLRN
Sbjct: 301  WPLRIQKEPDFDMPMSDPFFCIHYKEDIDFETMFLVNAVIHKGIFNQHQISDGFFNLLRN 360

Query: 361  QPNEVSLAALSHIHTYRHPVPDACKRLKHVQEWLLKNPRLWKRSKELVDIIEIRRLVITP 420
            Q  EV++AAL HI +Y+ PV DAC+RLK VQEWLL++P+L+K+ K L DI E+RRLVITP
Sbjct: 361  QMKEVNVAALKHISSYKRPVFDACRRLKVVQEWLLRDPKLFKKPKRLDDIAEVRRLVITP 420

Query: 421  SKAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSS 480
            ++AYC PPEVELSNRVLR +K+VADRFLRVTFMDEGM+ INS+V TY+VA IV+EITS+S
Sbjct: 421  TRAYCLPPEVELSNRVLRNYKEVADRFLRVTFMDEGMQTINSNVLTYHVASIVREITSNS 480

Query: 481  FPQKTKIFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMG 540
            FPQKTK+F R+K IL +GFYLCGRKYSFLA+SSNQLRD+SAWFF+E K++ V  +  WMG
Sbjct: 481  FPQKTKVFQRIKSILTNGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKNINVFEVKSWMG 540

Query: 541  RFTNKNVAKCAARIGQCFSSTYATIEVPRNMVDHQLPDVERNDYIFSDGIGTITPDLAQE 600
            RFTN+NVAKCAAR+G CFSSTYA++EVP   V+   PD++RN Y FSDGIG ITPDLA E
Sbjct: 541  RFTNRNVAKCAARMGLCFSSTYASVEVPSTQVNRGFPDIKRNGYTFSDGIGKITPDLALE 600

Query: 601  VADKLKLGGSPPCAYQIRYAGCKGVVASW-PSKGDGIRLALRPSMNKFQSDHRILEICSW 660
            VA KLKL  +PPCAYQIRYAG KGVVA W P+  DG RL+LRPSM+KFQS+H ILEICSW
Sbjct: 601  VAQKLKLERNPPCAYQIRYAGFKGVVACWKPTDDDGARLSLRPSMDKFQSNHTILEICSW 660

Query: 661  TRFQPGFLNRQIITLLSTLNVPDENFWSMQETMVSKLDRMITDTNVAFDVLTASCAEQGN 720
            TRFQPGFLNRQI+TLLS LNV DE FW+MQETM+ KL++M+ DT++AFDVLTASCAEQGN
Sbjct: 661  TRFQPGFLNRQIVTLLSALNVSDEIFWNMQETMIFKLNQMLIDTDIAFDVLTASCAEQGN 720

Query: 721  AAAIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQEG 780
             AAIMLSAGF PQ EPHLRGML CIRAAQLWGLREKARIFV  GRW MGC DE  VL++G
Sbjct: 721  VAAIMLSAGFSPQKEPHLRGMLTCIRAAQLWGLREKARIFVPSGRWLMGCLDELGVLEQG 780

Query: 781  QCFIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPEL 840
            QCFIQVS P LE CFSKHGS F+E  +NL VI+G VVIAKNPCLHPGDVRILEAVD P+L
Sbjct: 781  QCFIQVSNPSLENCFSKHGSRFNERNDNLEVIKGFVVIAKNPCLHPGDVRILEAVDVPDL 840

Query: 841  HHLYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTL 900
            HHLYDCLVFPQ GERPHTNEASGSDLDGDLYF+TWDENLIPPS+KSW PM Y AAE K L
Sbjct: 841  HHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMQYDAAETKQL 900

Query: 901  TREVTRLDIMEFFAKNMINESLGTICNAHVVHADRSEYGALDENCIKLSELAATAVDFPK 960
            TR VT+ DI+EFF+KNM+NE+LGTICNAHVVHAD SE+GALDE C+KL++LAATAVDFPK
Sbjct: 901  TRPVTQEDIIEFFSKNMVNENLGTICNAHVVHADLSEHGALDEKCLKLADLAATAVDFPK 960

Query: 961  TGKIVTMPPHLKPKLYPDFMGKQATQSYKSTKILGRMYRRIRDVYDEDMITACELNFTPG 1020
            TGKIVTMP +LKPKLYPDFMGK   QSYKS KILG++YR+I+D YDED+  + E+NF P 
Sbjct: 961  TGKIVTMPFNLKPKLYPDFMGKDEYQSYKSNKILGKLYRKIKDAYDEDVTASSEINFLPS 1020

