Csa2G138720 (gene) Cucumber (Chinese Long) v2

NameCsa2G138720
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPectinesterase; contains IPR011050 (Pectin lyase fold/virulence factor)
LocationChr2 : 8536240 .. 8537830 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGATTATTATTCGTGGGATTATTCTTGTTTTGATGATGATGATATTTGTAAGAGGGAATGAAGGTGAACCTTATAGAAGAGTAGGAAGTAAGAAATTTGCATGGAAGACTTTAATTGTTGACAAGAAAGGCCATGGAAATTTCTCTACTATTCAAGCTGCCATTGATTCTGTTCCTTCTAATAATCGATTTTGGGTCTCCATTCATATTCGACCTGGTCTTTACAGGTATTTTTTTTTTCTAATTTTGAATTCTTATTTAATATAGTTTTGATTTTTACTAAGAGTGCTTTTTTTATTCAAATATTTGAAACAAAGAATATATTAAGTGGGTCTGATTTTAGTTGGTTTAGGTTTTTGTTAGTGCATCACTAGTTTGATATTTTGAGGGGTTTGTTATTATGATTACTTTGGATTGATGGGTTGGTTCATCTTCAATTAAGTTGGTAGAGCAAGTGATTTGATTTTCATTATAATTATTTTTTAATAACTAGATTATAAAATGTCAATTAGGTTTCATTTCTTAAGTAAAAAAGATTGAGGCTATTGATTTTTTTGAAAATACAGATTATAAATACTCTTACGCTTTCTTTGTTTTGTTATATGATGATCTCACTTTTTGGAACTATTTTCAAAATCTAAGCTAAATTATTGAAAACTGAGGGTGTTTTTGCTTTTGAAATTTGGTTTATTTAAAATTCAATGTGTGAAAATCAAATCTGTTTTAATAAACAGTAAGAAACCCAGTGCAATTTCCAAATGTGTGTGTGTGTATATATATATATAATTAACTATTTGGTTTCTAAAATTTGCTTTCTCCATCCAAGTTTTTGGAAATTTTGTTTAGTTTTCAAAATTTTCGCTTTGATTTCAGAAACAGAATATTACATGTTTTGTATAGGCTAAAATTTTAAAGATACATATATAAAACAAAATAGTCAATTAAACAGTGATTATATATTTGCATCTATTTTCGATTATTTCCTAAAATAAATTAAGGAAATCTACTGTAATCAATGACAATTATTCTGTTAAAAATTAATATACGATGGAGGTTGATTTTGCTATATTTCCCTAATTTGTTTTTGTATACAGAGAGAAGGTGAAGATTCCATATGATAAACCATATATAATTTTGAAAGGACATAGAAAAAGAAGAACAAAGGTTGTTTGGGACGATCATCTCACTGTTGCTCAAAGCCCTACTTTCACTTCTTCAGCTGATAATATTGTCGTCAAATCCATCTCTTTTGTGGTGAGTAAAGTTTTTAAATTATATAAACTCAAAAGATAAACAAAACTTGATTATAGAAACCCAAATTGTTTGTTACTAGAATTCCTATAATTATCCATGGAAAAATGGAAATCCAAGAGTCCCAGCAGTGGCAGCAATGATCACAGGCGACAAGTCGTCTTTCTATAGATGTGGTTTCTATGGAGTTCAAGACACATTGTGGGATAATCAAGGACGACATTACTATCATCGTTGCACCATTCAAGGAGCTGTCGACTTTATTTTTGGAGCTGCTCAGTCCATTTTTCAGGTTTTTTTTCTTTTCATCCCTACCAATTTGAGTCCTACTTCTTAG

mRNA sequence

ATGTGGATTATTATTCGTGGGATTATTCTTGTTTTGATGATGATGATATTTGTAAGAGGGAATGAAGGTGAACCTTATAGAAGAGTAGGAAGTAAGAAATTTGCATGGAAGACTTTAATTGTTGACAAGAAAGGCCATGGAAATTTCTCTACTATTCAAGCTGCCATTGATTCTGTTCCTTCTAATAATCGATTTTGGGTCTCCATTCATATTCGACCTGGTCTTTACAGAGAGAAGGTGAAGATTCCATATGATAAACCATATATAATTTTGAAAGGACATAGAAAAAGAAGAACAAAGGTTGTTTGGGACGATCATCTCACTGTTGCTCAAAGCCCTACTTTCACTTCTTCAGCTGATAATATTGTCGTCAAATCCATCTCTTTTGTGAATTCCTATAATTATCCATGGAAAAATGGAAATCCAAGAGTCCCAGCAGTGGCAGCAATGATCACAGGCGACAAGTCGTCTTTCTATAGATGTGGTTTCTATGGAGTTCAAGACACATTGTGGGATAATCAAGGACGACATTACTATCATCGTTGCACCATTCAAGGAGCTGTCGACTTTATTTTTGGAGCTGCTCAGTCCATTTTTCAGGTTTTTTTTCTTTTCATCCCTACCAATTTGAGTCCTACTTCTTAG

Coding sequence (CDS)

