Bhi06G001724 (gene) Wax gourd

Overview
NameBhi06G001724
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr6 : 55649631 .. 55650071 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATCGGTTTCCACGGTTTTGTTTACTTGAGAACCATGGACTTTCGTTCAGTTTATGGTTTGACCCAAAATTGGACCAAATTGAACCACGCCTACTTGTTAGATATATTTGGGAACAAAACCCTTTTCGTATATTTGACGATCGGTAAGGTTTTGATTTCGCCTTTTTACTTGGACCGGTATGGTCGGAGGCCAATTTTGTTATTGGGCTTGACCGGAATGGCTTTGTTCGTTGCTTTGGCTGGGCCTGGGCTCGAAATTTCTGGAGTATTCAGATATGAAACCAAAATGGGCCATTGGGCTTTGCGTGGTGGCCGTTTGTGCAGCCCTGTCGTTGTTTTGTATTGGGCTTGGGCCCATCACGTGGCTTTATTCGTCCGAAATATTCCCGTCAAGATTGCAGGCCGGCCCAAGGTTTTAGCCTGGCGGTCTCGTTGA

mRNA sequence

ATGGAAATCGGTTTCCACGGTTTTGTTTACTTGAGAACCATGGACTTTCGTTCAGTTTATGGTTTGACCCAAAATTGGACCAAATTGAACCACGCCTACTTGTTAGATATATTTGGGAACAAAACCCTTTTCGTATATTTGACGATCGGTAAGGTTTTGATTTCGCCTTTTTACTTGGACCGGTATGGTCGGAGGCCAATTTTGTTATTGGGCTTGACCGGAATGGCTTTGTTCGTTGCTTTGGCTGGGCCTGGGCTCGAAATTTCTGGAGTATTCAGATATGAAACCAAAATGGGCCATTGGGCTTTGCGTGGTGGCCGTTTGTGCAGCCCTGTCGTTGTTTTGTATTGGGCTTGGGCCCATCACGTGGCTTTATTCGTCCGAAATATTCCCGTCAAGATTGCAGGCCGGCCCAAGGTTTTAGCCTGGCGGTCTCGTTGA

Coding sequence (CDS)

ATGGAAATCGGTTTCCACGGTTTTGTTTACTTGAGAACCATGGACTTTCGTTCAGTTTATGGTTTGACCCAAAATTGGACCAAATTGAACCACGCCTACTTGTTAGATATATTTGGGAACAAAACCCTTTTCGTATATTTGACGATCGGTAAGGTTTTGATTTCGCCTTTTTACTTGGACCGGTATGGTCGGAGGCCAATTTTGTTATTGGGCTTGACCGGAATGGCTTTGTTCGTTGCTTTGGCTGGGCCTGGGCTCGAAATTTCTGGAGTATTCAGATATGAAACCAAAATGGGCCATTGGGCTTTGCGTGGTGGCCGTTTGTGCAGCCCTGTCGTTGTTTTGTATTGGGCTTGGGCCCATCACGTGGCTTTATTCGTCCGAAATATTCCCGTCAAGATTGCAGGCCGGCCCAAGGTTTTAGCCTGGCGGTCTCGTTGA

Protein sequence

MEIGFHGFVYLRTMDFRSVYGLTQNWTKLNHAYLLDIFGNKTLFVYLTIGKVLISPFYLDRYGRRPILLLGLTGMALFVALAGPGLEISGVFRYETKMGHWALRGGRLCSPVVVLYWAWAHHVALFVRNIPVKIAGRPKVLAWRSR
Homology
[Close]
BLAST of Bhi06G001724 vs. TrEMBL
Match: tr|A0A0A0LIT7|A0A0A0LIT7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004670 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.5e-04
Identity = 27/58 (46.55%), Postives = 33/58 (56.90%), Query Frame = 0 

Query: 77  LFVALAGPGLEISGVFRYETKMGHWALRGGRLCSPVVVLYWAWAHHVALFVRNIPVKI 135
           LF+  AGP L++SG FRYE KM  WAL+  RL  P     WAWA+   L V   P  +
Sbjct: 5   LFIDWAGPVLDMSGAFRYEAKMTDWALKVSRLYEP-SFFNWAWAYCAGLSVEIFPSSV 61

