Csa2G381730.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa2G381730.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	RNA-dependent RNA polymerase 6; contains IPR007855 (RNA-dependent RNA polymerase, eukaryotic-type)
Location	Chr2 : 19586928 .. 19591693 (+)
Sequence length	3594

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAACAAAGCAAAATCACGTAGTCATGGGCACGAAGACCGCTTTGCTCTCAGTCAATATTCCACCATAAATTATTACTTCACTCCTAAACCTTACTCAAGAAGCTATCCACCCATACCCATCAGCTTATATATTTAAAATCTTAATGTTCTCATTCTTCAGCAATCTGCAAAGATTTCTGATTCTTGGGAGTATCAGTTAGAGGAACCAAAATTCGCAAGTTATTGTTTCTTTGAGGTTAGTCGTTTCAATTTATCAAGAATGTCATTTCTTTTTCACTTTAAGAATTTGGGGTTTTTTGATATTGTTTGAAACTCTGTTTGGGAAAATGTGGGGTAAGGAATGGGTGAAACTGTTTGATGTTTATCATCTCATGGGTTTGGTAGATAAAAATTTACGTTTCTCCCTATTTAGCCTACTTCACAACCGCGGGGGGGCAGTTTTTGGAAATTTTGCCCTGTATGTATGACTTTACAAGAATCAGATAAGTTCAAAAGAATACAAGAAATCTGTTATGGGCAAATATTACTGAGAACTTGAGGATGAACTTCAACACTCAGTTTTCTGGAGTTGTTGATAGAACGGTTTTTTATTATTGTTTCATTATTTTATTTTACTTATGTATTCTGTGCTCATCAACTTAAGATTTTGTTTATAAAAGAAAACCTCTCAACTAATTTATTGAGTATTATGAGGAATTTAAATTGCCTTCTATTTTTCTCAGTCAGAGAAATAAATGGGGTCAGAAGAAGGTGAAAAGATAGTGGTAACTCAAGTCAGCTTTGGCGGATTTGACAGTGATGTTAAAGCTAGAGATCTTATGAGTTATCTGGAATCTGAGATTGGGCTTGTGGACAGATGTAGATTGAAAACTTCATGGACTCCTCCAGAATCGTACCCAGATTTTGAAGTCAGCAATGTTGCTAATGTTATAAAATCTGATGATTACAAGAAGGTGGTGCCTCATGCATTTGTACATTTTGTCTCACCTGACTCTGCTGCTGAGGCTCTACATGCTGCAGGTCGTGGTGAGCTTATTTTTAATGATAAATTGTTGAAGGCGAGTTTGGGGCCTGAGAGTCCTTTTCATATAAATCAGAGGCGAAGGACTAAGGTTCCCTTTAAGTTATCTGATGTGCAAGTTGATATAGGGAACTTAACTTGTCATGATGGGTTTTCAGTTGCTTGGAGAGGGCCTTCGAGTGGAATGGATTTTCTAGTGGATCCCTTTGATGGAACCTGTAAATTTTGTTTCACGAAGGATACTGCATTCTCTTTTAAAGATAACAACAAGCATACATTTTTGAAGTGTGATTACAAAATGGAGTTCATAGTGAGGGACATTAATCAGATCACAAGATATACGGATACTTCATGTTATGTTATTCTCTTGCAGCTTACAGCATCACCCTGCATTTGGTATAGAACAGCAGATGATGATATTGCCAAATTAGTTCCATATGATTTGTTGGACGATGATGATCCATGGATCCGGACAACAGATTTCACGATTAGTGGAGCTATTGGTCGTTGTAATACTTTCAGAGTTTCAGTCCCACCCCGCTATGGCATCAAGCTGAATAATGCCATGAATTATTTAAAAGAACAAAGAGTGCACCAGGTCTCCCTCAACCGGCCTCCCAAGATCCTGAATGAACCAGATTATGGTGTGCAAATGACTGATCACTTCTTTTGCATCCTTTATAAAAAAGACATATCCTTTGAGATATTATTTCTGGTAAATGCCGTAATGCACAAAGGGATAATCAACCAGCACCAAATGTCTGATAGATTTTTTGATTTGCTAAGAAACCAGCCCAATGAAGTTAATTTGGCTGCTTTAAGTCATATTCATGCTTTTAGACGTCCTGTATTGGATGCCTGTAAGAAGCTAAAACTTGTACAAGAATGGTTGTTGAAGAACCCTACACTTTTGAAAAGATCTAAAGAGCTGGTAGATATTGTTGAAATCAGGAGACTAGTAATAACTCCTTCAAAAGCATATTGCTTTCCACCTGAAGTTGAACTGTCCAATAGGGTTTTGAGAAGATACAAGGATGTTGCCGATAGGTTCCTCAGGGTTACCTTCATGGATGAAGGCATGAAGAAAATCAATTCACACGTTTATACCTATTATGTTGCCCCTATAGTAAAGGAAATTACTTCAAGCTCCTTTCCCCAGAAGACTAAAATATTTGCAAGGATGAAACATATTCTGAAACATGGATTTCACTTGTGTGGTAGGAAATACTCCTTTTTGGCGTATTCATCCAACCAACTGAGGGACCAATCAGCTTGGTTTTTTGCTGAATGCAAAAGTATAAGTGTTGATGCTATTTTGGGTTGGATGGGAAAATTTACCAATAAAAATGTTGCAAAGTGTGCTGCTAGAATTGGTCAGTGCTTTTCATCTACTTATGCAACAATTGAAGTTCCAAGAAACATGGTCAATCATGATCTTTCTGATGTTGAGAGGAATGGATATGTTTTCTCTGATGGGATTGGAACCATTACTCCTGATCTTGCGCAGGAAGTTGCAGACAAACTAAAAATGGATGGGAGCCCGCCCTGCGCTTACCAAATTAGATATGCAGGTTACAAAGGTGTTGTTGCCACTTGGCCATCCAAGAAGGACGGAATCAGACTTGCTTTAAGGCCAAGCATGAATAAATTTGAATCAAATCATAGAATCTTGGAGATCTGTTCATGGACTAGATTTCAGCCAGGTTTTCTTAATAGGCAGATTATAACCCTCCTTTCTACACTAAGTGTCCCTGATGAAATTTTCTGGAGTATGCAGGAGACTATGATTTCAAAACTGGATAGAATGATCACCGATACAGATGTGGCGTTTGAAGTTCTCACTGCATCCTGTGCCGAGCAAGGAAATGCAGCGGCAATTATGTTGAGTGCTGGTTTTGAACCTCGAACCGAACCTCATCTAAGGGGCATGCTAATGTGTATAAGAGCAGCACAGCTGTGGGGCCTTCGGGAAAAAGCAAGGATTTTTGTTACTGAGGGGAGGTGGTGTATGGGGTGTTTCGACGAGAGCGGCGTGTTACAAGAAGGTCAATGCTTCATCCAAGTATCCACTCCATTGCTTGAGAAGTGTTTCTCCAAGCATGGGTCTCTCTTTGCTGAGACAAAGAACAATCTTACTGTAGTAAGAGGGACTGTAGTCATAGCCAAAAATCCGTGCCTTCATCCAGGAGATGTGAGAATTCTTGAAGCAGTTGATGCTCCCGAGTTGCATCATTTGTACGATTGCCTCGTGTTTCCTCGAAATGGTGAACGGCCCCATACCAATGAAGCTTCTGGAAGTGATTTGGATGGGGATCTCTACTTCACTACTTGGGATGGAAATCTTATTCCACCTAGTAAAAAAAGTTGGCCACCTATGGAGTATGCTCCAGCGGAAGTAAAGACTCTTCAACGTAAAATTACTCGATGGGTATTGTCCTCCAATTCAACTTTTTTTACCCTATGGTTGTTCTTCATTACCTGCATGCATTATTCTTTAATTCTTCCTGGACTCTTAAATAACTTCTTTACATGAACTAGAATGCCTACTCTGTTTCTTTTATTATTTATTGATATTCTTTTTTCTTCATTATTTCTTCGTATTTATCTTATCTTATCATTTTATTGTATTTATCTTATCATTTTATAGGATATAATGGAGTTCTTTGCGAAAAATATGATCAATGAGAGTCTGGGGACGATATGCAATGCGCATGTTGTTCATGCTGACCGCAGCAAGCATGGAGCTTTGGATGAGAACTGTATACAATTATCTGAATTAGCTGCCACAGCTGTTGATTTCCCCAAGACAGGGAAGCTCGTGACCATGCCTCCCCATTTAAAACCAAAACTATATCCAGATTTTATGGGAAAGGAAGCTACTCAATCATACAAGTCCACCAAAATTCTAGGAAAAATGTACCGCCGAATTAGAGATGCATATGATGATGATGATATGATCACATCACGTGAGCTAAATTTTACTCCTGGCGATGTCCATTACGATGTAGACCTCGAAGTGGCAGGAGCAGAAGATTTCATTGCAGAAGCATGGGATCAAAAATGCTCATACGATGGTCAGCTGAGCGGTTTACTGGGACAATATAAAGTTAATAGGGAAGAAGAGATTGTCACTGGACATATTTGGTCCATGCCAAAGTATGTTAGTAGGAAGCAAGGAGAGCTGAAGGAGAAGCTTAAACATTCTTATAGCACTCTTAAGAAAGACTTCAGGCAAGTTTTTGAGAATCTTGGGCCAGAGTTTGAGCAACTCACTTGTGATGAAAGGAATGCACTGTATGAAAAAAAGGCATCTGCCTGGTATCAGGTGGCATACCATCCAACTTGGTTGAAGAAATCATTGGAGCTGCGAGAACCCGACGCTCCTGAGGCCGTCCCGATGTTAAGCTTTCCTTGGATTGCTGCCGATTATCTTGCACGAATCAAAATCAAATGCAGGCGGACGAAAAGTTTTGACCCAACAAAGCCGATTAACTCTTTGGCAAGTTATCTCTCTGATCGAATGTGAACATCCGAATGGCTCTCGCACTTTTGTAGCTGATTTAGATAATCTGGTTGCAAGACCACTCTGCCAGTATAGAACATGATTGTTATGTAAACTTGTTGTAGCTTGTAATGTAGCAGTAGCAGTATCGGGTTGGATTGTACTATAAATTTCGAGGTGTTCCTTGAAACAATATTGTCATTTATATTTCTGAAGATTCAAAATGTTTGTATTAAAGGG

mRNA sequence

ATGGGGTCAGAAGAAGGTGAAAAGATAGTGGTAACTCAAGTCAGCTTTGGCGGATTTGACAGTGATGTTAAAGCTAGAGATCTTATGAGTTATCTGGAATCTGAGATTGGGCTTGTGGACAGATGTAGATTGAAAACTTCATGGACTCCTCCAGAATCGTACCCAGATTTTGAAGTCAGCAATGTTGCTAATGTTATAAAATCTGATGATTACAAGAAGGTGGTGCCTCATGCATTTGTACATTTTGTCTCACCTGACTCTGCTGCTGAGGCTCTACATGCTGCAGGTCGTGGTGAGCTTATTTTTAATGATAAATTGTTGAAGGCGAGTTTGGGGCCTGAGAGTCCTTTTCATATAAATCAGAGGCGAAGGACTAAGGTTCCCTTTAAGTTATCTGATGTGCAAGTTGATATAGGGAACTTAACTTGTCATGATGGGTTTTCAGTTGCTTGGAGAGGGCCTTCGAGTGGAATGGATTTTCTAGTGGATCCCTTTGATGGAACCTGTAAATTTTGTTTCACGAAGGATACTGCATTCTCTTTTAAAGATAACAACAAGCATACATTTTTGAAGTGTGATTACAAAATGGAGTTCATAGTGAGGGACATTAATCAGATCACAAGATATACGGATACTTCATGTTATGTTATTCTCTTGCAGCTTACAGCATCACCCTGCATTTGGTATAGAACAGCAGATGATGATATTGCCAAATTAGTTCCATATGATTTGTTGGACGATGATGATCCATGGATCCGGACAACAGATTTCACGATTAGTGGAGCTATTGGTCGTTGTAATACTTTCAGAGTTTCAGTCCCACCCCGCTATGGCATCAAGCTGAATAATGCCATGAATTATTTAAAAGAACAAAGAGTGCACCAGGTCTCCCTCAACCGGCCTCCCAAGATCCTGAATGAACCAGATTATGGTGTGCAAATGACTGATCACTTCTTTTGCATCCTTTATAAAAAAGACATATCCTTTGAGATATTATTTCTGGTAAATGCCGTAATGCACAAAGGGATAATCAACCAGCACCAAATGTCTGATAGATTTTTTGATTTGCTAAGAAACCAGCCCAATGAAGTTAATTTGGCTGCTTTAAGTCATATTCATGCTTTTAGACGTCCTGTATTGGATGCCTGTAAGAAGCTAAAACTTGTACAAGAATGGTTGTTGAAGAACCCTACACTTTTGAAAAGATCTAAAGAGCTGGTAGATATTGTTGAAATCAGGAGACTAGTAATAACTCCTTCAAAAGCATATTGCTTTCCACCTGAAGTTGAACTGTCCAATAGGGTTTTGAGAAGATACAAGGATGTTGCCGATAGGTTCCTCAGGGTTACCTTCATGGATGAAGGCATGAAGAAAATCAATTCACACGTTTATACCTATTATGTTGCCCCTATAGTAAAGGAAATTACTTCAAGCTCCTTTCCCCAGAAGACTAAAATATTTGCAAGGATGAAACATATTCTGAAACATGGATTTCACTTGTGTGGTAGGAAATACTCCTTTTTGGCGTATTCATCCAACCAACTGAGGGACCAATCAGCTTGGTTTTTTGCTGAATGCAAAAGTATAAGTGTTGATGCTATTTTGGGTTGGATGGGAAAATTTACCAATAAAAATGTTGCAAAGTGTGCTGCTAGAATTGGTCAGTGCTTTTCATCTACTTATGCAACAATTGAAGTTCCAAGAAACATGGTCAATCATGATCTTTCTGATGTTGAGAGGAATGGATATGTTTTCTCTGATGGGATTGGAACCATTACTCCTGATCTTGCGCAGGAAGTTGCAGACAAACTAAAAATGGATGGGAGCCCGCCCTGCGCTTACCAAATTAGATATGCAGGTTACAAAGGTGTTGTTGCCACTTGGCCATCCAAGAAGGACGGAATCAGACTTGCTTTAAGGCCAAGCATGAATAAATTTGAATCAAATCATAGAATCTTGGAGATCTGTTCATGGACTAGATTTCAGCCAGGTTTTCTTAATAGGCAGATTATAACCCTCCTTTCTACACTAAGTGTCCCTGATGAAATTTTCTGGAGTATGCAGGAGACTATGATTTCAAAACTGGATAGAATGATCACCGATACAGATGTGGCGTTTGAAGTTCTCACTGCATCCTGTGCCGAGCAAGGAAATGCAGCGGCAATTATGTTGAGTGCTGGTTTTGAACCTCGAACCGAACCTCATCTAAGGGGCATGCTAATGTGTATAAGAGCAGCACAGCTGTGGGGCCTTCGGGAAAAAGCAAGGATTTTTGTTACTGAGGGGAGGTGGTGTATGGGGTGTTTCGACGAGAGCGGCGTGTTACAAGAAGGTCAATGCTTCATCCAAGTATCCACTCCATTGCTTGAGAAGTGTTTCTCCAAGCATGGGTCTCTCTTTGCTGAGACAAAGAACAATCTTACTGTAGTAAGAGGGACTGTAGTCATAGCCAAAAATCCGTGCCTTCATCCAGGAGATGTGAGAATTCTTGAAGCAGTTGATGCTCCCGAGTTGCATCATTTGTACGATTGCCTCGTGTTTCCTCGAAATGGTGAACGGCCCCATACCAATGAAGCTTCTGGAAGTGATTTGGATGGGGATCTCTACTTCACTACTTGGGATGGAAATCTTATTCCACCTAGTAAAAAAAGTTGGCCACCTATGGAGTATGCTCCAGCGGAAGTAAAGACTCTTCAACGTAAAATTACTCGATGGGATATAATGGAGTTCTTTGCGAAAAATATGATCAATGAGAGTCTGGGGACGATATGCAATGCGCATGTTGTTCATGCTGACCGCAGCAAGCATGGAGCTTTGGATGAGAACTGTATACAATTATCTGAATTAGCTGCCACAGCTGTTGATTTCCCCAAGACAGGGAAGCTCGTGACCATGCCTCCCCATTTAAAACCAAAACTATATCCAGATTTTATGGGAAAGGAAGCTACTCAATCATACAAGTCCACCAAAATTCTAGGAAAAATGTACCGCCGAATTAGAGATGCATATGATGATGATGATATGATCACATCACGTGAGCTAAATTTTACTCCTGGCGATGTCCATTACGATGTAGACCTCGAAGTGGCAGGAGCAGAAGATTTCATTGCAGAAGCATGGGATCAAAAATGCTCATACGATGGTCAGCTGAGCGGTTTACTGGGACAATATAAAGTTAATAGGGAAGAAGAGATTGTCACTGGACATATTTGGTCCATGCCAAAGTATGTTAGTAGGAAGCAAGGAGAGCTGAAGGAGAAGCTTAAACATTCTTATAGCACTCTTAAGAAAGACTTCAGGCAAGTTTTTGAGAATCTTGGGCCAGAGTTTGAGCAACTCACTTGTGATGAAAGGAATGCACTGTATGAAAAAAAGGCATCTGCCTGGTATCAGGTGGCATACCATCCAACTTGGTTGAAGAAATCATTGGAGCTGCGAGAACCCGACGCTCCTGAGGCCGTCCCGATGTTAAGCTTTCCTTGGATTGCTGCCGATTATCTTGCACGAATCAAAATCAAATGCAGGCGGACGAAAAGTTTTGACCCAACAAAGCCGATTAACTCTTTGGCAAGTTATCTCTCTGATCGAATGTGA