ATGTGGATTATTATTCGTGGGATTATTCTTGTTTTGATGATGATGATATTTGTAAGAGGGAATGAAGGTGAACCTTATAGAAGAGTAGGAAGTAAGAAATTTGCATGGAAGACTTTAATTGTTGACAAGAAAGGCCATGGAAATTTCTCTACTATTCAAGCTGCCATTGATTCTGTTCCTTCTAATAATCGATTTTGGGTCTCCATTCATATTCGACCTGGTCTTTACAGAGAGAAGGTGAAGATTCCATATGATAAACCATATATAATTTTGAAAGGACATAGAAAAAGAAGAACAAAGGTTGTTTGGGACGATCATCTCACTGTTGCTCAAAGCCCTACTTTCACTTCTTCAGCTGATAATATTGTCGTCAAATCCATCTCTTTTGTGAATTCCTATAATTATCCATGGAAAAATGGAAATCCAAGAGTCCCAGCAGTGGCAGCAATGATCACAGGCGACAAGTCGTCTTTCTATAGATGTGGTTTCTATGGAGTTCAAGACACATTGTGGGATAATCAAGGACGACATTACTATCATCGTTGCACCATTCAAGGAGCTGTCGACTTTATTTTTGGAGCTGCTCAGTCCATTTTTCAGGTTTTTTTTCTTTTCATCCCTACCAATTTGAGTCCTACTTCTTAG

Protein sequence

MWIIIRGIILVLMMMIFVRGNEGEPYRRVGSKKFAWKTLIVDKKGHGNFSTIQAAIDSVPSNNRFWVSIHIRPGLYREKVKIPYDKPYIILKGHRKRRTKVVWDDHLTVAQSPTFTSSADNIVVKSISFVNSYNYPWKNGNPRVPAVAAMITGDKSSFYRCGFYGVQDTLWDNQGRHYYHRCTIQGAVDFIFGAAQSIFQVFFLFIPTNLSPTS*
BLAST of Csa2G138720 vs. Swiss-Prot
Match: PME29_ARATH (Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.1e-62
Identity = 113/165 (68.48%), Postives = 132/165 (80.00%), Query Frame = 1

Query: 39  LIVDKKGHGNFSTIQAAIDSVPSNNRFWVSIHIRPGLYREKVKIPYDKPYIILKGHRKRR 98
           + VD+ GHGNF+TIQ AIDSVP NNR W  I+++ GLYREK+KIPY+KP+I+L G  KR 
Sbjct: 34  VFVDQSGHGNFTTIQKAIDSVPINNRHWFFINVKAGLYREKIKIPYEKPFIVLVGAGKRL 93

Query: 99  TKVVWDDHLTVAQSPTFTSSADNIVVKSISFVNSYNYPWK---NGNPRVPAVAAMITGDK 158
           T+V WDDH +VAQSPTF++ ADN VVKSI+F NSYN+P K   N NPR PAVAA+I GDK
Sbjct: 94  TRVEWDDHYSVAQSPTFSTLADNTVVKSITFANSYNFPSKGKMNKNPRTPAVAALIGGDK 153

Query: 159 SSFYRCGFYGVQDTLWDNQGRHYYHRCTIQGAVDFIFGAAQSIFQ 201
           S+FY  GF G+QDTLWD  GRHY+HRCTIQGAVDFIFG  QSI+Q
Sbjct: 154 SAFYSVGFAGIQDTLWDFDGRHYFHRCTIQGAVDFIFGTGQSIYQ 198

BLAST of Csa2G138720 vs. Swiss-Prot
Match: PME55_ARATH (Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 5.7e-59
Identity = 107/165 (64.85%), Postives = 127/165 (76.97%), Query Frame = 1

Query: 39  LIVDKKGHGNFSTIQAAIDSVPSNNRFWVSIHIRPGLYREKVKIPYDKPYIILKGHRKRR 98
           +IVD+ GHGNF+TIQ AIDSVP NN  W  I+++ GLYREK+ IP  KP+I++ G  KR 
Sbjct: 29  VIVDQSGHGNFTTIQKAIDSVPINNTHWFFINVKAGLYREKITIPQKKPFIVIVGAGKRS 88

Query: 99  TKVVWDDHLTVAQSPTFTSSADNIVVKSISFVNSYNYPWK---NGNPRVPAVAAMITGDK 158
           T+V WDDH ++AQSPTF + ADN VVK I+F NSYN+P     N NPRVPAVAA I GDK
Sbjct: 89  TRVEWDDHASLAQSPTFATLADNTVVKKITFANSYNFPSNGKINKNPRVPAVAAFIGGDK 148

Query: 159 SSFYRCGFYGVQDTLWDNQGRHYYHRCTIQGAVDFIFGAAQSIFQ 201
           S+FY  GF G+QDTLWD+ GRHY+HRCTIQGAVDFI G+ QSI+Q
Sbjct: 149 SAFYSVGFAGIQDTLWDSDGRHYFHRCTIQGAVDFILGSGQSIYQ 193

BLAST of Csa2G138720 vs. Swiss-Prot
Match: PME66_ARATH (Probable pectinesterase 66 OS=Arabidopsis thaliana GN=PME66 PE=2 SV=2)

HSP 1 Score: 159.8 bits (403), Expect = 3.2e-38
Identity = 83/193 (43.01%), Postives = 118/193 (61.14%), Query Frame = 1

Query: 8   IILVLMMMIFVRGNEGEPYRRVGSKKFAWKTLIVDKKGHGNFSTIQAAIDSVPSNNRFWV 67
           I+ +++M +FV G          +++ A+ T+ VD  G GNF+T+Q+AIDS+   N  W+
Sbjct: 11  IVCMVVMTLFVYGYSA------AAEQIAY-TITVDLNGGGNFTTVQSAIDSISPPNHNWI 70

Query: 68  SIHIRPGLYREKVKIPYDKPYIILKGHRKRRTKVVWDDHLTVAQSPTFTSSADNIVVKSI 127
            +  + G+YREKV IP +K +I L+G    +T + +DDH     S TFT+ AD+IV+  I
Sbjct: 71  RVFTQNGIYREKVTIPKEKGFIYLQGKGIEQTVIEYDDHQATDISATFTAFADDIVISGI 130

