Csa2G004120 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G004120
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 705093 .. 708249 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTTTCGTTACACTGCCTCAAAGCTTCACTCAGAACGAAGAAATCTCCAATGGCGTCCTTAAAAGCAGTTTCTCGGTTATCATCCCGCTTGCAATCACTCGCTCCAAAGTTCAACAAAAGGTCTTCATCTTCTGAGCTATTTTCATTCAAATCTACTTGTCAATCTCAGCCTTCCGCAGCTTCTACATCGCGTCTTCATTGTACTTCGCGGTTAGACTTGTCTATTCCCTCCATTTTCAATACCATTCATCTTATAATCATAGAATCATCAGTTACAGAAAGAAATTCGGTTCAATTCTTAACCGTGGAATAGATTTTTACCACAGGTTACCAGTGGAGTTGAGTAGTCAGGGGTCATTGATGCCATTGCACAGCGCTATAGCTGCAGCTAGATTAATTTCAAGTCTGACCATTGAATCTCAAGGATGGGGTTTGGTTCCTCAGGGTATGTTTTGCTTAAGTTTCTTCTTGCATCTGGGTCTTGTGAATGCTGATGATTCTCCATTATTGTATGTGCTCGAGGAATGTAGCCAAAGAAGCATTCCAAATATCCTTTTGTTTGTTCACACTTCATAGAATTTTTTTCTCTCGAAATAATGTGGGTTATTTTTTTCATTTTTAGGATGATCATAGTTTGGGTCTAGTTCAATGCATATGTCTTGCGGAATTCTAGTACGATTGAGTTAATCGGCATGGTGTTTGCCTGTACTACTAGAATTGTCATGACCTTTGAATTGTGATTAGAGTCACATAAATGAAAATGATGGATGGAATACATCACTTTGATTGGTGTATGAAGGCACATGCAATCAACTTTAGTATTTGAACGAAAATTTAATATAACTGATCATACATACGAAGTAGCGATAGTTGATTTCACAGGTTTAGCATTAGTCTAGTTTTTCAACACCTTAACTGTGGTCGATTACTTTTATGTGTTGACTCTTCTAGTTTTTCACCAAGCTTCAAAGTAGTATCAACTATCATCAAGTGATGTTGTTTTCAACTAGTTGATGATTAAGAATATTTCTGTTGTTCAATTTATGAACCCTTACAATAAATTGTGATGCTATCTCAACATTAGTGTCATTGTATCATTTTTATTCTATCTATTATTACCACTGTCTGAAATGTGAGTCCCGTACTAATTCTATCTATTATTACCGTATCTTAGTTATTTTCAATGGATATCACTTGATCCTACACTCCACAGTACTAGAGAACTTAGAATTAATGGTTGTCATGACTCATGGGTCGTCTCTAAACAAGCTTTTGGTGGGTGCAAGTGTTTGGACTATTTGGCCGGAAAGTATTCAAAGAAATGGGATTGTTGAACATTTATGTTTTCTCCACCTGCAATAGACTTTTGAACCTTTTGAACCTCTTTTGTTATTTGAGTTATTGTAGTTTTTATTCAATTGGTGTTAAAGTTAAGAGCAGGGAGAGTTCCTTTTTTGTGTGGGCGTTTAATTTGTGGCTGTCCCCTTCACCCCCCACCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCAATGTAAAATCCTCCTTTGGACAAATACCTTCTTCATTCAAATGTTGTCACATCTCATGGTGACAATAAAACTATCTTTTGTTCTATTGAAGAGAGTAATGTATTTGATATCTTTTGTTCTCTGTAAAAAAAAACATTACTAATTTCCAATGGGATGATACCCTAGAAGTTGGTAGCATAATTGTTTATTACTCCGCTTGCTCCTGCACCCTCAAATGGTATATGCTTGTTCGGTTGGCTATGAGGATAACAACTCTTTTGTTGTTGTTCATTCTTTGCTGGTTCACTGGGAAGTTTTGGGGGTTGCTATTTTGTTTTTGTGGTCTTGGGTAGCTCTTCCAAAAACGAAGCTGTATACTTCAGATGCTACTACGTTCAAAATTCAGAAACCAGGCTAAATCAATCTAGACTAATGCGATATTGATTATCTCTGTGTGAGGCTTGGAGAGTGAAAATAGTAGGAATTGTTGCAAAAATCGAGGTAATCAAATTGTTGGCATCTAAACTTCAGTTAGATGTCTAGTAGCCTTTCTCATCCCTTTTGTTTTCTTTACAGTATTTGTAATACAGAGTTTATCTCGAGAAAAGTTACTATTTTTGTCTTCCCAATAATAAACACTAATGAAAACTTCTGTGCTTGACAACGAGAAGAGTAAGAGTGTGAAAGTGCAGGCTAAAGAAAAACATCTTGGGGCGTTTGTGGCACTAGTTCAGCATCTTCAAGCCTAGGTTTAATGTGTTTAGGGGTTTAGGTTGATGGTTAGGGAAGTCGTTGGGGTTCAGGTTTTGGAAGCATAGATTTAAATCAGTGTGAACCGTGAGGGGGTTTGAATAGTGGGTTATTGTTCAAACTCGTTTGTTCCTCTTATAAAATTCGGTTTTGAAAACTCCTCATTCTAAACATTGTTTAGGCTTGGATAGCTAAACCCATGTCCCAAATGCTTCTTTACAGCTGTAACGTTATATTATCTTTGCCCTTTGGTCACAAAATGACTTCTGAGTACTAACATTAATTTTTGTTAATTTCATTCATGGGAGAAAGTTATGCATCCAATTTTGTAGTTCATCATTTCAAGTAGTTTCATGCAAGACAAGAACCCTCTTTGATGCTGTTTTATCTTTCCTGCAGGTATTTCAATGCCTTTATGACAGGCTTTGCTATGCAGGAACTTGTTCTTTGTAGCTTTCTTTTGATTGACAATTGGGGTTTCTTCTTACTTCTAGTTCTTTACAATCTACAAGAATGTAAACCTAAATTATTGCCTCTGATTTTCTTTTTGGTCCTAAATTGGATGAGGTTTAAAGTTAAATTTCATCTTGTAATGAATCCAAGTGATTGATATACAACTTTCATGATTGTTGAATTTGTTACCCTTGGAAAAGATGATGTAACGATGCTTTGAAGGACAATCTTGTTACAAATAGAATGGTTATGGATTCTTCCTCTAGGA

