CmoCh17G001080 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh17G001080
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Pectinesterase (3.1.1.11)
Location	Cmo_Chr17 : 580652 .. 582249 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATGATGATAATATTTGTACGAGGAAATGAAGATGAACGTTATAGAAGCGTGGGAGGGAAGAAATTGGCATGGCGGACAGTGGTTGTGGATCAGAGCGGCCATGGAAATTTCTCAACCATTCAAGCCGCCATTGATTCTGTTCCTTCAAATAATATGTTCTGGATCTCCATTCATATCAACCCTGGTATTTACAGGTCATTTTCAATTTCCTTAATTACCCTCAATTTCTCTTCTTATTTATTTATTTATTTGTTTGTTTGTTTGTTTGTTTGTTCTTGTTTAGAGAGAAGGTGAAAATCCCATATGATAAGCCGTATATCATTTTGAAAGGACAAAGAAGAAAGACAACAAAGGTTGTCTGGAACGACCATTTCACTCTTGCTCAAAGTCCTACTTTCACTTCTTCAGCTGATAATGTTGTCGTTAAATCCATCACTTTTGTGGTAAGTAAGTGAACATCATTCATTTGTTCATATTAACTCTGTTTTTTTGTGATCTAATTCTTGTGGGTATTAGAATTCGTATAACTTTCCATGGACTAATGGAAATCGAAGAGCTCCAGCAGTTGCAGCTATGATCACCGGTGATAAGGCTTTGTTTTATAAATGTGGGTTCTATGGTGTCCAAGATACCTTGTGGGATGATCAAGGTCGACATTATTATCATCGTTGCGTCATTCAAGGTGCTGTCGATTTTATTTTCGGAAGCGCCCAATCCATTTTTCAGGTATCTTTTACTGTTTCGATATGACGTTTGAAGCAGCATAGGTAGCGGGAACTTACTAGGGTTTAGGGTTTAGAGTGAACTTGTGTAACAGCCCAGATCGCTAGTAGATATTGTCTTCTTTGGGCTTTTCCTTTCGGGCTTCTCCTCAAAGCTTTAAAACGCGTCTGCTAGTGGAAGGTTTCCATACCCTTATAAATGGATGTGGGACATCACAACTTGTGCTTAGTTAAAGTTGAAGTTGTGAAACCCTGATCGTTTTTGGTGATATGATGTTTGAAGCAAAATAGGTGGCAAGAACTTACTGGGGTTTAGGGTGAGACTGTGCTCGGATAAAGATGAAGTCATGAAACCCTAATCGTTTTCGATGATGTCAAAGGATATGATGTTTGAATCAACATAGAAGGTATGAACTTACTAGGGTTTAGGGTTTAGGGTGAGACTGTGTTCGGGTAAAGATGAAGTCGTGAAACCTTATTCGATGTCAAATGGTATGACGTTTGAAGTAACATAGGTAGCAGGAACTTACTAGAGTTTAGGGTTTAGGGTTTAGGATGAGCCTGTAGTCGGTTAAAGATGAAGTCGTGAAACCCGAATCGTTTTCGTTGATGTAGGGATGTTCGATATCAGTGGTGGGAGAAGCACTTCTTCCATTGGGGTCTACAAGCTTCATAACAGCACAAGGAAGAACCGACCCAAATGATGCAAATGGGTTTGTTTTCAAAGATTGCAAAGTGTTTGGGAGTGGCTCAGCTTTCTTAGGAAGGCCATGGAGAGGCTACTCAAGGGTTATCTTTTACAATTCTAGCTTCTCCAACGTCATAAACCCTAGTGGTTGGGATCCTTGGCATTTTGTTGGTCATGAGTAA

mRNA sequence

ATGGGAATGATGATAATATTTGTACGAGGAAATGAAGATGAACGTTATAGAAGCGTGGGAGGGAAGAAATTGGCATGGCGGACAGTGGTTGTGGATCAGAGCGGCCATGGAAATTTCTCAACCATTCAAGCCGCCATTGATTCTGTTCCTTCAAATAATATGTTCTGGATCTCCATTCATATCAACCCTGGTATTTACAGAGAGAAGGTGAAAATCCCATATGATAAGCCGTATATCATTTTGAAAGGACAAAGAAGAAAGACAACAAAGGTTGTCTGGAACGACCATTTCACTCTTGCTCAAAGTCCTACTTTCACTTCTTCAGCTGATAATGTTGTCGTTAAATCCATCACTTTTGTGAATTCGTATAACTTTCCATGGACTAATGGAAATCGAAGAGCTCCAGCAGTTGCAGCTATGATCACCGGTGATAAGGCTTTGTTTTATAAATGTGGGTTCTATGGTGTCCAAGATACCTTGTGGGATGATCAAGGTCGACATTATTATCATCGTTGCGTCATTCAAGGTGCTGTCGATTTTATTTTCGGAAGCGCCCAATCCATTTTTCAGGGATGTTCGATATCAGTGGTGGGAGAAGCACTTCTTCCATTGGGGTCTACAAGCTTCATAACAGCACAAGGAAGAACCGACCCAAATGATGCAAATGGGTTTGTTTTCAAAGATTGCAAAGTGTTTGGGAGTGGCTCAGCTTTCTTAGGAAGGCCATGGAGAGGCTACTCAAGGGTTATCTTTTACAATTCTAGCTTCTCCAACGTCATAAACCCTAGTGGTTGGGATCCTTGGCATTTTGTTGGTCATGAGTAA

Coding sequence (CDS)

ATGGGAATGATGATAATATTTGTACGAGGAAATGAAGATGAACGTTATAGAAGCGTGGGAGGGAAGAAATTGGCATGGCGGACAGTGGTTGTGGATCAGAGCGGCCATGGAAATTTCTCAACCATTCAAGCCGCCATTGATTCTGTTCCTTCAAATAATATGTTCTGGATCTCCATTCATATCAACCCTGGTATTTACAGAGAGAAGGTGAAAATCCCATATGATAAGCCGTATATCATTTTGAAAGGACAAAGAAGAAAGACAACAAAGGTTGTCTGGAACGACCATTTCACTCTTGCTCAAAGTCCTACTTTCACTTCTTCAGCTGATAATGTTGTCGTTAAATCCATCACTTTTGTGAATTCGTATAACTTTCCATGGACTAATGGAAATCGAAGAGCTCCAGCAGTTGCAGCTATGATCACCGGTGATAAGGCTTTGTTTTATAAATGTGGGTTCTATGGTGTCCAAGATACCTTGTGGGATGATCAAGGTCGACATTATTATCATCGTTGCGTCATTCAAGGTGCTGTCGATTTTATTTTCGGAAGCGCCCAATCCATTTTTCAGGGATGTTCGATATCAGTGGTGGGAGAAGCACTTCTTCCATTGGGGTCTACAAGCTTCATAACAGCACAAGGAAGAACCGACCCAAATGATGCAAATGGGTTTGTTTTCAAAGATTGCAAAGTGTTTGGGAGTGGCTCAGCTTTCTTAGGAAGGCCATGGAGAGGCTACTCAAGGGTTATCTTTTACAATTCTAGCTTCTCCAACGTCATAAACCCTAGTGGTTGGGATCCTTGGCATTTTGTTGGTCATGAGTAA

Homology

[Close]

BLAST of CmoCh17G001080 vs. Swiss-Prot
Match: PME29_ARATH (Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 5.7e-96
Identity = 162/249 (65.06%), Postives = 197/249 (79.12%), Query Frame = 1


Query: 29  VVVDQSGHGNFSTIQAAIDSVPSNNMFWISIHINPGIYREKVKIPYDKPYIILKGQRRKT 88
           V VDQSGHGNF+TIQ AIDSVP NN  W  I++  G+YREK+KIPY+KP+I+L G  ++ 
Sbjct: 34  VFVDQSGHGNFTTIQKAIDSVPINNRHWFFINVKAGLYREKIKIPYEKPFIVLVGAGKRL 93

