Carg10860 (gene) Silver-seed gourd

Overview
NameCarg10860
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionProtein NUCLEAR FUSION DEFECTIVE 6 like
LocationCucurbita_argyrosperma_scaffold_034 : 523665 .. 528842 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTCCTTAAGGGCAGTCTCTCGGCTATCATCTCGCCTGCAATCTCTCGCTCCAAAGCTCAACAAAAGGTCTCCATCTTCTGAGCTCTCTCCATTCAAATCGGCTTGTCAATCTCAGCCCTCTGCAGCTTCTACATCGCGTGTTTCTTGCACTTCGCGGTGAGACTTGTCTCTTTTCTCCATTTCCAATCTCATTTGTCATTTCATCAAATAATCATTACAGAAATGGATTCGGTTCAATTCCTTACTATGGAATAGATTTTTGCAATAGGTTACCATTGGAGTTGAGTAGTCAGGGGTCACTGATGCCATTGCACAGCGCTATAGCTGCAGCTAGATTGATTTCGAGTCTGAGCATTGAATCTCAAGGATGGGGGCTGGTTCCTCAGGGTATGTTCTTGCACTTGATTCTTGTGAATGCTAATGATTCTCCTTAATTGTTTTTGCTCGAGGAATGTTGCTAAGGAAGTGTTCCGAATATCCGTTTGTTTGTTCGCACTTCATAGATTTTTTTCTCTCTTAAATAATGTCGGATATTTTTTAGTATCTGTTCATAGTTCGAATCAAGTTCAATGCACATGTCTTGCTGAATTCCAGTACGATTGAATTAATCGTGGATATTTAGCGACGTTGCTGATTGCCTGTACTACTAGAATTTCCGTCACCTTTGAATTGCGATTAGAGTCATATAGGTGAAAATGATAGATAGAAAACATCACTTTGACTGGTGTATGAAGGAAACAAGCGGAATGATGCAATAAATTTCAGTATTTGAATGAAAGTTTAATATAATTGATCATTTATAAGAAGTAGCCTTAGTCGACTGCAGAATTTTAGCATTAATCTACTTTTTTTACAACTTGGCTGATGCAGTTTATGTTTATGTGTTGACTCTTCTTATTTATCACCAAGCTTCAAAATATACTCGAGTTGCGTTCAACTAGTTGATGATAGAGAATTTTTCCGATCTTCAATTTATGTAACCTTAAAAAAGAAAAGAAAAATTGTGTTGCACATCTCAATAGGAGTGTTATCATATCATTTTTATTCTATCTATTATTACCGCTGTCTAAGATGTGAGTGTATACCCATACTAATTTATGCACATCTCAGTGATTTTCAATGGAGTATCACTTGATCCTACAATCCATAGAACTATATCTCTTCAAATTTGTGTGCGCGGGGACGTATAATTCTTGGTTAATTGGGAGGTACTCTTAATCCATGTAAAATTCTCCTGTGTACAAGCACCTCCTTTTCTTCCTCAGATGTTGTCACATCTCATGGTGACAACAAAAATACCCGAAGAAAGTAATCTATTTGACATGTTTTGTTCTTTGTAAAAAAGTAAACATTACTAACTTCCAATTGCAAGAAGTTTGTGGCATCATTGTTTATTACCCCTCCTACACCTGAACCCTCATAATGTGTGCTTGTTTTGGGTGGCTAGGATGACAGTGACTCGTTGTTCATTCTCTGCGGGTTCACTGGGAAGTTTTGGGGATTGTTATTTGTTTTTATGGATTTGGGTAGCTCTTCCAAAACCTGAGTTGTACGTCAGATGCTACTTTCAAAATCCAGAAACCAGGCTAAATCTATCTAGACTGATGCTATATTGCTAATCTTTTTAAGGCTTAAAAAGTGAAAAAAGTAGGAATTTTCACGATAATCAAGATAATCAATTTTTGGCATCTTTCTTGGCTCTTAAACTTTGGTTAGATGTCTAGGACTCTTATCTCCTCCTTTATTCAGAGTTTATTCTGAAGAAATATCTCTTAATTCCCCAAAAGAAACACAAATCGAAACTTTCGTTCTTGAGAACAAGAAGAGTGTGAAAGTAGGGGGTAAAGAAAATCATTTCGGGGGTGTTTCAGGCATTGGTTTAGTATGTCTAGGGGTTTAAGTTAAAGGTTTGGGAAGTCGTTGGGATGCAGCTTTAGAAAGCATAGACTAAGAAAAACTTTGTGGGGTTATTGTTCAAACTCGATCGTTTCTCCAATAAATTCAGTTTTGGAAACTTGTCATCCTAAACATTGGTCAGGCTTGGGAAGCCAAACCGATACCTCAAAGGCCTCTTCACAGGTGTAGGGTTATTATCTTTGTTCTTTGGTCTCATAATAAGTTGTTACAAGTGTCTTCTGGCATTAACTTTTGCTAATTTCATTTATGGGAGAAAGTTATGGATGCAAGTTTATAGATCATCATTTTAAGTACTTTCCTGCACGACGATTCATTTGTTAGAAGATCCGTCTTTGACATTGTTTTGTCTTTCCTGCAGGTATTTCAATGCCTTTATGACGGCTTTACTTTGCAGTAAGTTGTTCTCTGTACTTCTCTGTTTGTTGACTATTAGGGTTTCTTTGTACTCTTAGCTCCCTACAAGAATATAAACCTTAATCATCGACTCTAAATTTCTTTTGTCCTAAATGTGGCTGAGGTTTAAAGTTACATTTCATCTTAGTAGTGATGAAATTCATTAAAGTGATTCAGCAGATACTTATTTGCTGGCATTTTACTCAAATGAAACAAGTTAATGTTGCAAGTGATTGATATACAAACTTTCATGATTGTAGGAGTTATTACCCTTGGAAAGGGCATGTTGGCATGCTGAATTTTATGATTAGATGTGTATGCATGACTTGAATGACATCTTGTTGCAATGCAATGATCTTGAATTCATTCTCCTAGACAAGTTCCTAGCCAAGTTCTATTGAAGTTTTAGGAATTCAGCTACATAGACATGTATTGGTTTTTAGGTTTAGCATGTATCGGTTTTTAGGTTTAGGTCTTTGAAAATTAAGCTTGTAAACACCACTTCCATTGTTTCATTGTTTTGTTTTTGTCACCGACTTTCTAGCCATATTTTCAAAATTTATGCCAAGTTTTTTTTAAAAAAAATTAAGCCCCATTTGACAATAACGATTTTGTTTTTAGTTTTTAGTTTTTGAAATTTATGCTTGTTTCCTTCCAATTTTTCTTACTATAATTCACCTTTTTTTAACAAAAAAGATTTGTATTTTAATGAAATTTCTAAAATAAAAACAACTTTTTAAACTATTTTTAAAATCTTGTGGAAGTAGTATTTATAAGCGTAATTTTTTTTTTTTTTTTTTGGTAAAGAAATTGTGATAAAACAACCACAATTTTCAACATTGGTAAATGAATGAAGTTCAAAATATATCCTCTTACTATGAAAAGGGCCTAAAAAATGAACAAAAAAATGAAATGTTAGATTAGCTTTCAAGTCAATACAACTAGAAAGAATGTACATATCAAATGCTCAAACCCCAAGGTTAAAAAATATATATATGTATGTATATATATATATATATAAAAGAAGAAAAAAAAAAAAAAAAAAAAAAACTTCTATTTCCTTCGCTAGAAGGAAGCCCTACAAAAGAATAGGTTAATAGAATCCTACATGGGTCTGAATTTTTACGTTGGGTGAAACTTCAAAATATCACACTATATCCCTTCTTTTCAGCTTCTCCCTTTTTACCTTTTCTTACCTCTCCTTTTTTACCTCTTTCCTTCAGTTTCTACCTTTTGATTAATGGCGAGCTGTTGGACTTCTTAAAGCACTTAAATTCTCAAGCTTCTCTAAGTAAGACAATTTTTTTGGTGTTACAACATCAGCAGCTTTGCTCATAAGGGTCACGTCTTCTTTACAGCAACTCTCCTTAGTGGACAATGATTCTGTATTAAGTTTATCATTGTCATCGTCCCAACCCATGAAATCTGAGAGTGTCTTTGAAGGTGGGGAGCCATTGGGACTCAGCTGCTTCTCTGTATCCACAGAAACGTTCTCAAACGACTGCTTGGTCAACAATTCTCGAGCAACAGTGTCTGCATAAAGTACATCCTCAATCCTGGACATGATATTAAAAGCCAAGCTTTCTATCACCCTTGAATAGCTTTCTAGGATTGCTTGTCCTACATCCTGTGAACAATCACCAAAGATGAAGATCAATGGATTGCTGATGTTTCAACATTTTAGCAAAAGCAAGGCTAAAGTACGAAAATATCTCCTAACTTTGCCCTTTTTAGAAACGATAATCCTCTTCTATGAACATTTGAAACTATCCTTGAAATAGAAATTAGATAGGATATTGGACAAAGATTAGGACCTGGAACCCGAACTCCGGCACATTGTCCCAGGGTAAAGTTTCTACTTCACAAGTAGTTTTGAAAGAAAGGGCAAAGTTCAAGGGCTTTTTAGCCGAGACAGTTATCGAAGCGTTGATTTTTACCTTGTTATGTTGGATTTTGGATACATCAAGAGCAGATTGAGAAATCCCTGGAAATCTTTGTTTAATTAAGAACAAGATGCTTTCAACTCTCTCTTCAAAAATCTCTCTTTTCTCAAAGCTCACTGCTGAACCCCATGTGGACTTTCCATCCTTTTGATGCATCTTCCTCGTCCATATCACAATTGAGGCCTCAATCCTGTTCTTAAGATCAATCACTTTGTATTCTGTTGACAAGTCCATTGATTTTAGGAATTCCTCTGGATTAAAATAATCATCTGTTATGCTCCTGTAGATTGCATCTCCCAAGCTTGTTTTTCCATTCTACAAAAGACACTCACAATTCAAGGTCAGCTTCAAATTTCATATAACCAATCATCCTAAGCTAAGAAGCACGGATACGGACACGAGACACAGATACGACACGACCCAAACACAGTGAAATGTCATTTCTTGAAAATCTAGGTCACGAACACGACATTTACTATATCATTCCTAAAAACATGATAAATTTATATGCTAACACATGAGTTTGATTTATGCTTGCTAAATTAGTGTCCGATATATGCCTAACAAGTATCTTATACATATTAGATCACAAGTTCTTAGATCACAAGTTTTTTCTCTTACCTTTGGGAGAGACTCAATGTAGCTTTCTGGAACTTCCATTTCTGTCAAGACCTGAGCATTTATGGCCATGGCTGCTTTTAGAATTTGGTTCACAGATTCCTTCTGAAACAGCAGCCATTTTCGAGTAACTTCGGATAGCCCATTCGGAGGCACCTTAACTGCTGGTAGCCACCATTTGTCTCCATCCCTCTGTGTATAATCTGTAATAGATTCATCATCTCTTGATACATACCAAAATTCATCTAGTTTACCAAATTGATCCAGGTAACCCTGCCAATGATATTCAAGTGAGAACTGGA

