Csa2G123610 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCATTTCTCCTCTTCCCCTTTTCTGATTTCACTTTATTTATTTCTTCCATCTCACCTTCTAGATCCATTTTTCATCCTATACCCTATTCTACTCTTTTCGGCCATATATCTCATCTCTCATGCACCTCCTTCTGGATCCTTTCATTCTTTGATTTTGTATCTTTTTCATTTAGATGACTCTTGGATTCCAAGAAGCTGAGAAAAGGGGTGTTCCCAATCCCAACCATTTTCTTCATTTGCACCAACCCTCTCAAAATCATTACTATTCCATGGATGGATCCTCCAATAATTCCAATTTCGGTTCCGATTCCACCAATAGGATTACGTATTACGCCGCCGCAGCACAAGACCGGCGTAAGGTTGAGTATTTGCGATCTCTATCCCAGGGGACACCACGTCGATTGGTGCCGGCCGCGAGCTATTTAGGGGTTCTGCTCTGTTTGGCGGCGTCTTTGTTGATTCTTCCGTTGGTTCTACCGCCGCTGCCGCCGCCGCCTTTGATGCTGCTGCTGCTTCTTCCGATTGGGATTTTGGGAATGCTAATGGTGTTAGCGTTTATGCCTTCTAATGACACCAAGGATATAACCTCTTCCTCTCATACATATATGTAATGTAAATGTTCAATCATCTTTTTCTTCCTTTTTTTC ATGACTCTTGGATTCCAAGAAGCTGAGAAAAGGGGTGTTCCCAATCCCAACCATTTTCTTCATTTGCACCAACCCTCTCAAAATCATTACTATTCCATGGATGGATCCTCCAATAATTCCAATTTCGGTTCCGATTCCACCAATAGGATTACGTATTACGCCGCCGCAGCACAAGACCGGCGTAAGGTTGAGTATTTGCGATCTCTATCCCAGGGGACACCACGTCGATTGGTGCCGGCCGCGAGCTATTTAGGGGTTCTGCTCTGTTTGGCGGCGTCTTTGTTGATTCTTCCGTTGGTTCTACCGCCGCTGCCGCCGCCGCCTTTGATGCTGCTGCTGCTTCTTCCGATTGGGATTTTGGGAATGCTAATGGTGTTAGCGTTTATGCCTTCTAATGACACCAAGGATATAACCTCTTCCTCTCATACATATATGTAA ATGACTCTTGGATTCCAAGAAGCTGAGAAAAGGGGTGTTCCCAATCCCAACCATTTTCTTCATTTGCACCAACCCTCTCAAAATCATTACTATTCCATGGATGGATCCTCCAATAATTCCAATTTCGGTTCCGATTCCACCAATAGGATTACGTATTACGCCGCCGCAGCACAAGACCGGCGTAAGGTTGAGTATTTGCGATCTCTATCCCAGGGGACACCACGTCGATTGGTGCCGGCCGCGAGCTATTTAGGGGTTCTGCTCTGTTTGGCGGCGTCTTTGTTGATTCTTCCGTTGGTTCTACCGCCGCTGCCGCCGCCGCCTTTGATGCTGCTGCTGCTTCTTCCGATTGGGATTTTGGGAATGCTAATGGTGTTAGCGTTTATGCCTTCTAATGACACCAAGGATATAACCTCTTCCTCTCATACATATATGTAA MTLGFQEAEKRGVPNPNHFLHLHQPSQNHYYSMDGSSNNSNFGSDSTNRITYYAAAAQDRRKVEYLRSLSQGTPRRLVPAASYLGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKDITSSSHTYM*
BLAST of Csa2G123610 vs. Swiss-Prot
Match: ARL_ARATH (ARGOS-like protein OS=Arabidopsis thaliana GN=ARL PE=2 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.1e-18 Identity = 62/126 (49.21%), Postives = 82/126 (65.08%), Query Frame = 1
BLAST of Csa2G123610 vs. Swiss-Prot
Match: ARGOS_ARATH (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Arabidopsis thaliana GN=ARGOS PE=2 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 3.8e-14 Identity = 52/116 (44.83%), Postives = 67/116 (57.76%), Query Frame = 1
BLAST of Csa2G123610 vs. Swiss-Prot
Match: ARGOS_BRARP (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Brassica rapa subsp. pekinensis GN=ARGOS PE=2 SV=2) HSP 1 Score: 75.9 bits (185), Expect = 4.2e-13 Identity = 56/136 (41.18%), Postives = 76/136 (55.88%), Query Frame = 1
BLAST of Csa2G123610 vs. Swiss-Prot
Match: ARGOS_ORYSJ (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Oryza sativa subsp. japonica GN=ARGOS PE=2 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.8e-09 Identity = 33/56 (58.93%), Postives = 42/56 (75.00%), Query Frame = 1
BLAST of Csa2G123610 vs. Swiss-Prot
Match: ORS1_ARATH (Protein ORGAN SIZE RELATED 1 OS=Arabidopsis thaliana GN=ORS1 PE=2 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 3.8e-06 Identity = 29/53 (54.72%), Postives = 36/53 (67.92%), Query Frame = 1
BLAST of Csa2G123610 vs. TrEMBL