Query: 89  TKVVWNDHFTLAQSPTFTSSADNVVVKSITFVNSYNFP---WTNGNRRAPAVAAMITGDK 148
           T+V W+DH+++AQSPTF++ ADN VVKSITF NSYNFP     N N R PAVAA+I GDK
Sbjct: 94  TRVEWDDHYSVAQSPTFSTLADNTVVKSITFANSYNFPSKGKMNKNPRTPAVAALIGGDK 153

Query: 149 ALFYKCGFYGVQDTLWDDQGRHYYHRCVIQGAVDFIFGSAQSIFQGCSISVVGEALLPLG 208
           + FY  GF G+QDTLWD  GRHY+HRC IQGAVDFIFG+ QSI+Q C I V+G  L P G
Sbjct: 154 SAFYSVGFAGIQDTLWDFDGRHYFHRCTIQGAVDFIFGTGQSIYQSCVIQVLGGQLEP-G 213

Query: 209 STSFITAQGRTDPNDANGFVFKDCKVFGSGSAFLGRPWRGYSRVIFYNSSFSNVINPSGW 268
              +ITAQGRT+P DANGF+F +C V+G+G AFLGRPWRGYSRVIFYNS+ ++V+ P GW
Sbjct: 214 LAGYITAQGRTNPYDANGFIFINCLVYGTGMAFLGRPWRGYSRVIFYNSNLTDVVVPEGW 273

Query: 269 DPWHFVGHE 275
           D W+FVGHE
Sbjct: 274 DAWNFVGHE 281

[Close]

BLAST of CmoCh17G001080 vs. Swiss-Prot
Match: PME55_ARATH (Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 1.5e-88
Identity = 154/249 (61.85%), Postives = 187/249 (75.10%), Query Frame = 1


Query: 29  VVVDQSGHGNFSTIQAAIDSVPSNNMFWISIHINPGIYREKVKIPYDKPYIILKGQRRKT 88
           V+VDQSGHGNF+TIQ AIDSVP NN  W  I++  G+YREK+ IP  KP+I++ G  +++
Sbjct: 29  VIVDQSGHGNFTTIQKAIDSVPINNTHWFFINVKAGLYREKITIPQKKPFIVIVGAGKRS 88

Query: 89  TKVVWNDHFTLAQSPTFTSSADNVVVKSITFVNSYNFPWT---NGNRRAPAVAAMITGDK 148
           T+V W+DH +LAQSPTF + ADN VVK ITF NSYNFP     N N R PAVAA I GDK
Sbjct: 89  TRVEWDDHASLAQSPTFATLADNTVVKKITFANSYNFPSNGKINKNPRVPAVAAFIGGDK 148

Query: 149 ALFYKCGFYGVQDTLWDDQGRHYYHRCVIQGAVDFIFGSAQSIFQGCSISVVGEALLPLG 208
           + FY  GF G+QDTLWD  GRHY+HRC IQGAVDFI GS QSI+Q C I V+G  L P G
Sbjct: 149 SAFYSVGFAGIQDTLWDSDGRHYFHRCTIQGAVDFILGSGQSIYQSCVIQVLGGQLGP-G 208

Query: 209 STSFITAQGRTDPNDANGFVFKDCKVFGSGSAFLGRPWRGYSRVIFYNSSFSNVINPSGW 268
            T +ITAQGRT+ NDANGFVF +C V G G A+LGR WR YSRVIFYNS+ ++V++P GW
Sbjct: 209 VTGYITAQGRTNANDANGFVFINCLVHGFGKAYLGRAWRPYSRVIFYNSNLTDVVDPLGW 268

Query: 269 DPWHFVGHE 275
             W++ G+E
Sbjct: 269 WEWNYQGYE 276

[Close]

BLAST of CmoCh17G001080 vs. Swiss-Prot
Match: PME10_ARATH (Putative pectinesterase 10 OS=Arabidopsis thaliana GN=PME10 PE=2 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 4.4e-64
Identity = 124/248 (50.00%), Postives = 153/248 (61.69%), Query Frame = 1


Query: 27  RTVVVDQSGHGNFSTIQAAIDSVPSNNMFWISIHINPGIYREKVKIPYDKPYIILKGQRR 86
           +T++V+ +    F T+Q+AIDS+P  N  WI I I+ GIY EKV IP  K YI ++G   
Sbjct: 39  KTIIVNPNDARYFKTVQSAIDSIPLQNQDWIRILISNGIYSEKVTIPRGKGYIYMQGGGI 98

Query: 87  KTTKVVWNDHFTLAQSPTFTSSADNVVVKSITFVNSYNFPWTNGNRRAPAVAAMITGDKA 146
           + T + + DH     S TFTS   N+++  ITF N YN   ++ +   PAVAAM+ GDK 
Sbjct: 99  EKTIIAYGDHQLTNTSATFTSYPSNIIITGITFKNKYNIA-SSSSPTKPAVAAMMLGDKY 158

Query: 147 LFYKCGFYGVQDTLWDDQGRHYYHRCVIQGAVDFIFGSAQSIFQGCSISVVGEALLPLGS 206
                 F G QDTL+DD GRHYY RCVI G +DFIFG AQSIF+GC++ +      P   
Sbjct: 159 AIIDSSFDGFQDTLYDDYGRHYYKRCVISGGIDFIFGGAQSIFEGCTLKLRVGIYPPNEV 218

Query: 207 TSFITAQGRTDPNDANGFVFKDCKVFGSGSAFLGRPWRGYSRVIFYNSSFSNVINPSGWD 266
              ITAQGR  P D  GFVFKDC V GSG A LGR W+ YSRVIFY S FS+ I P GWD
Sbjct: 219 YGTITAQGRDSPTDKGGFVFKDCTVMGSGKALLGRAWKSYSRVIFYRSMFSDNILPIGWD 278

Query: 267 PWHFVGHE 275
            W   G E
Sbjct: 279 AWKAKGQE 285

[Close]

BLAST of CmoCh17G001080 vs. Swiss-Prot
Match: PME66_ARATH (Probable pectinesterase 66 OS=Arabidopsis thaliana GN=PME66 PE=2 SV=2)

HSP 1 Score: 232.3 bits (591), Expect = 6.5e-60
Identity = 119/274 (43.43%), Postives = 164/274 (59.85%), Query Frame = 1


Query: 1   MGMMIIFVRGNEDERYRSVGGKKLAWRTVVVDQSGHGNFSTIQAAIDSVPSNNMFWISIH 60
           M +M +FV G       S   +++A+ T+ VD +G GNF+T+Q+AIDS+   N  WI + 
Sbjct: 14  MVVMTLFVYGY------SAAAEQIAY-TITVDLNGGGNFTTVQSAIDSISPPNHNWIRVF 73

Query: 61  INPGIYREKVKIPYDKPYIILKGQRRKTTKVVWNDHFTLAQSPTFTSSADNVVVKSITFV 120
              GIYREKV IP +K +I L+G+  + T + ++DH     S TFT+ AD++V+  ITF 
Sbjct: 74  TQNGIYREKVTIPKEKGFIYLQGKGIEQTVIEYDDHQATDISATFTAFADDIVISGITFK 133

Query: 121 NSYNFPWTNGNRRAPAVAAMITGDKALFYKCGFYGVQDTLWDDQGRHYYHRCVIQGAVDF 180
           N+YN    N     PAVAA + GD+ +     F G+QDTL+D +GRHYY RC+I G +DF
Sbjct: 134 NTYNIVPNNKREIVPAVAARMLGDRYVVTDSSFVGLQDTLFDGKGRHYYKRCIISGGIDF 193