mRNA sequence

ATGGCGTCCTTAAGGGCAGTCTCTCGGCTATCATCTCGCCTGCAATCTCTCGCTCCAAAGCTCAACAAAAGGTCTCCATCTTCTGAGCTCTCTCCATTCAAATCGGCTTGTCAATCTCAGCCCTCTGCAGCTTCTACATCGCGTGTTTCTTGCACTTCGCGGTTACCATTGGAGTTGAGTAGTCAGGGGTCACTGATGCCATTGCACAGCGCTATAGCTGCAGCTAGATTGATTTCGAGTCTGAGCATTGAATCTCAAGGATGGGGGCTGGTTCCTCAGGGTAACCCTGCCAATGATATTCAAGTGAGAACTGGA

Coding sequence (CDS)

ATGGCGTCCTTAAGGGCAGTCTCTCGGCTATCATCTCGCCTGCAATCTCTCGCTCCAAAGCTCAACAAAAGGTCTCCATCTTCTGAGCTCTCTCCATTCAAATCGGCTTGTCAATCTCAGCCCTCTGCAGCTTCTACATCGCGTGTTTCTTGCACTTCGCGGTTACCATTGGAGTTGAGTAGTCAGGGGTCACTGATGCCATTGCACAGCGCTATAGCTGCAGCTAGATTGATTTCGAGTCTGAGCATTGAATCTCAAGGATGGGGGCTGGTTCCTCAGGGTAACCCTGCCAATGATATTCAAGTGAGAACTGGA