mRNA sequence

ATGGCGTCCTTAAAAGCAGTTTCTCGGTTATCATCCCGCTTGCAATCACTCGCTCCAAAGTTCAACAAAAGGTCTTCATCTTCTGAGCTATTTTCATTCAAATCTACTTGTCAATCTCAGCCTTCCGCAGCTTCTACATCGCGTCTTCATTGTACTTCGCGGTTACCAGTGGAGTTGAGTAGTCAGGGGTCATTGATGCCATTGCACAGCGCTATAGCTGCAGCTAGATTAATTTCAAGTCTGACCATTGAATCTCAAGGATGGGGTTTGGTTCCTCAGGGTATTTCAATGCCTTTATGA

Coding sequence (CDS)

ATGGCGTCCTTAAAAGCAGTTTCTCGGTTATCATCCCGCTTGCAATCACTCGCTCCAAAGTTCAACAAAAGGTCTTCATCTTCTGAGCTATTTTCATTCAAATCTACTTGTCAATCTCAGCCTTCCGCAGCTTCTACATCGCGTCTTCATTGTACTTCGCGGTTACCAGTGGAGTTGAGTAGTCAGGGGTCATTGATGCCATTGCACAGCGCTATAGCTGCAGCTAGATTAATTTCAAGTCTGACCATTGAATCTCAAGGATGGGGTTTGGTTCCTCAGGGTATTTCAATGCCTTTATGA

Protein sequence

MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL*
Homology
[Close]
BLAST of Csa2G004120 vs. TrEMBL
Match: A0A0A0LKT5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G004120 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.5e-45
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 1 

Query: 1   MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60
           MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS
Sbjct: 1   MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 61  SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL 100
           SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL
Sbjct: 61  SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL 99

[Close]
BLAST of Csa2G004120 vs. TrEMBL
Match: M5VRS8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013894mg PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 6.2e-23
Identity = 65/99 (65.66%), Postives = 73/99 (73.74%), Query Frame = 1 

Query: 1   MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60
           MAS K VSRLSSRLQ      NK S +SEL   KS+  SQ SA +  R+   SRLP EL 
Sbjct: 1   MASYKVVSRLSSRLQPFTCNLNKTSLASELSQLKSSLHSQTSAPAR-RISRLSRLPSELG 60