Query: 128 SFVNSYNYPWKNGNPRVPAVAAMITGDKSSFYRCGFYGVQDTLWDNQGRHYYHRCTIQGA 187
           +F N+YN    N    VPAVAA + GD+       F G+QDTL+D +GRHYY RC I G 
Sbjct: 131 TFKNTYNIVPNNKREIVPAVAARMLGDRYVVTDSSFVGLQDTLFDGKGRHYYKRCIISGG 190

Query: 188 VDFIFGAAQSIFQ 201
           +DFIFG  QS+F+
Sbjct: 191 IDFIFGYGQSLFK 196

BLAST of Csa2G138720 vs. Swiss-Prot
Match: PME10_ARATH (Putative pectinesterase 10 OS=Arabidopsis thaliana GN=PME10 PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 8.0e-37
Identity = 82/183 (44.81%), Postives = 106/183 (57.92%), Query Frame = 1

Query: 30  GSKKFAWKTLIVDKKGHGNFSTIQAAIDSVPSNNRFWVSIHIRPGLYREKVKIPYDKPYI 89
           GS     KT+IV+      F T+Q+AIDS+P  N+ W+ I I  G+Y EKV IP  K YI
Sbjct: 32  GSSSQIAKTIIVNPNDARYFKTVQSAIDSIPLQNQDWIRILISNGIYSEKVTIPRGKGYI 91

Query: 90  ILKGHRKRRTKVVWDDHLTVAQSPTFTSSADNIVVKSISFVNSYNYPWKNGNPRVPAVAA 149
            ++G    +T + + DH     S TFTS   NI++  I+F N YN    + +P  PAVAA
Sbjct: 92  YMQGGGIEKTIIAYGDHQLTNTSATFTSYPSNIIITGITFKNKYNIA-SSSSPTKPAVAA 151

Query: 150 MITGDKSSFYRCGFYGVQDTLWDNQGRHYYHRCTIQGAVDFIFGAAQSIFQVFFLFIPTN 209
           M+ GDK +     F G QDTL+D+ GRHYY RC I G +DFIFG AQSIF+   L +   
Sbjct: 152 MMLGDKYAIIDSSFDGFQDTLYDDYGRHYYKRCVISGGIDFIFGGAQSIFEGCTLKLRVG 211

Query: 210 LSP 213
           + P
Sbjct: 212 IYP 213

BLAST of Csa2G138720 vs. Swiss-Prot
Match: PME67_ARATH (Probable pectinesterase 67 OS=Arabidopsis thaliana GN=PME67 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 9.1e-33
Identity = 72/174 (41.38%), Postives = 109/174 (62.64%), Query Frame = 1

Query: 37  KTLIVDKKGHGNFSTIQAAIDSVPSNNRFWVSIHIRPGLYREKVKIPYDKPYIILKGHRK 96
           +++IVD +G G+++++Q AID+VP  N  W+ +H+R G+Y+E+V IP +KP+I ++G+ K
Sbjct: 44  RSIIVDIEGKGDYTSVQKAIDAVPVGNSNWIIVHVRKGIYKERVHIPENKPFIFMRGNGK 103

Query: 97  RRTKVVWDDHLTV--AQSPTFTSSADNIVVKSISFVNS--YNYPWKNGNPRVPAVAAMIT 156
            +T V+     +V    S TF   A++ V   IS  N       + + N    +VAA + 
Sbjct: 104 GKT-VIESSQSSVDNVASATFKVEANHFVAFGISIRNDAPVGMAFTSENQ---SVAAFVA 163

Query: 157 GDKSSFYRCGFYGVQDTLWDNQGRHYYHRCTIQGAVDFIFGAAQSIFQVFFLFI 207
            DK +FY C FY + +TL+DN+GRHYYH C IQG++DFIFG A SIF    +F+
Sbjct: 164 ADKVAFYHCAFYSLHNTLFDNKGRHYYHECYIQGSIDFIFGRATSIFNNCEIFV 213

BLAST of Csa2G138720 vs. TrEMBL
Match: A0A0A0LI69_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_2G138720 PE=4 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 1.1e-122
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 1

Query: 1   MWIIIRGIILVLMMMIFVRGNEGEPYRRVGSKKFAWKTLIVDKKGHGNFSTIQAAIDSVP 60
           MWIIIRGIILVLMMMIFVRGNEGEPYRRVGSKKFAWKTLIVDKKGHGNFSTIQAAIDSVP
Sbjct: 1   MWIIIRGIILVLMMMIFVRGNEGEPYRRVGSKKFAWKTLIVDKKGHGNFSTIQAAIDSVP 60

Query: 61  SNNRFWVSIHIRPGLYREKVKIPYDKPYIILKGHRKRRTKVVWDDHLTVAQSPTFTSSAD 120
           SNNRFWVSIHIRPGLYREKVKIPYDKPYIILKGHRKRRTKVVWDDHLTVAQSPTFTSSAD
Sbjct: 61  SNNRFWVSIHIRPGLYREKVKIPYDKPYIILKGHRKRRTKVVWDDHLTVAQSPTFTSSAD 120

Query: 121 NIVVKSISFVNSYNYPWKNGNPRVPAVAAMITGDKSSFYRCGFYGVQDTLWDNQGRHYYH 180
           NIVVKSISFVNSYNYPWKNGNPRVPAVAAMITGDKSSFYRCGFYGVQDTLWDNQGRHYYH
Sbjct: 121 NIVVKSISFVNSYNYPWKNGNPRVPAVAAMITGDKSSFYRCGFYGVQDTLWDNQGRHYYH 180

Query: 181 RCTIQGAVDFIFGAAQSIFQVFFLFIPTNLSPTS 215
           RCTIQGAVDFIFGAAQSIFQVFFLFIPTNLSPTS
Sbjct: 181 RCTIQGAVDFIFGAAQSIFQVFFLFIPTNLSPTS 214