Protein sequence

MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSACQSQPSAASTSRVSCTSRLPLELSSQGSLMPLHSAIAAARLISSLSIESQGWGLVPQGNPANDIQVRTG
Homology
[Close]
BLAST of Carg10860 vs. NCBI nr
Match: XP_022946234.1 (uncharacterized protein LOC111450380 [Cucurbita moschata] >XP_022946235.1 uncharacterized protein LOC111450380 [Cucurbita moschata] >XP_022946236.1 uncharacterized protein LOC111450380 [Cucurbita moschata])

HSP 1 Score: 167.9 bits (424), Expect = 1.8e-38
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1  MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSACQSQPSAASTSRVSCTSRLPLELS 60
          MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSACQSQPSAASTSRVSCTSRLPLELS
Sbjct: 1  MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSACQSQPSAASTSRVSCTSRLPLELS 60

Query: 61 SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQG 95
          SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQG
Sbjct: 61 SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQG 94

[Close]
BLAST of Carg10860 vs. NCBI nr
Match: XP_023547330.1 (uncharacterized protein LOC111806185 [Cucurbita pepo subsp. pepo] >XP_023547331.1 uncharacterized protein LOC111806185 [Cucurbita pepo subsp. pepo] >XP_023547332.1 uncharacterized protein LOC111806185 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 166.8 bits (421), Expect = 4.0e-38
Identity = 93/94 (98.94%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1  MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSACQSQPSAASTSRVSCTSRLPLELS 60
          MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKS+CQSQPSAASTSRVSCTSRLPLELS
Sbjct: 1  MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSSCQSQPSAASTSRVSCTSRLPLELS 60

Query: 61 SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQG 95
          SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQG
Sbjct: 61 SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQG 94

[Close]
BLAST of Carg10860 vs. NCBI nr
Match: XP_022999549.1 (uncharacterized protein LOC111493876 [Cucurbita maxima] >XP_022999550.1 uncharacterized protein LOC111493876 [Cucurbita maxima] >XP_022999551.1 uncharacterized protein LOC111493876 [Cucurbita maxima])

HSP 1 Score: 164.5 bits (415), Expect = 2.0e-37
Identity = 92/94 (97.87%), Postives = 93/94 (98.94%), Query Frame = 0 

Query: 1  MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSACQSQPSAASTSRVSCTSRLPLELS 60
          MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKS+CQSQPSAAS SRVSCTSRLPLELS
Sbjct: 1  MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSSCQSQPSAASISRVSCTSRLPLELS 60

Query: 61 SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQG 95
          SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQG
Sbjct: 61 SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQG 94

[Close]
BLAST of Carg10860 vs. NCBI nr
Match: XP_004139345.1 (PREDICTED: uncharacterized protein LOC101209110 isoform X2 [Cucumis sativus] >KGN60611.1 hypothetical protein Csa_2G004120 [Cucumis sativus])

HSP 1 Score: 149.8 bits (377), Expect = 5.1e-33
Identity = 84/94 (89.36%), Postives = 88/94 (93.62%), Query Frame = 0 

Query: 1  MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSACQSQPSAASTSRVSCTSRLPLELS 60
          MASL+AVSRLSSRLQSLAPK NKRS SSEL  FKS CQSQPSAASTSR+ CTSRLP+ELS
Sbjct: 1  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 61 SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQG 95
          SQGSLMPLHSAIAAARLISSL+IESQGWGLVPQG
Sbjct: 61 SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG 94

[Close]
BLAST of Carg10860 vs. NCBI nr
Match: XP_022157551.1 (uncharacterized protein LOC111024217 [Momordica charantia])

HSP 1 Score: 148.3 bits (373), Expect = 1.5e-32
Identity = 82/94 (87.23%), Postives = 89/94 (94.68%), Query Frame = 0 

Query: 1  MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSACQSQPSAASTSRVSCTSRLPLELS 60
          MASL+AVSRLSSRL SLAPKL K+ PSSE SP KS+CQS+PSAASTSR+SCTSRLPLELS
Sbjct: 1  MASLKAVSRLSSRLHSLAPKLKKKFPSSEPSPLKSSCQSKPSAASTSRISCTSRLPLELS 60

