Csa1G674040 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G674040
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionATP-dependent zinc metalloprotease FtsH; contains IPR025662 (Sigma-54 interaction domain, ATP-binding site 1), IPR027417 (P-loop containing nucleoside triphosphate hydrolase)
LocationChr1 : 27201696 .. 27203618 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTACTTTTGTAATTTCATTAGCTTCGTTGAAACGTTCTCTTGTTTAAACAAACATGAGATTGCAAGTCTCTTAATATAAGAATTTCAGATAGAGGCGTCAACAAAGAATAGACTGAGCCGTCTCTTGTTCTGATTTATCAATCAGATCTCTTTCTATCCTTGGATACCACATGTTCAGTTGCAGTGTTTTCTAAAACAATTCTTATATCTCCTCATGGTTTGAGCATCTTATTGCAGGGGGTCTTAATTGTTGGTGAGAGCGGAACAGGAAAGACATCTCTTGCACTGGCCATAGCTGCAGAAGCAAAAGTACCAGTTGTTACAGTTAAAGCCCAAGAATTAGAGCCTGGACTATGGGTTGGGCAGAGTGCATCCAATGTCCGGGAATTATTCCAAACTGCAAGAGATTTGGTTGTTCTTTTGAATCTTTACTGTTGAAATATGCATTTCTTGACTTACTCATATTGGTAGATATATTATAATATTTATTCGTTTGATAATTTACAATTTCATTAGTAAATGAATGTCCAGTAGGTAAGAATAACTCCAAGCCTAGAGTGTTGTAGAAGCTCTCCAATTGGCAATAGTAAAAGAAATATAAAGCTATTATAAAATAAATGACATCAGGAGGAACCTTTAAAAAAAAAAAATCCCCCAGCATTCTCATCATATCATTCTCAAGGCTATAAAATAATGTTCTATATCCTAGCAATCAAAATTTCCTGAAGGATTGTGCGAGCGACCACCACCAAAAAGGCTATAGCCTTGCCCTAGAACTTTCTATAAAATACCAGGAAGATATATGAGAAGGATGCACAATTCCGAAGAAAATTAAAAAGGCTCTCTTATTGGTCCGGAAAATTGAAAAAAACTAGTAATTTAAAAATTCTCCTCGAGTGCATTTTGTTCACATTGGGACAAAGTTTCCCTGTTGTTATACCTTAATTTTGATCTTTTCGCTTGAGCACACACCTTGACCCTCCTCTCTCCTCTCTCATCTCACGTCTCTCCTCCACCCTCCTCCCTGGTTAGCCAGCCTCTCCGACGAGCTCCCTTTCTTTATTTTTCTGTTTTCAGCTCTCTGTATTAGGCTGGACTATGTCTCTATTGTATTTTGGCAGTTTCTACTTCTAGTTTTAATTGGGATATGATGTTTTGGTGCTAAAGGGGTGTCAACCTAGTTGAGATGTCTGGTGCACATTCTAATCCCCATGCTTTTCATTTCCAAGGCTTTTTTATTATGCTCATTATATAGCTCTCTTGAGATTTTTAATTATTAATATAGAAGTTTGTTTCCATTTTTCCATTTTGTTTTTTTTATCTTTTAGGAATGTTAGGCAGCCTCCATATCTTTTAGTGCAGTTATTCTTTAGATAGAGAGGAATGCTAAAGTCTGTTGTGCTAATGCTACTAGAGCCATCGATGCTGTAAGTTTGGCTTGAGAAGGATAGAAGGATCTTCAATGGATAGGAGAAGGATTTGACCTTGGGGCTCTTTATGTCAATAGGCGGGTTTTCTGATAACCTTAGGGCCTTTGCTTTGTGCTTTGTAAATTCCTACCGCCATTTTCCTTCCTTTAAATAATCTACCCTATTCTCATTCAAGTTTTAATATACAATTTATGCATTCAATCTTAATTGGTATACAGATTTGGGTTTGTTTCTTTCTGTTTATATTAGTGTGAATGTTTTTTAACCAGCAATATTTTCTTTTCTTTTTATGCTAGAAGCGATTAGATGGTTAATTTTTGCAATCTTCCATGTCTAACTTTTGTCCTAGAGTTATATCTTTAGGCACCTGTGATCATATTTGTGGAGGATTTTGACCTCTTTGCTGGAGTTCGTGGCAAGTTTATTCATACCAAAGAACAGGATCACGAGGCTTTCATTAACCAACTTCTTGTGGAGCTTGATGGGTAA