Query: 181 IFGSAQSIFQGCSISVVGEALLPLGSTSFITAQGRTDPNDANGFVFKDCKVFGSGSAFLG 240
           IFG  QS+F+ C++++      P      ITA  R  P+D  GFVF DC V G G   LG
Sbjct: 194 IFGYGQSLFKECTLNMTLGIYAPDNPYGTITAHQRPSPSDEGGFVFSDCTVTGVGKTLLG 253

Query: 241 RPWRGYSRVIFYNSSFSNVINPSGWDPWHFVGHE 275
           R W   +RVIF  S  S+V+ P GWD W   G+E
Sbjct: 254 RAWGSNARVIFDRSRLSDVVLPIGWDAWRAKGNE 280

[Close]

BLAST of CmoCh17G001080 vs. Swiss-Prot
Match: PME11_ARATH (Putative pectinesterase 11 OS=Arabidopsis thaliana GN=PME11 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.6e-53
Identity = 113/240 (47.08%), Postives = 143/240 (59.58%), Query Frame = 1


Query: 31  VDQSGHGNFSTIQAAIDSVPSN--NMFWISIHINPGIYREKVKIPYDKPYIILKGQRRKT 90
           VDQSG G+FS IQ AI+S+P N  N     I + PGIYREKV IP +KPYI L G +   
Sbjct: 53  VDQSGKGDFSKIQEAIESIPPNLNNSQLYFIWVKPGIYREKVVIPAEKPYITLSGTQASN 112

Query: 91  TKVVWNDHFTLAQSPTFTSSADNVVVKSITFVNSYNFPWTNGNRRAPAVAAMITGDKALF 150
           T ++W+D   + +SPT T  A + V + +T  N +    T G     AVA  +  DKA F
Sbjct: 113 TFLIWSDGEDILESPTLTIFASDFVCRFLTIQNKFG---TAGR----AVALRVAADKAAF 172

Query: 151 YKCGFYGVQDTLWDDQGRHYYHRCVIQGAVDFIFGSAQSIFQGCSISVVGEALLPLGSTS 210
           Y C     QDTL DD G HY+  C I+GA DFI GSA S+++ C +     +L P  +  
Sbjct: 173 YGCVITSYQDTLLDDNGNHYFKNCYIEGATDFICGSASSLYERCHL----HSLSP--NNG 232

Query: 211 FITAQGRTDPNDANGFVFKDCKVFGSGSAFLGRPWRGYSRVIFYNSSFSNVINPSGWDPW 269
            ITAQ RT   + +GF F  CK+ GSGS FLGRPW  YSRV+F  S FSNV+ P GW+ W
Sbjct: 233 SITAQMRTSATEKSGFTFLGCKLTGSGSTFLGRPWGAYSRVVFAYSFFSNVVAPQGWNQW 279

[Close]

BLAST of CmoCh17G001080 vs. TrEMBL
Match: W9SM62_9ROSA (Pectinesterase OS=Morus notabilis GN=L484_021593 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 1.1e-106
Identity = 187/271 (69.00%), Postives = 217/271 (80.07%), Query Frame = 1


Query: 4   MIIFVRGNEDERYRSVGGKKLAWRTVVVDQSGHGNFSTIQAAIDSVPSNNMFWISIHINP 63
           M++ +     + YR VG KK A+ T+ VD SG GNFSTIQ+AI+SVPSNN +W+ I I  
Sbjct: 1   MVLSLGQANGQWYRKVGYKKFAYYTITVDPSGQGNFSTIQSAINSVPSNNKYWVCIRIKA 60

Query: 64  GIYREKVKIPYDKPYIILKGQRRKTTKVVWNDHFTLAQSPTFTSSADNVVVKSITFVNSY 123
           GIYREK+KIPYDKPYIILKG+ R+ T+VVW+DH TLAQSPTFTS ADN+V K ++F NSY
Sbjct: 61  GIYREKIKIPYDKPYIILKGEGRRKTQVVWDDHDTLAQSPTFTSLADNIVAKCMSFTNSY 120

Query: 124 NFPWTNGNRRAPAVAAMITGDKALFYKCGFYGVQDTLWDDQGRHYYHRCVIQGAVDFIFG 183
           N P  N   RAPA AAMITGDK  F++CGF+G+QDTLWDDQGRHYY  C IQGAVDFIFG
Sbjct: 121 NRP-PNDKPRAPAAAAMITGDKTKFFRCGFFGLQDTLWDDQGRHYYKLCTIQGAVDFIFG 180

Query: 184 SAQSIFQGCSISVVGEALLPLGSTSFITAQGRTDPNDANGFVFKDCKVFGSGSAFLGRPW 243
           S QSIF+ CSISVVG AL P G   FITAQGRT+PNDANGFVFKDC VFGSGSAFLGRPW
Sbjct: 181 SGQSIFERCSISVVGGALEP-GFQGFITAQGRTNPNDANGFVFKDCHVFGSGSAFLGRPW 240

Query: 244 RGYSRVIFYNSSFSNVINPSGWDPWHFVGHE 275
           RGY+RV FYN++ S+VI P GW+ W+F G E
Sbjct: 241 RGYARVFFYNTNISDVIVPQGWNAWNFAGQE 269

[Close]

BLAST of CmoCh17G001080 vs. TrEMBL
Match: M5Y357_PRUPE (Pectinesterase OS=Prunus persica GN=PRUPE_ppa020682mg PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 2.2e-102
Identity = 178/253 (70.36%), Postives = 208/253 (82.21%), Query Frame = 1


Query: 22  KKLAWRTVVVDQSGHGNFSTIQAAIDSVPSNNMFWISIHINPGIYREKVKIPYDKPYIIL 81
           KKLA+ T+ VDQSGHGNF++IQ+AID+VP NN  W+SI I  G Y+EKV IP DKPYIIL
Sbjct: 9   KKLAYYTITVDQSGHGNFTSIQSAIDAVPINNRNWVSIKIKAGTYKEKVIIPVDKPYIIL 68

Query: 82  KGQRRKTTKVVWNDHFTLAQSPTFTSSADNVVVKSITFVNSYNFPWTNGNRRAPAVAAMI 141
           KG+ R  T++VW+DH ++AQSPTF S AD+++VKSI+FVNSYN P  N N R  AVAAMI
Sbjct: 69  KGENRHKTQIVWDDHDSVAQSPTFASYADSIIVKSISFVNSYNNPVNNKNPRVAAVAAMI 128

Query: 142 TGDKALFYKCGFYGVQDTLWDDQGRHYYHRCVIQGAVDFIFGSAQSIFQGCSISVVGEAL 201
            GDK+ FY+CGF+G+QDTLWD QGRHYYH C IQGAVDFIFGSAQSIFQ CSI V+G AL
Sbjct: 129 YGDKSSFYRCGFFGLQDTLWDGQGRHYYHLCTIQGAVDFIFGSAQSIFQKCSIQVLGGAL 188

Query: 202 LPLGSTSFITAQGRTDPNDANGFVFKDCKVFGSGSAFLGRPWRGYSRVIFYNSSFSNVIN 261
            P GS  +ITAQGR +PNDA+GFVFKDCKV G+GS FLGR WRGYSRVIFYNS+FS V+ 
Sbjct: 189 DP-GSAGYITAQGRDNPNDASGFVFKDCKVSGTGSTFLGRAWRGYSRVIFYNSNFSQVVV 248

Query: 262 PSGWDPWHFVGHE 275
           P GWD WHF G+E
Sbjct: 249 PQGWDAWHFQGNE 260

[Close]

