Csa2G138720 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGATTATTATTCGTGGGATTATTCTTGTTTTGATGATGATGATATTTGTAAGAGGGAATGAAGGTGAACCTTATAGAAGAGTAGGAAGTAAGAAATTTGCATGGAAGACTTTAATTGTTGACAAGAAAGGCCATGGAAATTTCTCTACTATTCAAGCTGCCATTGATTCTGTTCCTTCTAATAATCGATTTTGGGTCTCCATTCATATTCGACCTGGTCTTTACAGGTATTTTTTTTTTCTAATTTTGAATTCTTATTTAATATAGTTTTGATTTTTACTAAGAGTGCTTTTTTTATTCAAATATTTGAAACAAAGAATATATTAAGTGGGTCTGATTTTAGTTGGTTTAGGTTTTTGTTAGTGCATCACTAGTTTGATATTTTGAGGGGTTTGTTATTATGATTACTTTGGATTGATGGGTTGGTTCATCTTCAATTAAGTTGGTAGAGCAAGTGATTTGATTTTCATTATAATTATTTTTTAATAACTAGATTATAAAATGTCAATTAGGTTTCATTTCTTAAGTAAAAAAGATTGAGGCTATTGATTTTTTTGAAAATACAGATTATAAATACTCTTACGCTTTCTTTGTTTTGTTATATGATGATCTCACTTTTTGGAACTATTTTCAAAATCTAAGCTAAATTATTGAAAACTGAGGGTGTTTTTGCTTTTGAAATTTGGTTTATTTAAAATTCAATGTGTGAAAATCAAATCTGTTTTAATAAACAGTAAGAAACCCAGTGCAATTTCCAAATGTGTGTGTGTGTATATATATATATAATTAACTATTTGGTTTCTAAAATTTGCTTTCTCCATCCAAGTTTTTGGAAATTTTGTTTAGTTTTCAAAATTTTCGCTTTGATTTCAGAAACAGAATATTACATGTTTTGTATAGGCTAAAATTTTAAAGATACATATATAAAACAAAATAGTCAATTAAACAGTGATTATATATTTGCATCTATTTTCGATTATTTCCTAAAATAAATTAAGGAAATCTACTGTAATCAATGACAATTATTCTGTTAAAAATTAATATACGATGGAGGTTGATTTTGCTATATTTCCCTAATTTGTTTTTGTATACAGAGAGAAGGTGAAGATTCCATATGATAAACCATATATAATTTTGAAAGGACATAGAAAAAGAAGAACAAAGGTTGTTTGGGACGATCATCTCACTGTTGCTCAAAGCCCTACTTTCACTTCTTCAGCTGATAATATTGTCGTCAAATCCATCTCTTTTGTGGTGAGTAAAGTTTTTAAATTATATAAACTCAAAAGATAAACAAAACTTGATTATAGAAACCCAAATTGTTTGTTACTAGAATTCCTATAATTATCCATGGAAAAATGGAAATCCAAGAGTCCCAGCAGTGGCAGCAATGATCACAGGCGACAAGTCGTCTTTCTATAGATGTGGTTTCTATGGAGTTCAAGACACATTGTGGGATAATCAAGGACGACATTACTATCATCGTTGCACCATTCAAGGAGCTGTCGACTTTATTTTTGGAGCTGCTCAGTCCATTTTTCAGGTTTTTTTTCTTTTCATCCCTACCAATTTGAGTCCTACTTCTTAG ATGTGGATTATTATTCGTGGGATTATTCTTGTTTTGATGATGATGATATTTGTAAGAGGGAATGAAGGTGAACCTTATAGAAGAGTAGGAAGTAAGAAATTTGCATGGAAGACTTTAATTGTTGACAAGAAAGGCCATGGAAATTTCTCTACTATTCAAGCTGCCATTGATTCTGTTCCTTCTAATAATCGATTTTGGGTCTCCATTCATATTCGACCTGGTCTTTACAGAGAGAAGGTGAAGATTCCATATGATAAACCATATATAATTTTGAAAGGACATAGAAAAAGAAGAACAAAGGTTGTTTGGGACGATCATCTCACTGTTGCTCAAAGCCCTACTTTCACTTCTTCAGCTGATAATATTGTCGTCAAATCCATCTCTTTTGTGAATTCCTATAATTATCCATGGAAAAATGGAAATCCAAGAGTCCCAGCAGTGGCAGCAATGATCACAGGCGACAAGTCGTCTTTCTATAGATGTGGTTTCTATGGAGTTCAAGACACATTGTGGGATAATCAAGGACGACATTACTATCATCGTTGCACCATTCAAGGAGCTGTCGACTTTATTTTTGGAGCTGCTCAGTCCATTTTTCAGGTTTTTTTTCTTTTCATCCCTACCAATTTGAGTCCTACTTCTTAG ATGTGGATTATTATTCGTGGGATTATTCTTGTTTTGATGATGATGATATTTGTAAGAGGGAATGAAGGTGAACCTTATAGAAGAGTAGGAAGTAAGAAATTTGCATGGAAGACTTTAATTGTTGACAAGAAAGGCCATGGAAATTTCTCTACTATTCAAGCTGCCATTGATTCTGTTCCTTCTAATAATCGATTTTGGGTCTCCATTCATATTCGACCTGGTCTTTACAGAGAGAAGGTGAAGATTCCATATGATAAACCATATATAATTTTGAAAGGACATAGAAAAAGAAGAACAAAGGTTGTTTGGGACGATCATCTCACTGTTGCTCAAAGCCCTACTTTCACTTCTTCAGCTGATAATATTGTCGTCAAATCCATCTCTTTTGTGAATTCCTATAATTATCCATGGAAAAATGGAAATCCAAGAGTCCCAGCAGTGGCAGCAATGATCACAGGCGACAAGTCGTCTTTCTATAGATGTGGTTTCTATGGAGTTCAAGACACATTGTGGGATAATCAAGGACGACATTACTATCATCGTTGCACCATTCAAGGAGCTGTCGACTTTATTTTTGGAGCTGCTCAGTCCATTTTTCAGGTTTTTTTTCTTTTCATCCCTACCAATTTGAGTCCTACTTCTTAG