CU086547 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU086547
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 705113 .. 705456 (+)
Sequence length261
The following sequences are available for this feature:

transcribed_cluster sequence

TAGTTGGTCCTATTTACGGTCCGGGGGCCTCAAAAGCTTCACTTCTAGAACGAAGAAATCTCCAATGGCGTCCTTAAAAGCGGTTTCTCGGTTATCATCCCGCTTGCAATCACTCGCTCCAAAGTTCAACAAAAGGTCTTCATCTTCTGAGCTATTTTCATTCAAATCTACTTGTCAATCTCAGCCTTCCGCAGCTTCTACATCGCGTCTTCATTGTACTTCGCGGTTACCAGTGGAGTTGAGTAGTCGGGGGTCATTGAT
BLAST of CU086547 vs. TrEMBL
Match: A0A0A0LKT5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G004120 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.8e-18
Identity = 53/65 (81.54%), Postives = 54/65 (83.08%), Query Frame = 2

Query: 65  MASLKAVSRLSSRLQSLAPKFNKRXXXXXXXXXXXTCQSQPSAASTSRLHCTSRLPVELS 124
           MASLKAVSRLSSRLQSLAPKFNKR           TCQSQPSAASTSRLHCTSRLPVELS
Sbjct: 1   MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 125 SRGSL 184
           S+GSL
Sbjct: 61  SQGSL 65

Query: 185 244
           
Sbjct: 121 65

Query: 245 260
           
Sbjct: 181 65

BLAST of CU086547 vs. NCBI nr
Match: gi|778665907|ref|XP_011648655.1| (PREDICTED: uncharacterized protein LOC101209110 isoform X1 [Cucumis sativus])

HSP 1 Score: 95.9 bits (237), Expect = 3.7e-17
Identity = 53/65 (81.54%), Postives = 54/65 (83.08%), Query Frame = 2

Query: 65  MASLKAVSRLSSRLQSLAPKFNKRXXXXXXXXXXXTCQSQPSAASTSRLHCTSRLPVELS 124
           MASLKAVSRLSSRLQSLAPKFNKR           TCQSQPSAASTSRLHCTSRLPVELS
Sbjct: 1   MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 125 SRGSL 184
           S+GSL
Sbjct: 61  SQGSL 65

Query: 185 244
           
Sbjct: 121 65

Query: 245 260
           
Sbjct: 181 65

BLAST of CU086547 vs. NCBI nr
Match: gi|449443153|ref|XP_004139345.1| (PREDICTED: uncharacterized protein LOC101209110 isoform X2 [Cucumis sativus])

HSP 1 Score: 95.9 bits (237), Expect = 3.7e-17
Identity = 53/65 (81.54%), Postives = 54/65 (83.08%), Query Frame = 2

Query: 65  MASLKAVSRLSSRLQSLAPKFNKRXXXXXXXXXXXTCQSQPSAASTSRLHCTSRLPVELS 124
           MASLKAVSRLSSRLQSLAPKFNKR           TCQSQPSAASTSRLHCTSRLPVELS
Sbjct: 1   MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 125 SRGSL 184
           S+GSL
Sbjct: 61  SQGSL 65

Query: 185 244
           
Sbjct: 121 65

Query: 245 260
           
Sbjct: 181 65

BLAST of CU086547 vs. NCBI nr
Match: gi|659071160|ref|XP_008458440.1| (PREDICTED: uncharacterized protein LOC103497847 isoform X1 [Cucumis melo])

HSP 1 Score: 94.7 bits (234), Expect = 8.2e-17
Identity = 52/65 (80.00%), Postives = 54/65 (83.08%), Query Frame = 2

Query: 65  MASLKAVSRLSSRLQSLAPKFNKRXXXXXXXXXXXTCQSQPSAASTSRLHCTSRLPVELS 124
           MASLKAVSRLSSRLQSL+PKFNKR           TCQSQPSAASTSRLHCTSRLPVELS
Sbjct: 1   MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 125 SRGSL 184
           S+GSL
Sbjct: 61  SQGSL 65

Query: 185 244
           
Sbjct: 121 65

Query: 245 260
           
Sbjct: 181 65

BLAST of CU086547 vs. NCBI nr
Match: gi|659071162|ref|XP_008458447.1| (PREDICTED: uncharacterized protein LOC103497847 isoform X2 [Cucumis melo])

HSP 1 Score: 94.7 bits (234), Expect = 8.2e-17
Identity = 52/65 (80.00%), Postives = 54/65 (83.08%), Query Frame = 2

Query: 65  MASLKAVSRLSSRLQSLAPKFNKRXXXXXXXXXXXTCQSQPSAASTSRLHCTSRLPVELS 124
           MASLKAVSRLSSRLQSL+PKFNKR           TCQSQPSAASTSRLHCTSRLPVELS
Sbjct: 1   MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 125 SRGSL 184
           S+GSL
Sbjct: 61  SQGSL 65

Query: 185 244
           
Sbjct: 121 65

Query: 245 260
           
Sbjct: 181 65

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LKT5_CUCSA1.8e-1881.54Uncharacterized protein OS=Cucumis sativus GN=Csa_2G004120 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778665907|ref|XP_011648655.1|3.7e-1781.54PREDICTED: uncharacterized protein LOC101209110 isoform X1 [Cucumis sativus][more]
gi|449443153|ref|XP_004139345.1|3.7e-1781.54PREDICTED: uncharacterized protein LOC101209110 isoform X2 [Cucumis sativus][more]
gi|659071160|ref|XP_008458440.1|8.2e-1780.00PREDICTED: uncharacterized protein LOC103497847 isoform X1 [Cucumis melo][more]
gi|659071162|ref|XP_008458447.1|8.2e-1780.00PREDICTED: uncharacterized protein LOC103497847 isoform X2 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa2G004120Csa2G004120gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02LBQ77FKNP3UI02LBQ77EST
H0171937H0171937EST