Query: 61 SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQG 95
          SQGSLMPLHSAIAAARLISSL+IES+GWGLVPQG
Sbjct: 61 SQGSLMPLHSAIAAARLISSLTIESRGWGLVPQG 94

[Close]
BLAST of Carg10860 vs. TAIR10
Match: AT1G55205.2 (unknown protein)

HSP 1 Score: 80.5 bits (197), Expect = 6.9e-16
Identity = 56/96 (58.33%), Postives = 71/96 (73.96%), Query Frame = 0 

Query: 1  MASLRAVSRLSSRLQSLAPKLNKRSP--SSELSPFKSACQSQPSAASTSRVSCTSRLPLE 60
          MAS   + RLSS++ SL  KL+K +   SS  SP KS   S PS+A TSR++ + RLP+E
Sbjct: 1  MASSSKICRLSSKIHSLTQKLSKTNVHISSLPSPIKS---SSPSSA-TSRINQSFRLPVE 60

Query: 61 LSSQGSLMPLHSAIAAARLISSLSIESQGWGLVPQG 95
          LS   S++PLHSAIA+ARLISSLS+ES+ WGLVPQG
Sbjct: 61 LSCCLSMLPLHSAIASARLISSLSVESKSWGLVPQG 92

[Close]
BLAST of Carg10860 vs. TAIR10
Match: AT3G13674.1 (unknown protein)

HSP 1 Score: 78.6 bits (192), Expect = 2.6e-15
Identity = 53/96 (55.21%), Postives = 72/96 (75.00%), Query Frame = 0 

Query: 1  MASLRAVSRLSSRLQSLAPKLNKRSP--SSELSPFKSACQSQPSAASTSRVSCTSRLPLE 60
          MAS R + R SSRL+SL   L+ ++   SS  SP KSA    PS+A++ R++ +SRLP+E
Sbjct: 1  MASSRVLGRFSSRLKSLCQNLSNKNANVSSLPSPIKSA---SPSSATSCRLNRSSRLPVE 60

Query: 61 LSSQGSLMPLHSAIAAARLISSLSIESQGWGLVPQG 95
          LS   S++PLHSAIA++RL+SSLS+ES+ WGLVPQG
Sbjct: 61 LS---SMIPLHSAIASSRLVSSLSVESKIWGLVPQG 90

[Close]
BLAST of Carg10860 vs. TAIR10
Match: AT4G39300.1 (unknown protein)

HSP 1 Score: 44.7 bits (104), Expect = 4.2e-05
Identity = 37/94 (39.36%), Postives = 54/94 (57.45%), Query Frame = 0 

Query: 2  ASLRAVSR-LSSRLQSLAPKLNKRSPSSELSPFKSACQSQPSAASTSRVSCTSRLPLELS 61
          ++L A SR L SR +++  K     P++  SPF S  QS P A         SR+   L 
Sbjct: 7  SALMAGSRNLVSRSRTVTQKSLNLKPTTTSSPFASMSQSIPRA---------SRVLSALG 66

Query: 62 SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQG 95
          S  +++PLHSA+A+ARL SS++ +S  W L+ QG
Sbjct: 67 SVETMIPLHSAVASARLRSSIAADSSCWSLLSQG 91

[Close]
BLAST of Carg10860 vs. TrEMBL
Match: tr|A0A0A0LKT5|A0A0A0LKT5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004120 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.4e-33
Identity = 84/94 (89.36%), Postives = 88/94 (93.62%), Query Frame = 0 

Query: 1  MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSACQSQPSAASTSRVSCTSRLPLELS 60
          MASL+AVSRLSSRLQSLAPK NKRS SSEL  FKS CQSQPSAASTSR+ CTSRLP+ELS
Sbjct: 1  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 61 SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQG 95
          SQGSLMPLHSAIAAARLISSL+IESQGWGLVPQG
Sbjct: 61 SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG 94

[Close]
BLAST of Carg10860 vs. TrEMBL
Match: tr|A0A1S3C7U8|A0A1S3C7U8_CUCME (uncharacterized protein LOC103497847 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497847 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 6.3e-32
Identity = 82/94 (87.23%), Postives = 87/94 (92.55%), Query Frame = 0 