Match: A0A0A0LHQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G123610 PE=4 SV=1) HSP 1 Score: 293.5 bits (750), Expect = 1.4e-76 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 1
BLAST of Csa2G123610 vs. TrEMBL
Match: A0A061ERG1_THECC (Auxin-regulated gene involved in organ size OS=Theobroma cacao GN=TCM_021527 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 2.7e-19 Identity = 59/91 (64.84%), Postives = 71/91 (78.02%), Query Frame = 1
BLAST of Csa2G123610 vs. TrEMBL
Match: B9HGA4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s00290g PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 2.3e-18 Identity = 57/84 (67.86%), Postives = 68/84 (80.95%), Query Frame = 1
BLAST of Csa2G123610 vs. TrEMBL
Match: B9T520_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0385690 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 3.9e-18 Identity = 68/150 (45.33%), Postives = 94/150 (62.67%), Query Frame = 1
BLAST of Csa2G123610 vs. TrEMBL
Match: A0A067K392_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19251 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 3.9e-18 Identity = 57/92 (61.96%), Postives = 75/92 (81.52%), Query Frame = 1
BLAST of Csa2G123610 vs. TAIR10
Match: AT2G44080.1 (AT2G44080.1 ARGOS-like) HSP 1 Score: 94.4 bits (233), Expect = 6.4e-20 Identity = 62/126 (49.21%), Postives = 82/126 (65.08%), Query Frame = 1
BLAST of Csa2G123610 vs. TAIR10
Match: AT3G59900.1 (AT3G59900.1 auxin-regulated gene involved in organ size) HSP 1 Score: 79.3 bits (194), Expect = 2.1e-15 Identity = 52/116 (44.83%), Postives = 67/116 (57.76%), Query Frame = 1
BLAST of Csa2G123610 vs. TAIR10
Match: AT2G41230.1 (AT2G41230.1 unknown protein) HSP 1 Score: 52.8 bits (125), Expect = 2.1e-07 Identity = 29/53 (54.72%), Postives = 36/53 (67.92%), Query Frame = 1
BLAST of Csa2G123610 vs. NCBI nr
Match: gi|700206331|gb|KGN61450.1| (hypothetical protein Csa_2G123610 [Cucumis sativus]) HSP 1 Score: 293.5 bits (750), Expect = 2.0e-76 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 1
BLAST of Csa2G123610 vs. NCBI nr
Match: gi|659082120|ref|XP_008441681.1| (PREDICTED: ARGOS-like protein [Cucumis melo]) HSP 1 Score: 277.7 bits (709), Expect = 1.2e-71 Identity = 138/145 (95.17%), Postives = 141/145 (97.24%), Query Frame = 1
BLAST of Csa2G123610 vs. NCBI nr
Match: gi|590627539|ref|XP_007026465.1| (Auxin-regulated gene involved in organ size [Theobroma cacao]) HSP 1 Score: 103.2 bits (256), Expect = 3.9e-19 Identity = 59/91 (64.84%), Postives = 71/91 (78.02%), Query Frame = 1
BLAST of Csa2G123610 vs. NCBI nr
Match: gi|224095294|ref|XP_002310372.1| (hypothetical protein POPTR_0007s00290g [Populus trichocarpa]) HSP 1 Score: 100.1 bits (248), Expect = 3.3e-18 Identity = 57/84 (67.86%), Postives = 68/84 (80.95%), Query Frame = 1
BLAST of Csa2G123610 vs. NCBI nr
Match: gi|802677453|ref|XP_012081940.1| (PREDICTED: ARGOS-like protein [Jatropha curcas]) HSP 1 Score: 99.4 bits (246), Expect = 5.6e-18 Identity = 57/92 (61.96%), Postives = 75/92 (81.52%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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