BLAST of CmoCh17G001080 vs. TrEMBL
Match: B9RWI7_RICCO (Pectinesterase OS=Ricinus communis GN=RCOM_1019830 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 1.8e-101
Identity = 174/253 (68.77%), Postives = 209/253 (82.61%), Query Frame = 1


Query: 22  KKLAWRTVVVDQSGHGNFSTIQAAIDSVPSNNMFWISIHINPGIYREKVKIPYDKPYIIL 81
           KK  + +V+VDQSGHGNFST+Q+AIDSVPSNN  WI I+I  GIYREKVKIPYD+PYIIL
Sbjct: 41  KKFPYVSVLVDQSGHGNFSTVQSAIDSVPSNNKNWICIYIKAGIYREKVKIPYDRPYIIL 100

Query: 82  KGQRRKTTKVVWNDHFTLAQSPTFTSSADNVVVKSITFVNSYNFPWTNGNRRAPAVAAMI 141
           KG+ ++ T+++W+DH + AQSPTF S ADN++VKSI FVNSYNF  +N N R PAVAAMI
Sbjct: 101 KGEAKRRTQIIWDDHDSTAQSPTFMSLADNIIVKSIRFVNSYNFLNSN-NPRVPAVAAMI 160

Query: 142 TGDKALFYKCGFYGVQDTLWDDQGRHYYHRCVIQGAVDFIFGSAQSIFQGCSISVVGEAL 201
            GDK+ FY+CGF GVQDTLWDDQGRHY+ +C IQGAVDFIFGS QSI++GC+I V+G+  
Sbjct: 161 AGDKSAFYRCGFAGVQDTLWDDQGRHYFKKCTIQGAVDFIFGSGQSIYEGCAIQVIGD-- 220

Query: 202 LPLGSTSFITAQGRTDPNDANGFVFKDCKVFGSGSAFLGRPWRGYSRVIFYNSSFSNVIN 261
                  FITAQGRT+P+DANGFVFK C VFG GSA+LGRPWRGYSRV+FY S+F+NVI+
Sbjct: 221 ------GFITAQGRTNPSDANGFVFKRCNVFGRGSAYLGRPWRGYSRVLFYQSNFTNVIH 280

Query: 262 PSGWDPWHFVGHE 275
           P GW+ W FV HE
Sbjct: 281 PEGWNAWDFVHHE 284

[Close]

BLAST of CmoCh17G001080 vs. TrEMBL
Match: B9IJH0_POPTR (Pectinesterase OS=Populus trichocarpa GN=POPTR_0017s08180g PE=4 SV=2)

HSP 1 Score: 374.0 bits (959), Expect = 1.5e-100
Identity = 169/248 (68.15%), Postives = 205/248 (82.66%), Query Frame = 1


Query: 27  RTVVVDQSGHGNFSTIQAAIDSVPSNNMFWISIHINPGIYREKVKIPYDKPYIILKGQRR 86
           RT+++D+SGHGNFS+IQ+AIDS+PS+N  W+ IH+  G YREKVKIPY+KPYIIL+G+ +
Sbjct: 21  RTLLIDKSGHGNFSSIQSAIDSMPSDNKNWVCIHVRAGTYREKVKIPYNKPYIILRGEGK 80

Query: 87  KTTKVVWNDHFTLAQSPTFTSSADNVVVKSITFVNSYNFPWTNGNRRAPAVAAMITGDKA 146
           + TK+VW+DHF+ AQSPTF S ADN+VV+SITFVNSYNFP  N N R PAVAAMITGDK 
Sbjct: 81  RRTKIVWDDHFSTAQSPTFVSLADNIVVRSITFVNSYNFPHDN-NPRLPAVAAMITGDKT 140

Query: 147 LFYKCGFYGVQDTLWDDQGRHYYHRCVIQGAVDFIFGSAQSIFQGCSISVVGEALLPLGS 206
            FY+CGF GVQDTLWD+ GRHY+ RC IQGAVDFIFGS QSI++GCSI V+         
Sbjct: 141 AFYQCGFAGVQDTLWDEAGRHYFKRCTIQGAVDFIFGSGQSIYEGCSIQVL--------E 200

Query: 207 TSFITAQGRTDPNDANGFVFKDCKVFGSGSAFLGRPWRGYSRVIFYNSSFSNVINPSGWD 266
             FITAQGRT+P+DANGFVFK C VFG  S +LGRPWRGYSRV+FY S+FSN+++P GW+
Sbjct: 201 GGFITAQGRTNPSDANGFVFKGCNVFGKSSVYLGRPWRGYSRVLFYKSNFSNIVDPEGWN 259

Query: 267 PWHFVGHE 275
            W+FVGHE
Sbjct: 261 AWNFVGHE 259

[Close]

BLAST of CmoCh17G001080 vs. TrEMBL
Match: A0A0B2Q5X6_GLYSO (Pectinesterase OS=Glycine soja GN=glysoja_036336 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 1.6e-97
Identity = 167/259 (64.48%), Postives = 208/259 (80.31%), Query Frame = 1


Query: 16  YRSVGGKKLAWRTVVVDQSGHGNFSTIQAAIDSVPSNNMFWISIHINPGIYREKVKIPYD 75
           YR+VG K L + ++VVDQSGHGNFSTIQ+AIDSVPSNN +W+SI +  G YREKVKIPYD
Sbjct: 27  YRNVGNKHLPYWSIVVDQSGHGNFSTIQSAIDSVPSNNRYWVSIKVKAGTYREKVKIPYD 86

Query: 76  KPYIILKGQRRKTTKVVWNDHFTLAQSPTFTSSADNVVVKSITFVNSYNFPWTNGNRRAP 135
           KP+IILKG+ ++ T V W+DH  ++QSPTF + ADN+VVK ++F NSYN P  N +   P
Sbjct: 87  KPFIILKGEGKRRTLVEWDDHNDISQSPTFAAMADNLVVKCMSFRNSYNNPINNKHENVP 146

Query: 136 AVAAMITGDKALFYKCGFYGVQDTLWDDQGRHYYHRCVIQGAVDFIFGSAQSIFQGCSIS 195
           AVAAM++GDKA F++ GF+GVQDTLWD  GRHYY  C +QGAVDFIFG+AQS+F+ CSIS
Sbjct: 147 AVAAMVSGDKAYFFRVGFFGVQDTLWDVAGRHYYMLCTMQGAVDFIFGAAQSLFERCSIS 206

Query: 196 VVGEALLPLGSTSFITAQGRTDPNDANGFVFKDCKVFGSGSAFLGRPWRGYSRVIFYNSS 255
           V+G AL P G + FITAQGR +  DANGFVFKDC VFGSGS++LGRPWR Y+RV+FYN++
Sbjct: 207 VIGGALAP-GLSGFITAQGRENSQDANGFVFKDCHVFGSGSSYLGRPWRSYARVLFYNTT 266

Query: 256 FSNVINPSGWDPWHFVGHE 275
            +NV+ PSGW    F G+E
Sbjct: 267 MTNVVQPSGWTSSDFAGYE 284

[Close]

BLAST of CmoCh17G001080 vs. TAIR10
Match: AT3G24130.1 (AT3G24130.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 352.1 bits (902), Expect = 3.2e-97
Identity = 162/249 (65.06%), Postives = 197/249 (79.12%), Query Frame = 1


Query: 29  VVVDQSGHGNFSTIQAAIDSVPSNNMFWISIHINPGIYREKVKIPYDKPYIILKGQRRKT 88
           V VDQSGHGNF+TIQ AIDSVP NN  W  I++  G+YREK+KIPY+KP+I+L G  ++ 
Sbjct: 34  VFVDQSGHGNFTTIQKAIDSVPINNRHWFFINVKAGLYREKIKIPYEKPFIVLVGAGKRL 93