Coding sequence (CDS)

ATGGGGTCAGAAGAAGGTGAAAAGATAGTGGTAACTCAAGTCAGCTTTGGCGGATTTGACAGTGATGTTAAAGCTAGAGATCTTATGAGTTATCTGGAATCTGAGATTGGGCTTGTGGACAGATGTAGATTGAAAACTTCATGGACTCCTCCAGAATCGTACCCAGATTTTGAAGTCAGCAATGTTGCTAATGTTATAAAATCTGATGATTACAAGAAGGTGGTGCCTCATGCATTTGTACATTTTGTCTCACCTGACTCTGCTGCTGAGGCTCTACATGCTGCAGGTCGTGGTGAGCTTATTTTTAATGATAAATTGTTGAAGGCGAGTTTGGGGCCTGAGAGTCCTTTTCATATAAATCAGAGGCGAAGGACTAAGGTTCCCTTTAAGTTATCTGATGTGCAAGTTGATATAGGGAACTTAACTTGTCATGATGGGTTTTCAGTTGCTTGGAGAGGGCCTTCGAGTGGAATGGATTTTCTAGTGGATCCCTTTGATGGAACCTGTAAATTTTGTTTCACGAAGGATACTGCATTCTCTTTTAAAGATAACAACAAGCATACATTTTTGAAGTGTGATTACAAAATGGAGTTCATAGTGAGGGACATTAATCAGATCACAAGATATACGGATACTTCATGTTATGTTATTCTCTTGCAGCTTACAGCATCACCCTGCATTTGGTATAGAACAGCAGATGATGATATTGCCAAATTAGTTCCATATGATTTGTTGGACGATGATGATCCATGGATCCGGACAACAGATTTCACGATTAGTGGAGCTATTGGTCGTTGTAATACTTTCAGAGTTTCAGTCCCACCCCGCTATGGCATCAAGCTGAATAATGCCATGAATTATTTAAAAGAACAAAGAGTGCACCAGGTCTCCCTCAACCGGCCTCCCAAGATCCTGAATGAACCAGATTATGGTGTGCAAATGACTGATCACTTCTTTTGCATCCTTTATAAAAAAGACATATCCTTTGAGATATTATTTCTGGTAAATGCCGTAATGCACAAAGGGATAATCAACCAGCACCAAATGTCTGATAGATTTTTTGATTTGCTAAGAAACCAGCCCAATGAAGTTAATTTGGCTGCTTTAAGTCATATTCATGCTTTTAGACGTCCTGTATTGGATGCCTGTAAGAAGCTAAAACTTGTACAAGAATGGTTGTTGAAGAACCCTACACTTTTGAAAAGATCTAAAGAGCTGGTAGATATTGTTGAAATCAGGAGACTAGTAATAACTCCTTCAAAAGCATATTGCTTTCCACCTGAAGTTGAACTGTCCAATAGGGTTTTGAGAAGATACAAGGATGTTGCCGATAGGTTCCTCAGGGTTACCTTCATGGATGAAGGCATGAAGAAAATCAATTCACACGTTTATACCTATTATGTTGCCCCTATAGTAAAGGAAATTACTTCAAGCTCCTTTCCCCAGAAGACTAAAATATTTGCAAGGATGAAACATATTCTGAAACATGGATTTCACTTGTGTGGTAGGAAATACTCCTTTTTGGCGTATTCATCCAACCAACTGAGGGACCAATCAGCTTGGTTTTTTGCTGAATGCAAAAGTATAAGTGTTGATGCTATTTTGGGTTGGATGGGAAAATTTACCAATAAAAATGTTGCAAAGTGTGCTGCTAGAATTGGTCAGTGCTTTTCATCTACTTATGCAACAATTGAAGTTCCAAGAAACATGGTCAATCATGATCTTTCTGATGTTGAGAGGAATGGATATGTTTTCTCTGATGGGATTGGAACCATTACTCCTGATCTTGCGCAGGAAGTTGCAGACAAACTAAAAATGGATGGGAGCCCGCCCTGCGCTTACCAAATTAGATATGCAGGTTACAAAGGTGTTGTTGCCACTTGGCCATCCAAGAAGGACGGAATCAGACTTGCTTTAAGGCCAAGCATGAATAAATTTGAATCAAATCATAGAATCTTGGAGATCTGTTCATGGACTAGATTTCAGCCAGGTTTTCTTAATAGGCAGATTATAACCCTCCTTTCTACACTAAGTGTCCCTGATGAAATTTTCTGGAGTATGCAGGAGACTATGATTTCAAAACTGGATAGAATGATCACCGATACAGATGTGGCGTTTGAAGTTCTCACTGCATCCTGTGCCGAGCAAGGAAATGCAGCGGCAATTATGTTGAGTGCTGGTTTTGAACCTCGAACCGAACCTCATCTAAGGGGCATGCTAATGTGTATAAGAGCAGCACAGCTGTGGGGCCTTCGGGAAAAAGCAAGGATTTTTGTTACTGAGGGGAGGTGGTGTATGGGGTGTTTCGACGAGAGCGGCGTGTTACAAGAAGGTCAATGCTTCATCCAAGTATCCACTCCATTGCTTGAGAAGTGTTTCTCCAAGCATGGGTCTCTCTTTGCTGAGACAAAGAACAATCTTACTGTAGTAAGAGGGACTGTAGTCATAGCCAAAAATCCGTGCCTTCATCCAGGAGATGTGAGAATTCTTGAAGCAGTTGATGCTCCCGAGTTGCATCATTTGTACGATTGCCTCGTGTTTCCTCGAAATGGTGAACGGCCCCATACCAATGAAGCTTCTGGAAGTGATTTGGATGGGGATCTCTACTTCACTACTTGGGATGGAAATCTTATTCCACCTAGTAAAAAAAGTTGGCCACCTATGGAGTATGCTCCAGCGGAAGTAAAGACTCTTCAACGTAAAATTACTCGATGGGATATAATGGAGTTCTTTGCGAAAAATATGATCAATGAGAGTCTGGGGACGATATGCAATGCGCATGTTGTTCATGCTGACCGCAGCAAGCATGGAGCTTTGGATGAGAACTGTATACAATTATCTGAATTAGCTGCCACAGCTGTTGATTTCCCCAAGACAGGGAAGCTCGTGACCATGCCTCCCCATTTAAAACCAAAACTATATCCAGATTTTATGGGAAAGGAAGCTACTCAATCATACAAGTCCACCAAAATTCTAGGAAAAATGTACCGCCGAATTAGAGATGCATATGATGATGATGATATGATCACATCACGTGAGCTAAATTTTACTCCTGGCGATGTCCATTACGATGTAGACCTCGAAGTGGCAGGAGCAGAAGATTTCATTGCAGAAGCATGGGATCAAAAATGCTCATACGATGGTCAGCTGAGCGGTTTACTGGGACAATATAAAGTTAATAGGGAAGAAGAGATTGTCACTGGACATATTTGGTCCATGCCAAAGTATGTTAGTAGGAAGCAAGGAGAGCTGAAGGAGAAGCTTAAACATTCTTATAGCACTCTTAAGAAAGACTTCAGGCAAGTTTTTGAGAATCTTGGGCCAGAGTTTGAGCAACTCACTTGTGATGAAAGGAATGCACTGTATGAAAAAAAGGCATCTGCCTGGTATCAGGTGGCATACCATCCAACTTGGTTGAAGAAATCATTGGAGCTGCGAGAACCCGACGCTCCTGAGGCCGTCCCGATGTTAAGCTTTCCTTGGATTGCTGCCGATTATCTTGCACGAATCAAAATCAAATGCAGGCGGACGAAAAGTTTTGACCCAACAAAGCCGATTAACTCTTTGGCAAGTTATCTCTCTGATCGAATGTGA

Protein sequence

MGSEEGEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVSNVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHINQRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFSFKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKLVPYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNRPPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQPNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPSKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSFPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGKFTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEVADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTRFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAAAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQCFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHHLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQRKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLKKSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM*

Homology

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BLAST of Csa2G381730.1 vs. Swiss-Prot
Match: RDR6_ARATH (RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana GN=RDR6 PE=1 SV=1)

HSP 1 Score: 1642.9 bits (4253), Expect = 0.0e+00
Identity = 791/1199 (65.97%), Postives = 954/1199 (79.57%), Query Frame = 1


Query: 1    MGSEEG-EKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEV 60
            MGSE   +K VVTQVS GGF     A+ L  YLE E+G+V RCRLKTSWTPP SYP+FE+
Sbjct: 1    MGSEGNMKKSVVTQVSIGGFGESTTAKQLTDYLEDEVGIVWRCRLKTSWTPPGSYPNFEI 60

Query: 61   SNVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHI 120
            ++ +N+   D+YKKV PHAFVHF   +SA  A+ AAG+  LI + + LK SLGP++P+ +
Sbjct: 61   ADTSNIPSIDEYKKVEPHAFVHFAVFESAGRAMDAAGQCNLILDGQPLKVSLGPKNPYSL 120

Query: 121  NQRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAF 180
            NQRRRT VP+KL+ + ++IG L   D F V+WR  + G+DFLVDPFD TCKFCF K TAF
Sbjct: 121  NQRRRTTVPYKLAGITLEIGTLVSRDDFFVSWR--AEGVDFLVDPFDNTCKFCFRKSTAF 180

Query: 181  SFKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKL 240
            SFKD   H  + CDYK+E +VRDI  + +Y     +V++LQL +SP +WYRTADDDI   
Sbjct: 181  SFKDAVMHAVINCDYKLELLVRDIQTVRQYKTLHGFVLILQLASSPRVWYRTADDDIYDT 240

Query: 241  VPYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLN 300
            VP DLLDDDDPWIRTTDFT  GAIGRC+++RV + PRY  KL  A++Y + +RV +  + 
Sbjct: 241  VPGDLLDDDDPWIRTTDFTQVGAIGRCHSYRVLISPRYENKLRTALDYFRMRRVQEERVR 300

Query: 301  RPPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRN 360
             PP+I NEP +G  ++DHFFCI +K+ ISFEI+FLVN+V+H+G+ NQ Q+++RFFDLLRN
Sbjct: 301  WPPRIRNEPCFGEPVSDHFFCIHHKEGISFEIMFLVNSVLHRGVFNQFQLTERFFDLLRN 360

Query: 361  QPNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITP 420
            QP +VN+A+L H+  ++RPV DA K+LKLVQEW+ KNP LL   ++  DI EIRRLVITP
Sbjct: 361  QPKDVNIASLKHLCTYKRPVFDAYKRLKLVQEWIQKNPKLLGSHEQSEDISEIRRLVITP 420

Query: 421  SKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSS 480
            ++AYC PPEVELSNRVLRRYK VA+RFLRVTFMDE M+ INS+V +Y+VAPIVK++TSSS
Sbjct: 421  TRAYCLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVAPIVKDLTSSS 480

Query: 481  FPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMG 540
            F QKT +F R+K IL  GF LCGRKYSFLA+S+NQLRD+SAWFFAE     V  I  WMG
Sbjct: 481  FSQKTYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKTRVSDIKTWMG 540

Query: 541  KFTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQE 600
            KF +KNVAKCAAR+G CFSSTYAT++V  + V+ ++ D+ERNGYVFSDGIGTITPDLA E
Sbjct: 541  KFKDKNVAKCAARMGLCFSSTYATVDVMPHEVDTEVPDIERNGYVFSDGIGTITPDLADE 600

Query: 601  VADKLKMDGS-PPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSW 660
            V +KLK+D    PCAYQIRYAG+KGVVA WPSK DGIRLALR SM KF S H ILEICSW
Sbjct: 601  VMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSMKKFFSKHTILEICSW 660

Query: 661  TRFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGN 720
            TRFQPGFLNRQIITLLS L VPDEIFW MQE+M+ KL+R++ DTDVAFEVLTASCAEQGN
Sbjct: 661  TRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAFEVLTASCAEQGN 720

Query: 721  AAAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEG 780
             AAIMLSAGF+P+TEPHLRGML  +R AQLWGLREK+RIFVT GRW MGC DE+G+L+ G
Sbjct: 721  TAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWLMGCLDEAGILEHG 780

Query: 781  QCFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPEL 840
            QCFIQVS P +E CFSKHGS F ETK +L VV+G V IAKNPCLHPGDVRILEAVD P+L
Sbjct: 781  QCFIQVSKPSIENCFSKHGSRFKETKTDLEVVKGYVAIAKNPCLHPGDVRILEAVDVPQL 840

Query: 841  HHLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTL 900
            HH+YDCL+FP+ G+RPHTNEASGSDLDGDLYF  WD  LIPP++KS+P M Y  AE K+L
Sbjct: 841  HHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPNRKSYPAMHYDAAEEKSL 900

Query: 901  QRKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPK 960
             R +   DI++FFA+N+ NE LGTICNAHVVHADRS++GA+DE C+ L+ELAATAVDFPK
Sbjct: 901  GRAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECLLLAELAATAVDFPK 960

Query: 961  TGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTP 1020
            TGK+V+MP HLKPKLYPDFMGKE  Q+YKS KILG++YRR+++ YD+D   +S E +  P
Sbjct: 961  TGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRRVKEVYDEDAEASSEE-STDP 1020

Query: 1021 GDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVS 1080
              + YD  LE+ G ED I EAW  KC YDGQL GLLGQYKV +EEEIVTGHIWSMPKY S
Sbjct: 1021 SAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYTS 1080

Query: 1081 RKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTW 1140
            +KQGELKE+LKHSY++LKK+FR+VFE   P+ E L+ +E+N LYEKKASAWY V YHP W
Sbjct: 1081 KKQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKASAWYHVTYHPEW 1140

Query: 1141 LKKSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1198
            +KKSLEL++PD      MLSF WIAADYLARIKI+ R   S D  KP++SLA +L+ R+
Sbjct: 1141 VKKSLELQDPDESSHAAMLSFAWIAADYLARIKIRSREMGSIDSAKPVDSLAKFLAQRL 1196

[Close]

BLAST of Csa2G381730.1 vs. Swiss-Prot
Match: SHL2_ORYSJ (Probable RNA-dependent RNA polymerase SHL2 OS=Oryza sativa subsp. japonica GN=SHL2 PE=2 SV=1)

HSP 1 Score: 1397.1 bits (3615), Expect = 0.0e+00
Identity = 689/1200 (57.42%), Postives = 875/1200 (72.92%), Query Frame = 1


Query: 9    IVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEV----SNVAN 68
            +V TQVS GGFD+ V A DL  +LE E+GLV RCR+KTSWTPP+SYPDF +    ++ + 
Sbjct: 27   LVTTQVSLGGFDAGVAAGDLADFLEHEVGLVWRCRVKTSWTPPDSYPDFALPTAPASASA 86

Query: 69   VIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHINQRRR 128
                  Y +V PHAFVHF  P+ A  A   AG   LI   K L+ +  P+S   ++ RR 
Sbjct: 87   AAAPPRYDRVPPHAFVHFARPEGARRAADLAGETRLILRGKPLRVASAPDSSLRVS-RRS 146

Query: 129  TKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFSFKDN 188
            +  PF+  DV++++G L     F  AWRGP +G+D  VDPFDG C+  FT+DTAF+F   
Sbjct: 147  SIAPFRFPDVRLEVGALPSPGAFLAAWRGPDAGLDLSVDPFDGCCRLVFTRDTAFTFPGF 206

Query: 189  NKHTFLKCDYKMEFIVRDINQITRYT-DTSCYVILLQLTASPCIWYRTADDDIAKLVPYD 248
             +   ++CD K+EF VRD+ ++  Y  D S   +LL+L A+P + YRTADDD  + VP+D
Sbjct: 207  REVAAIRCDVKLEFPVRDVLEVRLYRLDCS---LLLRLAAAPLVHYRTADDDFHEPVPFD 266

Query: 249  LLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLN---- 308
            LLDDDDPWIRTTD T SGAIGRC  +R+S   R+  K++ A++Y++E+RV  V       
Sbjct: 267  LLDDDDPWIRTTDITPSGAIGRCGVYRISFSARFWPKMDRALDYMRERRVAIVDCGGGWG 326

Query: 309  --RPPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLL 368
              R   + +E ++G  M D FFC+ + + + F +LF+VNA++HKGIINQHQ++  FF LL
Sbjct: 327  PRRGLTVRDELEFGEPMQDVFFCLQHAEGLKFPLLFMVNALVHKGIINQHQLTPEFFSLL 386

Query: 369  RNQPNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVI 428
                  VN+AAL      + PV DAC +LK     + +NP LL  SK   D  E+RRLVI
Sbjct: 387  GRSEENVNVAALRDFWGDKFPVFDACGRLKKALNRVARNPKLLC-SKVGDDHAEVRRLVI 446

Query: 429  TPSKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITS 488
            TP++AYC PPEVE SNRVLR Y +VADRFLRVTFMDEGM+ +N++V   + APIVK++ S
Sbjct: 447  TPTRAYCLPPEVERSNRVLRHYHEVADRFLRVTFMDEGMQVLNNNVLNSFTAPIVKDLMS 506

Query: 489  SSFPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGW 548
            + F QKT ++ R++ +L  GFH+CGRKYSFLA+SSNQLRD+SAWFFAE +  +V+AI  W
Sbjct: 507  NFFQQKTTVYKRVRMLLTEGFHMCGRKYSFLAFSSNQLRDKSAWFFAEDRKTTVEAIRKW 566

Query: 549  MGKFTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLA 608
            MG+FT+KNVAK AAR+GQCFSSTYAT+ +  + V+    DV  N Y+FSDGIG ITPDLA
Sbjct: 567  MGRFTSKNVAKHAARMGQCFSSTYATVTMRPDEVDESFDDVVHNEYIFSDGIGKITPDLA 626