MWIIIRGIILVLMMMIFVRGNEGEPYRRVGSKKFAWKTLIVDKKGHGNFSTIQAAIDSVPSNNRFWVSIHIRPGLYREKVKIPYDKPYIILKGHRKRRTKVVWDDHLTVAQSPTFTSSADNIVVKSISFVNSYNYPWKNGNPRVPAVAAMITGDKSSFYRCGFYGVQDTLWDNQGRHYYHRCTIQGAVDFIFGAAQSIFQVFFLFIPTNLSPTS*
BLAST of Csa2G138720 vs. Swiss-Prot
Match: PME29_ARATH (Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 1.1e-62 Identity = 113/165 (68.48%), Postives = 132/165 (80.00%), Query Frame = 1
BLAST of Csa2G138720 vs. Swiss-Prot
Match: PME55_ARATH (Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 5.7e-59 Identity = 107/165 (64.85%), Postives = 127/165 (76.97%), Query Frame = 1
BLAST of Csa2G138720 vs. Swiss-Prot
Match: PME66_ARATH (Probable pectinesterase 66 OS=Arabidopsis thaliana GN=PME66 PE=2 SV=2) HSP 1 Score: 159.8 bits (403), Expect = 3.2e-38 Identity = 83/193 (43.01%), Postives = 118/193 (61.14%), Query Frame = 1
BLAST of Csa2G138720 vs. Swiss-Prot
Match: PME10_ARATH (Putative pectinesterase 10 OS=Arabidopsis thaliana GN=PME10 PE=2 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 8.0e-37 Identity = 82/183 (44.81%), Postives = 106/183 (57.92%), Query Frame = 1
BLAST of Csa2G138720 vs. Swiss-Prot
Match: PME67_ARATH (Probable pectinesterase 67 OS=Arabidopsis thaliana GN=PME67 PE=2 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 9.1e-33 Identity = 72/174 (41.38%), Postives = 109/174 (62.64%), Query Frame = 1
BLAST of Csa2G138720 vs. TrEMBL
Match: A0A0A0LI69_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_2G138720 PE=4 SV=1) HSP 1 Score: 447.2 bits (1149), Expect = 1.1e-122 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 1
BLAST of Csa2G138720 vs. TrEMBL
Match: W9SM62_9ROSA (Pectinesterase OS=Morus notabilis GN=L484_021593 PE=4 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 3.8e-70 Identity = 128/187 (68.45%), Postives = 154/187 (82.35%), Query Frame = 1
BLAST of Csa2G138720 vs. TrEMBL
Match: B9RWI7_RICCO (Pectinesterase OS=Ricinus communis GN=RCOM_1019830 PE=4 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 3.6e-68 Identity = 121/170 (71.18%), Postives = 149/170 (87.65%), Query Frame = 1
BLAST of Csa2G138720 vs. TrEMBL
Match: M5Y357_PRUPE (Pectinesterase OS=Prunus persica GN=PRUPE_ppa020682mg PE=4 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 6.1e-68 Identity = 125/170 (73.53%), Postives = 145/170 (85.29%), Query Frame = 1
BLAST of Csa2G138720 vs. TrEMBL