mRNA sequence

ATGCCTACTTTTGTAATTTCATTAGCTTCGTTGAAACATCTCTTTCTATCCTTGGATACCACATGTTCAGTTGCAGTGTTTTCTAAAACAATTCTTATATCTCCTCATGGTTTGAGCATCTTATTGCAGGGGGTCTTAATTGTTGGTGAGAGCGGAACAGGAAAGACATCTCTTGCACTGGCCATAGCTGCAGAAGCAAAAGTACCAGTTGTTACAGTTAAAGCCCAAGAATTAGAGCCTGGACTATGGGTTGGGCAGAGTGCATCCAATGTCCGGGAATTATTCCAAACTGCAAGAGATTTGGCACCTGTGATCATATTTGTGGAGGATTTTGACCTCTTTGCTGGAGTTCGTGGCAAGTTTATTCATACCAAAGAACAGGATCACGAGGCTTTCATTAACCAACTTCTTGTGGAGCTTGATGGGTAA

Coding sequence (CDS)

ATGCCTACTTTTGTAATTTCATTAGCTTCGTTGAAACATCTCTTTCTATCCTTGGATACCACATGTTCAGTTGCAGTGTTTTCTAAAACAATTCTTATATCTCCTCATGGTTTGAGCATCTTATTGCAGGGGGTCTTAATTGTTGGTGAGAGCGGAACAGGAAAGACATCTCTTGCACTGGCCATAGCTGCAGAAGCAAAAGTACCAGTTGTTACAGTTAAAGCCCAAGAATTAGAGCCTGGACTATGGGTTGGGCAGAGTGCATCCAATGTCCGGGAATTATTCCAAACTGCAAGAGATTTGGCACCTGTGATCATATTTGTGGAGGATTTTGACCTCTTTGCTGGAGTTCGTGGCAAGTTTATTCATACCAAAGAACAGGATCACGAGGCTTTCATTAACCAACTTCTTGTGGAGCTTGATGGGTAA

Protein sequence

MPTFVISLASLKHLFLSLDTTCSVAVFSKTILISPHGLSILLQGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG*
Homology
[Close]
BLAST of Csa1G674040 vs. Swiss-Prot
Match: FTSI5_ARATH (Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=Arabidopsis thaliana GN=FTSHI5 PE=2 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.2e-44
Identity = 90/100 (90.00%), Postives = 95/100 (95.00%), Query Frame = 1 

Query: 43  QGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLA 102
           +GVLIVGE GTGKTSLALAIAAEA+VPVV V+AQELE GLWVGQSA+NVRELFQTARDLA
Sbjct: 818 RGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSAANVRELFQTARDLA 877

Query: 103 PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 143
           PVIIFVEDFDLFAGVRGKF+HTK+QDHE+FINQLLVELDG
Sbjct: 878 PVIIFVEDFDLFAGVRGKFVHTKQQDHESFINQLLVELDG 917

[Close]
BLAST of Csa1G674040 vs. Swiss-Prot
Match: FTSH1_METI4 (ATP-dependent zinc metalloprotease FtsH 1 OS=Methylacidiphilum infernorum (isolate V4) GN=ftsH1 PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 7.9e-17
Identity = 46/100 (46.00%), Postives = 61/100 (61.00%), Query Frame = 1 

Query: 43  QGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLA 102
           +GVL+VG  GTGKT LA A+A EAKVP  ++   E    ++VG  A+ VR+LF  A+  A
Sbjct: 214 KGVLLVGPPGTGKTLLAKAVAGEAKVPFFSISGSEFVE-MFVGVGAARVRDLFGQAKSKA 273

Query: 103 PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 143
           P I+F+++ D     RG  I     +HE  +NQLLVE+DG
Sbjct: 274 PCIVFIDELDAIGRQRGVRIQVGSDEHEQTLNQLLVEMDG 312