Query: 609  QEVADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICS 668
             EVA++L++  +PP AYQIR+AG+KGV+A W    DG RL LRPSM KFESNH +LE+ S
Sbjct: 627  LEVAERLQLTDNPPSAYQIRFAGFKGVIAVWQGHGDGTRLFLRPSMRKFESNHLVLEVVS 686

Query: 669  WTRFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQG 728
            WT+FQPGFLNRQII LLS+L+VPD IFW MQETM+S L+ +++D DVAFEVLT SCA+ G
Sbjct: 687  WTKFQPGFLNRQIIILLSSLNVPDSIFWQMQETMLSNLNNILSDRDVAFEVLTTSCADDG 746

Query: 729  NAAAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQE 788
            N AA+MLSAGFEPRTEPHL+ ML+ IR+AQL  L EKARIFV +GRW MGC DE GVL++
Sbjct: 747  NTAALMLSAGFEPRTEPHLKAMLLAIRSAQLQDLLEKARIFVPKGRWLMGCLDELGVLEQ 806

Query: 789  GQCFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPE 848
            GQCFI+ + P L   F KHGS F+ T  N  V+ GTVVIAKNPCLHPGDVRILEAVD PE
Sbjct: 807  GQCFIRATVPSLNSYFVKHGSRFSSTDKNTEVILGTVVIAKNPCLHPGDVRILEAVDVPE 866

Query: 849  LHHLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKT 908
            LHHL DCLVFP+ GERPH NEASGSDLDGDLYF TWD  LIPP KKSW PM+Y+P E K 
Sbjct: 867  LHHLVDCLVFPQKGERPHANEASGSDLDGDLYFVTWDEKLIPPGKKSWNPMDYSPPEAKQ 926

Query: 909  LQRKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFP 968
            L R++++ DI++FF KNMI+E+LG ICNAHVVHAD S++GA+DE CI L+ELAATAVDFP
Sbjct: 927  LPRQVSQHDIIDFFLKNMISENLGRICNAHVVHADLSEYGAMDEKCIHLAELAATAVDFP 986

Query: 969  KTGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFT 1028
            KTGKL  MPPHLKPK+YPDFMGKE  QSYKS KILG++YR I++A + D  + S+E+  T
Sbjct: 987  KTGKLAIMPPHLKPKVYPDFMGKEDGQSYKSEKILGRLYRSIQEASNGD--VVSQEV-CT 1046

Query: 1029 PGDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYV 1088
            P D+ YD+DLEV GA DF+A AW  KCSYD QLS LL QY+V  E E+VTGHI  + K  
Sbjct: 1047 PNDLPYDIDLEVPGASDFLASAWQCKCSYDAQLSALLSQYRVRTEAELVTGHITFLVKNS 1106

Query: 1089 SRKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPT 1148
            S+KQG++K++LK +YS L+K+F+  FE++  +  ++  DE+N LYE KASAWYQV YHP 
Sbjct: 1107 SKKQGDIKDRLKTAYSALRKEFKSTFESIASDQCEIGDDEKNLLYEMKASAWYQVTYHPK 1166

Query: 1149 WLKKSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1198
            W++KS  +  PD  E    LSF WI  DYLARIK++C      +  KP+  LA+Y+S+R+
Sbjct: 1167 WVEKSRGILGPDGEEIPASLSFAWIPVDYLARIKLRCHGKVRVEGQKPVERLAAYISERI 1218

[Close]

BLAST of Csa2G381730.1 vs. Swiss-Prot
Match: RDR1_ARATH (RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana GN=RDR1 PE=2 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 7.8e-158
Identity = 355/1000 (35.50%), Postives = 537/1000 (53.70%), Query Frame = 1


Query: 193  DYKMEFIVRDINQITRYTDT--SCYVILLQLTASPCIWYRTADDDIAKLVPYDLLD---- 252
            DY++E    +I QI  ++    S   +++Q+  +P I+ +  +D    L+ + ++D    
Sbjct: 143  DYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAPKIFEK--EDQPINLL-FGIMDFYSD 202

Query: 253  -DDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIK--LNNAMNYLKEQRVHQVSLNRPPK 312
              D+ WIRTTDFT S  IG+   F + +P    +     N  NY  E R     +     
Sbjct: 203  GSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNVPDFRENFANYA-EHRASSFLIESGSS 262

Query: 313  ILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQPNE 372
              +  +  V + D          + FEILF +N ++    ++   +   F+ LL  +  +
Sbjct: 263  YSSNANTLVPVVDPPPGF----SLPFEILFKLNTLVQNACLSGPALDLDFYRLLNQK--K 322

Query: 373  VNLAALSHIHAFRRPVLDACKK-----LKLVQEWLLKNPTLLKRSKELVD-IVEIRRLVI 432
             + A + H       + + C +         ++W+ K    L  +  L D +V + R+ +
Sbjct: 323  YDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGKLPLSPTISLDDGLVYMYRVQV 382

Query: 433  TPSKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITS 492
            TP++ Y   PEV +SNRVLR Y    + FLRV+F+DE ++K+ S   +            
Sbjct: 383  TPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVRSMDLS----------PR 442

Query: 493  SSFPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGW 552
            SS  ++TK++ R+  +L+ G  +  +K+ FLA+SS+QLR+ SAW FA    I+   I  W
Sbjct: 443  SSTQRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDRITAAHIRAW 502

Query: 553  MGKFTN-KNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVE----RNGYVFSDGIGTI 612
            MG F + +NVAK AAR+GQ FSS+  T+ V  + +   + DVE       YVFSDGIG I
Sbjct: 503  MGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEV-IPDVEIISLGTRYVFSDGIGKI 562

Query: 613  TPDLAQEVADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRI 672
            + + A++VA K  +    P A+QIRY GYKGVVA  P+     +L+LR SM+KFES +  
Sbjct: 563  SAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSK--KLSLRKSMSKFESENTK 622

Query: 673  LEICSWTRFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTAS 732
            L++ +W+++QP ++NRQ+ITLLSTL V D +F   Q  ++ +LD ++T    A E L   
Sbjct: 623  LDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPLEAHEALGLM 682

Query: 733  C-AEQGNAAAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDE 792
               E  N    ++  G++P  EP L  ML   RA++L  LR K RIF++ GR  MGC DE
Sbjct: 683  APGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGGRSMMGCLDE 742

Query: 793  SGVLQEGQCFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILE 852
            +  L+ GQ  +Q S P+      + G  F        ++ G VV+AKNPCLHPGDVR+L+
Sbjct: 743  TRTLEYGQVVVQYSDPM------RPGRRF--------IITGPVVVAKNPCLHPGDVRVLQ 802

Query: 853  AVDAPELHHLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYA 912
            AV+ P L+H+ DC+VFP+ G RPH NE SGSDLDGD+YF  WD  L+PP  ++  PM+Y 
Sbjct: 803  AVNVPALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPP--RTSEPMDYT 862

Query: 913  PAEVKTLQRKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAA 972
            P   + L   +T  ++ E+FA  ++N+SLG I NAH   AD+    A  + CI+L++  +
Sbjct: 863  PEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELAKKFS 922

Query: 973  TAVDFPKTGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITS 1032
            TAVDFPKTG    +P HL  K YPDFM K    +Y+S  ++GK++R +++      +I+ 
Sbjct: 923  TAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKER--APPLISI 982

Query: 1033 RELNFTPGDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIW 1092
            +          YD D+EV G E+++ EA+ QK +YD +L  L+  Y +  E EI++G I 
Sbjct: 983  KSFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGGIM 1042

Query: 1093 SMPKYVSRKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQ 1152
             M K  ++++    E +  +   L+K+   +F             E       KASAWY 
Sbjct: 1043 RMSKSFTKRRD--AESIGRAVRALRKETLSLF----------NASEEEENESAKASAWYH 1084

Query: 1153 VAYHPTWLKKSLELREPDAPEAVPMLSFPWIAADYLARIK 1172
            V YH ++     E    D       LSF W   D L RIK
Sbjct: 1103 VTYHSSYWGLYNEGLNRD-----HFLSFAWCVYDKLVRIK 1084

[Close]

BLAST of Csa2G381730.1 vs. Swiss-Prot
Match: RDR2_ORYSJ (Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica GN=RDR2 PE=2 SV=1)

HSP 1 Score: 547.7 bits (1410), Expect = 3.1e-154
Identity = 366/1021 (35.85%), Postives = 537/1021 (52.60%), Query Frame = 1


Query: 194  YKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKLVPYDLL-----DDD 253
            YK+E +  D+      T      ILLQL  +P I    +   +      D       D  
Sbjct: 155  YKLEVLFEDMKDCLGCTLDGMGAILLQLNYAPRIHTAISGPAVNSRFMDDRFHACKEDAK 214

Query: 254  DPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNRPPKILNEP 313
              W+R  DFT + + GRC+T          +KL  +       +    S N     +N  
Sbjct: 215  FSWVRALDFTPNYSFGRCSTLV--------LKLGKSALVSDILKSLPFSGNLGELTMNSM 274

Query: 314  DYGVQMTDHFFCILY-KKDIS--FEILFLVNAVMHKGIINQHQMSDRFFDLLRNQPNEVN 373
            D GV  + +   +++  +D S  +E+LF +N++MH G I    ++   F  L+  P +V+
Sbjct: 275  D-GVGASSNVVPLVHCPRDYSVPYEVLFRLNSLMHMGKIVAKHVNADLFKALQELPVDVS 334

Query: 374  LAALSHIHAFRRP-------VLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVIT 433
                  +H            +      +K     LL N    +  ++L+   +  R+ IT
Sbjct: 335  RRIFEKMHKLESTCYGPLQFIQQEAYSMKRSHNVLLSNEGEGEGERKLM---KCYRVNIT 394

Query: 434  PSKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSS 493
            PSK +CF PE E++N V++ +   A  F+RVTF+DE   K++S+  +  +     E    
Sbjct: 395  PSKIFCFGPEEEVTNYVVKHHSAYASDFVRVTFVDEDWSKLSSNAISARI-----EQGFF 454

Query: 494  SFPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWM 553
            S P KT ++ R+  ILK GF +  + + FLA+S++QLR  S W FA   S++   I  WM
Sbjct: 455  SKPFKTGLYYRILSILKKGFSIGPKNFEFLAFSASQLRGNSVWMFASNASLNAGGIRRWM 514

Query: 554  GKFTN-KNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVE----RNGYVFSDGIGTIT 613
            G F N ++V+KCAAR+GQ FSS+  T EV R  V   + D+E     + Y+FSDGIG I+
Sbjct: 515  GHFENIRSVSKCAARMGQLFSSSRQTFEVLRWDVEV-IPDIEITTDGSKYIFSDGIGKIS 574

Query: 614  PDLAQEVADKLKMDGSP-PCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRI 673
               A+ VA  + +D +  P A+QIRY GYKGV+A  P     I L+LRPSM KFES  R+
Sbjct: 575  LRFAKRVAHHVGLDPTNLPSAFQIRYGGYKGVIAIDPMSS--IDLSLRPSMKKFESESRM 634

Query: 674  LEICSWTRFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTAS 733
            L I SW++ QP ++NR+II+LLSTL + DEIF +MQ+  + + + M+T+ +VA  VL   
Sbjct: 635  LNITSWSKSQPCYVNREIISLLSTLGIRDEIFVAMQQDEMRETEEMLTNKEVALSVLGKL 694

Query: 734  CAEQGNAAAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDES 793
               +   A  ML  G+EP +EP+L  +L   +  +L  +R + +I V +GR  +GC DE+
Sbjct: 695  GGSETKTAVKMLLQGYEPSSEPYLSMILKAHQENRLTDIRTRCKIHVPKGRVLIGCLDET 754

Query: 794  GVLQEGQCFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEA 853
            GVL+ GQ +I+++    E+  S     + +     TVV G V I KNPCLHPGD+R+LEA
Sbjct: 755  GVLEYGQVYIRITKNSKEQKDSNQSYFYNDDGKTATVV-GKVAITKNPCLHPGDIRVLEA 814

Query: 854  VDAPELHHLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAP 913
            +  P+L  + DCLVFP+ GERPH NE SG DLDGDLYF TWD  LIP  +K   PM+Y  
Sbjct: 815  IYDPDLVGMVDCLVFPQRGERPHPNECSGGDLDGDLYFITWDDKLIP--EKVDTPMDYTA 874

Query: 914  AEVKTLQRKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAAT 973
               + +   +T  +I + F   MIN+SLG I  AH++HADRS   A    C+QL+ L + 
Sbjct: 875  TRPRIMDHVVTLEEIQKHFVDYMINDSLGAISTAHLIHADRSPLKARSPECLQLATLHSM 934

Query: 974  AVDFPKTGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRI---RDAYDDDDMI 1033
            AVDF KTG    MP  L+P+ YPDFM +     Y S  +LGK+YR      +   D   +
Sbjct: 935  AVDFAKTGAPAEMPRTLRPREYPDFMERWEKPMYISNGVLGKLYRSAMGHMEKSGDSGAL 994

Query: 1034 TSRELNFTPGDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGH 1093
            +S     +P    YD DLEV G+++F+  A +    Y+ +L+ L+  Y+   E+EI+TG+
Sbjct: 995  SSSSAQPSP---TYDPDLEVPGSDEFLQAAEEYYELYEEKLTTLMNYYRAELEDEILTGN 1054

Query: 1094 IWSMPKYVSR---KQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKA 1153
            I +   Y+ R   +  E+K+++  +   L ++ R            L    +     + A
Sbjct: 1055 IRNKMLYLKRDNKRYFEMKDRIVAAVDALHREAR----------GWLLSSRKEEDASRMA 1114

Query: 1154 SAWYQVAYHPTWLKKSLELREPDAPEAVPMLSFPWIAADYLARIK----IKCRRTKSFDP 1184
            SAWY+V YH            PD        SFPWIA D L  IK    ++ RR K  D 
Sbjct: 1115 SAWYRVTYH------------PDRRRGKRFWSFPWIACDNLLAIKASSQLRRRRQKDDDS 1127

[Close]

BLAST of Csa2G381730.1 vs. Swiss-Prot
Match: RDR1_ORYSJ (Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica GN=RDR1 PE=2 SV=2)

HSP 1 Score: 532.7 bits (1371), Expect = 1.0e-149
Identity = 310/770 (40.26%), Postives = 449/770 (58.31%), Query Frame = 1


Query: 420  SKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSS 479
            S  Y + PE+ +SNRV+R +    + FLR++F+DE  +K+ +         +     S  
Sbjct: 7    STVYFYGPEINVSNRVVRNFSSDIENFLRISFVDEDCEKLRA-------TDLSPRSASGH 66

Query: 480  FPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMG 539
               +T ++ R+  +L  G  + G+ + FLA+SS+QLRD SAW FA  + ++   I  WMG
Sbjct: 67   DANRTALYKRVLSVLSDGITIGGKNFEFLAFSSSQLRDNSAWMFASRQGLAASDIRTWMG 126

Query: 540  KFTN-KNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNG--YVFSDGIGTITPDL 599
             F N +NVAK AAR+GQ FSS+  T++V +  V  ++SD+ +NG  +VFSDGIG I+   
Sbjct: 127  DFRNIRNVAKYAARLGQSFSSSTETLKVQKYEVE-EISDI-KNGTQHVFSDGIGKISSAF 186

Query: 600  AQEVADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEIC 659
            A EVA K  +    P A+QIRY GYKGVVA  P+ +   +L+LR SM KF+S++  +++ 
Sbjct: 187  ANEVAMKCNLKRFAPSAFQIRYGGYKGVVAVDPTSR--WKLSLRKSMLKFQSDNITVDVL 246

Query: 660  SWTRFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTAS-CAE 719
            +++++QPGFLNRQ+ITLLSTL V D +F   QE  +++L++M+TD   A E +      E
Sbjct: 247  AYSKYQPGFLNRQLITLLSTLGVRDSVFEQKQEEAVNQLNKMVTDPQAAIEAIELMPMGE 306

Query: 720  QGNAAAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVL 779
              NA   +L  G++P  EP+L  +L   RA++L  L+ K+RI + +GR  MGC DE+  L
Sbjct: 307  ITNAVKELLLCGYQPDDEPYLSMLLQTFRASKLLELKTKSRILIPKGRAMMGCLDETRTL 366

Query: 780  QEGQCFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDA 839
            + GQ FI+ ++ + +              N+   V G VVIAKNPCLHPGD+RIL AVD 
Sbjct: 367  KYGQVFIRATSGVND--------------NDRFTVTGKVVIAKNPCLHPGDIRILHAVDV 426

Query: 840  PELHHLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEV 899
            P LHH+++C+VFP+ G RPH NE SGSDLDGD+YF +WD +LIPP  +   PM+Y PA  
Sbjct: 427  PVLHHMFNCVVFPQQGPRPHPNECSGSDLDGDIYFVSWDPSLIPP--RMVTPMDYTPAPT 486

Query: 900  KTLQRKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVD 959
            +TL   +T  ++ E+F   ++NESLG I NAHVV AD+    A    CI+L++L + AVD
Sbjct: 487  ETLDHDVTIEEVEEYFTNYIVNESLGMIANAHVVFADKEDLKAESSPCIELAKLFSIAVD 546

Query: 960  FPKTGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELN 1019
            FPKTG    +PP L  K YPDFM K    +Y+S  ++GK+YR I+         T RE+ 
Sbjct: 547  FPKTGVPALIPPELHVKEYPDFMEKLDKVTYESKGVIGKLYREIKKHTPHIKHFT-REV- 606

Query: 1020 FTPGDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPK 1079
                   YD D+ V G ED+I EA   K  YD +L  L+  Y +  E EI++G I  M K
Sbjct: 607  ---ARRSYDTDMIVDGYEDYITEAMALKDEYDFKLGNLMDHYGIKSEAEIISGCILKMAK 666