Query: 61  SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL 100
           S GS+MPLHSA+A+ARLISSL+IESQ WGLVPQGISMPL
Sbjct: 61  SVGSMMPLHSAVASARLISSLSIESQSWGLVPQGISMPL 98

[Close]
BLAST of Csa2G004120 vs. TrEMBL
Match: W9SBX8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009267 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.2e-21
Identity = 63/99 (63.64%), Postives = 74/99 (74.75%), Query Frame = 1 

Query: 1   MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60
           MAS + +SRLSSRL+  A   NKRS +SE  S KS   S+ S   T R   TSRLP++LS
Sbjct: 1   MASSRVLSRLSSRLKPFACNSNKRSLASEFSSLKSASFSEASLL-TGRFRRTSRLPLQLS 60

Query: 61  SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL 100
           S  S+MPLHSA+A+ARLISSL+IESQ WGLVPQGISMPL
Sbjct: 61  SVESMMPLHSAVASARLISSLSIESQHWGLVPQGISMPL 98

[Close]
BLAST of Csa2G004120 vs. TrEMBL
Match: A9P8Y4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s08930g PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 8.3e-20
Identity = 58/101 (57.43%), Postives = 74/101 (73.27%), Query Frame = 1 

Query: 1   MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSA--ASTSRLHCTSRLPVE 60
           MAS K VSRLS+RLQ    K NK+S S+EL S KS+    P +  A+T RL  +SRLP++
Sbjct: 1   MASTKVVSRLSTRLQPFLFKLNKKSLSAELSSLKSSSLPTPVSVPATTRRLSRSSRLPLQ 60

Query: 61  LSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL 100
           LS   S++PLHSA+A+A+LISSL+ ES  W LVPQG+SMPL
Sbjct: 61  LSCVESMLPLHSAVASAKLISSLSSESDSWALVPQGVSMPL 101

[Close]
BLAST of Csa2G004120 vs. TrEMBL
Match: D7SUD1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g03710 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 5.4e-19
Identity = 58/99 (58.59%), Postives = 70/99 (70.71%), Query Frame = 1 

Query: 1   MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60
           MA+   +SRLS R  SLA KF  RS+   +   KS+ QSQ SA ST R     RLPV++S
Sbjct: 1   MAASTVLSRLSCRSSSLALKFASRSTKPSVSPLKSSSQSQVSA-STKRTSRIPRLPVQMS 60

Query: 61  SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL 100
           S  S+MPLHSAIA+ARL S L++ESQ WGL+PQGISMPL
Sbjct: 61  SLVSMMPLHSAIASARLTSVLSVESQSWGLIPQGISMPL 98

[Close]
BLAST of Csa2G004120 vs. TAIR10
Match: AT3G13674.1 (AT3G13674.1 unknown protein)

HSP 1 Score: 90.5 bits (223), Expect = 6.3e-19
Identity = 55/101 (54.46%), Postives = 74/101 (73.27%), Query Frame = 1 

Query: 1   MASLKAVSRLSSRLQSLAPKF-NKRSSSSELFS-FKSTCQSQPSAASTSRLHCTSRLPVE 60
           MAS + + R SSRL+SL     NK ++ S L S  KS   + PS+A++ RL+ +SRLPVE
Sbjct: 1   MASSRVLGRFSSRLKSLCQNLSNKNANVSSLPSPIKS---ASPSSATSCRLNRSSRLPVE 60

Query: 61  LSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL 100
           LSS   ++PLHSAIA++RL+SSL++ES+ WGLVPQG+S+PL
Sbjct: 61  LSS---MIPLHSAIASSRLVSSLSVESKIWGLVPQGLSLPL 95

[Close]
BLAST of Csa2G004120 vs. TAIR10
Match: AT1G55205.2 (AT1G55205.2 unknown protein)

HSP 1 Score: 88.6 bits (218), Expect = 2.4e-18
Identity = 49/96 (51.04%), Postives = 67/96 (69.79%), Query Frame = 1 

Query: 1  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60
          MAS   + RLSS++ SL  K +K  ++  + S  S  +S   +++TSR++ + RLPVELS
Sbjct: 1  MASSSKICRLSSKIHSLTQKLSK--TNVHISSLPSPIKSSSPSSATSRINQSFRLPVELS 60

Query: 61 SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGIS 97
             S++PLHSAIA+ARLISSL++ES+ WGLVPQG S
Sbjct: 61 CCLSMLPLHSAIASARLISSLSVESKSWGLVPQGQS 94