BLAST of Csa2G138720 vs. TrEMBL
Match: W9SM62_9ROSA (Pectinesterase OS=Morus notabilis GN=L484_021593 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 3.8e-70
Identity = 128/187 (68.45%), Postives = 154/187 (82.35%), Query Frame = 1

Query: 14  MMIFVRGNEGEPYRRVGSKKFAWKTLIVDKKGHGNFSTIQAAIDSVPSNNRFWVSIHIRP 73
           M++ +    G+ YR+VG KKFA+ T+ VD  G GNFSTIQ+AI+SVPSNN++WV I I+ 
Sbjct: 1   MVLSLGQANGQWYRKVGYKKFAYYTITVDPSGQGNFSTIQSAINSVPSNNKYWVCIRIKA 60

Query: 74  GLYREKVKIPYDKPYIILKGHRKRRTKVVWDDHLTVAQSPTFTSSADNIVVKSISFVNSY 133
           G+YREK+KIPYDKPYIILKG  +R+T+VVWDDH T+AQSPTFTS ADNIV K +SF NSY
Sbjct: 61  GIYREKIKIPYDKPYIILKGEGRRKTQVVWDDHDTLAQSPTFTSLADNIVAKCMSFTNSY 120

Query: 134 NYPWKNGNPRVPAVAAMITGDKSSFYRCGFYGVQDTLWDNQGRHYYHRCTIQGAVDFIFG 193
           N P  N  PR PA AAMITGDK+ F+RCGF+G+QDTLWD+QGRHYY  CTIQGAVDFIFG
Sbjct: 121 NRP-PNDKPRAPAAAAMITGDKTKFFRCGFFGLQDTLWDDQGRHYYKLCTIQGAVDFIFG 180

Query: 194 AAQSIFQ 201
           + QSIF+
Sbjct: 181 SGQSIFE 186

BLAST of Csa2G138720 vs. TrEMBL
Match: B9RWI7_RICCO (Pectinesterase OS=Ricinus communis GN=RCOM_1019830 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 3.6e-68
Identity = 121/170 (71.18%), Postives = 149/170 (87.65%), Query Frame = 1

Query: 31  SKKFAWKTLIVDKKGHGNFSTIQAAIDSVPSNNRFWVSIHIRPGLYREKVKIPYDKPYII 90
           +KKF + +++VD+ GHGNFST+Q+AIDSVPSNN+ W+ I+I+ G+YREKVKIPYD+PYII
Sbjct: 40  NKKFPYVSVLVDQSGHGNFSTVQSAIDSVPSNNKNWICIYIKAGIYREKVKIPYDRPYII 99

Query: 91  LKGHRKRRTKVVWDDHLTVAQSPTFTSSADNIVVKSISFVNSYNYPWKNGNPRVPAVAAM 150
           LKG  KRRT+++WDDH + AQSPTF S ADNI+VKSI FVNSYN+   + NPRVPAVAAM
Sbjct: 100 LKGEAKRRTQIIWDDHDSTAQSPTFMSLADNIIVKSIRFVNSYNF-LNSNNPRVPAVAAM 159

Query: 151 ITGDKSSFYRCGFYGVQDTLWDNQGRHYYHRCTIQGAVDFIFGAAQSIFQ 201
           I GDKS+FYRCGF GVQDTLWD+QGRHY+ +CTIQGAVDFIFG+ QSI++
Sbjct: 160 IAGDKSAFYRCGFAGVQDTLWDDQGRHYFKKCTIQGAVDFIFGSGQSIYE 208

BLAST of Csa2G138720 vs. TrEMBL
Match: M5Y357_PRUPE (Pectinesterase OS=Prunus persica GN=PRUPE_ppa020682mg PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 6.1e-68
Identity = 125/170 (73.53%), Postives = 145/170 (85.29%), Query Frame = 1

Query: 31  SKKFAWKTLIVDKKGHGNFSTIQAAIDSVPSNNRFWVSIHIRPGLYREKVKIPYDKPYII 90
           +KK A+ T+ VD+ GHGNF++IQ+AID+VP NNR WVSI I+ G Y+EKV IP DKPYII
Sbjct: 8   NKKLAYYTITVDQSGHGNFTSIQSAIDAVPINNRNWVSIKIKAGTYKEKVIIPVDKPYII 67

Query: 91  LKGHRKRRTKVVWDDHLTVAQSPTFTSSADNIVVKSISFVNSYNYPWKNGNPRVPAVAAM 150
           LKG  + +T++VWDDH +VAQSPTF S AD+I+VKSISFVNSYN P  N NPRV AVAAM
Sbjct: 68  LKGENRHKTQIVWDDHDSVAQSPTFASYADSIIVKSISFVNSYNNPVNNKNPRVAAVAAM 127

Query: 151 ITGDKSSFYRCGFYGVQDTLWDNQGRHYYHRCTIQGAVDFIFGAAQSIFQ 201
           I GDKSSFYRCGF+G+QDTLWD QGRHYYH CTIQGAVDFIFG+AQSIFQ
Sbjct: 128 IYGDKSSFYRCGFFGLQDTLWDGQGRHYYHLCTIQGAVDFIFGSAQSIFQ 177

BLAST of Csa2G138720 vs. TrEMBL
Match: B9IJH0_POPTR (Pectinesterase OS=Populus trichocarpa GN=POPTR_0017s08180g PE=4 SV=2)

HSP 1 Score: 265.0 bits (676), Expect = 7.9e-68
Identity = 121/164 (73.78%), Postives = 145/164 (88.41%), Query Frame = 1