Query: 1080 YVSRKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDER---NALYEKKASAWYQV 1139
              ++K     + ++ +  +L+K+ R         F +++ D+    +   E KASAWY V
Sbjct: 667  NFTKKSD--ADAIRLAVRSLRKEARS-------RFSEMSLDDNGHGHDASEAKASAWYHV 726

Query: 1140 AYHPTWLKKSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDP 1183
             YHP +     E       E    +SFPW   + L RIK + +  +   P
Sbjct: 727  TYHPEFWGCYNE-----GYERPHFISFPWCIYEKLLRIKQRRKFVRKMQP 730

[Close]

BLAST of Csa2G381730.1 vs. TrEMBL
Match: A0A067KP71_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07170 PE=4 SV=1)

HSP 1 Score: 1830.8 bits (4741), Expect = 0.0e+00
Identity = 872/1198 (72.79%), Postives = 1016/1198 (84.81%), Query Frame = 1


Query: 1    MGSEEGEK-IVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEV 60
            M +++ EK  VVTQVSFGGFD+ VKA+DL++YLE EIG V RCRLKTSWTPPESYP+FE+
Sbjct: 1    METQKSEKDTVVTQVSFGGFDNHVKAKDLVAYLEEEIGQVWRCRLKTSWTPPESYPNFEI 60

Query: 61   SNVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHI 120
            ++ A + ++ +YK+V PHAFVHF S +SA  A +AAG  EL  ND+ LK SLGPE+PFH+
Sbjct: 61   TDAAAIHRTHEYKRVEPHAFVHFASAESATWAKNAAGHCELFLNDRPLKVSLGPENPFHL 120

Query: 121  NQRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAF 180
            NQRRR  +PFKLSDV ++IG L   D F V WRGPSSG+DFLVDPFDGTCKFCFT DTAF
Sbjct: 121  NQRRRKNIPFKLSDVCIEIGTLVSRDEFLVGWRGPSSGVDFLVDPFDGTCKFCFTMDTAF 180

Query: 181  SFKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKL 240
            S KD  KH  ++CD+K+EF+VRDIN++ +YTDTSC VILLQL ++P +WYRTADDDI   
Sbjct: 181  SIKDTTKHAIIRCDFKLEFLVRDINEVKQYTDTSCIVILLQLASAPLVWYRTADDDIEVS 240

Query: 241  VPYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLN 300
            VP+DLLDDDDPWIRTTDFT SGAIGRCN +RVS+PPR+G KL  A N+LKE+RV + SL 
Sbjct: 241  VPFDLLDDDDPWIRTTDFTPSGAIGRCNFYRVSIPPRHGAKLKRARNFLKERRVQEDSLR 300

Query: 301  RPPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRN 360
            RP KI+NEPDYG+ M+D FFCI +K+ I+FEI+FLVNAVMHKGI NQHQ+SD FFDLLRN
Sbjct: 301  RPLKIVNEPDYGMPMSDPFFCIHHKEGIAFEIMFLVNAVMHKGIFNQHQLSDNFFDLLRN 360

Query: 361  QPNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITP 420
            Q  ++N+AAL HI ++++PV DA K LK VQEWLLKNP L KRSK+L DIVEIRRL +TP
Sbjct: 361  QSLDINVAALKHICSYKQPVFDAHKGLKAVQEWLLKNPKLFKRSKQLDDIVEIRRLALTP 420

Query: 421  SKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSS 480
            ++AYC PPEVELSNRVLR+YK++ADRFLRVTFMDEG++ IN++  TYYVAPIV++ITS+S
Sbjct: 421  TRAYCLPPEVELSNRVLRKYKNIADRFLRVTFMDEGLQTINANTLTYYVAPIVRDITSTS 480

Query: 481  FPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMG 540
            F QKT+IF R+K IL  GF+LCGR+YSFLA+SSNQLRD+SAWFFAE   ISV  I  WMG
Sbjct: 481  FSQKTRIFRRVKSILTDGFNLCGRRYSFLAFSSNQLRDRSAWFFAEDGKISVGQIRKWMG 540

Query: 541  KFTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQE 600
            +FTN+N+AKCAAR+GQCFSSTYAT+EVP + VNH L D+ERNGY+FSDGIGTITPDLA+E
Sbjct: 541  RFTNRNIAKCAARMGQCFSSTYATVEVPSSEVNHALPDIERNGYIFSDGIGTITPDLAKE 600

Query: 601  VADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWT 660
            VA+KLK+D + PCAYQIRYAG KGVVA WP++ DGIRL+LRPSMNKF+SNH  LEICSWT
Sbjct: 601  VAEKLKLDINLPCAYQIRYAGCKGVVACWPAQGDGIRLSLRPSMNKFQSNHTTLEICSWT 660

Query: 661  RFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNA 720
            RFQPGFLNRQIITLLSTL+V DE+FW MQ  M+SKL++M+TD DVAF+V+T SCAEQGN 
Sbjct: 661  RFQPGFLNRQIITLLSTLNVSDEVFWEMQTAMVSKLNKMLTDADVAFDVITKSCAEQGNT 720

Query: 721  AAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQ 780
            AAIMLSAGF+P+ EPHLRGML CIRAAQ WGLREKARIFVT GRW MGC DE GVL++GQ
Sbjct: 721  AAIMLSAGFKPQNEPHLRGMLTCIRAAQFWGLREKARIFVTSGRWLMGCLDELGVLEQGQ 780

Query: 781  CFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELH 840
            CFIQVS P LE CFSKHGS F+ETK NL V++GTVVIAKNPCLHPGDVRILEAVDAP LH
Sbjct: 781  CFIQVSNPCLETCFSKHGSKFSETKKNLQVIKGTVVIAKNPCLHPGDVRILEAVDAPGLH 840

Query: 841  HLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQ 900
            HL+DCLVFP+ G+RPHTNEASGSDLDGDLYF TWD NLIPPSKKSW PM+Y  AE K L 
Sbjct: 841  HLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDDNLIPPSKKSWTPMQYDAAEAKLLN 900

Query: 901  RKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKT 960
            R ++  DI++FFAKNM+NE+LG ICNAHVVHAD S+HGALDENCI+L+ELAATAVDFPKT
Sbjct: 901  RPVSHQDIIDFFAKNMVNENLGAICNAHVVHADLSEHGALDENCIKLAELAATAVDFPKT 960

Query: 961  GKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPG 1020
            GKLVTMPP+LKPK+YPDFMGKE  QSYKSTKILG++YR+I DAY DDD     ELN   G
Sbjct: 961  GKLVTMPPYLKPKMYPDFMGKEEYQSYKSTKILGRLYRQIIDAYGDDDAAAFSELNCLSG 1020

Query: 1021 DVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSR 1080
            D+ YD DLEV G+ D+I EAWDQKCSYDGQL GLLGQYKV REEE+VTGHIWSMP   SR
Sbjct: 1021 DIPYDADLEVLGSADYILEAWDQKCSYDGQLKGLLGQYKVKREEELVTGHIWSMPMSNSR 1080

Query: 1081 KQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWL 1140
            KQG+LKE+LKHSYS LKK+FRQVFE +  + EQLT DE+N  YE+KASAWYQVAYHP W+
Sbjct: 1081 KQGDLKERLKHSYSALKKEFRQVFEGMNLDVEQLTDDEKNLQYERKASAWYQVAYHPKWI 1140

Query: 1141 KKSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1198
            KKSLEL+E DAP    MLSF WIAADYLARIKIK R T+  D  KP+NSL  YL+DR+
Sbjct: 1141 KKSLELQESDAPGNATMLSFSWIAADYLARIKIKRRGTEGIDTAKPVNSLVKYLTDRI 1198

[Close]

BLAST of Csa2G381730.1 vs. TrEMBL
Match: B9RP51_RICCO (RNA-dependent RNA polymerase, putative OS=Ricinus communis GN=RCOM_0924060 PE=4 SV=1)

HSP 1 Score: 1786.5 bits (4626), Expect = 0.0e+00
Identity = 849/1196 (70.99%), Postives = 995/1196 (83.19%), Query Frame = 1


Query: 7    EKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVSNVANVI 66
            ++ VVTQVSFGGFD DV ARDL++YL++EIG V RCRLKTSWTPPESYP+FE+++ A + 
Sbjct: 8    KETVVTQVSFGGFDKDVTARDLVAYLDNEIGQVWRCRLKTSWTPPESYPNFEITDTAVIQ 67

Query: 67   KSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHINQRRRTK 126
            + D Y++V PHAFVHF SPDSA  A +AAG  EL FN + +K SLGPE+PFH+NQRRRT 
Sbjct: 68   RVDAYRRVEPHAFVHFASPDSATWAKNAAGHCELFFNGRPVKVSLGPENPFHLNQRRRTT 127

Query: 127  VPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFSFKDNNK 186
            +PFKLSDV V+IG L   D F V WRGP SG+DFLVDPFDG CKFCFT+DTAFSFK   +
Sbjct: 128  IPFKLSDVHVEIGTLVSRDEFLVGWRGPPSGVDFLVDPFDGKCKFCFTRDTAFSFKGTTE 187

Query: 187  HTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKLVPYDLLD 246
            H  ++CD+K+EF+VRDIN+I +YTDTSC VILLQL ++P +WYRTADDDI  LVP+DLLD
Sbjct: 188  HAVIRCDFKLEFLVRDINEIKQYTDTSCLVILLQLASAPSVWYRTADDDIEVLVPFDLLD 247

Query: 247  DDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNRPPKILN 306
            DDDPWIRTTDFT SGAIGRCN++RVS+PPR+G KL  A+N+L+E+RV +  L RP  +  
Sbjct: 248  DDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGAKLKRALNFLRERRVQEDCLRRPLHVTA 307

Query: 307  EPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQPNEVNL 366
            EP+Y + M+D FFCI +++ + F ++FLVNAVMHKGI NQHQ+SD FFDLLRNQP +VN+
Sbjct: 308  EPEYEMPMSDPFFCIHHEEGVDFNLMFLVNAVMHKGIFNQHQLSDSFFDLLRNQPLDVNI 367

Query: 367  AALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPSKAYCFP 426
            AAL HI +++ PV DA K+LK VQ+WLLKNP L + SK+L DIVEIRRL ITP++AYC P
Sbjct: 368  AALRHICSYKHPVFDAHKRLKAVQQWLLKNPKLFRSSKQLDDIVEIRRLAITPTRAYCLP 427

Query: 427  PEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSFPQKTKI 486
            PEVELSNRVLRRYKD+AD+FLRVTFMDEG++ +N++  TYY APIV++ITS+SF QKT+I
Sbjct: 428  PEVELSNRVLRRYKDIADQFLRVTFMDEGLQTMNANTLTYYCAPIVRDITSNSFSQKTRI 487

Query: 487  FARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGKFTNKNV 546
            F R+K IL  GF+LCGRKYSFLA+SSNQLRD+SAWFFAE    SV  I  WMGKFTN+N+
Sbjct: 488  FKRVKSILTDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDGKTSVSKIRNWMGKFTNRNI 547

Query: 547  AKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEVADKLKM 606
            AKCAAR+GQCFSSTYAT+EVP      DL D+ERN Y+FSDGIG ITPDLA+EVA+KLK+
Sbjct: 548  AKCAARMGQCFSSTYATVEVPSAEAILDLPDIERNNYIFSDGIGMITPDLAKEVAEKLKL 607

Query: 607  DGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTRFQPGFL 666
            + +PPCAYQIRYAG KGVVA WP+  DGIRL+LR SMNKF SNH  LEICSWTRFQPGFL
Sbjct: 608  EVNPPCAYQIRYAGCKGVVACWPAHIDGIRLSLRVSMNKFHSNHTTLEICSWTRFQPGFL 667

Query: 667  NRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAAAIMLSA 726
            NRQIITLLSTL VPDEIFW MQ  M+SKL++M  D DVAF+V+TASCAEQGN AAIMLSA
Sbjct: 668  NRQIITLLSTLDVPDEIFWKMQIVMVSKLNQMFMDADVAFDVVTASCAEQGNTAAIMLSA 727

Query: 727  GFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQCFIQVST 786
            GF P+TEPHL GML CIRAAQLWGLREK RIFV  GRW MGC DE GVL+ GQCFIQVS 
Sbjct: 728  GFNPKTEPHLCGMLTCIRAAQLWGLREKTRIFVPSGRWLMGCLDELGVLEHGQCFIQVSN 787

Query: 787  PLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHHLYDCLV 846
            P LE CF KHGS F+E+K  L VV+GTVV+AKNPCLHPGD+RILEAVDAPELHHL+DCLV
Sbjct: 788  PSLESCFWKHGSRFSESKKKLQVVKGTVVVAKNPCLHPGDIRILEAVDAPELHHLHDCLV 847

Query: 847  FPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQRKITRWD 906
            FP+ G+RPHTNEASGSDLDGDLYF TWD NLIPPSK+SW PM+Y  AE K L R +   D
Sbjct: 848  FPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWLPMQYDAAEAKQLNRPVNHQD 907

Query: 907  IMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTGKLVTMP 966
            I++FFAKNM+NE+LG ICNAHVVHAD S++GALDENCI+L+ELAATAVDFPKTGKLVTMP
Sbjct: 908  IIDFFAKNMVNENLGAICNAHVVHADLSEYGALDENCIKLAELAATAVDFPKTGKLVTMP 967

Query: 967  PHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAY-----DDDDMITSRELNFTPGDV 1026
            PHLKPKLYPDFMGKE  QSY S KILG++YR+++D Y     DDDD  TS ELN   GD+
Sbjct: 968  PHLKPKLYPDFMGKEDYQSYNSNKILGRLYRQVKDDYNDDDDDDDDAATSSELNLVRGDI 1027

Query: 1027 HYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRKQ 1086
             YD DLEV+G+ D+I +AWDQKCSYDGQL GLL QYKV REEE+VTGHIWSMPK  SRKQ
Sbjct: 1028 PYDKDLEVSGSSDYILDAWDQKCSYDGQLKGLLAQYKVKREEEVVTGHIWSMPKCNSRKQ 1087

Query: 1087 GELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLKK 1146
            GELKE+LK SY +LKK+FRQVFE +  +FEQLT DE+N LYE+KASAWYQVAYHP W+ K
Sbjct: 1088 GELKERLKQSYHSLKKEFRQVFEKMDSDFEQLTEDEKNLLYEQKASAWYQVAYHPKWVNK 1147

Query: 1147 SLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1198
            S+EL+EPDA     MLSF WIAADYLARIKI+CR     D +KP+NSL  YL+DR+
Sbjct: 1148 SMELQEPDAAGCASMLSFAWIAADYLARIKIRCRGFDGVDTSKPVNSLVKYLADRI 1203

[Close]

BLAST of Csa2G381730.1 vs. TrEMBL
Match: B9IKW9_POPTR (SILENCING DEFECTIVE 1 family protein OS=Populus trichocarpa GN=POPTR_0018s01670g PE=4 SV=1)

HSP 1 Score: 1783.5 bits (4618), Expect = 0.0e+00
Identity = 842/1194 (70.52%), Postives = 1008/1194 (84.42%), Query Frame = 1


Query: 7    EKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVSNVANVI 66
            ++ VVTQVS GGFD  V A+DL+ YL+  IGLV RCRLKTSWTPPESYP+FE++++  + 
Sbjct: 8    KETVVTQVSVGGFDIHVTAKDLLEYLDRAIGLVWRCRLKTSWTPPESYPNFEITDITKIE 67

Query: 67   KSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHINQRRRTK 126
            +++DY++VVPHAFVHF  P SA  A++A+GR EL  N+K LK SLGP++PF +NQRRRT 
Sbjct: 68   RTEDYRRVVPHAFVHFALPQSATLAMNASGRCELFLNNKALKVSLGPKNPFTLNQRRRTT 127

Query: 127  VPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFSFKDNNK 186
             PFKLSDV  +IGNL   D F V WRGP SG+DFLVDPFDGTCKFCF+++TAFS K  ++
Sbjct: 128  TPFKLSDVGFEIGNLVSRDEFFVGWRGPPSGVDFLVDPFDGTCKFCFSRNTAFSLKSTSE 187

Query: 187  HTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKLVPYDLLD 246
            H  +KCD+K+EF+VRDIN+I +YT+TSC V+LLQL ++P +WYRTADDDI   VP+DLLD
Sbjct: 188  HAVIKCDFKVEFLVRDINEIIQYTETSCLVLLLQLASAPWVWYRTADDDIEAWVPFDLLD 247

Query: 247  DDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVH---QVSLNRPPK 306
            DDDPWIRTTDFT SGAIGRC+++RVS+PPR+G KL  A+ YLKE+RV    + +  R  +
Sbjct: 248  DDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGSKLRKAVKYLKERRVQVLQEENHRRRIR 307

Query: 307  ILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQPNE 366
            IL+EPD+G+ M+D FFCI +K+ I+FE+LFLVNAVMHKGI NQHQ+S+ FFDLLRNQ  E
Sbjct: 308  ILDEPDFGMPMSDPFFCIHHKEGIAFEVLFLVNAVMHKGIFNQHQLSNDFFDLLRNQHTE 367

Query: 367  VNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPSKAY 426
            VN++AL HI  +RRPV +A ++LK VQEWLLKNP L K  K+L D+VEIRRLVITP+KAY
Sbjct: 368  VNVSALKHICTYRRPVFNAYRRLKAVQEWLLKNPNLFKNPKQLGDVVEIRRLVITPTKAY 427

Query: 427  CFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSFPQK 486
            C PPEVELSNRVLR+YKDVADRFLRVTFMDEG++++NS+V  YYVAPIV++ITS+SFPQK
Sbjct: 428  CLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQRMNSNVLNYYVAPIVRDITSNSFPQK 487