[Close]
BLAST of Csa2G004120 vs. TAIR10
Match: AT4G39300.1 (AT4G39300.1 unknown protein)

HSP 1 Score: 54.7 bits (130), Expect = 3.8e-08
Identity = 28/76 (36.84%), Postives = 44/76 (57.89%), Query Frame = 1 

Query: 24  RSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTI 83
           R+ + +  + K T  S P A+ +  +   SR+   L S  +++PLHSA+A+ARL SS+  
Sbjct: 21  RTVTQKSLNLKPTTTSSPFASMSQSIPRASRVLSALGSVETMIPLHSAVASARLRSSIAA 80

Query: 84  ESQGWGLVPQGISMPL 100
           +S  W L+ QG++ PL
Sbjct: 81  DSSCWSLLSQGLATPL 96

[Close]
BLAST of Csa2G004120 vs. NCBI nr
Match: gi|449443153|ref|XP_004139345.1| (PREDICTED: uncharacterized protein LOC101209110 isoform X2 [Cucumis sativus])

HSP 1 Score: 189.9 bits (481), Expect = 2.2e-45
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 1 

Query: 1   MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60
           MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS
Sbjct: 1   MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 61  SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL 100
           SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL
Sbjct: 61  SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL 99

[Close]
BLAST of Csa2G004120 vs. NCBI nr
Match: gi|659071160|ref|XP_008458440.1| (PREDICTED: uncharacterized protein LOC103497847 isoform X1 [Cucumis melo])

HSP 1 Score: 185.7 bits (470), Expect = 4.1e-44
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 1 

Query: 1   MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60
           MASLKAVSRLSSRLQSL+PKFNKRSSSSELFS KSTCQSQPSAASTSRLHCTSRLPVELS
Sbjct: 1   MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 61  SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL 100
           SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL
Sbjct: 61  SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL 99

[Close]
BLAST of Csa2G004120 vs. NCBI nr
Match: gi|778665907|ref|XP_011648655.1| (PREDICTED: uncharacterized protein LOC101209110 isoform X1 [Cucumis sativus])

HSP 1 Score: 178.3 bits (451), Expect = 6.5e-42
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1 

Query: 1  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60
          MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS
Sbjct: 1  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 61 SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ 94
          SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
Sbjct: 61 SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ 93

[Close]
BLAST of Csa2G004120 vs. NCBI nr
Match: gi|659071162|ref|XP_008458447.1| (PREDICTED: uncharacterized protein LOC103497847 isoform X2 [Cucumis melo])

HSP 1 Score: 174.1 bits (440), Expect = 1.2e-40
Identity = 91/93 (97.85%), Postives = 92/93 (98.92%), Query Frame = 1 

Query: 1  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60
          MASLKAVSRLSSRLQSL+PKFNKRSSSSELFS KSTCQSQPSAASTSRLHCTSRLPVELS
Sbjct: 1  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 61 SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ 94
          SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
Sbjct: 61 SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ 93

[Close]
BLAST of Csa2G004120 vs. NCBI nr
Match: gi|645275143|ref|XP_008242671.1| (PREDICTED: uncharacterized protein LOC103340977 [Prunus mume])

HSP 1 Score: 116.3 bits (290), Expect = 3.0e-23
Identity = 66/99 (66.67%), Postives = 73/99 (73.74%), Query Frame = 1 

Query: 1   MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60
           MAS K VSRLSSRLQ      NK S +SEL   KST  SQ SA +  R+   SRLP EL 
Sbjct: 1   MASYKVVSRLSSRLQPFTCNLNKTSLASELSQLKSTLHSQTSAPAR-RISRLSRLPSELG 60

Query: 61  SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL 100
           S GS+MPLHSA+A+ARLISSL+IESQ WGLVPQGISMPL
Sbjct: 61  SVGSMMPLHSAVASARLISSLSIESQSWGLVPQGISMPL 98