Query: 1  MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSACQSQPSAASTSRVSCTSRLPLELS 60
          MASL+AVSRLSSRLQSL+PK NKRS SSEL   KS CQSQPSAASTSR+ CTSRLP+ELS
Sbjct: 1  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 61 SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQG 95
          SQGSLMPLHSAIAAARLISSL+IESQGWGLVPQG
Sbjct: 61 SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG 94

[Close]
BLAST of Carg10860 vs. TrEMBL
Match: tr|A0A1S3C7Z3|A0A1S3C7Z3_CUCME (uncharacterized protein LOC103497847 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497847 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.1e-31
Identity = 81/93 (87.10%), Postives = 86/93 (92.47%), Query Frame = 0 

Query: 1  MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSACQSQPSAASTSRVSCTSRLPLELS 60
          MASL+AVSRLSSRLQSL+PK NKRS SSEL   KS CQSQPSAASTSR+ CTSRLP+ELS
Sbjct: 1  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 61 SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQ 94
          SQGSLMPLHSAIAAARLISSL+IESQGWGLVPQ
Sbjct: 61 SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ 93

[Close]
BLAST of Carg10860 vs. TrEMBL
Match: tr|M5VRS8|M5VRS8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G233600 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.0e-18
Identity = 63/94 (67.02%), Postives = 71/94 (75.53%), Query Frame = 0 

Query: 1  MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSACQSQPSAASTSRVSCTSRLPLELS 60
          MAS + VSRLSSRLQ     LNK S +SELS  KS+  SQ SA +  R+S  SRLP EL 
Sbjct: 1  MASYKVVSRLSSRLQPFTCNLNKTSLASELSQLKSSLHSQTSAPA-RRISRLSRLPSELG 60

Query: 61 SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQG 95
          S GS+MPLHSA+A+ARLISSLSIESQ WGLVPQG
Sbjct: 61 SVGSMMPLHSAVASARLISSLSIESQSWGLVPQG 93

[Close]
BLAST of Carg10860 vs. TrEMBL
Match: tr|W9SBX8|W9SBX8_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_009267 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.3e-16
Identity = 62/94 (65.96%), Postives = 70/94 (74.47%), Query Frame = 0 

Query: 1  MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSACQSQPSAASTSRVSCTSRLPLELS 60
          MAS R +SRLSSRL+  A   NKRS +SE S  KSA  S+ S   T R   TSRLPL+LS
Sbjct: 1  MASSRVLSRLSSRLKPFACNSNKRSLASEFSSLKSASFSEASLL-TGRFRRTSRLPLQLS 60

Query: 61 SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQG 95
          S  S+MPLHSA+A+ARLISSLSIESQ WGLVPQG
Sbjct: 61 SVESMMPLHSAVASARLISSLSIESQHWGLVPQG 93

The following BLAST results are available for this feature:
BLAST of Carg10860 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022946234.11.8e-38100.00uncharacterized protein LOC111450380 [Cucurbita moschata] >XP_022946235.1 unchar... [more]
XP_023547330.14.0e-3898.94uncharacterized protein LOC111806185 [Cucurbita pepo subsp. pepo] >XP_023547331.... [more]
XP_022999549.12.0e-3797.87uncharacterized protein LOC111493876 [Cucurbita maxima] >XP_022999550.1 uncharac... [more]
XP_004139345.15.1e-3389.36PREDICTED: uncharacterized protein LOC101209110 isoform X2 [Cucumis sativus] >KG... [more]
XP_022157551.11.5e-3287.23uncharacterized protein LOC111024217 [Momordica charantia][more]
BLAST of Carg10860 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G55205.26.9e-1658.33unknown protein[more]
AT3G13674.12.6e-1555.21unknown protein[more]
AT4G39300.14.2e-0539.36unknown protein[more]
BLAST of Carg10860 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg10860 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LKT5|A0A0A0LKT5_CUCSA3.4e-3389.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004120 PE=4 SV=1[more]
tr|A0A1S3C7U8|A0A1S3C7U8_CUCME6.3e-3287.23uncharacterized protein LOC103497847 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S3C7Z3|A0A1S3C7Z3_CUCME3.1e-3187.10uncharacterized protein LOC103497847 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|M5VRS8|M5VRS8_PRUPE4.0e-1867.02Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G233600 PE=4 SV=1[more]
tr|W9SBX8|W9SBX8_9ROSA1.3e-1665.96Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_009267 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg10860-RACarg10860-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..49
NoneNo IPR availablePANTHERPTHR33156:SF1SUBFAMILY NOT NAMEDcoord: 1..95
NoneNo IPR availablePANTHERPTHR33156FAMILY NOT NAMEDcoord: 1..95