Query: 487  TKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGKFTN 546
            T+IF R++ IL  GF+LCGR+YSFLA+S+NQLRDQSAWFF+E ++ISV  +  WMGKFTN
Sbjct: 488  TRIFKRVRSILTEGFYLCGRRYSFLAFSANQLRDQSAWFFSEERNISVLDVKSWMGKFTN 547

Query: 547  KNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEVADK 606
            +N+AKCAAR+GQCFSSTYATIEVP   VN DL D+ERNGYVFSDGIG ITPDLA+EVA+K
Sbjct: 548  RNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIERNGYVFSDGIGIITPDLAREVAEK 607

Query: 607  LKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTRFQP 666
            LK+D  PPCAYQIRYAG KGVVA WP K DG+RL+LRPSMNKF+SNH  LEICSWTRFQP
Sbjct: 608  LKLDIDPPCAYQIRYAGCKGVVACWPGKGDGVRLSLRPSMNKFQSNHTTLEICSWTRFQP 667

Query: 667  GFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAAAIM 726
            GFLNRQIITLLSTL+VPD +FW MQETM+SKL++M  ++DVAF+VLTASCA+QGN AAIM
Sbjct: 668  GFLNRQIITLLSTLNVPDAVFWKMQETMVSKLNQMFVNSDVAFDVLTASCADQGNVAAIM 727

Query: 727  LSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQCFIQ 786
            LSAGF+P  EPHLRGML C+RAAQLW LREK RIFV  GRW MGC DE G+L++GQCFIQ
Sbjct: 728  LSAGFKPDREPHLRGMLTCVRAAQLWDLREKTRIFVPSGRWLMGCLDELGMLEQGQCFIQ 787

Query: 787  VSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHHLYD 846
            VS   LEKCF KHG+ F+E + NL V++GTVVIAKNPCLHPGDVR+LEAVD P LHHLYD
Sbjct: 788  VSNSSLEKCFMKHGAKFSEAEKNLQVIKGTVVIAKNPCLHPGDVRVLEAVDVPGLHHLYD 847

Query: 847  CLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQRKIT 906
            CLVFP+ GERPHTNEASGSDLDGDLYF TWD NLIPPSK+SW PM+Y  AE K L R + 
Sbjct: 848  CLVFPQKGERPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKLLARPVN 907

Query: 907  RWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTGKLV 966
              DI+EFFAKNM+N++LG ICNAHVVHAD S++GA D+NC+ L+ELAATAVDFPKTGK+V
Sbjct: 908  HQDIIEFFAKNMVNDNLGAICNAHVVHADLSEYGATDKNCLTLAELAATAVDFPKTGKVV 967

Query: 967  TMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGDVHY 1026
            +MPP+LKPK+YPDFMGKE  QSYKS KILG++YR+I+DAY D+D+  S ELN  PGD+ Y
Sbjct: 968  SMPPYLKPKMYPDFMGKEEYQSYKSEKILGRLYRQIKDAY-DEDVAASSELNLVPGDIPY 1027

Query: 1027 DVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRKQGE 1086
            D DLEV GA D+I++AWDQKCSYDGQL+GLL QYKV REEE+VTGHIWSMPKY SRKQGE
Sbjct: 1028 DSDLEVVGASDYISDAWDQKCSYDGQLNGLLSQYKVKREEEVVTGHIWSMPKYSSRKQGE 1087

Query: 1087 LKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLKKSL 1146
            LK++LKHSY++LKK+FRQ+FE +  EFEQL   E+N LYE+KASAWYQV YHP W+KKSL
Sbjct: 1088 LKDRLKHSYNSLKKEFRQIFEKMDLEFEQLEDGEKNKLYEQKASAWYQVVYHPHWVKKSL 1147

Query: 1147 ELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1198
            EL++PD      MLSF WIAADYLARIKI+ R T + D  KP+NSLA YL+DRM
Sbjct: 1148 ELQDPDGAGTSVMLSFAWIAADYLARIKIRHRETGNVDSAKPVNSLAKYLADRM 1200

[Close]

BLAST of Csa2G381730.1 vs. TrEMBL
Match: A0A067L2C2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03988 PE=4 SV=1)

HSP 1 Score: 1783.1 bits (4617), Expect = 0.0e+00
Identity = 857/1198 (71.54%), Postives = 1004/1198 (83.81%), Query Frame = 1


Query: 1    MGSEEGEK-IVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEV 60
            MG+E  EK  VVTQVSFGGF++ V A+DL++YLE  IG V RCRLKTSWTPPESYP+F++
Sbjct: 1    MGTERSEKDTVVTQVSFGGFENHVNAKDLVAYLEEVIGQVWRCRLKTSWTPPESYPNFKI 60

Query: 61   SNVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHI 120
            ++ A + ++++YK+V PHAFVHF   +SA  A +AAGR EL  ND+ LK SLGPE+PF +
Sbjct: 61   TDTAGIHRTNEYKRVEPHAFVHFALAESATWAKNAAGRCELFLNDRPLKVSLGPENPFTL 120

Query: 121  NQRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAF 180
            NQRRR  +P KLSDV ++IG +   D F V WRGP SG+DFLVDPFDGTCKFCFT+DTAF
Sbjct: 121  NQRRRKTIPSKLSDVCIEIGMMVSRDEFLVGWRGPPSGVDFLVDPFDGTCKFCFTRDTAF 180

Query: 181  SFKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKL 240
            S KD NKH  ++CD+K+EF+VRDIN+I +Y DTS  VILLQL ++P +WYRTADDDI  L
Sbjct: 181  SIKDTNKHAVIRCDFKLEFLVRDINEIKQYKDTSYLVILLQLASAPWVWYRTADDDIEVL 240

Query: 241  VPYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLN 300
            VP++LLDDDDPWIRTTDFT SGAIGRCN++RVS+PPR+G KL  A+NYLKE+RV   SL 
Sbjct: 241  VPFNLLDDDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGAKLERAINYLKERRVQVDSLR 300

Query: 301  RPPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRN 360
            RP KILNEPDYG+ M+D FFCI  K+ I+FEI+FLVNAVMHKGI NQHQ+SD FFDLLRN
Sbjct: 301  RPLKILNEPDYGMPMSDPFFCIHRKEGIAFEIVFLVNAVMHKGIFNQHQLSDDFFDLLRN 360

Query: 361  QPNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITP 420
            QP ++N+AAL HI +++RPV DA ++LK VQEWLLKNP L K  K+L DIV+IRRL ITP
Sbjct: 361  QPADINVAALKHICSYKRPVFDAHRRLKAVQEWLLKNPKLFKCPKQLDDIVQIRRLAITP 420

Query: 421  SKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSS 480
            ++AYC PPE+ELSNRVLR+YK+ ADRFLRVTFMDEG++ IN++  TYYVAPIV++ITS+S
Sbjct: 421  TRAYCLPPEIELSNRVLRKYKNFADRFLRVTFMDEGLQTINANTLTYYVAPIVRDITSTS 480

Query: 481  FPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMG 540
            F QKT+IF R+K IL  GF+LCGR+YSFLA+SSNQLRD+SAWFFAE   I VD I  WMG
Sbjct: 481  FSQKTRIFKRVKSILTDGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDGKIRVDQIRKWMG 540

Query: 541  KFTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQE 600
            KFTNKN+AKCAAR+GQCFSSTYAT+EVP   VN    D+ERNGY FSDGIG ITPDLA+ 
Sbjct: 541  KFTNKNIAKCAARMGQCFSSTYATVEVPSAEVNLAHPDIERNGYTFSDGIGMITPDLAKA 600

Query: 601  VADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWT 660
            VA+KLK+D +PPCAYQIRYAG KGVVA WP++ DGIRL+LRPSMNKF+SNH  LEICSWT
Sbjct: 601  VAEKLKLDINPPCAYQIRYAGCKGVVACWPAQGDGIRLSLRPSMNKFQSNHTTLEICSWT 660

Query: 661  RFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNA 720
            RFQPGFLNRQIITLLSTL+V DEIFW MQ  M+SKL++M+TD DVAF+V+TASC EQGN 
Sbjct: 661  RFQPGFLNRQIITLLSTLNVSDEIFWKMQIAMVSKLNKMLTDADVAFDVITASCTEQGNT 720

Query: 721  AAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQ 780
            AA+MLSAGF+P+ EPHLRGML CIRAAQ   LREKARIFV+ GRW MGC DE GVL++GQ
Sbjct: 721  AALMLSAGFKPQNEPHLRGMLTCIRAAQFCDLREKARIFVSSGRWLMGCLDELGVLEQGQ 780

Query: 781  CFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELH 840
            CFIQVS P LE CFSKHGS F+ETK NL V+ GTVVIAKNPCLHPGDVRILEAVDAP L 
Sbjct: 781  CFIQVSNPSLETCFSKHGSRFSETKKNLQVITGTVVIAKNPCLHPGDVRILEAVDAPGLC 840

Query: 841  HLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQ 900
            HL+DCLVFP+ G+RPHTNEASGSDLDGDLYF TWD NLIPPSK+SW PM+Y  AE K L 
Sbjct: 841  HLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKQSWTPMQYDAAEPKLLS 900

Query: 901  RKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKT 960
            R ++  DI++FFAKNM+NESLG ICNAHVV AD S++GALDENCI+L+ELAATAVDFPKT
Sbjct: 901  RPVSHQDIIDFFAKNMVNESLGAICNAHVVRADLSEYGALDENCIKLAELAATAVDFPKT 960

Query: 961  GKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPG 1020
            GKLVT+P +LKPK+YPDFMGKE  QSYKSTKILG++YR I+DAY DDD   S ELN + G
Sbjct: 961  GKLVTLPQYLKPKMYPDFMGKEEYQSYKSTKILGRLYRDIKDAYGDDDAAASSELNCSSG 1020

Query: 1021 DVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSR 1080
            D+ YD +LEV G+ D+I EAWDQKCSYDGQL GLLGQYKV +EEE+VTGHIWSMP Y SR
Sbjct: 1021 DIPYDTNLEVLGSADYILEAWDQKCSYDGQLKGLLGQYKVKKEEELVTGHIWSMPMYNSR 1080

Query: 1081 KQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWL 1140
            K GELKE+LKHSYS LKK+FRQVFE +  +FEQLT DE+N LYE+KASAWYQV YHP W+
Sbjct: 1081 KLGELKERLKHSYSALKKEFRQVFEKMDLDFEQLTDDEKNLLYERKASAWYQVTYHPKWI 1140

Query: 1141 KKSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1198
            KKSLEL+EPDA     +LSF WIAADYLARIKIK R T+  D  KP+NSL  YL+DR+
Sbjct: 1141 KKSLELQEPDAAGNATILSFAWIAADYLARIKIKHRGTEGVDTAKPVNSLVKYLADRI 1198

[Close]

BLAST of Csa2G381730.1 vs. TrEMBL
Match: M5XL37_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000422mg PE=4 SV=1)

HSP 1 Score: 1776.9 bits (4601), Expect = 0.0e+00
Identity = 853/1197 (71.26%), Postives = 1007/1197 (84.13%), Query Frame = 1


Query: 2    GSEEGEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVSN 61
            GSE G   VVTQVSFGGF    +A+DL++YLE EIGLV RCRLKTSWTPPES+P+FE+ N
Sbjct: 5    GSENGS--VVTQVSFGGFQHHARAKDLVTYLEDEIGLVYRCRLKTSWTPPESFPNFEI-N 64

Query: 62   VANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHINQ 121
             A+V ++DDY +V PHAFVHFVSPDS   A+ AAGR EL FN++ LK SLGPE+P+ +N+
Sbjct: 65   TADVKRTDDYSRVEPHAFVHFVSPDSVTFAMDAAGRCELFFNNEPLKVSLGPENPYFLNR 124

Query: 122  RRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFSF 181
            RRRTK PFKLSDV V+IG+L   D F  +WRGP  G+DF+VDPFDGTCKFCFT DTAFSF
Sbjct: 125  RRRTKTPFKLSDVHVEIGSLVRQDEFFASWRGPPYGVDFIVDPFDGTCKFCFTMDTAFSF 184

Query: 182  KDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKLVP 241
            K   KH  +KCD+K+EF+VR+I +I +YTDTS  VILL+LT+SP + YRTADDDI + VP
Sbjct: 185  KGTKKHAVIKCDFKVEFLVREIAEIKQYTDTSYLVILLRLTSSPWVSYRTADDDIDQSVP 244

Query: 242  YDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNRP 301
            +DLLDDDDPWIRTTDFT SGAIGRCN++RV +PPR+G KL  AMNYL+E+RV +V +  P
Sbjct: 245  FDLLDDDDPWIRTTDFTPSGAIGRCNSYRVLIPPRHGAKLKKAMNYLRERRVKEVCIKWP 304

Query: 302  PKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQP 361
            PKI +EPD+G+  T+ FF I Y++ ISFEI+FLVNAVMHKG +NQHQ+SD FF LLR+QP
Sbjct: 305  PKIQDEPDFGMSNTEPFFSIQYEEGISFEIMFLVNAVMHKGTVNQHQLSDSFFHLLRSQP 364

Query: 362  NEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPSK 421
             E+N+AAL H+ ++R PV DAC++LK+VQ+WLLKNP L+K  K L DI E+RRLVITP+K
Sbjct: 365  KEINVAALKHLCSYRSPVFDACERLKVVQDWLLKNPKLVKDPKRLDDIAEVRRLVITPTK 424

Query: 422  AYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSFP 481
            AYC PPEVELSNRVLR+YK+VADRFLRVTFMDEGM+KINS+V  YYVAPIVKEITS+SF 
Sbjct: 425  AYCLPPEVELSNRVLRKYKEVADRFLRVTFMDEGMQKINSNVLNYYVAPIVKEITSNSFL 484

Query: 482  QKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGKF 541
            QKT +F R + IL  GF+LCGRKY+FLA+SSNQLRD+SAWFFAEC +ISV  I  WMGKF
Sbjct: 485  QKTNVFKRFRTILNDGFYLCGRKYTFLAFSSNQLRDRSAWFFAECVNISVGKITSWMGKF 544

Query: 542  TNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEVA 601
             NKNVAKCAAR+GQCFSSTYAT+EV  + VN D+ D++RNGYVFSDGIG ITPDLA EVA
Sbjct: 545  NNKNVAKCAARMGQCFSSTYATVEVTSSEVN-DIPDIKRNGYVFSDGIGMITPDLALEVA 604

Query: 602  DKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTRF 661
            +KLK+D +PPCAYQIR+AG KGVVA WPSK DG RL+LR SMNKFES H  LEICSWTR+
Sbjct: 605  EKLKLDRNPPCAYQIRFAGCKGVVACWPSKGDGFRLSLRTSMNKFESKHTTLEICSWTRY 664

Query: 662  QPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAAA 721
            QPGFLNRQIITLLSTL+V DEIFW MQE M+ KL++M+ DTDVAF+VLTASCAEQGNAAA
Sbjct: 665  QPGFLNRQIITLLSTLNVEDEIFWRMQEKMVLKLNQMLVDTDVAFDVLTASCAEQGNAAA 724

Query: 722  IMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQCF 781
            IMLSAGF+P+TEPHLRGML CI+AAQLWGLREKARIFV  GRW MG  DE GVL++GQCF
Sbjct: 725  IMLSAGFKPQTEPHLRGMLTCIQAAQLWGLREKARIFVHSGRWLMGVLDELGVLEQGQCF 784

Query: 782  IQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHHL 841
            +QVSTPLLE CF+KHGS FA+ + NL V++G VVIAKNPCLHPGD+RILEAVDAP LHHL
Sbjct: 785  VQVSTPLLESCFAKHGSSFAQIERNLQVIKGHVVIAKNPCLHPGDIRILEAVDAPGLHHL 844

Query: 842  YDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQRK 901
            YDCLVFP+ G+RPHT+EASGSDLDGDLYF TWD NLIPPSKKSW PM+Y PAE K   R 
Sbjct: 845  YDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDENLIPPSKKSWMPMQYDPAEAKLQGRP 904

Query: 902  ITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTGK 961
            +T+ DI++FF KNM NE+LG ICNAHVVHADRS +GALD NC++L+ELAA AVDFPKTGK
Sbjct: 905  VTQQDIIDFFVKNMTNENLGPICNAHVVHADRSDYGALDVNCLKLAELAALAVDFPKTGK 964

Query: 962  LVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGDV 1021
            +V++P HLKP+LYPDF+GKE  QSYKSTKILG++YR++RDAY D+D  TS EL++ P D+
Sbjct: 965  IVSLPQHLKPRLYPDFLGKEDNQSYKSTKILGRLYRKVRDAY-DEDAATSSELHYFPSDI 1024

Query: 1022 HYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRKQ 1081
             YD+DLEV GA DF+ +AW++KCSYDGQL GL+GQYKV REEEIVTGH+WS+PK  S+KQ
Sbjct: 1025 PYDMDLEVPGAADFVFDAWEKKCSYDGQLKGLMGQYKVKREEEIVTGHVWSIPKSNSKKQ 1084

Query: 1082 GELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLKK 1141
            GELKE+L HSY+ LKK+FRQ+FENL    E LT DE+N L EKKASAWYQV YHP W+K+
Sbjct: 1085 GELKERLSHSYNALKKEFRQMFENLDSNLEALTDDEKNLLCEKKASAWYQVTYHPKWVKQ 1144

Query: 1142 SLELREPDAP-EAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1198
            S  L+EPD P + V MLSF WIAADYLARIKIKC   +  D TKPINSL  YL+DR+
Sbjct: 1145 SPPLQEPDGPGDVVVMLSFAWIAADYLARIKIKCHGVEHIDSTKPINSLKRYLADRI 1196

[Close]

BLAST of Csa2G381730.1 vs. TAIR10
Match: AT3G49500.1 (AT3G49500.1 RNA-dependent RNA polymerase 6)

