CSPI02G08930 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI02G08930
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Auxin-regulated gene involved in organ size
Location	Chr2 : 8557440 .. 8558974 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATAATTTATGGATTAATTTTAAGTGGATGAGTGTTTTAAGAAAATTGGAAGAAGTTAAGTGGATAGTTGATGAATTTTGGAGAGAAAGAAAGGGAAATGAATTAAGAAGCAGAAAAAGAAAGGATGTGTAATGAAAGATTGGAAGAATTATAGGAAGAGAAAAGGAGAAGTATGAGATTAGAAAGGGTAAAGGGGAGGGTGGCGTTGGCGTGATTTAGAAGTAAATGAGTTATAATGGAAATTAAGTAAGGATGAGAAATTGGATTTAATGAAAAAAAAGAAAGAGAGAGAGAAGAAAAGGGAAGGAAAAAGAGGGAAGGGGCTCGGAACCTTGAAAGACAGAGAGAGAGAGAGTGTTCGTTGTGTTTCCAAAACCAGCAAGTTGCATCTTTCCTAAAAGCCCCCACCTTCCCTCTTTCTAATCAAAATTCACTGAACCCAAATCCCCATCTTCCTTCTCTCTCTCTCTCTCTCTTAACGTTTCAGTAAAATTAAAAATCCATATAACAAGACCCCATCAAATCAATATTCATCCCCCTCTTCCTCTCTTCCAATTCACCGCCTCTCTCATCATCATCATCATCATATCATTCCATAAATTCCCCCATTTCTCCTCTTCCCCTTTTCTGATTTCACTTTATTTATTTCTTCCATCTCACCTTCTAGATCCATTTTTCATCCTATACCCTATTCTACTCTTTTCGGCCATATATCTCATCTCTCATGCACCTCCTTCTGGATCTTTTCATTCTTTGATTTTGTATCTTTTTCATTTAGATGACTCTTGGATTCCAAGAAGCTGAGAAAAGGGGTGTTCCCAATCCCAACCATTTTCTTCATTTGCACCAACCCTCTCAAAATCATTACTATTCCATGGATGGATCCTCCAATAATTCCAATTTCGGTTCCGATTCCACCAATAGGATTACGTATTACGCCGCCGCAGCACAAGACCGGCGTAAGGTTGAGTATTTGCGATCTCTATCCCAGGGGACACCACGTCGATTGGTGCCGGCCGCGAGCTATTTAGGGGTTCTGCTCTGTTTGGCGGCGTCTTTGTTGATTCTTCCGTTGGTTCTACCGCCGCTGCCGCCGCCGCCTTTGATGCTGCTGCTGCTTCTTCCGATTGGGATTTTGGGAATGCTAATGGTGTTAGCGTTTATGCCTTCTAATGACACCAAGGATATAACCTCTTCCTCTCATACATATATGTAATGTAAATGTTCAATCATCTTTTTCTTTTTTTTTTTTCTTTTTGGGAAAATTTTGTATGTTCTTTAATTTCTCTTTGCACATCAACAAAAGAAGGGGAAAAAAAAAGGGAGAGATTGAAAATCGGTTCTTTGATTACTCGAAAAAGTTTAATTTGTTAGATTTAATAATGATGATGTGATGAATCTGGCTGCTTCGAATTTTTTATTTACCATTCTTTTATTATTTCTGTTCTTGTGTATCTATACATTGCATTTTCTCACGTTTCAATTCTCTATGATAATGATCTTAATTACTGTGGGTCCTTTCATTTTATGTCTG

mRNA sequence

ATGACTCTTGGATTCCAAGAAGCTGAGAAAAGGGGTGTTCCCAATCCCAACCATTTTCTTCATTTGCACCAACCCTCTCAAAATCATTACTATTCCATGGATGGATCCTCCAATAATTCCAATTTCGGTTCCGATTCCACCAATAGGATTACGTATTACGCCGCCGCAGCACAAGACCGGCGTAAGGTTGAGTATTTGCGATCTCTATCCCAGGGGACACCACGTCGATTGGTGCCGGCCGCGAGCTATTTAGGGGTTCTGCTCTGTTTGGCGGCGTCTTTGTTGATTCTTCCGTTGGTTCTACCGCCGCTGCCGCCGCCGCCTTTGATGCTGCTGCTGCTTCTTCCGATTGGGATTTTGGGAATGCTAATGGTGTTAGCGTTTATGCCTTCTAATGACACCAAGGATATAACCTCTTCCTCTCATACATATATGTAA

Coding sequence (CDS)

ATGACTCTTGGATTCCAAGAAGCTGAGAAAAGGGGTGTTCCCAATCCCAACCATTTTCTTCATTTGCACCAACCCTCTCAAAATCATTACTATTCCATGGATGGATCCTCCAATAATTCCAATTTCGGTTCCGATTCCACCAATAGGATTACGTATTACGCCGCCGCAGCACAAGACCGGCGTAAGGTTGAGTATTTGCGATCTCTATCCCAGGGGACACCACGTCGATTGGTGCCGGCCGCGAGCTATTTAGGGGTTCTGCTCTGTTTGGCGGCGTCTTTGTTGATTCTTCCGTTGGTTCTACCGCCGCTGCCGCCGCCGCCTTTGATGCTGCTGCTGCTTCTTCCGATTGGGATTTTGGGAATGCTAATGGTGTTAGCGTTTATGCCTTCTAATGACACCAAGGATATAACCTCTTCCTCTCATACATATATGTAA

Homology

[Close]

BLAST of CSPI02G08930 vs. Swiss-Prot
Match: ARL_ARATH (ARGOS-like protein OS=Arabidopsis thaliana GN=ARL PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.4e-13
Identity = 62/126 (49.21%), Postives = 84/126 (66.67%), Query Frame = 1


Query: 27  QNHYYSMDGSSNNSNFGSDSTNRITYY--AAAAQDRRKVEYLRSLS-QGTPRRLVPAASY 86
           Q HY      +NN +   D   + T +  +A A    K E  R+LS Q +PRRL+ A+ +
Sbjct: 16  QEHY----SLNNNMDVRGDHNRKNTSFRGSAPAPIMGKQELFRTLSSQNSPRRLISASYF 75

Query: 87  ----LGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKDITS 146
               + VL+ L ASLLILPL+LPPLPPPP MLLL+ PIGI+ +LMVLAFMPS+++K ++S
Sbjct: 76  SLESMVVLVGLTASLLILPLILPPLPPPPFMLLLI-PIGIMVLLMVLAFMPSSNSKHVSS 135

[Close]

BLAST of CSPI02G08930 vs. Swiss-Prot
Match: ARGOS_ARATH (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Arabidopsis thaliana GN=ARGOS PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.1e-09
Identity = 52/116 (44.83%), Postives = 69/116 (59.48%), Query Frame = 1


Query: 34  DGSSNNSNFGSDSTNRITYYAAAAQDRRKVEYLRSLSQGTPRRLVPAASY----LGVLLC 93
           D  SNN        NR      ++ ++ K E  RS S    R ++PA  +    L +L+ 
Sbjct: 17  DSYSNNRVMDVGRNNRKNMSFRSSPEKSKQELRRSFS-AQKRMMIPANYFSLESLFLLVG 76

Query: 94  LAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKDITSSSHTYM 146
           L ASLLILPLVLPPLPPPP M LLL+PIGI+ +L+VLAFMPS+ +   T  +  +M
Sbjct: 77  LTASLLILPLVLPPLPPPPFM-LLLVPIGIMVLLVVLAFMPSSHSNANTDVTCNFM 130

[Close]

BLAST of CSPI02G08930 vs. Swiss-Prot
Match: ARGOS_BRARP (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Brassica rapa subsp. pekinensis GN=ARGOS PE=2 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 9.0e-08
Identity = 56/136 (41.18%), Postives = 78/136 (57.35%), Query Frame = 1


Query: 11  RGVPN-PNHFLHLHQPSQNHYYSMDGSSNNSNFGSDSTNRITYYAAAAQDRRKVEYLRSL 70
           R  PN  N  +++ +   N+     G   NS     + N      A   +  K E  R+ 
Sbjct: 3   RKTPNLQNDIINIQERYSNNLVMDVGGGRNSR---KNVNFRRPPPAMTSENSKHELRRTF 62

Query: 71  SQGTPRRLVPAASY-----LGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLM 130
           S  + +RL+  A+Y     L +L+ L ASLLILPLVLPPLPPPP M LLL+PIGI+ +L+
Sbjct: 63  S--SQKRLMIPANYFSLESLVILVGLTASLLILPLVLPPLPPPPFM-LLLVPIGIMVLLI 122

Query: 131 VLAFMPSNDT--KDIT 139
           +LAFMPS+ +  KD+T
Sbjct: 123 ILAFMPSSSSRAKDVT 132

[Close]

BLAST of CSPI02G08930 vs. TrEMBL
Match: A0A0A0LHQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G123610 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 2.3e-71
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 1


Query: 1   MTLGFQEAEKRGVPNPNHFLHLHQPSQNHYYSMDGSSNNSNFGSDSTNRITYYAAAAQDR 60
           MTLGFQEAEKRGVPNPNHFLHLHQPSQNHYYSMDGSSNNSNFGSDSTNRITYYAAAAQDR
Sbjct: 1   MTLGFQEAEKRGVPNPNHFLHLHQPSQNHYYSMDGSSNNSNFGSDSTNRITYYAAAAQDR 60

Query: 61  RKVEYLRSLSQGTPRRLVPAASYLGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGIL 120
           RKVEYLRSLSQGTPRRLVPAASYLGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGIL
Sbjct: 61  RKVEYLRSLSQGTPRRLVPAASYLGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGIL 120

Query: 121 GMLMVLAFMPSNDTKDITSSSHTYM 146
           GMLMVLAFMPSNDTKDITSSSHTYM
Sbjct: 121 GMLMVLAFMPSNDTKDITSSSHTYM 145

[Close]

BLAST of CSPI02G08930 vs. TrEMBL
Match: A0A061ERG1_THECC (Auxin-regulated gene involved in organ size OS=Theobroma cacao GN=TCM_021527 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.4e-15
Identity = 59/91 (64.84%), Postives = 71/91 (78.02%), Query Frame = 1


Query: 59  DRRKVEYLRSLSQGTPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLMLLLL 118
           +R+KVEY RS SQG  RRL+P + +    L +L+CL ASLLILPL+LPPLPPPP  LLLL
Sbjct: 41  ERKKVEYHRSFSQGGARRLLPVSYFSLESLLLLVCLTASLLILPLILPPLPPPP-FLLLL 100

Query: 119 LPIGILGMLMVLAFMPSNDTKDITSSSHTYM 146
           LPIGIL +LM+LAFMPSN  +DIT   +TYM
Sbjct: 101 LPIGILAVLMILAFMPSN-VRDIT---YTYM 126

[Close]

BLAST of CSPI02G08930 vs. TrEMBL
Match: B9HGA4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s00290g PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.0e-14
Identity = 57/84 (67.86%), Postives = 68/84 (80.95%), Query Frame = 1


Query: 59  DRRKVEYLRSLSQGTPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLMLLLL 118
           ++RK+EY RSLSQG+ RRL+ A+ +    L +L+CL ASLLILPLVLPPLPPPP M LLL
Sbjct: 50  EKRKMEYNRSLSQGSSRRLLTASHFSLVSLLLLVCLTASLLILPLVLPPLPPPPFM-LLL 109

Query: 119 LPIGILGMLMVLAFMPSNDTKDIT 139
           LPIGIL +LM LAFMPSN  +DIT
Sbjct: 110 LPIGILVLLMFLAFMPSN-ARDIT 131

[Close]

BLAST of CSPI02G08930 vs. TrEMBL
Match: A0A067K392_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19251 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.4e-14
Identity = 57/92 (61.96%), Postives = 75/92 (81.52%), Query Frame = 1


Query: 59  DRRKVEYLRSLS-QGTPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLMLLL 118
           +++K+EY RSLS QG+ RRL+P++ +    L +L+CL ASLLILPL+LPPLPPPP  LLL
Sbjct: 56  EQKKMEYQRSLSSQGSARRLLPSSYFSLESLLLLICLTASLLILPLILPPLPPPP-FLLL 115

Query: 119 LLPIGILGMLMVLAFMPSNDTKDITSSSHTYM 146
           LLPIGILG+LM+LAFMP+N  +DIT   +TY+
Sbjct: 116 LLPIGILGVLMILAFMPTN-ARDIT---YTYV 142

[Close]

BLAST of CSPI02G08930 vs. TrEMBL
Match: V4VQI9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022861mg PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 5.9e-14
Identity = 56/86 (65.12%), Postives = 68/86 (79.07%), Query Frame = 1


Query: 59  DRRKVEYLRSLSQGTPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLMLLLL 118
           ++RKVEY RS SQG  R+L  A+ +    L +L+CL ASLLILPLVLPPLPPPP  LLLL
Sbjct: 41  EKRKVEYHRSYSQGASRKLFSASYFTLESLLLLVCLTASLLILPLVLPPLPPPP-FLLLL 100

Query: 119 LPIGILGMLMVLAFMPSNDTKDITSS 141
           +PIGIL +L+VLAFMPSN  +DITS+
Sbjct: 101 VPIGILAVLLVLAFMPSN-VRDITST 124

[Close]

BLAST of CSPI02G08930 vs. TAIR10
Match: AT2G44080.1 (AT2G44080.1 ARGOS-like)

HSP 1 Score: 77.4 bits (189), Expect = 8.1e-15
Identity = 62/126 (49.21%), Postives = 84/126 (66.67%), Query Frame = 1


Query: 27  QNHYYSMDGSSNNSNFGSDSTNRITYY--AAAAQDRRKVEYLRSLS-QGTPRRLVPAASY 86
           Q HY      +NN +   D   + T +  +A A    K E  R+LS Q +PRRL+ A+ +
Sbjct: 16  QEHY----SLNNNMDVRGDHNRKNTSFRGSAPAPIMGKQELFRTLSSQNSPRRLISASYF 75

Query: 87  ----LGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKDITS 146
               + VL+ L ASLLILPL+LPPLPPPP MLLL+ PIGI+ +LMVLAFMPS+++K ++S
Sbjct: 76  SLESMVVLVGLTASLLILPLILPPLPPPPFMLLLI-PIGIMVLLMVLAFMPSSNSKHVSS 135

[Close]

BLAST of CSPI02G08930 vs. TAIR10
Match: AT3G59900.1 (AT3G59900.1 auxin-regulated gene involved in organ size)

HSP 1 Score: 63.5 bits (153), Expect = 1.2e-10
Identity = 52/116 (44.83%), Postives = 69/116 (59.48%), Query Frame = 1


Query: 34  DGSSNNSNFGSDSTNRITYYAAAAQDRRKVEYLRSLSQGTPRRLVPAASY----LGVLLC 93
           D  SNN        NR      ++ ++ K E  RS S    R ++PA  +    L +L+ 
Sbjct: 17  DSYSNNRVMDVGRNNRKNMSFRSSPEKSKQELRRSFS-AQKRMMIPANYFSLESLFLLVG 76

Query: 94  LAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKDITSSSHTYM 146
           L ASLLILPLVLPPLPPPP M LLL+PIGI+ +L+VLAFMPS+ +   T  +  +M
Sbjct: 77  LTASLLILPLVLPPLPPPPFM-LLLVPIGIMVLLVVLAFMPSSHSNANTDVTCNFM 130

[Close]

BLAST of CSPI02G08930 vs. NCBI nr
Match: gi|700206331|gb|KGN61450.1| (hypothetical protein Csa_2G123610 [Cucumis sativus])

HSP 1 Score: 276.2 bits (705), Expect = 3.4e-71
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 1


Query: 1   MTLGFQEAEKRGVPNPNHFLHLHQPSQNHYYSMDGSSNNSNFGSDSTNRITYYAAAAQDR 60
           MTLGFQEAEKRGVPNPNHFLHLHQPSQNHYYSMDGSSNNSNFGSDSTNRITYYAAAAQDR
Sbjct: 1   MTLGFQEAEKRGVPNPNHFLHLHQPSQNHYYSMDGSSNNSNFGSDSTNRITYYAAAAQDR 60

Query: 61  RKVEYLRSLSQGTPRRLVPAASYLGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGIL 120
           RKVEYLRSLSQGTPRRLVPAASYLGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGIL
Sbjct: 61  RKVEYLRSLSQGTPRRLVPAASYLGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGIL 120

Query: 121 GMLMVLAFMPSNDTKDITSSSHTYM 146
           GMLMVLAFMPSNDTKDITSSSHTYM
Sbjct: 121 GMLMVLAFMPSNDTKDITSSSHTYM 145

[Close]

BLAST of CSPI02G08930 vs. NCBI nr
Match: gi|659082120|ref|XP_008441681.1| (PREDICTED: ARGOS-like protein [Cucumis melo])

HSP 1 Score: 260.4 bits (664), Expect = 1.9e-66
Identity = 138/145 (95.17%), Postives = 141/145 (97.24%), Query Frame = 1


Query: 1   MTLGFQEAEKRGVPNPNHFLHLHQPSQNHYYSMDGSSNNSNFGSDSTNRITYYAAAAQDR 60
           MTLGFQEAEKRGVPNPNHFL+LHQPS+NH+Y MD SSNNSNFGSDSTN ITYYAAAAQDR
Sbjct: 1   MTLGFQEAEKRGVPNPNHFLNLHQPSRNHHYFMDASSNNSNFGSDSTNTITYYAAAAQDR 60

Query: 61  RKVEYLRSLSQGTPRRLVPAASYLGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGIL 120
           RKVEYLRS SQGTPRRLVPAASYLGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGIL
Sbjct: 61  RKVEYLRSPSQGTPRRLVPAASYLGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGIL 120

Query: 121 GMLMVLAFMPSNDTKDITSSSHTYM 146
           GMLMVLAFMPSNDTKDITSSSHTYM
Sbjct: 121 GMLMVLAFMPSNDTKDITSSSHTYM 145

[Close]

BLAST of CSPI02G08930 vs. NCBI nr
Match: gi|590627539|ref|XP_007026465.1| (Auxin-regulated gene involved in organ size [Theobroma cacao])

HSP 1 Score: 90.1 bits (222), Expect = 3.4e-15
Identity = 59/91 (64.84%), Postives = 71/91 (78.02%), Query Frame = 1


Query: 59  DRRKVEYLRSLSQGTPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLMLLLL 118
           +R+KVEY RS SQG  RRL+P + +    L +L+CL ASLLILPL+LPPLPPPP  LLLL
Sbjct: 41  ERKKVEYHRSFSQGGARRLLPVSYFSLESLLLLVCLTASLLILPLILPPLPPPP-FLLLL 100

Query: 119 LPIGILGMLMVLAFMPSNDTKDITSSSHTYM 146
           LPIGIL +LM+LAFMPSN  +DIT   +TYM
Sbjct: 101 LPIGILAVLMILAFMPSN-VRDIT---YTYM 126

[Close]

BLAST of CSPI02G08930 vs. NCBI nr
Match: gi|224095294|ref|XP_002310372.1| (hypothetical protein POPTR_0007s00290g [Populus trichocarpa])

HSP 1 Score: 87.0 bits (214), Expect = 2.9e-14
Identity = 57/84 (67.86%), Postives = 68/84 (80.95%), Query Frame = 1


Query: 59  DRRKVEYLRSLSQGTPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLMLLLL 118
           ++RK+EY RSLSQG+ RRL+ A+ +    L +L+CL ASLLILPLVLPPLPPPP M LLL
Sbjct: 50  EKRKMEYNRSLSQGSSRRLLTASHFSLVSLLLLVCLTASLLILPLVLPPLPPPPFM-LLL 109

Query: 119 LPIGILGMLMVLAFMPSNDTKDIT 139
           LPIGIL +LM LAFMPSN  +DIT
Sbjct: 110 LPIGILVLLMFLAFMPSN-ARDIT 131

[Close]

BLAST of CSPI02G08930 vs. NCBI nr
Match: gi|802677453|ref|XP_012081940.1| (PREDICTED: ARGOS-like protein [Jatropha curcas])

HSP 1 Score: 86.3 bits (212), Expect = 4.9e-14
Identity = 57/92 (61.96%), Postives = 75/92 (81.52%), Query Frame = 1


Query: 59  DRRKVEYLRSLS-QGTPRRLVPAASY----LGVLLCLAASLLILPLVLPPLPPPPLMLLL 118
           +++K+EY RSLS QG+ RRL+P++ +    L +L+CL ASLLILPL+LPPLPPPP  LLL
Sbjct: 56  EQKKMEYQRSLSSQGSARRLLPSSYFSLESLLLLICLTASLLILPLILPPLPPPP-FLLL 115

Query: 119 LLPIGILGMLMVLAFMPSNDTKDITSSSHTYM 146
           LLPIGILG+LM+LAFMP+N  +DIT   +TY+
Sbjct: 116 LLPIGILGVLMILAFMPTN-ARDIT---YTYV 142

The following BLAST results are available for this feature:

BLAST of CSPI02G08930 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ARL_ARATH	1.4e-13	49.21	ARGOS-like protein OS=Arabidopsis thaliana GN=ARL PE=2 SV=1	[more]
ARGOS_ARATH	2.1e-09	44.83	Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Arabidopsis thaliana GN=A...	[more]
ARGOS_BRARP	9.0e-08	41.18	Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Brassica rapa subsp. peki...	[more]

BLAST of CSPI02G08930 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHQ4_CUCSA	2.3e-71	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G123610 PE=4 SV=1	[more]
A0A061ERG1_THECC	2.4e-15	64.84	Auxin-regulated gene involved in organ size OS=Theobroma cacao GN=TCM_021527 PE=...	[more]
B9HGA4_POPTR	2.0e-14	67.86	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s00290g PE=4 SV=1	[more]
A0A067K392_JATCU	3.4e-14	61.96	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19251 PE=4 SV=1	[more]
V4VQI9_9ROSI	5.9e-14	65.12	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022861mg PE=4 SV=1	[more]

BLAST of CSPI02G08930 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G44080.1	8.1e-15	49.21	ARGOS-like	[more]
AT3G59900.1	1.2e-10	44.83	auxin-regulated gene involved in organ size	[more]

BLAST of CSPI02G08930 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700206331\|gb\|KGN61450.1\|	3.4e-71	100.00	hypothetical protein Csa_2G123610 [Cucumis sativus]	[more]
gi\|659082120\|ref\|XP_008441681.1\|	1.9e-66	95.17	PREDICTED: ARGOS-like protein [Cucumis melo]	[more]
gi\|590627539\|ref\|XP_007026465.1\|	3.4e-15	64.84	Auxin-regulated gene involved in organ size [Theobroma cacao]	[more]
gi\|224095294\|ref\|XP_002310372.1\|	2.9e-14	67.86	hypothetical protein POPTR_0007s00290g [Populus trichocarpa]	[more]
gi\|802677453\|ref\|XP_012081940.1\|	4.9e-14	61.96	PREDICTED: ARGOS-like protein [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0046622	positive regulation of organ growth
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G08930.1	CSPI02G08930.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36023	FAMILY NOT NAMED	coord: 48..145 score: 2.5
None	No IPR available	PANTHER	PTHR36023:SF3	ARGOS-LIKE PROTEIN-RELATED	coord: 48..145 score: 2.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI02G08930	Csa2G123610	Cucumber (Chinese Long) v2	cpicuB065
CSPI02G08930	MELO3C008515	Melon (DHL92) v3.5.1	cpimeB133
CSPI02G08930	Lsi09G010760	Bottle gourd (USVL1VR-Ls)	cpilsiB090
CSPI02G08930	MELO3C008515.2	Melon (DHL92) v3.6.1	cpimedB126
CSPI02G08930	CsaV3_2G011320	Cucumber (Chinese Long) v3	cpicucB080
CSPI02G08930	Bhi12G001194	Wax gourd	cpiwgoB125
CSPI02G08930	Cucsa.266210	Cucumber (Gy14) v1	cgycpiB403
CSPI02G08930	CsGy2G009200	Cucumber (Gy14) v2	cgybcpiB056

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI02G08930	Wild cucumber (PI 183967)	cpicpiB063
CSPI02G08930	Cucurbita maxima (Rimu)	cmacpiB283
CSPI02G08930	Cucurbita maxima (Rimu)	cmacpiB355
CSPI02G08930	Cucurbita moschata (Rifu)	cmocpiB273
CSPI02G08930	Cucurbita moschata (Rifu)	cmocpiB347
CSPI02G08930	Cucurbita moschata (Rifu)	cmocpiB813
CSPI02G08930	Cucumber (Chinese Long) v2	cpicuB072
CSPI02G08930	Melon (DHL92) v3.5.1	cpimeB145
CSPI02G08930	Watermelon (Charleston Gray)	cpiwcgB154
CSPI02G08930	Watermelon (97103) v1	cpiwmB128
CSPI02G08930	Watermelon (97103) v1	cpiwmB181
CSPI02G08930	Cucurbita pepo (Zucchini)	cpecpiB127
CSPI02G08930	Cucurbita pepo (Zucchini)	cpecpiB165
CSPI02G08930	Bottle gourd (USVL1VR-Ls)	cpilsiB128
CSPI02G08930	Melon (DHL92) v3.6.1	cpimedB139
CSPI02G08930	Silver-seed gourd	carcpiB0772
CSPI02G08930	Silver-seed gourd	carcpiB0996
CSPI02G08930	Cucumber (Chinese Long) v3	cpicucB093
CSPI02G08930	Watermelon (97103) v2	cpiwmbB148