Match: B9IJH0_POPTR (Pectinesterase OS=Populus trichocarpa GN=POPTR_0017s08180g PE=4 SV=2) HSP 1 Score: 265.0 bits (676), Expect = 7.9e-68 Identity = 121/164 (73.78%), Postives = 145/164 (88.41%), Query Frame = 1
BLAST of Csa2G138720 vs. TAIR10
Match: AT3G24130.1 (AT3G24130.1 Pectin lyase-like superfamily protein) HSP 1 Score: 241.1 bits (614), Expect = 6.2e-64 Identity = 113/165 (68.48%), Postives = 132/165 (80.00%), Query Frame = 1
BLAST of Csa2G138720 vs. TAIR10
Match: AT5G18990.1 (AT5G18990.1 Pectin lyase-like superfamily protein) HSP 1 Score: 228.8 bits (582), Expect = 3.2e-60 Identity = 107/165 (64.85%), Postives = 127/165 (76.97%), Query Frame = 1
BLAST of Csa2G138720 vs. TAIR10
Match: AT2G47280.1 (AT2G47280.1 Pectin lyase-like superfamily protein) HSP 1 Score: 159.8 bits (403), Expect = 1.8e-39 Identity = 83/193 (43.01%), Postives = 118/193 (61.14%), Query Frame = 1
BLAST of Csa2G138720 vs. TAIR10
Match: AT2G19150.1 (AT2G19150.1 Pectin lyase-like superfamily protein) HSP 1 Score: 155.2 bits (391), Expect = 4.5e-38 Identity = 82/183 (44.81%), Postives = 106/183 (57.92%), Query Frame = 1
BLAST of Csa2G138720 vs. TAIR10
Match: AT3G17060.1 (AT3G17060.1 Pectin lyase-like superfamily protein) HSP 1 Score: 141.7 bits (356), Expect = 5.1e-34 Identity = 72/174 (41.38%), Postives = 109/174 (62.64%), Query Frame = 1
BLAST of Csa2G138720 vs. NCBI nr
Match: gi|700206349|gb|KGN61468.1| (hypothetical protein Csa_2G138720 [Cucumis sativus]) HSP 1 Score: 447.2 bits (1149), Expect = 1.6e-122 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 1
BLAST of Csa2G138720 vs. NCBI nr
Match: gi|778674132|ref|XP_011650140.1| (PREDICTED: probable pectinesterase 29 [Cucumis sativus]) HSP 1 Score: 419.5 bits (1077), Expect = 3.6e-114 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 1
BLAST of Csa2G138720 vs. NCBI nr
Match: gi|659114888|ref|XP_008457276.1| (PREDICTED: probable pectinesterase 29 [Cucumis melo]) HSP 1 Score: 397.1 bits (1019), Expect = 1.9e-107 Identity = 190/200 (95.00%), Postives = 193/200 (96.50%), Query Frame = 1
BLAST of Csa2G138720 vs. NCBI nr
Match: gi|703142522|ref|XP_010107773.1| (putative pectinesterase 29 [Morus notabilis]) HSP 1 Score: 272.7 bits (696), Expect = 5.5e-70 Identity = 128/187 (68.45%), Postives = 154/187 (82.35%), Query Frame = 1
BLAST of Csa2G138720 vs. NCBI nr
Match: gi|223542702|gb|EEF44239.1| (Pectinesterase U1 precursor, putative [Ricinus communis]) HSP 1 Score: 266.2 bits (679), Expect = 5.1e-68 Identity = 121/170 (71.18%), Postives = 149/170 (87.65%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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