HSP 1 Score: 1642.9 bits (4253), Expect = 0.0e+00
Identity = 791/1199 (65.97%), Postives = 954/1199 (79.57%), Query Frame = 1


Query: 1    MGSEEG-EKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEV 60
            MGSE   +K VVTQVS GGF     A+ L  YLE E+G+V RCRLKTSWTPP SYP+FE+
Sbjct: 1    MGSEGNMKKSVVTQVSIGGFGESTTAKQLTDYLEDEVGIVWRCRLKTSWTPPGSYPNFEI 60

Query: 61   SNVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHI 120
            ++ +N+   D+YKKV PHAFVHF   +SA  A+ AAG+  LI + + LK SLGP++P+ +
Sbjct: 61   ADTSNIPSIDEYKKVEPHAFVHFAVFESAGRAMDAAGQCNLILDGQPLKVSLGPKNPYSL 120

Query: 121  NQRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAF 180
            NQRRRT VP+KL+ + ++IG L   D F V+WR  + G+DFLVDPFD TCKFCF K TAF
Sbjct: 121  NQRRRTTVPYKLAGITLEIGTLVSRDDFFVSWR--AEGVDFLVDPFDNTCKFCFRKSTAF 180

Query: 181  SFKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKL 240
            SFKD   H  + CDYK+E +VRDI  + +Y     +V++LQL +SP +WYRTADDDI   
Sbjct: 181  SFKDAVMHAVINCDYKLELLVRDIQTVRQYKTLHGFVLILQLASSPRVWYRTADDDIYDT 240

Query: 241  VPYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLN 300
            VP DLLDDDDPWIRTTDFT  GAIGRC+++RV + PRY  KL  A++Y + +RV +  + 
Sbjct: 241  VPGDLLDDDDPWIRTTDFTQVGAIGRCHSYRVLISPRYENKLRTALDYFRMRRVQEERVR 300

Query: 301  RPPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRN 360
             PP+I NEP +G  ++DHFFCI +K+ ISFEI+FLVN+V+H+G+ NQ Q+++RFFDLLRN
Sbjct: 301  WPPRIRNEPCFGEPVSDHFFCIHHKEGISFEIMFLVNSVLHRGVFNQFQLTERFFDLLRN 360

Query: 361  QPNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITP 420
            QP +VN+A+L H+  ++RPV DA K+LKLVQEW+ KNP LL   ++  DI EIRRLVITP
Sbjct: 361  QPKDVNIASLKHLCTYKRPVFDAYKRLKLVQEWIQKNPKLLGSHEQSEDISEIRRLVITP 420

Query: 421  SKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSS 480
            ++AYC PPEVELSNRVLRRYK VA+RFLRVTFMDE M+ INS+V +Y+VAPIVK++TSSS
Sbjct: 421  TRAYCLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVAPIVKDLTSSS 480

Query: 481  FPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMG 540
            F QKT +F R+K IL  GF LCGRKYSFLA+S+NQLRD+SAWFFAE     V  I  WMG
Sbjct: 481  FSQKTYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKTRVSDIKTWMG 540

Query: 541  KFTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQE 600
            KF +KNVAKCAAR+G CFSSTYAT++V  + V+ ++ D+ERNGYVFSDGIGTITPDLA E
Sbjct: 541  KFKDKNVAKCAARMGLCFSSTYATVDVMPHEVDTEVPDIERNGYVFSDGIGTITPDLADE 600

Query: 601  VADKLKMDGS-PPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSW 660
            V +KLK+D    PCAYQIRYAG+KGVVA WPSK DGIRLALR SM KF S H ILEICSW
Sbjct: 601  VMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSMKKFFSKHTILEICSW 660

Query: 661  TRFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGN 720
            TRFQPGFLNRQIITLLS L VPDEIFW MQE+M+ KL+R++ DTDVAFEVLTASCAEQGN
Sbjct: 661  TRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAFEVLTASCAEQGN 720

Query: 721  AAAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEG 780
             AAIMLSAGF+P+TEPHLRGML  +R AQLWGLREK+RIFVT GRW MGC DE+G+L+ G
Sbjct: 721  TAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWLMGCLDEAGILEHG 780

Query: 781  QCFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPEL 840
            QCFIQVS P +E CFSKHGS F ETK +L VV+G V IAKNPCLHPGDVRILEAVD P+L
Sbjct: 781  QCFIQVSKPSIENCFSKHGSRFKETKTDLEVVKGYVAIAKNPCLHPGDVRILEAVDVPQL 840

Query: 841  HHLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTL 900
            HH+YDCL+FP+ G+RPHTNEASGSDLDGDLYF  WD  LIPP++KS+P M Y  AE K+L
Sbjct: 841  HHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPNRKSYPAMHYDAAEEKSL 900

Query: 901  QRKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPK 960
             R +   DI++FFA+N+ NE LGTICNAHVVHADRS++GA+DE C+ L+ELAATAVDFPK
Sbjct: 901  GRAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECLLLAELAATAVDFPK 960

Query: 961  TGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTP 1020
            TGK+V+MP HLKPKLYPDFMGKE  Q+YKS KILG++YRR+++ YD+D   +S E +  P
Sbjct: 961  TGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRRVKEVYDEDAEASSEE-STDP 1020

Query: 1021 GDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVS 1080
              + YD  LE+ G ED I EAW  KC YDGQL GLLGQYKV +EEEIVTGHIWSMPKY S
Sbjct: 1021 SAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYTS 1080

Query: 1081 RKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTW 1140
            +KQGELKE+LKHSY++LKK+FR+VFE   P+ E L+ +E+N LYEKKASAWY V YHP W
Sbjct: 1081 KKQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKASAWYHVTYHPEW 1140

Query: 1141 LKKSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1198
            +KKSLEL++PD      MLSF WIAADYLARIKI+ R   S D  KP++SLA +L+ R+
Sbjct: 1141 VKKSLELQDPDESSHAAMLSFAWIAADYLARIKIRSREMGSIDSAKPVDSLAKFLAQRL 1196

[Close]

BLAST of Csa2G381730.1 vs. TAIR10
Match: AT1G14790.1 (AT1G14790.1 RNA-dependent RNA polymerase 1)

HSP 1 Score: 559.7 bits (1441), Expect = 4.4e-159
Identity = 355/1000 (35.50%), Postives = 537/1000 (53.70%), Query Frame = 1


Query: 193  DYKMEFIVRDINQITRYTDT--SCYVILLQLTASPCIWYRTADDDIAKLVPYDLLD---- 252
            DY++E    +I QI  ++    S   +++Q+  +P I+ +  +D    L+ + ++D    
Sbjct: 143  DYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAPKIFEK--EDQPINLL-FGIMDFYSD 202

Query: 253  -DDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIK--LNNAMNYLKEQRVHQVSLNRPPK 312
              D+ WIRTTDFT S  IG+   F + +P    +     N  NY  E R     +     
Sbjct: 203  GSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNVPDFRENFANYA-EHRASSFLIESGSS 262

Query: 313  ILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQPNE 372
              +  +  V + D          + FEILF +N ++    ++   +   F+ LL  +  +
Sbjct: 263  YSSNANTLVPVVDPPPGF----SLPFEILFKLNTLVQNACLSGPALDLDFYRLLNQK--K 322

Query: 373  VNLAALSHIHAFRRPVLDACKK-----LKLVQEWLLKNPTLLKRSKELVD-IVEIRRLVI 432
             + A + H       + + C +         ++W+ K    L  +  L D +V + R+ +
Sbjct: 323  YDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGKLPLSPTISLDDGLVYMYRVQV 382

Query: 433  TPSKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITS 492
            TP++ Y   PEV +SNRVLR Y    + FLRV+F+DE ++K+ S   +            
Sbjct: 383  TPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVRSMDLS----------PR 442

Query: 493  SSFPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGW 552
            SS  ++TK++ R+  +L+ G  +  +K+ FLA+SS+QLR+ SAW FA    I+   I  W
Sbjct: 443  SSTQRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDRITAAHIRAW 502

Query: 553  MGKFTN-KNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVE----RNGYVFSDGIGTI 612
            MG F + +NVAK AAR+GQ FSS+  T+ V  + +   + DVE       YVFSDGIG I
Sbjct: 503  MGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEV-IPDVEIISLGTRYVFSDGIGKI 562

Query: 613  TPDLAQEVADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRI 672
            + + A++VA K  +    P A+QIRY GYKGVVA  P+     +L+LR SM+KFES +  
Sbjct: 563  SAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSK--KLSLRKSMSKFESENTK 622

Query: 673  LEICSWTRFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTAS 732
            L++ +W+++QP ++NRQ+ITLLSTL V D +F   Q  ++ +LD ++T    A E L   
Sbjct: 623  LDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPLEAHEALGLM 682

Query: 733  C-AEQGNAAAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDE 792
               E  N    ++  G++P  EP L  ML   RA++L  LR K RIF++ GR  MGC DE
Sbjct: 683  APGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGGRSMMGCLDE 742

Query: 793  SGVLQEGQCFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILE 852
            +  L+ GQ  +Q S P+      + G  F        ++ G VV+AKNPCLHPGDVR+L+
Sbjct: 743  TRTLEYGQVVVQYSDPM------RPGRRF--------IITGPVVVAKNPCLHPGDVRVLQ 802

Query: 853  AVDAPELHHLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYA 912
            AV+ P L+H+ DC+VFP+ G RPH NE SGSDLDGD+YF  WD  L+PP  ++  PM+Y 
Sbjct: 803  AVNVPALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPP--RTSEPMDYT 862

Query: 913  PAEVKTLQRKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAA 972
            P   + L   +T  ++ E+FA  ++N+SLG I NAH   AD+    A  + CI+L++  +
Sbjct: 863  PEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELAKKFS 922

Query: 973  TAVDFPKTGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITS 1032
            TAVDFPKTG    +P HL  K YPDFM K    +Y+S  ++GK++R +++      +I+ 
Sbjct: 923  TAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKER--APPLISI 982

Query: 1033 RELNFTPGDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIW 1092
            +          YD D+EV G E+++ EA+ QK +YD +L  L+  Y +  E EI++G I 
Sbjct: 983  KSFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGGIM 1042

Query: 1093 SMPKYVSRKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQ 1152
             M K  ++++    E +  +   L+K+   +F             E       KASAWY 
Sbjct: 1043 RMSKSFTKRRD--AESIGRAVRALRKETLSLF----------NASEEEENESAKASAWYH 1084

Query: 1153 VAYHPTWLKKSLELREPDAPEAVPMLSFPWIAADYLARIK 1172
            V YH ++     E    D       LSF W   D L RIK
Sbjct: 1103 VTYHSSYWGLYNEGLNRD-----HFLSFAWCVYDKLVRIK 1084

[Close]

BLAST of Csa2G381730.1 vs. TAIR10
Match: AT4G11130.1 (AT4G11130.1 RNA-dependent RNA polymerase 2)

HSP 1 Score: 505.8 bits (1301), Expect = 7.5e-143
Identity = 347/1051 (33.02%), Postives = 531/1051 (50.52%), Query Frame = 1


Query: 162  VDPFDGTCKFCFTKDTAFSFKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQL 221
            ++ +DG   +  T+     F         K + + E I+  ++       +     LL+L
Sbjct: 126  LEKWDGVRCWILTEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGDASEIDAFLLKL 185

Query: 222  TASPCIWYRTADDDIAKLVP----YDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRY 281
               P ++ R       K       +   D D  WIRTTDF+ S +IG    F + V    
Sbjct: 186  KYGPKVFKRVTVHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTSTCFCLEV--HN 245

Query: 282  GIKLNNAMNYLKEQRVHQVSLNRPPKILNEPDYG--VQMTDHFFCILYKKDISFEILFLV 341
            G  + +  + L   R   +SL      ++   +    Q+       +   +  +EILF +
Sbjct: 246  GSTMLDIFSGLPYYREDTLSLT----YVDGKTFASAAQIVPLLNAAILGLEFPYEILFQL 305

Query: 342  NAVMHKGIINQHQMSD-RFFDLLRNQPNEVNLAALSHIHAFRR----PVLDACKKLKLVQ 401
            NA++H   I+    SD     +LR    E  L  L  +H        PV     +++ V 
Sbjct: 306  NALVHAQKISLFAASDMELIKILRGMSLETALVILKKLHQQSSICYDPVFFVKTQMQSVV 365

Query: 402  EWLLKNPTLLKRSKELVDIVEIRRLVITPSKAYCFPPEVELSNRVLRRYKDVADRFLRVT 461
            + +  +P    +     +I+  +R  +TPSK Y   PE+E +N V++ + +    F+RVT
Sbjct: 366  KKMKHSPASAYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDFMRVT 425

Query: 462  FMDEGMKKINSHVYT------YYVAPIVKEITSSSFPQKTKIFARMKHILKHGFHLCGRK 521
            F++E   K+ ++  +      Y+V P            +T I+ R+  IL  G  +  ++
Sbjct: 426  FVEEDWSKLPANALSVNSKEGYFVKP-----------SRTNIYNRVLSILGEGITVGPKR 485

Query: 522  YSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGKFTN-KNVAKCAARIGQCFSSTYAT 581
            + FLA+S++QLR  S W FA  + +  + I  WMG F   ++++KCAAR+GQ FS++  T
Sbjct: 486  FEFLAFSASQLRGNSVWMFASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQT 545

Query: 582  IEVPRNMVNHDLSDVERN----GYVFSDGIGTITPDLAQEVADKLKMDGSPPCAYQIRYA 641
            + V    V   + D+E       Y FSDGIG I+   A++VA K  +    P A+QIRY 
Sbjct: 546  LIVRAQDVEQ-IPDIEVTTDGADYCFSDGIGKISLAFAKQVAQKCGLS-HVPSAFQIRYG 605

Query: 642  GYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTRFQPGFLNRQIITLLSTLSV 701
            GYKGV+A    +    +L+LR SM KF+SN+R+L +  WT   P FLNR+II LLSTL +
Sbjct: 606  GYKGVIAV--DRSSFRKLSLRDSMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGI 665

Query: 702  PDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQG-NAAAIMLSAGFEPRTEPHLRG 761
             D +F +MQ   +S L  M+ D D A  VL     E   N    ML  G+ P +EP+L  
Sbjct: 666  EDAMFEAMQAVHLSMLGNMLEDRDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSM 725

Query: 762  MLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQCFIQVSTPLLEKCFSKHGS 821
            ML     +QL  L+ + RI V +GR  +GC DE G+L+ GQ +++V+    E   S+  S
Sbjct: 726  MLRVHHESQLSELKSRCRILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAE-LKSRDQS 785

Query: 822  LFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH----LYDCLVFPRNGERP 881
             F +     +VV G VV+ KNPCLHPGD+R+L+A+   E+H       DC++FP+ GERP
Sbjct: 786  YFRKIDEETSVVIGKVVVTKNPCLHPGDIRVLDAIY--EVHFEEKGYLDCIIFPQKGERP 845

Query: 882  HTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQRKITRWDIMEFFAKN 941
            H NE SG DLDGD +F +WD  +IP      PPM+YA +  + +   +T  +I +FF   
Sbjct: 846  HPNECSGGDLDGDQFFVSWDEKIIPSEMD--PPMDYAGSRPRLMDHDVTLEEIHKFFVDY 905

Query: 942  MINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTGKLVTMPPHLKPKLY 1001
            MI+++LG I  AH+VHADR    A  + C++L+ L + AVDF KTG    MP  LKP+ +
Sbjct: 906  MISDTLGVISTAHLVHADRDPEKARSQKCLELANLHSRAVDFAKTGAPAEMPYALKPREF 965

Query: 1002 PDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD-VHYDVDLEVAGAE 1061
            PDF+ +    +Y S  + GK+YR ++ +      +  R+      D V YDV LE AG E
Sbjct: 966  PDFLERFEKPTYISESVFGKLYRAVKSS------LAQRKPEAESEDTVAYDVTLEEAGFE 1025

Query: 1062 DFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYV---SRKQGELKEKLKH 1121
             FI  A   +  Y  +L+ L+  Y    EEEI+TG + +   Y+   +R+ G++K+++  
Sbjct: 1026 SFIETAKAHRDMYGEKLTSLMIYYGAANEEEILTGILKTKEMYLARDNRRYGDMKDRITL 1085

Query: 1122 SYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLKKSLELREPDA 1181
            S   L K+    FE         +C++     +K ASAWY V Y+P              
Sbjct: 1086 SVKDLHKEAMGWFEK--------SCEDEQQ-KKKLASAWYYVTYNPN-----------HR 1124

[Close]

BLAST of Csa2G381730.1 vs. TAIR10
Match: AT2G05370.1 (AT2G05370.1 BEST Arabidopsis thaliana protein match is: RNA-dependent RNA polymerase 6 (TAIR:AT3G49500.1))

HSP 1 Score: 112.1 bits (279), Expect = 2.4e-24
Identity = 60/136 (44.12%), Postives = 86/136 (63.24%), Query Frame = 1


Query: 7   EKIVVTQVSFGGFDSDVKARDLMSYLESEIGL-VDRCRLKTSWTPPESYPDFEVSNVANV 66
           + +VV+QV+  GF    K ++L  YLE+++GL V RCRLKTSWTP  SYP+FE+ + +N+
Sbjct: 2   KNLVVSQVTISGFGESTKTKELTDYLENKVGLLVWRCRLKTSWTPHGSYPNFEIIDTSNI 61

Query: 67  IKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHINQRRRT 126
            K D Y++VVPHAFVH    D+    + AA + +LI   + LK SL  E+P+ +N     
Sbjct: 62  PKFDCYERVVPHAFVHC---DAHKSLMDAAEQSKLILGGQPLKFSLSSENPYTLN----- 121

Query: 127 KVPFKLSDVQVDIGNL 142
             P+KL+ V ++IG L
Sbjct: 122 --PYKLTGVSLEIGTL 127

HSP 2 Score: 91.3 bits (225), Expect = 4.4e-18
Identity = 44/74 (59.46%), Postives = 51/74 (68.92%), Query Frame = 1