Query: 1021 DVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLLGQYKVSREEEIVTGHIWSMPKYSSR 1080
            D+ YD+DLEV+GA+DFI +AW QKCSYDGQL+GLLGQYKV+REEE+VTGHIWSMPKYSSR
Sbjct: 1021 DIPYDIDLEVSGASDFIVDAWEQKCSYDGQLNGLLGQYKVNREEEVVTGHIWSMPKYSSR 1080

Query: 1081 KQGELKEKLKHSYTTLKKEFRQVFENIGPEFEQLTDDERNALYERKASAWYQVTYHPTWL 1140
            KQGELKE+LKHSY+ LKKEFRQ+FE +  +FE+L+DDE+N +YE+KASAWYQVTYHP W+
Sbjct: 1081 KQGELKERLKHSYSALKKEFRQIFEKMEEKFEELSDDEKNIIYEQKASAWYQVTYHPEWV 1140

Query: 1141 KKSMELREPDIAEATPMLSFPWVAVDYLARIKIKCRKMKSVDPTKPINSLASYLSDRM 1197
            KKS++L+EPD +    MLSF W+A DYL RIKI+CR + +VD  KPIN+L  YLSDRM
Sbjct: 1141 KKSLDLQEPDGSRYAVMLSFAWIAADYLTRIKIRCRGVGNVDCDKPINALGKYLSDRM 1197

BLAST of CmaCh05G003840 vs. NCBI nr
Match: gi|224141893|ref|XP_002324295.1| (SILENCING DEFECTIVE 1 family protein [Populus trichocarpa])

HSP 1 Score: 1825.8 bits (4728), Expect = 0.0e+00
Identity = 851/1194 (71.27%), Postives = 1020/1194 (85.43%), Query Frame = 1

Query: 6    SEKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDIVNVADV 65
            +++ VVTQVS+GGFD  V A+DL+ YL+  IGLV RCRLKTSWTPPESYP+F+I ++  +
Sbjct: 7    AKETVVTQVSVGGFDIHVTAKDLLEYLDRAIGLVWRCRLKTSWTPPESYPNFEITDITKI 66

Query: 66   IKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVNQRRRT 125
             +++DY++VVPHAFVHFALP SA  A++A+GR ELFLN++ LKVSLGP++P+ +NQRRRT
Sbjct: 67   ERTEDYRRVVPHAFVHFALPQSATLAMNASGRCELFLNNKALKVSLGPKNPFTLNQRRRT 126

Query: 126  KVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFSFKDNN 185
              PFKLS+V  +IGNL  +D F V WRGP SG+DFLVDPFDGTCKFCF+R+TAFS K  +
Sbjct: 127  TTPFKLSDVGFEIGNLVSRDEFFVGWRGPPSGVDFLVDPFDGTCKFCFSRNTAFSLKSTS 186

Query: 186  KHTVLKCDYKVEFLVRDINQIKRYTDISCYVILLQLTSSPCIWYRTADDDIAKSVPYDLL 245
            +H V+KCD+KVEFLVRDIN+I +YT+ SC V+LLQL S+P +WYRTADDDI   VP+DLL
Sbjct: 187  EHAVIKCDFKVEFLVRDINEIIQYTETSCLVLLLQLASAPWVWYRTADDDIEAWVPFDLL 246

Query: 246  DDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVH---QASLKRPP 305
            DDDDPWIRTTDFT SGAIGRC++YRVS+PPR+G KL  A+ YLKE+RV    + + +R  
Sbjct: 247  DDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGSKLRKAVKYLKERRVQVLQEENHRRRI 306

Query: 306  KILNEPDYGVQITDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRNQPN 365
            +IL+EPD+G+ ++D FFCIH+KE I+FE+LFLVNAVMHKGI NQHQ+++ FFDLLRNQ  
Sbjct: 307  RILDEPDFGMPMSDPFFCIHHKEGIAFEVLFLVNAVMHKGIFNQHQLSNDFFDLLRNQHT 366

Query: 366  EVSLAALSHIHTYRHPVPDACKRLKHVQEWLLKNPRLWKRSKELVDIIEIRRLVITPSKA 425
            EV+++AL HI TYR PV +A +RLK VQEWLLKNP L+K  K+L D++EIRRLVITP+KA
Sbjct: 367  EVNVSALKHICTYRRPVFNAYRRLKAVQEWLLKNPNLFKNPKQLGDVVEIRRLVITPTKA 426

Query: 426  YCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSFPQ 485
            YC PPEVELSNRVLR++KDVADRFLRVTFMDEG++++NS+V  YYVAPIV++ITS+SFPQ
Sbjct: 427  YCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQRMNSNVLNYYVAPIVRDITSNSFPQ 486