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg10860Cla016772Watermelon (97103) v1carwmB0569
Carg10860Csa2G004120Cucumber (Chinese Long) v2carcuB0598
Carg10860MELO3C004564Melon (DHL92) v3.5.1carmeB0577
Carg10860ClCG11G002390Watermelon (Charleston Gray)carwcgB0553
Carg10860CSPI02G01100Wild cucumber (PI 183967)carcpiB0603
Carg10860Cucsa.116410Cucumber (Gy14) v1carcgyB0644
Carg10860CmoCh12G012870Cucurbita moschata (Rifu)carcmoB0776
Carg10860CmoCh05G013510Cucurbita moschata (Rifu)carcmoB0779
Carg10860Lsi11G002550Bottle gourd (USVL1VR-Ls)carlsiB514
Carg10860Cp4.1LG11g11160Cucurbita pepo (Zucchini)carcpeB0809
Carg10860Cp4.1LG07g10170Cucurbita pepo (Zucchini)carcpeB0817
Carg10860CsGy2G001090Cucumber (Gy14) v2carcgybB0573
Carg10860MELO3C004564.2Melon (DHL92) v3.6.1carmedB0584
Carg10860CsaV3_2G002190Cucumber (Chinese Long) v3carcucB0605
Carg10860Cla97C11G208810Watermelon (97103) v2carwmbB0591
Carg10860Bhi06G001717Wax gourdcarwgoB0677
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg10860Carg18580Silver-seed gourdcarcarB528
The following block(s) are covering this gene:
GeneOrganismBlock
Carg10860Silver-seed gourdcarcarB044
Carg10860Silver-seed gourdcarcarB140
Carg10860Silver-seed gourdcarcarB152
Carg10860Silver-seed gourdcarcarB233
Carg10860Cucumber (Gy14) v2carcgybB0571
Carg10860Cucurbita maxima (Rimu)carcmaB0793
Carg10860Cucurbita maxima (Rimu)carcmaB0795
Carg10860Cucurbita maxima (Rimu)carcmaB0797
Carg10860Cucurbita maxima (Rimu)carcmaB0798
Carg10860Cucurbita maxima (Rimu)carcmaB0800
Carg10860Cucurbita maxima (Rimu)carcmaB0802
Carg10860Cucurbita moschata (Rifu)carcmoB0772
Carg10860Cucurbita moschata (Rifu)carcmoB0774
Carg10860Cucurbita moschata (Rifu)carcmoB0778
Carg10860Cucurbita pepo (Zucchini)carcpeB0812
Carg10860Cucurbita pepo (Zucchini)carcpeB0813
Carg10860Cucurbita pepo (Zucchini)carcpeB0814
Carg10860Wild cucumber (PI 183967)carcpiB0601
Carg10860Cucumber (Chinese Long) v2carcuB0596
Carg10860Cucumber (Chinese Long) v3carcucB0603
Carg10860Bottle gourd (USVL1VR-Ls)carlsiB518
Carg10860Bottle gourd (USVL1VR-Ls)carlsiB520
Carg10860Melon (DHL92) v3.5.1carmeB0572
Carg10860Melon (DHL92) v3.5.1carmeB0574
Carg10860Melon (DHL92) v3.6.1carmedB0581
Carg10860Watermelon (Charleston Gray)carwcgB0558
Carg10860Watermelon (Charleston Gray)carwcgB0559
Carg10860Watermelon (97103) v1carwmB0566
Carg10860Watermelon (97103) v1carwmB0571
Carg10860Watermelon (97103) v2carwmbB0596
Carg10860Watermelon (97103) v2carwmbB0597
Carg10860Wax gourdcarwgoB0681
Carg10860Wax gourdcarwgoB0685