Query: 221 LTASPCIWYRTADDDIAKLVPYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIK 280
           L +SP +WYRTADDDI +    DLLDD+DPWIRTTDFT SGAI RC  +RV + PR   K
Sbjct: 127 LASSPRVWYRTADDDIYETSAVDLLDDNDPWIRTTDFTQSGAIRRCLGYRVFISPRDHNK 186

Query: 281 LNNAMNYLKEQRVH 295
               ++YLK QRV+
Sbjct: 187 WTKVLDYLKTQRVN 200

[Close]

BLAST of Csa2G381730.1 vs. TAIR10
Match: AT2G19930.1 (AT2G19930.1 RNA-dependent RNA polymerase family protein)

HSP 1 Score: 105.9 bits (263), Expect = 1.7e-22
Identity = 125/543 (23.02%), Postives = 225/543 (41.44%), Query Frame = 1


Query: 574  DLSDVERNGYVFSDGIGTITPDLA---------------QEVADKLKMDGSPPCAYQIR- 633
            D+ D  +   + SDG G I+ DLA               + + +    D  PP   Q R 
Sbjct: 387  DVLDKNKKPCIHSDGTGYISEDLARMCPLNIFKGKCLRSESIQEACYQD--PPLLIQFRM 446

Query: 634  -YAGY--KGVVA--------TWPSKKDGIRLALRPSMNKFESNHRILEICSWTRFQPGFL 693
             Y GY  KG           T   +   I+++  PS++ F + + +  + +    +   L
Sbjct: 447  FYDGYAVKGTFLLNKKLCPRTVQVRPSMIKVSKDPSLSNFSTFNALEVVTTSNPPKRTKL 506

Query: 694  NRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAAAIMLSA 753
            ++ ++ LLS   +P+E F  +    + +   +  +   A              AA M+  
Sbjct: 507  SKNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKRAALNAALNYGEMDDQNAAQMILV 566

Query: 754  GFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQCFIQVST 813
            G  P  EPHL+  L  +   +   L+   ++ VTE  + MG  D +G L+E +  +    
Sbjct: 567  GI-PLDEPHLKNYLSILLKTEKNDLKA-GKLPVTESYYLMGTVDPTGALKEDEVCV---- 626

Query: 814  PLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHHLYD--- 873
             +LE                   + G V++ +NP LH GD+ IL+A     L        
Sbjct: 627  -ILES----------------GQISGEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSK 686

Query: 874  -CLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLI-------------PPSKKS--WPP 933
              + FP+ G R   +E +G D DGD+YF + +  L+             PPSK +    P
Sbjct: 687  FAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPELLENFKPSEPWVSLTPPSKSNSGRAP 746

Query: 934  MEYAPAEVKTLQRKITRWDIMEFFAKNMIN---ESLGTICNAHVVHAD--RSKHGALDEN 993
             + +P E++  +     +    F A N+I    +S  TI +  ++  D    +   + + 
Sbjct: 747  SQLSPEELE--EELFEMFLTAGFHASNVIGIAADSWLTIMDRFLILGDDRAEEKAEMKKK 806

Query: 994  CIQLSELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDA 1053
             ++L ++   A+D PK G  V +P  LKP ++P +M  E  + ++ST ILG ++  ++ +
Sbjct: 807  MLELIDIYYDALDAPKKGDKVYLPNKLKPDIFPHYM--ERDKKFQSTSILGLIFDFVK-S 866

Query: 1054 YDDDDMITSRELNFTPGDVHYDVDLEVAGAEDFIAEAWDQKCS--YDGQLSGLLGQYKVN 1064
               ++   S E++  P              ++ ++E   QKC   YD   + +    K +
Sbjct: 867  QTTEEPSPSSEISKLP-----------CFEDEPVSEFHMQKCRLWYDNYRTEMTQAMKTD 888

[Close]

BLAST of Csa2G381730.1 vs. NCBI nr
Match: gi|525507190|ref|NP_001267634.1| (RNA-dependent RNA polymerase 6-like [Cucumis sativus])

HSP 1 Score: 2458.3 bits (6370), Expect = 0.0e+00
Identity = 1197/1197 (100.00%), Postives = 1197/1197 (100.00%), Query Frame = 1


Query: 1    MGSEEGEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS 60
            MGSEEGEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS
Sbjct: 1    MGSEEGEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS 60

Query: 61   NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHIN 120
            NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHIN
Sbjct: 61   NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHIN 120

Query: 121  QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS 180
            QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS
Sbjct: 121  QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS 180

Query: 181  FKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKLV 240
            FKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKLV
Sbjct: 181  FKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKLV 240

Query: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR 300
            PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR
Sbjct: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR 300

Query: 301  PPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ 360
            PPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ
Sbjct: 301  PPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ 360

Query: 361  PNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPS 420
            PNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPS
Sbjct: 361  PNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPS 420

Query: 421  KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480
            KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF
Sbjct: 421  KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480

Query: 481  PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGK 540
            PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGK
Sbjct: 481  PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGK 540

Query: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEV 600
            FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEV
Sbjct: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEV 600

Query: 601  ADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTR 660
            ADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTR
Sbjct: 601  ADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTR 660

Query: 661  FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA 720
            FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA
Sbjct: 661  FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA 720

Query: 721  AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC 780
            AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC
Sbjct: 721  AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC 780

Query: 781  FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840
            FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH
Sbjct: 781  FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840

Query: 841  LYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQR 900
            LYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQR
Sbjct: 841  LYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQR 900

Query: 901  KITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTG 960
            KITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTG
Sbjct: 901  KITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTG 960

Query: 961  KLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD 1020
            KLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD
Sbjct: 961  KLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD 1020

Query: 1021 VHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK 1080
            VHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK
Sbjct: 1021 VHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK 1080

Query: 1081 QGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLK 1140
            QGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLK
Sbjct: 1081 QGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLK 1140

Query: 1141 KSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1198
            KSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM
Sbjct: 1141 KSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1197

[Close]

BLAST of Csa2G381730.1 vs. NCBI nr
Match: gi|659088868|ref|XP_008445204.1| (PREDICTED: RNA-dependent RNA polymerase 6 [Cucumis melo])

HSP 1 Score: 2394.0 bits (6203), Expect = 0.0e+00
Identity = 1162/1197 (97.08%), Postives = 1182/1197 (98.75%), Query Frame = 1


Query: 1    MGSEEGEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS 60
            MGSEE EKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS
Sbjct: 1    MGSEESEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS 60

Query: 61   NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHIN 120
            NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGEL+FN KLLKASLGPESPFHIN
Sbjct: 61   NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELLFNGKLLKASLGPESPFHIN 120

Query: 121  QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS 180
            QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS
Sbjct: 121  QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS 180

Query: 181  FKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKLV 240
            FKDNNK+T LKCDYK+EFIVRDINQI RYTDTSCYVILLQLT+SPCIWYRTADDDIAK V
Sbjct: 181  FKDNNKYTVLKCDYKLEFIVRDINQIKRYTDTSCYVILLQLTSSPCIWYRTADDDIAKSV 240

Query: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR 300
            PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR
Sbjct: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR 300

Query: 301  PPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ 360
            PPKILNEPDYGVQMTDHFFCI YK+DISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ
Sbjct: 301  PPKILNEPDYGVQMTDHFFCIFYKEDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ 360

Query: 361  PNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPS 420
            PNEVNLAALSHIH++RRPVLDACKKLKLVQEWLLKNPTL KRSKELVDIVEIRRLVITPS
Sbjct: 361  PNEVNLAALSHIHSYRRPVLDACKKLKLVQEWLLKNPTLWKRSKELVDIVEIRRLVITPS 420

Query: 421  KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480
            KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF
Sbjct: 421  KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480

Query: 481  PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGK 540
            PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECK+ISVD ILGWMGK
Sbjct: 481  PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKNISVDGILGWMGK 540

Query: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEV 600
            FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNH+L DVERNGYVFSDGIGTITPDLAQEV
Sbjct: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHNLQDVERNGYVFSDGIGTITPDLAQEV 600

Query: 601  ADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTR 660
            ADKLKMDGS PCAYQIRYAGYKGVVATWPSK+DGIRLALRPSMNKFES+HRILEICSWTR
Sbjct: 601  ADKLKMDGSLPCAYQIRYAGYKGVVATWPSKEDGIRLALRPSMNKFESDHRILEICSWTR 660

Query: 661  FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA 720
            FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA
Sbjct: 661  FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA 720

Query: 721  AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC 780
            AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC
Sbjct: 721  AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC 780

Query: 781  FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840
            FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH
Sbjct: 781  FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840

Query: 841  LYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQR 900
            LYDCLVFP+NGERPHTNEASGSDLDGDLYFTTWD NLIPPSKKSWPPMEYAPA+VKTLQR
Sbjct: 841  LYDCLVFPQNGERPHTNEASGSDLDGDLYFTTWDENLIPPSKKSWPPMEYAPADVKTLQR 900

Query: 901  KITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTG 960
            KITR DIMEFFAKNMINESLGTICNAHVVHADRSK+GALDENCIQLSELAATAVDFPKTG
Sbjct: 901  KITRLDIMEFFAKNMINESLGTICNAHVVHADRSKYGALDENCIQLSELAATAVDFPKTG 960

Query: 961  KLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD 1020
            K+VTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD
Sbjct: 961  KIVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD 1020

Query: 1021 VHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK 1080
            VHYDVDLEVAGAEDFIAEAW+QKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK
Sbjct: 1021 VHYDVDLEVAGAEDFIAEAWNQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK 1080

Query: 1081 QGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLK 1140
            QGELKEKLKHSYSTLKKDFRQVFEN+GPEFEQLTCDERNA YEKKASAWYQVAYHPTWLK
Sbjct: 1081 QGELKEKLKHSYSTLKKDFRQVFENIGPEFEQLTCDERNAFYEKKASAWYQVAYHPTWLK 1140

Query: 1141 KSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1198
            KSLELREPDAPEA+PMLSFPWIAADYLARIKIKCRR KSFDPTKPINSL SYLS+R+
Sbjct: 1141 KSLELREPDAPEAIPMLSFPWIAADYLARIKIKCRRMKSFDPTKPINSLVSYLSERI 1197

[Close]

BLAST of Csa2G381730.1 vs. NCBI nr
Match: gi|802627169|ref|XP_012076580.1| (PREDICTED: RNA-dependent RNA polymerase 6-like [Jatropha curcas])

HSP 1 Score: 1830.8 bits (4741), Expect = 0.0e+00
Identity = 872/1198 (72.79%), Postives = 1016/1198 (84.81%), Query Frame = 1


Query: 1    MGSEEGEK-IVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEV 60
            M +++ EK  VVTQVSFGGFD+ VKA+DL++YLE EIG V RCRLKTSWTPPESYP+FE+
Sbjct: 1    METQKSEKDTVVTQVSFGGFDNHVKAKDLVAYLEEEIGQVWRCRLKTSWTPPESYPNFEI 60

Query: 61   SNVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHI 120
            ++ A + ++ +YK+V PHAFVHF S +SA  A +AAG  EL  ND+ LK SLGPE+PFH+
Sbjct: 61   TDAAAIHRTHEYKRVEPHAFVHFASAESATWAKNAAGHCELFLNDRPLKVSLGPENPFHL 120

Query: 121  NQRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAF 180
            NQRRR  +PFKLSDV ++IG L   D F V WRGPSSG+DFLVDPFDGTCKFCFT DTAF
Sbjct: 121  NQRRRKNIPFKLSDVCIEIGTLVSRDEFLVGWRGPSSGVDFLVDPFDGTCKFCFTMDTAF 180

Query: 181  SFKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKL 240
            S KD  KH  ++CD+K+EF+VRDIN++ +YTDTSC VILLQL ++P +WYRTADDDI   
Sbjct: 181  SIKDTTKHAIIRCDFKLEFLVRDINEVKQYTDTSCIVILLQLASAPLVWYRTADDDIEVS 240

Query: 241  VPYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLN 300
            VP+DLLDDDDPWIRTTDFT SGAIGRCN +RVS+PPR+G KL  A N+LKE+RV + SL 
Sbjct: 241  VPFDLLDDDDPWIRTTDFTPSGAIGRCNFYRVSIPPRHGAKLKRARNFLKERRVQEDSLR 300

Query: 301  RPPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRN 360
            RP KI+NEPDYG+ M+D FFCI +K+ I+FEI+FLVNAVMHKGI NQHQ+SD FFDLLRN
Sbjct: 301  RPLKIVNEPDYGMPMSDPFFCIHHKEGIAFEIMFLVNAVMHKGIFNQHQLSDNFFDLLRN 360

Query: 361  QPNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITP 420
            Q  ++N+AAL HI ++++PV DA K LK VQEWLLKNP L KRSK+L DIVEIRRL +TP
Sbjct: 361  QSLDINVAALKHICSYKQPVFDAHKGLKAVQEWLLKNPKLFKRSKQLDDIVEIRRLALTP 420

Query: 421  SKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSS 480
            ++AYC PPEVELSNRVLR+YK++ADRFLRVTFMDEG++ IN++  TYYVAPIV++ITS+S
Sbjct: 421  TRAYCLPPEVELSNRVLRKYKNIADRFLRVTFMDEGLQTINANTLTYYVAPIVRDITSTS 480

Query: 481  FPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMG 540
            F QKT+IF R+K IL  GF+LCGR+YSFLA+SSNQLRD+SAWFFAE   ISV  I  WMG
Sbjct: 481  FSQKTRIFRRVKSILTDGFNLCGRRYSFLAFSSNQLRDRSAWFFAEDGKISVGQIRKWMG 540

Query: 541  KFTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQE 600
            +FTN+N+AKCAAR+GQCFSSTYAT+EVP + VNH L D+ERNGY+FSDGIGTITPDLA+E
Sbjct: 541  RFTNRNIAKCAARMGQCFSSTYATVEVPSSEVNHALPDIERNGYIFSDGIGTITPDLAKE 600

Query: 601  VADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWT 660
            VA+KLK+D + PCAYQIRYAG KGVVA WP++ DGIRL+LRPSMNKF+SNH  LEICSWT
Sbjct: 601  VAEKLKLDINLPCAYQIRYAGCKGVVACWPAQGDGIRLSLRPSMNKFQSNHTTLEICSWT 660

Query: 661  RFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNA 720
            RFQPGFLNRQIITLLSTL+V DE+FW MQ  M+SKL++M+TD DVAF+V+T SCAEQGN 
Sbjct: 661  RFQPGFLNRQIITLLSTLNVSDEVFWEMQTAMVSKLNKMLTDADVAFDVITKSCAEQGNT 720

Query: 721  AAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQ 780
            AAIMLSAGF+P+ EPHLRGML CIRAAQ WGLREKARIFVT GRW MGC DE GVL++GQ
Sbjct: 721  AAIMLSAGFKPQNEPHLRGMLTCIRAAQFWGLREKARIFVTSGRWLMGCLDELGVLEQGQ 780

Query: 781  CFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELH 840
            CFIQVS P LE CFSKHGS F+ETK NL V++GTVVIAKNPCLHPGDVRILEAVDAP LH
Sbjct: 781  CFIQVSNPCLETCFSKHGSKFSETKKNLQVIKGTVVIAKNPCLHPGDVRILEAVDAPGLH 840

Query: 841  HLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQ 900
            HL+DCLVFP+ G+RPHTNEASGSDLDGDLYF TWD NLIPPSKKSW PM+Y  AE K L 
Sbjct: 841  HLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDDNLIPPSKKSWTPMQYDAAEAKLLN 900

Query: 901  RKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKT 960
            R ++  DI++FFAKNM+NE+LG ICNAHVVHAD S+HGALDENCI+L+ELAATAVDFPKT
Sbjct: 901  RPVSHQDIIDFFAKNMVNENLGAICNAHVVHADLSEHGALDENCIKLAELAATAVDFPKT 960

Query: 961  GKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPG 1020
            GKLVTMPP+LKPK+YPDFMGKE  QSYKSTKILG++YR+I DAY DDD     ELN   G
Sbjct: 961  GKLVTMPPYLKPKMYPDFMGKEEYQSYKSTKILGRLYRQIIDAYGDDDAAAFSELNCLSG 1020

Query: 1021 DVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSR 1080
            D+ YD DLEV G+ D+I EAWDQKCSYDGQL GLLGQYKV REEE+VTGHIWSMP   SR
Sbjct: 1021 DIPYDADLEVLGSADYILEAWDQKCSYDGQLKGLLGQYKVKREEELVTGHIWSMPMSNSR 1080

Query: 1081 KQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWL 1140
            KQG+LKE+LKHSYS LKK+FRQVFE +  + EQLT DE+N  YE+KASAWYQVAYHP W+
Sbjct: 1081 KQGDLKERLKHSYSALKKEFRQVFEGMNLDVEQLTDDEKNLQYERKASAWYQVAYHPKWI 1140

Query: 1141 KKSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1198
            KKSLEL+E DAP    MLSF WIAADYLARIKIK R T+  D  KP+NSL  YL+DR+
Sbjct: 1141 KKSLELQESDAPGNATMLSFSWIAADYLARIKIKRRGTEGIDTAKPVNSLVKYLTDRI 1198

[Close]

BLAST of Csa2G381730.1 vs. NCBI nr
Match: gi|1009137114|ref|XP_015885879.1| (PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba])

HSP 1 Score: 1792.3 bits (4641), Expect = 0.0e+00
Identity = 859/1199 (71.64%), Postives = 1006/1199 (83.90%), Query Frame = 1


Query: 1    MGSEEGEK-IVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEV 60
            MGS+E EK +VVTQVS GGFD  V+A+DL  +LE EIGLV RCRLKTS TPPESYPD+ +
Sbjct: 1    MGSKENEKQMVVTQVSLGGFDRHVRAKDLSDFLEDEIGLVYRCRLKTSSTPPESYPDYTI 60