[Close]
BLAST of Bhi06G001724 vs. NCBI nr
Match: KGN60617.1 (hypothetical protein Csa_2G004670 [Cucumis sativus])

HSP 1 Score: 53.9 bits (128), Expect = 5.3e-04
Identity = 27/58 (46.55%), Postives = 33/58 (56.90%), Query Frame = 0 

Query: 77  LFVALAGPGLEISGVFRYETKMGHWALRGGRLCSPVVVLYWAWAHHVALFVRNIPVKI 135
           LF+  AGP L++SG FRYE KM  WAL+  RL  P     WAWA+   L V   P  +
Sbjct: 5   LFIDWAGPVLDMSGAFRYEAKMTDWALKVSRLYEP-SFFNWAWAYCAGLSVEIFPSSV 61

The following BLAST results are available for this feature:
BLAST of Bhi06G001724 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi06G001724 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi06G001724 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LIT7|A0A0A0LIT7_CUCSA3.5e-0446.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004670 PE=4 SV=1[more]
BLAST of Bhi06G001724 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN60617.15.3e-0446.55hypothetical protein Csa_2G004670 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi06M001724Bhi06M001724mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:1.20.1250.20coord: 3..128
e-value: 1.0E-5
score: 26.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Bhi06G001724Csa2G004670Cucumber (Chinese Long) v2cuwgoB131
Bhi06G001724CSPI02G01160Wild cucumber (PI 183967)cpiwgoB132
Bhi06G001724CsGy2G001160Cucumber (Gy14) v2cgybwgoB127
Bhi06G001724CsaV3_2G002250Cucumber (Chinese Long) v3cucwgoB139
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi06G001724Wax gourdwgowgoB051
Bhi06G001724Cucumber (Gy14) v1cgywgoB197
Bhi06G001724Cucurbita maxima (Rimu)cmawgoB0052
Bhi06G001724Cucurbita maxima (Rimu)cmawgoB0104
Bhi06G001724Cucurbita maxima (Rimu)cmawgoB0186
Bhi06G001724Cucurbita maxima (Rimu)cmawgoB0929
Bhi06G001724Cucurbita moschata (Rifu)cmowgoB0046
Bhi06G001724Cucurbita moschata (Rifu)cmowgoB0096
Bhi06G001724Cucurbita moschata (Rifu)cmowgoB0183
Bhi06G001724Cucurbita moschata (Rifu)cmowgoB0932
Bhi06G001724Cucurbita pepo (Zucchini)cpewgoB0128
Bhi06G001724Cucurbita pepo (Zucchini)cpewgoB0433
Bhi06G001724Cucurbita pepo (Zucchini)cpewgoB0830
Bhi06G001724Cucurbita pepo (Zucchini)cpewgoB1019
Bhi06G001724Bottle gourd (USVL1VR-Ls)lsiwgoB103
Bhi06G001724Bottle gourd (USVL1VR-Ls)lsiwgoB474
Bhi06G001724Melon (DHL92) v3.6.1medwgoB275
Bhi06G001724Melon (DHL92) v3.6.1medwgoB464
Bhi06G001724Melon (DHL92) v3.5.1mewgoB273
Bhi06G001724Melon (DHL92) v3.5.1mewgoB462
Bhi06G001724Watermelon (Charleston Gray)wcgwgoB146
Bhi06G001724Watermelon (Charleston Gray)wcgwgoB513
Bhi06G001724Watermelon (97103) v2wgowmbB119
Bhi06G001724Watermelon (97103) v2wgowmbB140
Bhi06G001724Watermelon (97103) v1wgowmB147
Bhi06G001724Watermelon (97103) v1wgowmB155
Bhi06G001724Silver-seed gourdcarwgoB0038
Bhi06G001724Silver-seed gourdcarwgoB0155
Bhi06G001724Silver-seed gourdcarwgoB0677