Query: 89  TKVVWNDHFTLAQSPTFTSSADNVVVKSITFVNSYNFP---WTNGNRRAPAVAAMITGDK 148
           T+V W+DH+++AQSPTF++ ADN VVKSITF NSYNFP     N N R PAVAA+I GDK
Sbjct: 94  TRVEWDDHYSVAQSPTFSTLADNTVVKSITFANSYNFPSKGKMNKNPRTPAVAALIGGDK 153

Query: 149 ALFYKCGFYGVQDTLWDDQGRHYYHRCVIQGAVDFIFGSAQSIFQGCSISVVGEALLPLG 208
           + FY  GF G+QDTLWD  GRHY+HRC IQGAVDFIFG+ QSI+Q C I V+G  L P G
Sbjct: 154 SAFYSVGFAGIQDTLWDFDGRHYFHRCTIQGAVDFIFGTGQSIYQSCVIQVLGGQLEP-G 213

Query: 209 STSFITAQGRTDPNDANGFVFKDCKVFGSGSAFLGRPWRGYSRVIFYNSSFSNVINPSGW 268
              +ITAQGRT+P DANGF+F +C V+G+G AFLGRPWRGYSRVIFYNS+ ++V+ P GW
Sbjct: 214 LAGYITAQGRTNPYDANGFIFINCLVYGTGMAFLGRPWRGYSRVIFYNSNLTDVVVPEGW 273

Query: 269 DPWHFVGHE 275
           D W+FVGHE
Sbjct: 274 DAWNFVGHE 281

[Close]

BLAST of CmoCh17G001080 vs. TAIR10
Match: AT5G18990.1 (AT5G18990.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 327.4 bits (838), Expect = 8.4e-90
Identity = 154/249 (61.85%), Postives = 187/249 (75.10%), Query Frame = 1


Query: 29  VVVDQSGHGNFSTIQAAIDSVPSNNMFWISIHINPGIYREKVKIPYDKPYIILKGQRRKT 88
           V+VDQSGHGNF+TIQ AIDSVP NN  W  I++  G+YREK+ IP  KP+I++ G  +++
Sbjct: 29  VIVDQSGHGNFTTIQKAIDSVPINNTHWFFINVKAGLYREKITIPQKKPFIVIVGAGKRS 88

Query: 89  TKVVWNDHFTLAQSPTFTSSADNVVVKSITFVNSYNFPWT---NGNRRAPAVAAMITGDK 148
           T+V W+DH +LAQSPTF + ADN VVK ITF NSYNFP     N N R PAVAA I GDK
Sbjct: 89  TRVEWDDHASLAQSPTFATLADNTVVKKITFANSYNFPSNGKINKNPRVPAVAAFIGGDK 148

Query: 149 ALFYKCGFYGVQDTLWDDQGRHYYHRCVIQGAVDFIFGSAQSIFQGCSISVVGEALLPLG 208
           + FY  GF G+QDTLWD  GRHY+HRC IQGAVDFI GS QSI+Q C I V+G  L P G
Sbjct: 149 SAFYSVGFAGIQDTLWDSDGRHYFHRCTIQGAVDFILGSGQSIYQSCVIQVLGGQLGP-G 208

Query: 209 STSFITAQGRTDPNDANGFVFKDCKVFGSGSAFLGRPWRGYSRVIFYNSSFSNVINPSGW 268
            T +ITAQGRT+ NDANGFVF +C V G G A+LGR WR YSRVIFYNS+ ++V++P GW
Sbjct: 209 VTGYITAQGRTNANDANGFVFINCLVHGFGKAYLGRAWRPYSRVIFYNSNLTDVVDPLGW 268

Query: 269 DPWHFVGHE 275
             W++ G+E
Sbjct: 269 WEWNYQGYE 276

[Close]

BLAST of CmoCh17G001080 vs. TAIR10
Match: AT2G19150.1 (AT2G19150.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 246.1 bits (627), Expect = 2.5e-65
Identity = 124/248 (50.00%), Postives = 153/248 (61.69%), Query Frame = 1


Query: 27  RTVVVDQSGHGNFSTIQAAIDSVPSNNMFWISIHINPGIYREKVKIPYDKPYIILKGQRR 86
           +T++V+ +    F T+Q+AIDS+P  N  WI I I+ GIY EKV IP  K YI ++G   
Sbjct: 39  KTIIVNPNDARYFKTVQSAIDSIPLQNQDWIRILISNGIYSEKVTIPRGKGYIYMQGGGI 98

Query: 87  KTTKVVWNDHFTLAQSPTFTSSADNVVVKSITFVNSYNFPWTNGNRRAPAVAAMITGDKA 146
           + T + + DH     S TFTS   N+++  ITF N YN   ++ +   PAVAAM+ GDK 
Sbjct: 99  EKTIIAYGDHQLTNTSATFTSYPSNIIITGITFKNKYNIA-SSSSPTKPAVAAMMLGDKY 158

Query: 147 LFYKCGFYGVQDTLWDDQGRHYYHRCVIQGAVDFIFGSAQSIFQGCSISVVGEALLPLGS 206
                 F G QDTL+DD GRHYY RCVI G +DFIFG AQSIF+GC++ +      P   
Sbjct: 159 AIIDSSFDGFQDTLYDDYGRHYYKRCVISGGIDFIFGGAQSIFEGCTLKLRVGIYPPNEV 218

Query: 207 TSFITAQGRTDPNDANGFVFKDCKVFGSGSAFLGRPWRGYSRVIFYNSSFSNVINPSGWD 266
              ITAQGR  P D  GFVFKDC V GSG A LGR W+ YSRVIFY S FS+ I P GWD
Sbjct: 219 YGTITAQGRDSPTDKGGFVFKDCTVMGSGKALLGRAWKSYSRVIFYRSMFSDNILPIGWD 278

Query: 267 PWHFVGHE 275
            W   G E
Sbjct: 279 AWKAKGQE 285

[Close]

BLAST of CmoCh17G001080 vs. TAIR10
Match: AT2G47280.1 (AT2G47280.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 232.3 bits (591), Expect = 3.7e-61
Identity = 119/274 (43.43%), Postives = 164/274 (59.85%), Query Frame = 1


Query: 1   MGMMIIFVRGNEDERYRSVGGKKLAWRTVVVDQSGHGNFSTIQAAIDSVPSNNMFWISIH 60
           M +M +FV G       S   +++A+ T+ VD +G GNF+T+Q+AIDS+   N  WI + 
Sbjct: 14  MVVMTLFVYGY------SAAAEQIAY-TITVDLNGGGNFTTVQSAIDSISPPNHNWIRVF 73

Query: 61  INPGIYREKVKIPYDKPYIILKGQRRKTTKVVWNDHFTLAQSPTFTSSADNVVVKSITFV 120
              GIYREKV IP +K +I L+G+  + T + ++DH     S TFT+ AD++V+  ITF 
Sbjct: 74  TQNGIYREKVTIPKEKGFIYLQGKGIEQTVIEYDDHQATDISATFTAFADDIVISGITFK 133

Query: 121 NSYNFPWTNGNRRAPAVAAMITGDKALFYKCGFYGVQDTLWDDQGRHYYHRCVIQGAVDF 180
           N+YN    N     PAVAA + GD+ +     F G+QDTL+D +GRHYY RC+I G +DF
Sbjct: 134 NTYNIVPNNKREIVPAVAARMLGDRYVVTDSSFVGLQDTLFDGKGRHYYKRCIISGGIDF 193

Query: 181 IFGSAQSIFQGCSISVVGEALLPLGSTSFITAQGRTDPNDANGFVFKDCKVFGSGSAFLG 240
           IFG  QS+F+ C++++      P      ITA  R  P+D  GFVF DC V G G   LG
Sbjct: 194 IFGYGQSLFKECTLNMTLGIYAPDNPYGTITAHQRPSPSDEGGFVFSDCTVTGVGKTLLG 253