Query: 61   SNVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHI 120
               A + + DDYKKV PHAFVHF   +SA   L AAGR ELI ND+ LK SLGPE+P+ +
Sbjct: 61   DTAA-IERKDDYKKVEPHAFVHFALAESAKWILDAAGRCELILNDRPLKVSLGPENPYRL 120

Query: 121  NQRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAF 180
            NQRRRT  P KLSDV VDIG L   D F +AWRGP  G+DFLVDPFDGTCKFCFT+DTAF
Sbjct: 121  NQRRRTTTPIKLSDVVVDIGTLVTRDQFFIAWRGPPYGVDFLVDPFDGTCKFCFTRDTAF 180

Query: 181  SFKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKL 240
            SFK +  H  +KCD+KMEF+VRDIN+  +YTDTS  V+LLQL ++P IWYRTADDDI   
Sbjct: 181  SFKGSLNHAVIKCDFKMEFLVRDINEFKQYTDTSYLVLLLQLNSAPRIWYRTADDDIDDS 240

Query: 241  VPYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLN 300
            VPYD+LDDDDPWIRTTDFT SGAIGR N++R+SVPPR+G KL  A++YL+E+RVH  SL 
Sbjct: 241  VPYDMLDDDDPWIRTTDFTPSGAIGRSNSYRISVPPRHGAKLKKAISYLRERRVHHDSLR 300

Query: 301  RPPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRN 360
             P +I  EPD+ + M+D FFCI YK+DI FE +FLVNAV+HKGI NQHQ+SD FF+LLRN
Sbjct: 301  WPLRIQKEPDFDMPMSDPFFCIHYKEDIDFETMFLVNAVIHKGIFNQHQISDGFFNLLRN 360

Query: 361  QPNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITP 420
            Q  EVN+AAL HI +++RPV DAC++LK+VQEWLL++P L K+ K L DI E+RRLVITP
Sbjct: 361  QMKEVNVAALKHISSYKRPVFDACRRLKVVQEWLLRDPKLFKKPKRLDDIAEVRRLVITP 420

Query: 421  SKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSS 480
            ++AYC PPEVELSNRVLR YK+VADRFLRVTFMDEGM+ INS+V TY+VA IV+EITS+S
Sbjct: 421  TRAYCLPPEVELSNRVLRNYKEVADRFLRVTFMDEGMQTINSNVLTYHVASIVREITSNS 480

Query: 481  FPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMG 540
            FPQKTK+F R+K IL +GF+LCGRKYSFLA+SSNQLRD+SAWFFAE K+I+V  +  WMG
Sbjct: 481  FPQKTKVFQRIKSILTNGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKNINVFEVKSWMG 540

Query: 541  KFTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQE 600
            +FTN+NVAKCAAR+G CFSSTYA++EVP   VN    D++RNGY FSDGIG ITPDLA E
Sbjct: 541  RFTNRNVAKCAARMGLCFSSTYASVEVPSTQVNRGFPDIKRNGYTFSDGIGKITPDLALE 600

Query: 601  VADKLKMDGSPPCAYQIRYAGYKGVVATW-PSKKDGIRLALRPSMNKFESNHRILEICSW 660
            VA KLK++ +PPCAYQIRYAG+KGVVA W P+  DG RL+LRPSM+KF+SNH ILEICSW
Sbjct: 601  VAQKLKLERNPPCAYQIRYAGFKGVVACWKPTDDDGARLSLRPSMDKFQSNHTILEICSW 660

Query: 661  TRFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGN 720
            TRFQPGFLNRQI+TLLS L+V DEIFW+MQETMI KL++M+ DTD+AF+VLTASCAEQGN
Sbjct: 661  TRFQPGFLNRQIVTLLSALNVSDEIFWNMQETMIFKLNQMLIDTDIAFDVLTASCAEQGN 720

Query: 721  AAAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEG 780
             AAIMLSAGF P+ EPHLRGML CIRAAQLWGLREKARIFV  GRW MGC DE GVL++G
Sbjct: 721  VAAIMLSAGFSPQKEPHLRGMLTCIRAAQLWGLREKARIFVPSGRWLMGCLDELGVLEQG 780

Query: 781  QCFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPEL 840
            QCFIQVS P LE CFSKHGS F E  +NL V++G VVIAKNPCLHPGDVRILEAVD P+L
Sbjct: 781  QCFIQVSNPSLENCFSKHGSRFNERNDNLEVIKGFVVIAKNPCLHPGDVRILEAVDVPDL 840

Query: 841  HHLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTL 900
            HHLYDCLVFP+ GERPHTNEASGSDLDGDLYF TWD NLIPPSKKSW PM+Y  AE K L
Sbjct: 841  HHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMQYDAAETKQL 900

Query: 901  QRKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPK 960
             R +T+ DI+EFF+KNM+NE+LGTICNAHVVHAD S+HGALDE C++L++LAATAVDFPK
Sbjct: 901  TRPVTQEDIIEFFSKNMVNENLGTICNAHVVHADLSEHGALDEKCLKLADLAATAVDFPK 960

Query: 961  TGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTP 1020
            TGK+VTMP +LKPKLYPDFMGK+  QSYKS KILGK+YR+I+DAY D+D+  S E+NF P
Sbjct: 961  TGKIVTMPFNLKPKLYPDFMGKDEYQSYKSNKILGKLYRKIKDAY-DEDVTASSEINFLP 1020

Query: 1021 GDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVS 1080
             D+ YD+DLEV+GA DFI +AW+QKCSYDGQL+GLLGQYKVNREEE+VTGHIWSMPKY S
Sbjct: 1021 SDIPYDIDLEVSGASDFIVDAWEQKCSYDGQLNGLLGQYKVNREEEVVTGHIWSMPKYSS 1080

Query: 1081 RKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTW 1140
            RKQGELKE+LKHSYS LKK+FRQ+FE +  +FE+L+ DE+N +YE+KASAWYQV YHP W
Sbjct: 1081 RKQGELKERLKHSYSALKKEFRQIFEKMEEKFEELSDDEKNIIYEQKASAWYQVTYHPEW 1140

Query: 1141 LKKSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1198
            +KKSL+L+EPD      MLSF WIAADYL RIKI+CR   + D  KPIN+L  YLSDRM
Sbjct: 1141 VKKSLDLQEPDGSRYAVMLSFAWIAADYLTRIKIRCRGVGNVDCDKPINALGKYLSDRM 1197

[Close]

BLAST of Csa2G381730.1 vs. NCBI nr
Match: gi|255548928|ref|XP_002515520.1| (PREDICTED: RNA-dependent RNA polymerase 6 [Ricinus communis])

HSP 1 Score: 1786.5 bits (4626), Expect = 0.0e+00
Identity = 849/1196 (70.99%), Postives = 995/1196 (83.19%), Query Frame = 1


Query: 7    EKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVSNVANVI 66
            ++ VVTQVSFGGFD DV ARDL++YL++EIG V RCRLKTSWTPPESYP+FE+++ A + 
Sbjct: 8    KETVVTQVSFGGFDKDVTARDLVAYLDNEIGQVWRCRLKTSWTPPESYPNFEITDTAVIQ 67

Query: 67   KSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHINQRRRTK 126
            + D Y++V PHAFVHF SPDSA  A +AAG  EL FN + +K SLGPE+PFH+NQRRRT 
Sbjct: 68   RVDAYRRVEPHAFVHFASPDSATWAKNAAGHCELFFNGRPVKVSLGPENPFHLNQRRRTT 127

Query: 127  VPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFSFKDNNK 186
            +PFKLSDV V+IG L   D F V WRGP SG+DFLVDPFDG CKFCFT+DTAFSFK   +
Sbjct: 128  IPFKLSDVHVEIGTLVSRDEFLVGWRGPPSGVDFLVDPFDGKCKFCFTRDTAFSFKGTTE 187

Query: 187  HTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKLVPYDLLD 246
            H  ++CD+K+EF+VRDIN+I +YTDTSC VILLQL ++P +WYRTADDDI  LVP+DLLD
Sbjct: 188  HAVIRCDFKLEFLVRDINEIKQYTDTSCLVILLQLASAPSVWYRTADDDIEVLVPFDLLD 247

Query: 247  DDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNRPPKILN 306
            DDDPWIRTTDFT SGAIGRCN++RVS+PPR+G KL  A+N+L+E+RV +  L RP  +  
Sbjct: 248  DDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGAKLKRALNFLRERRVQEDCLRRPLHVTA 307

Query: 307  EPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQPNEVNL 366
            EP+Y + M+D FFCI +++ + F ++FLVNAVMHKGI NQHQ+SD FFDLLRNQP +VN+
Sbjct: 308  EPEYEMPMSDPFFCIHHEEGVDFNLMFLVNAVMHKGIFNQHQLSDSFFDLLRNQPLDVNI 367

Query: 367  AALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPSKAYCFP 426
            AAL HI +++ PV DA K+LK VQ+WLLKNP L + SK+L DIVEIRRL ITP++AYC P
Sbjct: 368  AALRHICSYKHPVFDAHKRLKAVQQWLLKNPKLFRSSKQLDDIVEIRRLAITPTRAYCLP 427

Query: 427  PEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSFPQKTKI 486
            PEVELSNRVLRRYKD+AD+FLRVTFMDEG++ +N++  TYY APIV++ITS+SF QKT+I
Sbjct: 428  PEVELSNRVLRRYKDIADQFLRVTFMDEGLQTMNANTLTYYCAPIVRDITSNSFSQKTRI 487

Query: 487  FARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGKFTNKNV 546
            F R+K IL  GF+LCGRKYSFLA+SSNQLRD+SAWFFAE    SV  I  WMGKFTN+N+
Sbjct: 488  FKRVKSILTDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDGKTSVSKIRNWMGKFTNRNI 547

Query: 547  AKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEVADKLKM 606
            AKCAAR+GQCFSSTYAT+EVP      DL D+ERN Y+FSDGIG ITPDLA+EVA+KLK+
Sbjct: 548  AKCAARMGQCFSSTYATVEVPSAEAILDLPDIERNNYIFSDGIGMITPDLAKEVAEKLKL 607

Query: 607  DGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTRFQPGFL 666
            + +PPCAYQIRYAG KGVVA WP+  DGIRL+LR SMNKF SNH  LEICSWTRFQPGFL
Sbjct: 608  EVNPPCAYQIRYAGCKGVVACWPAHIDGIRLSLRVSMNKFHSNHTTLEICSWTRFQPGFL 667

Query: 667  NRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAAAIMLSA 726
            NRQIITLLSTL VPDEIFW MQ  M+SKL++M  D DVAF+V+TASCAEQGN AAIMLSA
Sbjct: 668  NRQIITLLSTLDVPDEIFWKMQIVMVSKLNQMFMDADVAFDVVTASCAEQGNTAAIMLSA 727

Query: 727  GFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQCFIQVST 786
            GF P+TEPHL GML CIRAAQLWGLREK RIFV  GRW MGC DE GVL+ GQCFIQVS 
Sbjct: 728  GFNPKTEPHLCGMLTCIRAAQLWGLREKTRIFVPSGRWLMGCLDELGVLEHGQCFIQVSN 787

Query: 787  PLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHHLYDCLV 846
            P LE CF KHGS F+E+K  L VV+GTVV+AKNPCLHPGD+RILEAVDAPELHHL+DCLV
Sbjct: 788  PSLESCFWKHGSRFSESKKKLQVVKGTVVVAKNPCLHPGDIRILEAVDAPELHHLHDCLV 847

Query: 847  FPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQRKITRWD 906
            FP+ G+RPHTNEASGSDLDGDLYF TWD NLIPPSK+SW PM+Y  AE K L R +   D
Sbjct: 848  FPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWLPMQYDAAEAKQLNRPVNHQD 907

Query: 907  IMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTGKLVTMP 966
            I++FFAKNM+NE+LG ICNAHVVHAD S++GALDENCI+L+ELAATAVDFPKTGKLVTMP
Sbjct: 908  IIDFFAKNMVNENLGAICNAHVVHADLSEYGALDENCIKLAELAATAVDFPKTGKLVTMP 967

Query: 967  PHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAY-----DDDDMITSRELNFTPGDV 1026
            PHLKPKLYPDFMGKE  QSY S KILG++YR+++D Y     DDDD  TS ELN   GD+
Sbjct: 968  PHLKPKLYPDFMGKEDYQSYNSNKILGRLYRQVKDDYNDDDDDDDDAATSSELNLVRGDI 1027

Query: 1027 HYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRKQ 1086
             YD DLEV+G+ D+I +AWDQKCSYDGQL GLL QYKV REEE+VTGHIWSMPK  SRKQ
Sbjct: 1028 PYDKDLEVSGSSDYILDAWDQKCSYDGQLKGLLAQYKVKREEEVVTGHIWSMPKCNSRKQ 1087

Query: 1087 GELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLKK 1146
            GELKE+LK SY +LKK+FRQVFE +  +FEQLT DE+N LYE+KASAWYQVAYHP W+ K
Sbjct: 1088 GELKERLKQSYHSLKKEFRQVFEKMDSDFEQLTEDEKNLLYEQKASAWYQVAYHPKWVNK 1147

Query: 1147 SLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1198
            S+EL+EPDA     MLSF WIAADYLARIKI+CR     D +KP+NSL  YL+DR+
Sbjct: 1148 SMELQEPDAAGCASMLSFAWIAADYLARIKIRCRGFDGVDTSKPVNSLVKYLADRI 1203

The following BLAST results are available for this feature:

BLAST of Csa2G381730.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RDR6_ARATH	0.0e+00	65.97	RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana GN=RDR6 PE=1 SV=1	[more]
SHL2_ORYSJ	0.0e+00	57.42	Probable RNA-dependent RNA polymerase SHL2 OS=Oryza sativa subsp. japonica GN=SH...	[more]
RDR1_ARATH	7.8e-158	35.50	RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana GN=RDR1 PE=2 SV=1	[more]
RDR2_ORYSJ	3.1e-154	35.85	Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica GN=RDR2 ...	[more]
RDR1_ORYSJ	1.0e-149	40.26	Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica GN=RDR1 ...	[more]

BLAST of Csa2G381730.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A067KP71_JATCU	0.0e+00	72.79	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07170 PE=4 SV=1	[more]
B9RP51_RICCO	0.0e+00	70.99	RNA-dependent RNA polymerase, putative OS=Ricinus communis GN=RCOM_0924060 PE=4 ...	[more]
B9IKW9_POPTR	0.0e+00	70.52	SILENCING DEFECTIVE 1 family protein OS=Populus trichocarpa GN=POPTR_0018s01670g...	[more]
A0A067L2C2_JATCU	0.0e+00	71.54	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03988 PE=4 SV=1	[more]
M5XL37_PRUPE	0.0e+00	71.26	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000422mg PE=4 SV=1	[more]

BLAST of Csa2G381730.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G49500.1	0.0e+00	65.97	RNA-dependent RNA polymerase 6	[more]
AT1G14790.1	4.4e-159	35.50	RNA-dependent RNA polymerase 1	[more]
AT4G11130.1	7.5e-143	33.02	RNA-dependent RNA polymerase 2	[more]
AT2G05370.1	2.4e-24	44.12	BEST Arabidopsis thaliana protein match is: RNA-dependent RNA polyme...	[more]
AT2G19930.1	1.7e-22	23.02	RNA-dependent RNA polymerase family protein	[more]

BLAST of Csa2G381730.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|525507190\|ref\|NP_001267634.1\|	0.0e+00	100.00	RNA-dependent RNA polymerase 6-like [Cucumis sativus]	[more]
gi\|659088868\|ref\|XP_008445204.1\|	0.0e+00	97.08	PREDICTED: RNA-dependent RNA polymerase 6 [Cucumis melo]	[more]
gi\|802627169\|ref\|XP_012076580.1\|	0.0e+00	72.79	PREDICTED: RNA-dependent RNA polymerase 6-like [Jatropha curcas]	[more]
gi\|1009137114\|ref\|XP_015885879.1\|	0.0e+00	71.64	PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba]	[more]
gi\|255548928\|ref\|XP_002515520.1\|	0.0e+00	70.99	PREDICTED: RNA-dependent RNA polymerase 6 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR007855	RNA-dep_RNA_pol_euk-typ

Vocabulary: **Molecular Function**
Term	Definition
GO:0003968	RNA-directed RNA polymerase activity

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048440	carpel development
biological_process	GO:0048366	leaf development
biological_process	GO:0010267	production of ta-siRNAs involved in RNA interference
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0048544	recognition of pollen
biological_process	GO:0001172	transcription, RNA-templated
biological_process	GO:0009616	virus induced gene silencing
cellular_component	GO:0005634	nucleus
cellular_component	GO:0031379	RNA-directed RNA polymerase complex
molecular_function	GO:0003968	RNA-directed RNA polymerase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa2G381730	Csa2G381730	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa2G381730.1	Csa2G381730.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa2G381730.1.utr5p1	Csa2G381730.1.utr5p1	five_prime_UTR
Csa2G381730.1.utr5p2	Csa2G381730.1.utr5p2	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa2G381730.1.cds2	Csa2G381730.1.cds2	CDS
Csa2G381730.1.cds3	Csa2G381730.1.cds3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa2G381730.1.utr3p1	Csa2G381730.1.utr3p1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007855	RNA-dependent RNA polymerase, eukaryotic-type	PANTHER	PTHR23079	RNA-DEPENDENT RNA POLYMERASE	coord: 1..1197 score:
IPR007855	RNA-dependent RNA polymerase, eukaryotic-type	PFAM	PF05183	RdRP	coord: 417..999 score: 1.4E
None	No IPR available	PANTHER	PTHR23079:SF1	PROTEIN RRF-3	coord: 1..1197 score: