Csa2G004670 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G004670
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 745686 .. 745871 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTAATGGCTTGTTCATTGATTGGGCTGGGCCTGTGCTGGATATGTCTGGAGCATTCAGATATGAAGCCAAAATGACCGATTGGGCTTTGAAAGTTAGCCGTTTGTATGAGCCCTCCTTTTTTAACTGGGCTTGGGCCTATTGTGCTGGTCTATCCGTTGAAATATTTCCGTCAAGCGTGTAA

mRNA sequence

ATGTGTAATGGCTTGTTCATTGATTGGGCTGGGCCTGTGCTGGATATGTCTGGAGCATTCAGATATGAAGCCAAAATGACCGATTGGGCTTTGAAAGTTAGCCGTTTGTATGAGCCCTCCTTTTTTAACTGGGCTTGGGCCTATTGTGCTGGTCTATCCGTTGAAATATTTCCGTCAAGCGTGTAA

Coding sequence (CDS)

ATGTGTAATGGCTTGTTCATTGATTGGGCTGGGCCTGTGCTGGATATGTCTGGAGCATTCAGATATGAAGCCAAAATGACCGATTGGGCTTTGAAAGTTAGCCGTTTGTATGAGCCCTCCTTTTTTAACTGGGCTTGGGCCTATTGTGCTGGTCTATCCGTTGAAATATTTCCGTCAAGCGTGTAA

Protein sequence

MCNGLFIDWAGPVLDMSGAFRYEAKMTDWALKVSRLYEPSFFNWAWAYCAGLSVEIFPSSV*
Homology
[Close]
BLAST of Csa2G004670 vs. TrEMBL
Match: A0A0A0LIT7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G004670 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 2.7e-29
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 1 

Query: 1  MCNGLFIDWAGPVLDMSGAFRYEAKMTDWALKVSRLYEPSFFNWAWAYCAGLSVEIFPSS 60
          MCNGLFIDWAGPVLDMSGAFRYEAKMTDWALKVSRLYEPSFFNWAWAYCAGLSVEIFPSS
Sbjct: 1  MCNGLFIDWAGPVLDMSGAFRYEAKMTDWALKVSRLYEPSFFNWAWAYCAGLSVEIFPSS 60

Query: 61 V 62
          V
Sbjct: 61 V 61

[Close]
BLAST of Csa2G004670 vs. NCBI nr
Match: gi|700205498|gb|KGN60617.1| (hypothetical protein Csa_2G004670 [Cucumis sativus])

HSP 1 Score: 135.2 bits (339), Expect = 3.9e-29
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 1 

Query: 1  MCNGLFIDWAGPVLDMSGAFRYEAKMTDWALKVSRLYEPSFFNWAWAYCAGLSVEIFPSS 60
          MCNGLFIDWAGPVLDMSGAFRYEAKMTDWALKVSRLYEPSFFNWAWAYCAGLSVEIFPSS
Sbjct: 1  MCNGLFIDWAGPVLDMSGAFRYEAKMTDWALKVSRLYEPSFFNWAWAYCAGLSVEIFPSS 60

Query: 61 V 62
          V
Sbjct: 61 V 61

The following BLAST results are available for this feature:
BLAST of Csa2G004670 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LIT7_CUCSA2.7e-29100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G004670 PE=4 SV=1[more]
BLAST of Csa2G004670 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700205498|gb|KGN60617.1|3.9e-29100.00hypothetical protein Csa_2G004670 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G004670.1Csa2G004670.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa2G004670Bhi06G001724Wax gourdcuwgoB131
Csa2G004670CSPI02G01160Wild cucumber (PI 183967)cpicuB065
Csa2G004670CsGy2G001160Cucumber (Gy14) v2cgybcuB056
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G004670Silver-seed gourdcarcuB0042
Csa2G004670Silver-seed gourdcarcuB0139
Csa2G004670Silver-seed gourdcarcuB0598
Csa2G004670Watermelon (97103) v2cuwmbB103
Csa2G004670Watermelon (97103) v2cuwmbB149
Csa2G004670Wax gourdcuwgoB214
Csa2G004670Cucumber (Gy14) v1cgycuB150
Csa2G004670Cucurbita maxima (Rimu)cmacuB075
Csa2G004670Cucurbita maxima (Rimu)cmacuB119
Csa2G004670Cucurbita maxima (Rimu)cmacuB173
Csa2G004670Cucurbita maxima (Rimu)cmacuB791
Csa2G004670Cucurbita moschata (Rifu)cmocuB065
Csa2G004670Cucurbita moschata (Rifu)cmocuB105
Csa2G004670Cucurbita moschata (Rifu)cmocuB157
Csa2G004670Cucurbita moschata (Rifu)cmocuB783
Csa2G004670Melon (DHL92) v3.5.1cumeB090
Csa2G004670Melon (DHL92) v3.5.1cumeB140
Csa2G004670Watermelon (Charleston Gray)cuwcgB096
Csa2G004670Watermelon (Charleston Gray)cuwcgB156
Csa2G004670Watermelon (97103) v1cuwmB162
Csa2G004670Watermelon (97103) v1cuwmB174
Csa2G004670Cucurbita pepo (Zucchini)cpecuB103
Csa2G004670Cucurbita pepo (Zucchini)cpecuB370
Csa2G004670Cucurbita pepo (Zucchini)cpecuB662
Csa2G004670Cucurbita pepo (Zucchini)cpecuB821
Csa2G004670Bottle gourd (USVL1VR-Ls)culsiB098
Csa2G004670Bottle gourd (USVL1VR-Ls)culsiB131
Csa2G004670Melon (DHL92) v3.6.1cumedB109
Csa2G004670Melon (DHL92) v3.6.1cumedB133