Query: 486  KTKIFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMGRFT 545
            KT+IF R++ IL  GFYLCGR+YSFLA+S+NQLRDQSAWFFSE ++++V  +  WMG+FT
Sbjct: 487  KTRIFKRVRSILTEGFYLCGRRYSFLAFSANQLRDQSAWFFSEERNISVLDVKSWMGKFT 546

Query: 546  NKNVAKCAARIGQCFSSTYATIEVPRNMVDHQLPDVERNDYIFSDGIGTITPDLAQEVAD 605
            N+N+AKCAAR+GQCFSSTYATIEVP   V+  LPD+ERN Y+FSDGIG ITPDLA+EVA+
Sbjct: 547  NRNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIERNGYVFSDGIGIITPDLAREVAE 606

Query: 606  KLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWTRFQ 665
            KLKL   PPCAYQIRYAGCKGVVA WP KGDG+RL+LRPSMNKFQS+H  LEICSWTRFQ
Sbjct: 607  KLKLDIDPPCAYQIRYAGCKGVVACWPGKGDGVRLSLRPSMNKFQSNHTTLEICSWTRFQ 666

Query: 666  PGFLNRQIITLLSTLNVPDENFWSMQETMVSKLDRMITDTNVAFDVLTASCAEQGNAAAI 725
            PGFLNRQIITLLSTLNVPD  FW MQETMVSKL++M  +++VAFDVLTASCA+QGN AAI
Sbjct: 667  PGFLNRQIITLLSTLNVPDAVFWKMQETMVSKLNQMFVNSDVAFDVLTASCADQGNVAAI 726

Query: 726  MLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQEGQCFI 785
            MLSAGF+P  EPHLRGML C+RAAQLW LREK RIFV  GRW MGC DE  +L++GQCFI
Sbjct: 727  MLSAGFKPDREPHLRGMLTCVRAAQLWDLREKTRIFVPSGRWLMGCLDELGMLEQGQCFI 786

Query: 786  QVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELHHLY 845
            QVS   LE+CF KHG+ F E + NL VI+GTVVIAKNPCLHPGDVR+LEAVD P LHHLY
Sbjct: 787  QVSNSSLEKCFMKHGAKFSEAEKNLQVIKGTVVIAKNPCLHPGDVRVLEAVDVPGLHHLY 846

Query: 846  DCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTLTREV 905
            DCLVFPQ GERPHTNEASGSDLDGDLYF+TWDENLIPPS++SW PM Y AAE K L R V
Sbjct: 847  DCLVFPQKGERPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKLLARPV 906

Query: 906  TRLDIMEFFAKNMINESLGTICNAHVVHADRSEYGALDENCIKLSELAATAVDFPKTGKI 965
               DI+EFFAKNM+N++LG ICNAHVVHAD SEYGA D+NC+ L+ELAATAVDFPKTGK+
Sbjct: 907  NHQDIIEFFAKNMVNDNLGAICNAHVVHADLSEYGATDKNCLTLAELAATAVDFPKTGKV 966

Query: 966  VTMPPHLKPKLYPDFMGKQATQSYKSTKILGRMYRRIRDVYDEDMITACELNFTPGDVYY 1025
            V+MPP+LKPK+YPDFMGK+  QSYKS KILGR+YR+I+D YDED+  + ELN  PGD+ Y
Sbjct: 967  VSMPPYLKPKMYPDFMGKEEYQSYKSEKILGRLYRQIKDAYDEDVAASSELNLVPGDIPY 1026

Query: 1026 DVDLEVAGAADFIAEAWNQKCSYDGQLSGLLGQYKVSREEEIVTGHIWSMPKYSSRKQGE 1085
            D DLEV GA+D+I++AW+QKCSYDGQL+GLL QYKV REEE+VTGHIWSMPKYSSRKQGE
Sbjct: 1027 DSDLEVVGASDYISDAWDQKCSYDGQLNGLLSQYKVKREEEVVTGHIWSMPKYSSRKQGE 1086

Query: 1086 LKEKLKHSYTTLKKEFRQVFENIGPEFEQLTDDERNALYERKASAWYQVTYHPTWLKKSM 1145
            LK++LKHSY +LKKEFRQ+FE +  EFEQL D E+N LYE+KASAWYQV YHP W+KKS+
Sbjct: 1087 LKDRLKHSYNSLKKEFRQIFEKMDLEFEQLEDGEKNKLYEQKASAWYQVVYHPHWVKKSL 1146

Query: 1146 ELREPDIAEATPMLSFPWVAVDYLARIKIKCRKMKSVDPTKPINSLASYLSDRM 1197
            EL++PD A  + MLSF W+A DYLARIKI+ R+  +VD  KP+NSLA YL+DRM
Sbjct: 1147 ELQDPDGAGTSVMLSFAWIAADYLARIKIRHRETGNVDSAKPVNSLAKYLADRM 1200