Query: 37  KTLIVDKKGHGNFSTIQAAIDSVPSNNRFWVSIHIRPGLYREKVKIPYDKPYIILKGHRK 96
           +TL++DK GHGNFS+IQ+AIDS+PS+N+ WV IH+R G YREKVKIPY+KPYIIL+G  K
Sbjct: 21  RTLLIDKSGHGNFSSIQSAIDSMPSDNKNWVCIHVRAGTYREKVKIPYNKPYIILRGEGK 80

Query: 97  RRTKVVWDDHLTVAQSPTFTSSADNIVVKSISFVNSYNYPWKNGNPRVPAVAAMITGDKS 156
           RRTK+VWDDH + AQSPTF S ADNIVV+SI+FVNSYN+P  N NPR+PAVAAMITGDK+
Sbjct: 81  RRTKIVWDDHFSTAQSPTFVSLADNIVVRSITFVNSYNFPHDN-NPRLPAVAAMITGDKT 140

Query: 157 SFYRCGFYGVQDTLWDNQGRHYYHRCTIQGAVDFIFGAAQSIFQ 201
           +FY+CGF GVQDTLWD  GRHY+ RCTIQGAVDFIFG+ QSI++
Sbjct: 141 AFYQCGFAGVQDTLWDEAGRHYFKRCTIQGAVDFIFGSGQSIYE 183

BLAST of Csa2G138720 vs. TAIR10
Match: AT3G24130.1 (AT3G24130.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 241.1 bits (614), Expect = 6.2e-64
Identity = 113/165 (68.48%), Postives = 132/165 (80.00%), Query Frame = 1

Query: 39  LIVDKKGHGNFSTIQAAIDSVPSNNRFWVSIHIRPGLYREKVKIPYDKPYIILKGHRKRR 98
           + VD+ GHGNF+TIQ AIDSVP NNR W  I+++ GLYREK+KIPY+KP+I+L G  KR 
Sbjct: 34  VFVDQSGHGNFTTIQKAIDSVPINNRHWFFINVKAGLYREKIKIPYEKPFIVLVGAGKRL 93

Query: 99  TKVVWDDHLTVAQSPTFTSSADNIVVKSISFVNSYNYPWK---NGNPRVPAVAAMITGDK 158
           T+V WDDH +VAQSPTF++ ADN VVKSI+F NSYN+P K   N NPR PAVAA+I GDK
Sbjct: 94  TRVEWDDHYSVAQSPTFSTLADNTVVKSITFANSYNFPSKGKMNKNPRTPAVAALIGGDK 153

Query: 159 SSFYRCGFYGVQDTLWDNQGRHYYHRCTIQGAVDFIFGAAQSIFQ 201
           S+FY  GF G+QDTLWD  GRHY+HRCTIQGAVDFIFG  QSI+Q
Sbjct: 154 SAFYSVGFAGIQDTLWDFDGRHYFHRCTIQGAVDFIFGTGQSIYQ 198

BLAST of Csa2G138720 vs. TAIR10
Match: AT5G18990.1 (AT5G18990.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 228.8 bits (582), Expect = 3.2e-60
Identity = 107/165 (64.85%), Postives = 127/165 (76.97%), Query Frame = 1

Query: 39  LIVDKKGHGNFSTIQAAIDSVPSNNRFWVSIHIRPGLYREKVKIPYDKPYIILKGHRKRR 98
           +IVD+ GHGNF+TIQ AIDSVP NN  W  I+++ GLYREK+ IP  KP+I++ G  KR 
Sbjct: 29  VIVDQSGHGNFTTIQKAIDSVPINNTHWFFINVKAGLYREKITIPQKKPFIVIVGAGKRS 88

Query: 99  TKVVWDDHLTVAQSPTFTSSADNIVVKSISFVNSYNYPWK---NGNPRVPAVAAMITGDK 158
           T+V WDDH ++AQSPTF + ADN VVK I+F NSYN+P     N NPRVPAVAA I GDK
Sbjct: 89  TRVEWDDHASLAQSPTFATLADNTVVKKITFANSYNFPSNGKINKNPRVPAVAAFIGGDK 148

Query: 159 SSFYRCGFYGVQDTLWDNQGRHYYHRCTIQGAVDFIFGAAQSIFQ 201
           S+FY  GF G+QDTLWD+ GRHY+HRCTIQGAVDFI G+ QSI+Q
Sbjct: 149 SAFYSVGFAGIQDTLWDSDGRHYFHRCTIQGAVDFILGSGQSIYQ 193

BLAST of Csa2G138720 vs. TAIR10
Match: AT2G47280.1 (AT2G47280.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 159.8 bits (403), Expect = 1.8e-39
Identity = 83/193 (43.01%), Postives = 118/193 (61.14%), Query Frame = 1

Query: 8   IILVLMMMIFVRGNEGEPYRRVGSKKFAWKTLIVDKKGHGNFSTIQAAIDSVPSNNRFWV 67
           I+ +++M +FV G          +++ A+ T+ VD  G GNF+T+Q+AIDS+   N  W+
Sbjct: 11  IVCMVVMTLFVYGYSA------AAEQIAY-TITVDLNGGGNFTTVQSAIDSISPPNHNWI 70

Query: 68  SIHIRPGLYREKVKIPYDKPYIILKGHRKRRTKVVWDDHLTVAQSPTFTSSADNIVVKSI 127
            +  + G+YREKV IP +K +I L+G    +T + +DDH     S TFT+ AD+IV+  I
Sbjct: 71  RVFTQNGIYREKVTIPKEKGFIYLQGKGIEQTVIEYDDHQATDISATFTAFADDIVISGI 130

Query: 128 SFVNSYNYPWKNGNPRVPAVAAMITGDKSSFYRCGFYGVQDTLWDNQGRHYYHRCTIQGA 187
           +F N+YN    N    VPAVAA + GD+       F G+QDTL+D +GRHYY RC I G 
Sbjct: 131 TFKNTYNIVPNNKREIVPAVAARMLGDRYVVTDSSFVGLQDTLFDGKGRHYYKRCIISGG 190