The following BLAST results are available for this feature:
BLAST of Csa2G004120 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKT5_CUCSA1.5e-45100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G004120 PE=4 SV=1[more]
M5VRS8_PRUPE6.2e-2365.66Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013894mg PE=4 SV=1[more]
W9SBX8_9ROSA1.2e-2163.64Uncharacterized protein OS=Morus notabilis GN=L484_009267 PE=4 SV=1[more]
A9P8Y4_POPTR8.3e-2057.43Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s08930g PE=2 SV=1[more]
D7SUD1_VITVI5.4e-1958.59Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g03710 PE=4 SV=... [more]
BLAST of Csa2G004120 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G13674.16.3e-1954.46 unknown protein[more]
AT1G55205.22.4e-1851.04 unknown protein[more]
AT4G39300.13.8e-0836.84 unknown protein[more]
BLAST of Csa2G004120 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449443153|ref|XP_004139345.1|2.2e-45100.00PREDICTED: uncharacterized protein LOC101209110 isoform X2 [Cucumis sativus][more]
gi|659071160|ref|XP_008458440.1|4.1e-4497.98PREDICTED: uncharacterized protein LOC103497847 isoform X1 [Cucumis melo][more]
gi|778665907|ref|XP_011648655.1|6.5e-42100.00PREDICTED: uncharacterized protein LOC101209110 isoform X1 [Cucumis sativus][more]
gi|659071162|ref|XP_008458447.1|1.2e-4097.85PREDICTED: uncharacterized protein LOC103497847 isoform X2 [Cucumis melo][more]
gi|645275143|ref|XP_008242671.1|3.0e-2366.67PREDICTED: uncharacterized protein LOC103340977 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU086547cucumber EST collection version 3.0transcribed_cluster
CU096265cucumber EST collection version 3.0transcribed_cluster
CU174762cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G004120.1Csa2G004120.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU174762CU174762transcribed_cluster
CU086547CU086547transcribed_cluster
CU096265CU096265transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33156FAMILY NOT NAMEDcoord: 7..99
score: 3.9
NoneNo IPR availablePANTHERPTHR33156:SF1SUBFAMILY NOT NAMEDcoord: 7..99
score: 3.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa2G004120Cla016772Watermelon (97103) v1cuwmB162
Csa2G004120MELO3C004564Melon (DHL92) v3.5.1cumeB140
Csa2G004120ClCG11G002390Watermelon (Charleston Gray)cuwcgB096
Csa2G004120Lsi11G002550Bottle gourd (USVL1VR-Ls)culsiB098
Csa2G004120MELO3C004564.2Melon (DHL92) v3.6.1cumedB133
Csa2G004120Cla97C11G208810Watermelon (97103) v2cuwmbB103
Csa2G004120Bhi06G001717Wax gourdcuwgoB131
Csa2G004120CSPI02G01100Wild cucumber (PI 183967)cpicuB065
Csa2G004120Cucsa.116410Cucumber (Gy14) v1cgycuB150
Csa2G004120CmaCh05G013420Cucurbita maxima (Rimu)cmacuB791
Csa2G004120CmoCh05G013510Cucurbita moschata (Rifu)cmocuB783
Csa2G004120CmoCh12G012870Cucurbita moschata (Rifu)cmocuB157
Csa2G004120Cp4.1LG11g11160Cucurbita pepo (Zucchini)cpecuB103
Csa2G004120Cp4.1LG07g10170Cucurbita pepo (Zucchini)cpecuB821
Csa2G004120CsGy2G001090Cucumber (Gy14) v2cgybcuB056
Csa2G004120Carg18580Silver-seed gourdcarcuB0914
Csa2G004120Carg10860Silver-seed gourdcarcuB0598
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G004120Silver-seed gourdcarcuB0042
Csa2G004120Silver-seed gourdcarcuB0139
Csa2G004120Silver-seed gourdcarcuB0217
Csa2G004120Watermelon (97103) v2cuwmbB149
Csa2G004120Watermelon (97103) v2cuwmbB156
Csa2G004120Wax gourdcuwgoB144
Csa2G004120Wax gourdcuwgoB214
Csa2G004120Cucurbita maxima (Rimu)cmacuB075
Csa2G004120Cucurbita maxima (Rimu)cmacuB119
Csa2G004120Cucurbita maxima (Rimu)cmacuB173
Csa2G004120Cucurbita moschata (Rifu)cmocuB065
Csa2G004120Cucurbita moschata (Rifu)cmocuB105
Csa2G004120Melon (DHL92) v3.5.1cumeB129
Csa2G004120Watermelon (Charleston Gray)cuwcgB156
Csa2G004120Watermelon (Charleston Gray)cuwcgB163
Csa2G004120Watermelon (97103) v1cuwmB119
Csa2G004120Watermelon (97103) v1cuwmB174
Csa2G004120Cucurbita pepo (Zucchini)cpecuB370
Csa2G004120Cucurbita pepo (Zucchini)cpecuB662
Csa2G004120Bottle gourd (USVL1VR-Ls)culsiB131
Csa2G004120Melon (DHL92) v3.6.1cumedB109