CsGy2G001160 (gene) Cucumber (Gy14) v2

Overview
NameCsGy2G001160
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr2 : 761004 .. 761189 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTAATGGCTTGTTCATTGATTGGGCTGGGCCTGTGCTGGATATGTCTGGAGCATTCAGATATGAAGCCAAAATGACCGATTGGGCTTTGAAAGTTAGCCGTTTGTATGAGCCCTCCTTTTTTAACTGGGCTTGGGCCTATTGTGCTGGTCTATCCGTTGAAATATTTCCGTCAAGCGTGTAA

mRNA sequence

ATGTGTAATGGCTTGTTCATTGATTGGGCTGGGCCTGTGCTGGATATGTCTGGAGCATTCAGATATGAAGCCAAAATGACCGATTGGGCTTTGAAAGTTAGCCGTTTGTATGAGCCCTCCTTTTTTAACTGGGCTTGGGCCTATTGTGCTGGTCTATCCGTTGAAATATTTCCGTCAAGCGTGTAA

Coding sequence (CDS)

ATGTGTAATGGCTTGTTCATTGATTGGGCTGGGCCTGTGCTGGATATGTCTGGAGCATTCAGATATGAAGCCAAAATGACCGATTGGGCTTTGAAAGTTAGCCGTTTGTATGAGCCCTCCTTTTTTAACTGGGCTTGGGCCTATTGTGCTGGTCTATCCGTTGAAATATTTCCGTCAAGCGTGTAA

Protein sequence

MCNGLFIDWAGPVLDMSGAFRYEAKMTDWALKVSRLYEPSFFNWAWAYCAGLSVEIFPSSV
Homology
[Close]
BLAST of CsGy2G001160 vs. NCBI nr
Match: KGN60617.1 (hypothetical protein Csa_2G004670 [Cucumis sativus])

HSP 1 Score: 136.7 bits (343), Expect = 2.6e-29
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0 

Query: 1  MCNGLFIDWAGPVLDMSGAFRYEAKMTDWALKVSRLYEPSFFNWAWAYCAGLSVEIFPSS 60
          MCNGLFIDWAGPVLDMSGAFRYEAKMTDWALKVSRLYEPSFFNWAWAYCAGLSVEIFPSS
Sbjct: 1  MCNGLFIDWAGPVLDMSGAFRYEAKMTDWALKVSRLYEPSFFNWAWAYCAGLSVEIFPSS 60

Query: 61 V 62
          V
Sbjct: 61 V 61

[Close]
BLAST of CsGy2G001160 vs. TrEMBL
Match: tr|A0A0A0LIT7|A0A0A0LIT7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004670 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.7e-29
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0 

Query: 1  MCNGLFIDWAGPVLDMSGAFRYEAKMTDWALKVSRLYEPSFFNWAWAYCAGLSVEIFPSS 60
          MCNGLFIDWAGPVLDMSGAFRYEAKMTDWALKVSRLYEPSFFNWAWAYCAGLSVEIFPSS
Sbjct: 1  MCNGLFIDWAGPVLDMSGAFRYEAKMTDWALKVSRLYEPSFFNWAWAYCAGLSVEIFPSS 60

Query: 61 V 62
          V
Sbjct: 61 V 61

The following BLAST results are available for this feature:
BLAST of CsGy2G001160 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN60617.12.6e-29100.00hypothetical protein Csa_2G004670 [Cucumis sativus][more]
BLAST of CsGy2G001160 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy2G001160 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy2G001160 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LIT7|A0A0A0LIT7_CUCSA1.7e-29100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004670 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G001160.1CsGy2G001160.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy2G001160Csa2G004670Cucumber (Chinese Long) v2cgybcuB056
CsGy2G001160CSPI02G01160Wild cucumber (PI 183967)cgybcpiB056
CsGy2G001160CsaV3_2G002250Cucumber (Chinese Long) v3cgybcucB064
CsGy2G001160Bhi06G001724Wax gourdcgybwgoB127
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy2G001160Silver-seed gourdcarcgybB0041
CsGy2G001160Silver-seed gourdcarcgybB0137
CsGy2G001160Silver-seed gourdcarcgybB0573
CsGy2G001160Watermelon (97103) v2cgybwmbB098
CsGy2G001160Watermelon (97103) v2cgybwmbB143
CsGy2G001160Wax gourdcgybwgoB205
CsGy2G001160Cucurbita pepo (Zucchini)cgybcpeB168
CsGy2G001160Cucurbita maxima (Rimu)cgybcmaB154
CsGy2G001160Cucurbita maxima (Rimu)cgybcmaB163
CsGy2G001160Cucurbita maxima (Rimu)cgybcmaB178
CsGy2G001160Cucurbita maxima (Rimu)cgybcmaB257
CsGy2G001160Cucurbita moschata (Rifu)cgybcmoB146
CsGy2G001160Cucurbita moschata (Rifu)cgybcmoB155
CsGy2G001160Cucurbita moschata (Rifu)cgybcmoB170
CsGy2G001160Cucurbita moschata (Rifu)cgybcmoB243
CsGy2G001160Cucurbita pepo (Zucchini)cgybcpeB204
CsGy2G001160Cucurbita pepo (Zucchini)cgybcpeB232
CsGy2G001160Cucurbita pepo (Zucchini)cgybcpeB272
CsGy2G001160Bottle gourd (USVL1VR-Ls)cgyblsiB089
CsGy2G001160Bottle gourd (USVL1VR-Ls)cgyblsiB120
CsGy2G001160Melon (DHL92) v3.5.1cgybmeB095
CsGy2G001160Melon (DHL92) v3.5.1cgybmeB121
CsGy2G001160Melon (DHL92) v3.6.1cgybmedB096
CsGy2G001160Melon (DHL92) v3.6.1cgybmedB119
CsGy2G001160Watermelon (Charleston Gray)cgybwcgB094
CsGy2G001160Watermelon (Charleston Gray)cgybwcgB146
CsGy2G001160Watermelon (97103) v1cgybwmB154
CsGy2G001160Watermelon (97103) v1cgybwmB165