Query: 188 VDFIFGAAQSIFQ 201
           +DFIFG  QS+F+
Sbjct: 191 IDFIFGYGQSLFK 196

BLAST of Csa2G138720 vs. TAIR10
Match: AT2G19150.1 (AT2G19150.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 155.2 bits (391), Expect = 4.5e-38
Identity = 82/183 (44.81%), Postives = 106/183 (57.92%), Query Frame = 1

Query: 30  GSKKFAWKTLIVDKKGHGNFSTIQAAIDSVPSNNRFWVSIHIRPGLYREKVKIPYDKPYI 89
           GS     KT+IV+      F T+Q+AIDS+P  N+ W+ I I  G+Y EKV IP  K YI
Sbjct: 32  GSSSQIAKTIIVNPNDARYFKTVQSAIDSIPLQNQDWIRILISNGIYSEKVTIPRGKGYI 91

Query: 90  ILKGHRKRRTKVVWDDHLTVAQSPTFTSSADNIVVKSISFVNSYNYPWKNGNPRVPAVAA 149
            ++G    +T + + DH     S TFTS   NI++  I+F N YN    + +P  PAVAA
Sbjct: 92  YMQGGGIEKTIIAYGDHQLTNTSATFTSYPSNIIITGITFKNKYNIA-SSSSPTKPAVAA 151

Query: 150 MITGDKSSFYRCGFYGVQDTLWDNQGRHYYHRCTIQGAVDFIFGAAQSIFQVFFLFIPTN 209
           M+ GDK +     F G QDTL+D+ GRHYY RC I G +DFIFG AQSIF+   L +   
Sbjct: 152 MMLGDKYAIIDSSFDGFQDTLYDDYGRHYYKRCVISGGIDFIFGGAQSIFEGCTLKLRVG 211

Query: 210 LSP 213
           + P
Sbjct: 212 IYP 213

BLAST of Csa2G138720 vs. TAIR10
Match: AT3G17060.1 (AT3G17060.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 141.7 bits (356), Expect = 5.1e-34
Identity = 72/174 (41.38%), Postives = 109/174 (62.64%), Query Frame = 1

Query: 37  KTLIVDKKGHGNFSTIQAAIDSVPSNNRFWVSIHIRPGLYREKVKIPYDKPYIILKGHRK 96
           +++IVD +G G+++++Q AID+VP  N  W+ +H+R G+Y+E+V IP +KP+I ++G+ K
Sbjct: 44  RSIIVDIEGKGDYTSVQKAIDAVPVGNSNWIIVHVRKGIYKERVHIPENKPFIFMRGNGK 103

Query: 97  RRTKVVWDDHLTV--AQSPTFTSSADNIVVKSISFVNS--YNYPWKNGNPRVPAVAAMIT 156
            +T V+     +V    S TF   A++ V   IS  N       + + N    +VAA + 
Sbjct: 104 GKT-VIESSQSSVDNVASATFKVEANHFVAFGISIRNDAPVGMAFTSENQ---SVAAFVA 163

Query: 157 GDKSSFYRCGFYGVQDTLWDNQGRHYYHRCTIQGAVDFIFGAAQSIFQVFFLFI 207
            DK +FY C FY + +TL+DN+GRHYYH C IQG++DFIFG A SIF    +F+
Sbjct: 164 ADKVAFYHCAFYSLHNTLFDNKGRHYYHECYIQGSIDFIFGRATSIFNNCEIFV 213

BLAST of Csa2G138720 vs. NCBI nr
Match: gi|700206349|gb|KGN61468.1| (hypothetical protein Csa_2G138720 [Cucumis sativus])

HSP 1 Score: 447.2 bits (1149), Expect = 1.6e-122
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 1

Query: 1   MWIIIRGIILVLMMMIFVRGNEGEPYRRVGSKKFAWKTLIVDKKGHGNFSTIQAAIDSVP 60
           MWIIIRGIILVLMMMIFVRGNEGEPYRRVGSKKFAWKTLIVDKKGHGNFSTIQAAIDSVP
Sbjct: 1   MWIIIRGIILVLMMMIFVRGNEGEPYRRVGSKKFAWKTLIVDKKGHGNFSTIQAAIDSVP 60

Query: 61  SNNRFWVSIHIRPGLYREKVKIPYDKPYIILKGHRKRRTKVVWDDHLTVAQSPTFTSSAD 120
           SNNRFWVSIHIRPGLYREKVKIPYDKPYIILKGHRKRRTKVVWDDHLTVAQSPTFTSSAD
Sbjct: 61  SNNRFWVSIHIRPGLYREKVKIPYDKPYIILKGHRKRRTKVVWDDHLTVAQSPTFTSSAD 120

Query: 121 NIVVKSISFVNSYNYPWKNGNPRVPAVAAMITGDKSSFYRCGFYGVQDTLWDNQGRHYYH 180
           NIVVKSISFVNSYNYPWKNGNPRVPAVAAMITGDKSSFYRCGFYGVQDTLWDNQGRHYYH
Sbjct: 121 NIVVKSISFVNSYNYPWKNGNPRVPAVAAMITGDKSSFYRCGFYGVQDTLWDNQGRHYYH 180

Query: 181 RCTIQGAVDFIFGAAQSIFQVFFLFIPTNLSPTS 215
           RCTIQGAVDFIFGAAQSIFQVFFLFIPTNLSPTS
Sbjct: 181 RCTIQGAVDFIFGAAQSIFQVFFLFIPTNLSPTS 214

BLAST of Csa2G138720 vs. NCBI nr
Match: gi|778674132|ref|XP_011650140.1| (PREDICTED: probable pectinesterase 29 [Cucumis sativus])