Query: 241 RPWRGYSRVIFYNSSFSNVINPSGWDPWHFVGHE 275
           R W   +RVIF  S  S+V+ P GWD W   G+E
Sbjct: 254 RAWGSNARVIFDRSRLSDVVLPIGWDAWRAKGNE 280

[Close]

BLAST of CmoCh17G001080 vs. TAIR10
Match: AT2G21610.1 (AT2G21610.1 pectinesterase 11)

HSP 1 Score: 211.1 bits (536), Expect = 8.8e-55
Identity = 113/240 (47.08%), Postives = 143/240 (59.58%), Query Frame = 1


Query: 31  VDQSGHGNFSTIQAAIDSVPSN--NMFWISIHINPGIYREKVKIPYDKPYIILKGQRRKT 90
           VDQSG G+FS IQ AI+S+P N  N     I + PGIYREKV IP +KPYI L G +   
Sbjct: 53  VDQSGKGDFSKIQEAIESIPPNLNNSQLYFIWVKPGIYREKVVIPAEKPYITLSGTQASN 112

Query: 91  TKVVWNDHFTLAQSPTFTSSADNVVVKSITFVNSYNFPWTNGNRRAPAVAAMITGDKALF 150
           T ++W+D   + +SPT T  A + V + +T  N +    T G     AVA  +  DKA F
Sbjct: 113 TFLIWSDGEDILESPTLTIFASDFVCRFLTIQNKFG---TAGR----AVALRVAADKAAF 172

Query: 151 YKCGFYGVQDTLWDDQGRHYYHRCVIQGAVDFIFGSAQSIFQGCSISVVGEALLPLGSTS 210
           Y C     QDTL DD G HY+  C I+GA DFI GSA S+++ C +     +L P  +  
Sbjct: 173 YGCVITSYQDTLLDDNGNHYFKNCYIEGATDFICGSASSLYERCHL----HSLSP--NNG 232

Query: 211 FITAQGRTDPNDANGFVFKDCKVFGSGSAFLGRPWRGYSRVIFYNSSFSNVINPSGWDPW 269
            ITAQ RT   + +GF F  CK+ GSGS FLGRPW  YSRV+F  S FSNV+ P GW+ W
Sbjct: 233 SITAQMRTSATEKSGFTFLGCKLTGSGSTFLGRPWGAYSRVVFAYSFFSNVVAPQGWNQW 279

[Close]

BLAST of CmoCh17G001080 vs. NCBI nr
Match: gi|659114888|ref|XP_008457276.1| (PREDICTED: probable pectinesterase 29 [Cucumis melo])

HSP 1 Score: 507.7 bits (1306), Expect = 1.3e-140
Identity = 228/272 (83.82%), Postives = 255/272 (93.75%), Query Frame = 1


Query: 3   MMIIFVRGNEDERYRSVGGKKLAWRTVVVDQSGHGNFSTIQAAIDSVPSNNMFWISIHIN 62
           MMIIFVRGNE E YR +G KK AW+T++VD++GHGNFSTIQAAIDSVPS+N FW+SIHI 
Sbjct: 12  MMIIFVRGNEGESYRRIGRKKFAWKTLIVDKNGHGNFSTIQAAIDSVPSDNRFWVSIHIR 71

Query: 63  PGIYREKVKIPYDKPYIILKGQRRKTTKVVWNDHFTLAQSPTFTSSADNVVVKSITFVNS 122
           PG+YREKVKIPYDKPYIILKG R++ TKVVW+DH T+AQSPTFTSSADN+VVKSI+FVNS
Sbjct: 72  PGLYREKVKIPYDKPYIILKGHRKRNTKVVWDDHLTVAQSPTFTSSADNIVVKSISFVNS 131

Query: 123 YNFPWTNGNRRAPAVAAMITGDKALFYKCGFYGVQDTLWDDQGRHYYHRCVIQGAVDFIF 182
           YN+PW NGN R PAVAAMITGDK+ FY+CGFYGVQDTLWD+QGRHYYHRC IQGAVDFIF
Sbjct: 132 YNYPWKNGNPRVPAVAAMITGDKSSFYRCGFYGVQDTLWDNQGRHYYHRCTIQGAVDFIF 191

Query: 183 GSAQSIFQGCSISVVGEALLPLGSTSFITAQGRTDPNDANGFVFKDCKVFGSGSAFLGRP 242
           G+AQSIFQGCSISVVGEALLPLGSTSFITAQGRTDPNDANGFVFK+C VFGSGSA+LGRP
Sbjct: 192 GAAQSIFQGCSISVVGEALLPLGSTSFITAQGRTDPNDANGFVFKECNVFGSGSAYLGRP 251

Query: 243 WRGYSRVIFYNSSFSNVINPSGWDPWHFVGHE 275
           WR YSRVIF+NS+FSN+INP+GWDPWHFVG+E
Sbjct: 252 WRAYSRVIFHNSNFSNIINPNGWDPWHFVGYE 283

[Close]

BLAST of CmoCh17G001080 vs. NCBI nr
Match: gi|778674132|ref|XP_011650140.1| (PREDICTED: probable pectinesterase 29 [Cucumis sativus])

HSP 1 Score: 501.5 bits (1290), Expect = 9.2e-139
Identity = 226/272 (83.09%), Postives = 252/272 (92.65%), Query Frame = 1


Query: 3   MMIIFVRGNEDERYRSVGGKKLAWRTVVVDQSGHGNFSTIQAAIDSVPSNNMFWISIHIN 62
           MM+IFVRGNE E YR VG KK AW+T++VD+ GHGNFSTIQAAIDSVPSNN FW+SIHI 
Sbjct: 13  MMMIFVRGNEGEPYRRVGSKKFAWKTLIVDKKGHGNFSTIQAAIDSVPSNNRFWVSIHIR 72

Query: 63  PGIYREKVKIPYDKPYIILKGQRRKTTKVVWNDHFTLAQSPTFTSSADNVVVKSITFVNS 122
           PG+YREKVKIPYDKPYIILKG R++ TKVVW+DH T+AQSPTFTSSADN+VVKSI+FVNS
Sbjct: 73  PGLYREKVKIPYDKPYIILKGHRKRRTKVVWDDHLTVAQSPTFTSSADNIVVKSISFVNS 132

Query: 123 YNFPWTNGNRRAPAVAAMITGDKALFYKCGFYGVQDTLWDDQGRHYYHRCVIQGAVDFIF 182
           YN+PW NGN R PAVAAMITGDK+ FY+CGFYGVQDTLWD+QGRHYYHRC IQGAVDFIF
Sbjct: 133 YNYPWKNGNPRVPAVAAMITGDKSSFYRCGFYGVQDTLWDNQGRHYYHRCTIQGAVDFIF 192

Query: 183 GSAQSIFQGCSISVVGEALLPLGSTSFITAQGRTDPNDANGFVFKDCKVFGSGSAFLGRP 242
           G+AQSIFQGCSISVVGEALLP GSTSFITAQGRT+PNDANGFVFK+C VFGSGSA+LGRP
Sbjct: 193 GAAQSIFQGCSISVVGEALLPYGSTSFITAQGRTNPNDANGFVFKECNVFGSGSAYLGRP 252

Query: 243 WRGYSRVIFYNSSFSNVINPSGWDPWHFVGHE 275
           WR YSRVIF+NS+FSN+INP+GWDPW FVG+E
Sbjct: 253 WRAYSRVIFHNSNFSNIINPNGWDPWQFVGYE 284

[Close]

BLAST of CmoCh17G001080 vs. NCBI nr
Match: gi|703142522|ref|XP_010107773.1| (putative pectinesterase 29 [Morus notabilis])