HSP 1 Score: 419.5 bits (1077), Expect = 3.6e-114
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 1

Query: 1   MWIIIRGIILVLMMMIFVRGNEGEPYRRVGSKKFAWKTLIVDKKGHGNFSTIQAAIDSVP 60
           MWIIIRGIILVLMMMIFVRGNEGEPYRRVGSKKFAWKTLIVDKKGHGNFSTIQAAIDSVP
Sbjct: 1   MWIIIRGIILVLMMMIFVRGNEGEPYRRVGSKKFAWKTLIVDKKGHGNFSTIQAAIDSVP 60

Query: 61  SNNRFWVSIHIRPGLYREKVKIPYDKPYIILKGHRKRRTKVVWDDHLTVAQSPTFTSSAD 120
           SNNRFWVSIHIRPGLYREKVKIPYDKPYIILKGHRKRRTKVVWDDHLTVAQSPTFTSSAD
Sbjct: 61  SNNRFWVSIHIRPGLYREKVKIPYDKPYIILKGHRKRRTKVVWDDHLTVAQSPTFTSSAD 120

Query: 121 NIVVKSISFVNSYNYPWKNGNPRVPAVAAMITGDKSSFYRCGFYGVQDTLWDNQGRHYYH 180
           NIVVKSISFVNSYNYPWKNGNPRVPAVAAMITGDKSSFYRCGFYGVQDTLWDNQGRHYYH
Sbjct: 121 NIVVKSISFVNSYNYPWKNGNPRVPAVAAMITGDKSSFYRCGFYGVQDTLWDNQGRHYYH 180

Query: 181 RCTIQGAVDFIFGAAQSIFQ 201
           RCTIQGAVDFIFGAAQSIFQ
Sbjct: 181 RCTIQGAVDFIFGAAQSIFQ 200

BLAST of Csa2G138720 vs. NCBI nr
Match: gi|659114888|ref|XP_008457276.1| (PREDICTED: probable pectinesterase 29 [Cucumis melo])

HSP 1 Score: 397.1 bits (1019), Expect = 1.9e-107
Identity = 190/200 (95.00%), Postives = 193/200 (96.50%), Query Frame = 1

Query: 1   MWIIIRGIILVLMMMIFVRGNEGEPYRRVGSKKFAWKTLIVDKKGHGNFSTIQAAIDSVP 60
           MW IIRGI  VLMM+IFVRGNEGE YRR+G KKFAWKTLIVDK GHGNFSTIQAAIDSVP
Sbjct: 1   MWTIIRGIF-VLMMIIFVRGNEGESYRRIGRKKFAWKTLIVDKNGHGNFSTIQAAIDSVP 60

Query: 61  SNNRFWVSIHIRPGLYREKVKIPYDKPYIILKGHRKRRTKVVWDDHLTVAQSPTFTSSAD 120
           S+NRFWVSIHIRPGLYREKVKIPYDKPYIILKGHRKR TKVVWDDHLTVAQSPTFTSSAD
Sbjct: 61  SDNRFWVSIHIRPGLYREKVKIPYDKPYIILKGHRKRNTKVVWDDHLTVAQSPTFTSSAD 120

Query: 121 NIVVKSISFVNSYNYPWKNGNPRVPAVAAMITGDKSSFYRCGFYGVQDTLWDNQGRHYYH 180
           NIVVKSISFVNSYNYPWKNGNPRVPAVAAMITGDKSSFYRCGFYGVQDTLWDNQGRHYYH
Sbjct: 121 NIVVKSISFVNSYNYPWKNGNPRVPAVAAMITGDKSSFYRCGFYGVQDTLWDNQGRHYYH 180

Query: 181 RCTIQGAVDFIFGAAQSIFQ 201
           RCTIQGAVDFIFGAAQSIFQ
Sbjct: 181 RCTIQGAVDFIFGAAQSIFQ 199

BLAST of Csa2G138720 vs. NCBI nr
Match: gi|703142522|ref|XP_010107773.1| (putative pectinesterase 29 [Morus notabilis])

HSP 1 Score: 272.7 bits (696), Expect = 5.5e-70
Identity = 128/187 (68.45%), Postives = 154/187 (82.35%), Query Frame = 1

Query: 14  MMIFVRGNEGEPYRRVGSKKFAWKTLIVDKKGHGNFSTIQAAIDSVPSNNRFWVSIHIRP 73
           M++ +    G+ YR+VG KKFA+ T+ VD  G GNFSTIQ+AI+SVPSNN++WV I I+ 
Sbjct: 1   MVLSLGQANGQWYRKVGYKKFAYYTITVDPSGQGNFSTIQSAINSVPSNNKYWVCIRIKA 60

Query: 74  GLYREKVKIPYDKPYIILKGHRKRRTKVVWDDHLTVAQSPTFTSSADNIVVKSISFVNSY 133
           G+YREK+KIPYDKPYIILKG  +R+T+VVWDDH T+AQSPTFTS ADNIV K +SF NSY
Sbjct: 61  GIYREKIKIPYDKPYIILKGEGRRKTQVVWDDHDTLAQSPTFTSLADNIVAKCMSFTNSY 120

Query: 134 NYPWKNGNPRVPAVAAMITGDKSSFYRCGFYGVQDTLWDNQGRHYYHRCTIQGAVDFIFG 193
           N P  N  PR PA AAMITGDK+ F+RCGF+G+QDTLWD+QGRHYY  CTIQGAVDFIFG
Sbjct: 121 NRP-PNDKPRAPAAAAMITGDKTKFFRCGFFGLQDTLWDDQGRHYYKLCTIQGAVDFIFG 180

Query: 194 AAQSIFQ 201
           + QSIF+
Sbjct: 181 SGQSIFE 186

BLAST of Csa2G138720 vs. NCBI nr
Match: gi|223542702|gb|EEF44239.1| (Pectinesterase U1 precursor, putative [Ricinus communis])

HSP 1 Score: 266.2 bits (679), Expect = 5.1e-68
Identity = 121/170 (71.18%), Postives = 149/170 (87.65%), Query Frame = 1

Query: 31  SKKFAWKTLIVDKKGHGNFSTIQAAIDSVPSNNRFWVSIHIRPGLYREKVKIPYDKPYII 90
           +KKF + +++VD+ GHGNFST+Q+AIDSVPSNN+ W+ I+I+ G+YREKVKIPYD+PYII
Sbjct: 40  NKKFPYVSVLVDQSGHGNFSTVQSAIDSVPSNNKNWICIYIKAGIYREKVKIPYDRPYII 99

Query: 91  LKGHRKRRTKVVWDDHLTVAQSPTFTSSADNIVVKSISFVNSYNYPWKNGNPRVPAVAAM 150
           LKG  KRRT+++WDDH + AQSPTF S ADNI+VKSI FVNSYN+   + NPRVPAVAAM
Sbjct: 100 LKGEAKRRTQIIWDDHDSTAQSPTFMSLADNIIVKSIRFVNSYNF-LNSNNPRVPAVAAM 159

Query: 151 ITGDKSSFYRCGFYGVQDTLWDNQGRHYYHRCTIQGAVDFIFGAAQSIFQ 201
           I GDKS+FYRCGF GVQDTLWD+QGRHY+ +CTIQGAVDFIFG+ QSI++
Sbjct: 160 IAGDKSAFYRCGFAGVQDTLWDDQGRHYFKKCTIQGAVDFIFGSGQSIYE 208

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PME29_ARATH1.1e-6268.48Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1[more]
PME55_ARATH5.7e-5964.85Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1[more]
PME66_ARATH3.2e-3843.01Probable pectinesterase 66 OS=Arabidopsis thaliana GN=PME66 PE=2 SV=2[more]
PME10_ARATH8.0e-3744.81Putative pectinesterase 10 OS=Arabidopsis thaliana GN=PME10 PE=2 SV=1[more]
PME67_ARATH9.1e-3341.38Probable pectinesterase 67 OS=Arabidopsis thaliana GN=PME67 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LI69_CUCSA1.1e-122100.00Pectinesterase OS=Cucumis sativus GN=Csa_2G138720 PE=4 SV=1[more]
W9SM62_9ROSA3.8e-7068.45Pectinesterase OS=Morus notabilis GN=L484_021593 PE=4 SV=1[more]
B9RWI7_RICCO3.6e-6871.18Pectinesterase OS=Ricinus communis GN=RCOM_1019830 PE=4 SV=1[more]
M5Y357_PRUPE6.1e-6873.53Pectinesterase OS=Prunus persica GN=PRUPE_ppa020682mg PE=4 SV=1[more]
B9IJH0_POPTR7.9e-6873.78Pectinesterase OS=Populus trichocarpa GN=POPTR_0017s08180g PE=4 SV=2[more]
Match NameE-valueIdentityDescription
AT3G24130.16.2e-6468.48 Pectin lyase-like superfamily protein[more]
AT5G18990.13.2e-6064.85 Pectin lyase-like superfamily protein[more]
AT2G47280.11.8e-3943.01 Pectin lyase-like superfamily protein[more]
AT2G19150.14.5e-3844.81 Pectin lyase-like superfamily protein[more]
AT3G17060.15.1e-3441.38 Pectin lyase-like superfamily protein[more]
Match NameE-valueIdentityDescription
gi|700206349|gb|KGN61468.1|1.6e-122100.00hypothetical protein Csa_2G138720 [Cucumis sativus][more]
gi|778674132|ref|XP_011650140.1|3.6e-114100.00PREDICTED: probable pectinesterase 29 [Cucumis sativus][more]
gi|659114888|ref|XP_008457276.1|1.9e-10795.00PREDICTED: probable pectinesterase 29 [Cucumis melo][more]
gi|703142522|ref|XP_010107773.1|5.5e-7068.45putative pectinesterase 29 [Morus notabilis][more]
gi|223542702|gb|EEF44239.1|5.1e-6871.18Pectinesterase U1 precursor, putative [Ricinus communis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000070Pectinesterase_cat
IPR011050Pectin_lyase_fold/virulence
IPR012334Pectin_lyas_fold
Vocabulary: Cellular Component
TermDefinition
GO:0005618cell wall
Vocabulary: Molecular Function
TermDefinition
GO:0030599pectinesterase activity
Vocabulary: Biological Process
TermDefinition
GO:0042545cell wall modification
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042545 cell wall modification
biological_process GO:0005982 starch metabolic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0045490 pectin catabolic process
cellular_component GO:0005618 cell wall
cellular_component GO:0005576 extracellular region
molecular_function GO:0045330 aspartyl esterase activity
molecular_function GO:0030599 pectinesterase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G138720.1Csa2G138720.1mRNA


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000070Pectinesterase, catalyticPFAMPF01095Pectinesterasecoord: 39..201
score: 4.9
IPR011050Pectin lyase fold/virulence factorunknownSSF51126Pectin lyase-likecoord: 37..200
score: 7.54
IPR012334Pectin lyase foldGENE3DG3DSA:2.160.20.10coord: 37..200
score: 7.3
NoneNo IPR availablePANTHERPTHR31321FAMILY NOT NAMEDcoord: 1..200
score: 7.9E
NoneNo IPR availablePANTHERPTHR31321:SF11PECTINESTERASE 10-RELATEDcoord: 1..200
score: 7.9E