HSP 1 Score: 394.4 bits (1012), Expect = 1.6e-106
Identity = 187/271 (69.00%), Postives = 217/271 (80.07%), Query Frame = 1


Query: 4   MIIFVRGNEDERYRSVGGKKLAWRTVVVDQSGHGNFSTIQAAIDSVPSNNMFWISIHINP 63
           M++ +     + YR VG KK A+ T+ VD SG GNFSTIQ+AI+SVPSNN +W+ I I  
Sbjct: 1   MVLSLGQANGQWYRKVGYKKFAYYTITVDPSGQGNFSTIQSAINSVPSNNKYWVCIRIKA 60

Query: 64  GIYREKVKIPYDKPYIILKGQRRKTTKVVWNDHFTLAQSPTFTSSADNVVVKSITFVNSY 123
           GIYREK+KIPYDKPYIILKG+ R+ T+VVW+DH TLAQSPTFTS ADN+V K ++F NSY
Sbjct: 61  GIYREKIKIPYDKPYIILKGEGRRKTQVVWDDHDTLAQSPTFTSLADNIVAKCMSFTNSY 120

Query: 124 NFPWTNGNRRAPAVAAMITGDKALFYKCGFYGVQDTLWDDQGRHYYHRCVIQGAVDFIFG 183
           N P  N   RAPA AAMITGDK  F++CGF+G+QDTLWDDQGRHYY  C IQGAVDFIFG
Sbjct: 121 NRP-PNDKPRAPAAAAMITGDKTKFFRCGFFGLQDTLWDDQGRHYYKLCTIQGAVDFIFG 180

Query: 184 SAQSIFQGCSISVVGEALLPLGSTSFITAQGRTDPNDANGFVFKDCKVFGSGSAFLGRPW 243
           S QSIF+ CSISVVG AL P G   FITAQGRT+PNDANGFVFKDC VFGSGSAFLGRPW
Sbjct: 181 SGQSIFERCSISVVGGALEP-GFQGFITAQGRTNPNDANGFVFKDCHVFGSGSAFLGRPW 240

Query: 244 RGYSRVIFYNSSFSNVINPSGWDPWHFVGHE 275
           RGY+RV FYN++ S+VI P GW+ W+F G E
Sbjct: 241 RGYARVFFYNTNISDVIVPQGWNAWNFAGQE 269

[Close]

BLAST of CmoCh17G001080 vs. NCBI nr
Match: gi|596263779|ref|XP_007224981.1| (hypothetical protein PRUPE_ppa020682mg [Prunus persica])

HSP 1 Score: 380.2 bits (975), Expect = 3.1e-102
Identity = 178/253 (70.36%), Postives = 208/253 (82.21%), Query Frame = 1


Query: 22  KKLAWRTVVVDQSGHGNFSTIQAAIDSVPSNNMFWISIHINPGIYREKVKIPYDKPYIIL 81
           KKLA+ T+ VDQSGHGNF++IQ+AID+VP NN  W+SI I  G Y+EKV IP DKPYIIL
Sbjct: 9   KKLAYYTITVDQSGHGNFTSIQSAIDAVPINNRNWVSIKIKAGTYKEKVIIPVDKPYIIL 68

Query: 82  KGQRRKTTKVVWNDHFTLAQSPTFTSSADNVVVKSITFVNSYNFPWTNGNRRAPAVAAMI 141
           KG+ R  T++VW+DH ++AQSPTF S AD+++VKSI+FVNSYN P  N N R  AVAAMI
Sbjct: 69  KGENRHKTQIVWDDHDSVAQSPTFASYADSIIVKSISFVNSYNNPVNNKNPRVAAVAAMI 128

Query: 142 TGDKALFYKCGFYGVQDTLWDDQGRHYYHRCVIQGAVDFIFGSAQSIFQGCSISVVGEAL 201
            GDK+ FY+CGF+G+QDTLWD QGRHYYH C IQGAVDFIFGSAQSIFQ CSI V+G AL
Sbjct: 129 YGDKSSFYRCGFFGLQDTLWDGQGRHYYHLCTIQGAVDFIFGSAQSIFQKCSIQVLGGAL 188

Query: 202 LPLGSTSFITAQGRTDPNDANGFVFKDCKVFGSGSAFLGRPWRGYSRVIFYNSSFSNVIN 261
            P GS  +ITAQGR +PNDA+GFVFKDCKV G+GS FLGR WRGYSRVIFYNS+FS V+ 
Sbjct: 189 DP-GSAGYITAQGRDNPNDASGFVFKDCKVSGTGSTFLGRAWRGYSRVIFYNSNFSQVVV 248

Query: 262 PSGWDPWHFVGHE 275
           P GWD WHF G+E
Sbjct: 249 PQGWDAWHFQGNE 260

[Close]

BLAST of CmoCh17G001080 vs. NCBI nr
Match: gi|223542702|gb|EEF44239.1| (Pectinesterase U1 precursor, putative [Ricinus communis])

HSP 1 Score: 377.1 bits (967), Expect = 2.6e-101
Identity = 174/253 (68.77%), Postives = 209/253 (82.61%), Query Frame = 1


Query: 22  KKLAWRTVVVDQSGHGNFSTIQAAIDSVPSNNMFWISIHINPGIYREKVKIPYDKPYIIL 81
           KK  + +V+VDQSGHGNFST+Q+AIDSVPSNN  WI I+I  GIYREKVKIPYD+PYIIL
Sbjct: 41  KKFPYVSVLVDQSGHGNFSTVQSAIDSVPSNNKNWICIYIKAGIYREKVKIPYDRPYIIL 100

Query: 82  KGQRRKTTKVVWNDHFTLAQSPTFTSSADNVVVKSITFVNSYNFPWTNGNRRAPAVAAMI 141
           KG+ ++ T+++W+DH + AQSPTF S ADN++VKSI FVNSYNF  +N N R PAVAAMI
Sbjct: 101 KGEAKRRTQIIWDDHDSTAQSPTFMSLADNIIVKSIRFVNSYNFLNSN-NPRVPAVAAMI 160

Query: 142 TGDKALFYKCGFYGVQDTLWDDQGRHYYHRCVIQGAVDFIFGSAQSIFQGCSISVVGEAL 201
            GDK+ FY+CGF GVQDTLWDDQGRHY+ +C IQGAVDFIFGS QSI++GC+I V+G+  
Sbjct: 161 AGDKSAFYRCGFAGVQDTLWDDQGRHYFKKCTIQGAVDFIFGSGQSIYEGCAIQVIGD-- 220

Query: 202 LPLGSTSFITAQGRTDPNDANGFVFKDCKVFGSGSAFLGRPWRGYSRVIFYNSSFSNVIN 261
                  FITAQGRT+P+DANGFVFK C VFG GSA+LGRPWRGYSRV+FY S+F+NVI+
Sbjct: 221 ------GFITAQGRTNPSDANGFVFKRCNVFGRGSAYLGRPWRGYSRVLFYQSNFTNVIH 280

Query: 262 PSGWDPWHFVGHE 275
           P GW+ W FV HE
Sbjct: 281 PEGWNAWDFVHHE 284

The following BLAST results are available for this feature:

BLAST of CmoCh17G001080 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PME29_ARATH	5.7e-96	65.06	Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1	[more]
PME55_ARATH	1.5e-88	61.85	Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1	[more]
PME10_ARATH	4.4e-64	50.00	Putative pectinesterase 10 OS=Arabidopsis thaliana GN=PME10 PE=2 SV=1	[more]
PME66_ARATH	6.5e-60	43.43	Probable pectinesterase 66 OS=Arabidopsis thaliana GN=PME66 PE=2 SV=2	[more]
PME11_ARATH	1.6e-53	47.08	Putative pectinesterase 11 OS=Arabidopsis thaliana GN=PME11 PE=3 SV=1	[more]

BLAST of CmoCh17G001080 vs. TrEMBL


Match Name	E-value	Identity	Description
W9SM62_9ROSA	1.1e-106	69.00	Pectinesterase OS=Morus notabilis GN=L484_021593 PE=4 SV=1	[more]
M5Y357_PRUPE	2.2e-102	70.36	Pectinesterase OS=Prunus persica GN=PRUPE_ppa020682mg PE=4 SV=1	[more]
B9RWI7_RICCO	1.8e-101	68.77	Pectinesterase OS=Ricinus communis GN=RCOM_1019830 PE=4 SV=1	[more]
B9IJH0_POPTR	1.5e-100	68.15	Pectinesterase OS=Populus trichocarpa GN=POPTR_0017s08180g PE=4 SV=2	[more]
A0A0B2Q5X6_GLYSO	1.6e-97	64.48	Pectinesterase OS=Glycine soja GN=glysoja_036336 PE=4 SV=1	[more]

BLAST of CmoCh17G001080 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G24130.1	3.2e-97	65.06	Pectin lyase-like superfamily protein	[more]
AT5G18990.1	8.4e-90	61.85	Pectin lyase-like superfamily protein	[more]
AT2G19150.1	2.5e-65	50.00	Pectin lyase-like superfamily protein	[more]
AT2G47280.1	3.7e-61	43.43	Pectin lyase-like superfamily protein	[more]
AT2G21610.1	8.8e-55	47.08	pectinesterase 11	[more]

BLAST of CmoCh17G001080 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659114888\|ref\|XP_008457276.1\|	1.3e-140	83.82	PREDICTED: probable pectinesterase 29 [Cucumis melo]	[more]
gi\|778674132\|ref\|XP_011650140.1\|	9.2e-139	83.09	PREDICTED: probable pectinesterase 29 [Cucumis sativus]	[more]
gi\|703142522\|ref\|XP_010107773.1\|	1.6e-106	69.00	putative pectinesterase 29 [Morus notabilis]	[more]
gi\|596263779\|ref\|XP_007224981.1\|	3.1e-102	70.36	hypothetical protein PRUPE_ppa020682mg [Prunus persica]	[more]
gi\|223542702\|gb\|EEF44239.1\|	2.6e-101	68.77	Pectinesterase U1 precursor, putative [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000070	Pectinesterase_cat
IPR011050	Pectin_lyase_fold/virulence
IPR012334	Pectin_lyas_fold

Vocabulary: **Cellular Component**
Term	Definition
GO:0005618	cell wall

Vocabulary: **Molecular Function**
Term	Definition
GO:0030599	pectinesterase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0042545	cell wall modification

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042545	cell wall modification
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0045490	pectin catabolic process
cellular_component	GO:0005618	cell wall
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0045330	aspartyl esterase activity
molecular_function	GO:0030599	pectinesterase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G001080.1	CmoCh17G001080.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000070	Pectinesterase, catalytic	PFAM	PF01095	Pectinesterase	coord: 29..269 score: 2.2
IPR011050	Pectin lyase fold/virulence factor	unknown	SSF51126	Pectin lyase-like	coord: 27..269 score: 9.91
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 27..269 score: 1.6
None	No IPR available	PANTHER	PTHR31321	FAMILY NOT NAMED	coord: 3..274 score: 3.4E
None	No IPR available	PANTHER	PTHR31321:SF11	PECTINESTERASE 10-RELATED	coord: 3..274 score: 3.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh17G001080	Cucsa.193880	Cucumber (Gy14) v1	cgycmoB0566
CmoCh17G001080	CmaCh17G001040	Cucurbita maxima (Rimu)	cmacmoB353
CmoCh17G001080	Cla002954	Watermelon (97103) v1	cmowmB353
CmoCh17G001080	Csa2G138720	Cucumber (Chinese Long) v2	cmocuB344
CmoCh17G001080	MELO3C020451	Melon (DHL92) v3.5.1	cmomeB331
CmoCh17G001080	ClCG06G007740	Watermelon (Charleston Gray)	cmowcgB325
CmoCh17G001080	CSPI02G09100	Wild cucumber (PI 183967)	cmocpiB351
CmoCh17G001080	Lsi09G011490	Bottle gourd (USVL1VR-Ls)	cmolsiB320
CmoCh17G001080	Cp4.1LG12g00960	Cucurbita pepo (Zucchini)	cmocpeB335
CmoCh17G001080	MELO3C020451.2	Melon (DHL92) v3.6.1	cmomedB381
CmoCh17G001080	CsaV3_2G011500	Cucumber (Chinese Long) v3	cmocucB0417
CmoCh17G001080	Cla97C06G117470	Watermelon (97103) v2	cmowmbB361
CmoCh17G001080	Bhi12G001302	Wax gourd	cmowgoB0457
CmoCh17G001080	CsGy2G009350	Cucumber (Gy14) v2	cgybcmoB189
CmoCh17G001080	Carg10139	Silver-seed gourd	carcmoB0320

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh17G001080	Cucumber (Chinese Long) v3	cmocucB0414
CmoCh17G001080	Cucumber (Chinese Long) v3	cmocucB0420
CmoCh17G001080	Cucumber (Chinese Long) v3	cmocucB0429
CmoCh17G001080	Watermelon (97103) v2	cmowmbB350
CmoCh17G001080	Wax gourd	cmowgoB0474
CmoCh17G001080	Cucurbita moschata (Rifu)	cmocmoB198
CmoCh17G001080	Cucurbita moschata (Rifu)	cmocmoB300
CmoCh17G001080	Cucurbita moschata (Rifu)	cmocmoB303
CmoCh17G001080	Cucurbita moschata (Rifu)	cmocmoB308
CmoCh17G001080	Cucurbita moschata (Rifu)	cmocmoB310
CmoCh17G001080	Cucumber (Gy14) v1	cgycmoB0708
CmoCh17G001080	Cucumber (Gy14) v1	cgycmoB0733
CmoCh17G001080	Cucurbita maxima (Rimu)	cmacmoB251
CmoCh17G001080	Cucurbita maxima (Rimu)	cmacmoB505
CmoCh17G001080	Cucurbita maxima (Rimu)	cmacmoB590
CmoCh17G001080	Cucurbita maxima (Rimu)	cmacmoB887
CmoCh17G001080	Wild cucumber (PI 183967)	cmocpiB347
CmoCh17G001080	Wild cucumber (PI 183967)	cmocpiB353
CmoCh17G001080	Cucumber (Chinese Long) v2	cmocuB340
CmoCh17G001080	Melon (DHL92) v3.5.1	cmomeB336
CmoCh17G001080	Watermelon (Charleston Gray)	cmowcgB315
CmoCh17G001080	Watermelon (97103) v1	cmowmB340
CmoCh17G001080	Cucurbita pepo (Zucchini)	cmocpeB351
CmoCh17G001080	Cucurbita pepo (Zucchini)	cmocpeB364
CmoCh17G001080	Cucurbita pepo (Zucchini)	cmocpeB369
CmoCh17G001080	Cucurbita pepo (Zucchini)	cmocpeB373
CmoCh17G001080	Bottle gourd (USVL1VR-Ls)	cmolsiB345
CmoCh17G001080	Cucumber (Gy14) v2	cgybcmoB186
CmoCh17G001080	Cucumber (Gy14) v2	cgybcmoB187
CmoCh17G001080	Cucumber (Gy14) v2	cgybcmoB317
CmoCh17G001080	Melon (DHL92) v3.6.1	cmomedB385
CmoCh17G001080	Silver-seed gourd	carcmoB1052
CmoCh17G001080	Silver-seed gourd	carcmoB1285
CmoCh17G001080	Silver-seed gourd	carcmoB1448