[Close]
BLAST of Csa1G674040 vs. Swiss-Prot
Match: FTSH_MARHV (ATP-dependent zinc metalloprotease FtsH OS=Marinobacter hydrocarbonoclasticus (strain ATCC 700491 / DSM 11845 / VT8) GN=ftsH PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.0e-16
Identity = 45/104 (43.27%), Postives = 66/104 (63.46%), Query Frame = 1 

Query: 39  SILLQGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTA 98
           +++ +GVL+VG  GTGKT LA AIA EA+VP  ++ A E    ++VG  A+ VR++FQTA
Sbjct: 216 AVMPKGVLLVGPPGTGKTLLARAIAGEAEVPFFSISASEFIE-MFVGVGAARVRDMFQTA 275

Query: 99  RDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 143
           R  AP +IF+++ D     RG  +     + E  +NQ+L E+DG
Sbjct: 276 RKEAPALIFIDELDAVGRSRGAGLGGGHDEREQTLNQILTEMDG 318

[Close]
BLAST of Csa1G674040 vs. Swiss-Prot
Match: FTSH_ACHLI (ATP-dependent zinc metalloprotease FtsH OS=Acholeplasma laidlawii (strain PG-8A) GN=ftsH PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 6.7e-16
Identity = 45/100 (45.00%), Postives = 63/100 (63.00%), Query Frame = 1 

Query: 43  QGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLA 102
           +GVL+VG+ GTGKT LA A+A EA+VP  ++   +    L+VG  AS VR+LF+ A+  A
Sbjct: 216 KGVLLVGQPGTGKTLLAKAVAGEAQVPFFSISGSDFVE-LYVGVGASRVRDLFKVAKQSA 275

Query: 103 PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 143
           P IIF+++ D     RG  +     + E  +NQLLVE+DG
Sbjct: 276 PCIIFIDEIDAVGRQRGAGMGGGNDEREQTLNQLLVEMDG 314

[Close]
BLAST of Csa1G674040 vs. Swiss-Prot
Match: FTSH_SALTY (ATP-dependent zinc metalloprotease FtsH OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=ftsH PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 8.8e-16
Identity = 45/100 (45.00%), Postives = 62/100 (62.00%), Query Frame = 1 

Query: 43  QGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLA 102
           +GVL+VG  GTGKT LA AIA EAKVP  T+   +    ++VG  AS VR++F+ A+  A
Sbjct: 186 KGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVE-MFVGVGASRVRDMFEQAKKAA 245

Query: 103 PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 143
           P IIF+++ D     RG  +     + E  +NQ+LVE+DG
Sbjct: 246 PCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDG 284

[Close]
BLAST of Csa1G674040 vs. TrEMBL
Match: A0A0A0LY88_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G674040 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 8.7e-71
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 1 

Query: 1   MPTFVISLASLKHLFLSLDTTCSVAVFSKTILISPHGLSILLQGVLIVGESGTGKTSLAL 60
           MPTFVISLASLKHLFLSLDTTCSVAVFSKTILISPHGLSILLQGVLIVGESGTGKTSLAL
Sbjct: 1   MPTFVISLASLKHLFLSLDTTCSVAVFSKTILISPHGLSILLQGVLIVGESGTGKTSLAL 60

Query: 61  AIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGK 120
           AIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGK
Sbjct: 61  AIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGK 120

Query: 121 FIHTKEQDHEAFINQLLVELDG 143
           FIHTKEQDHEAFINQLLVELDG
Sbjct: 121 FIHTKEQDHEAFINQLLVELDG 142

[Close]
BLAST of Csa1G674040 vs. TrEMBL
Match: M0TNS5_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 9.1e-44
Identity = 93/101 (92.08%), Postives = 99/101 (98.02%), Query Frame = 1 

Query: 42  LQGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDL 101
           LQGVLIVGE GTGKTSLALAIAAEA+VPVV V+A++LEPGLWVGQSASNVRELFQTARDL
Sbjct: 3   LQGVLIVGERGTGKTSLALAIAAEARVPVVQVEARQLEPGLWVGQSASNVRELFQTARDL 62

Query: 102 APVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 143
           APVIIFVEDFDLFAGVRG+FIHTK+QDHEAFINQLLVELDG
Sbjct: 63  APVIIFVEDFDLFAGVRGQFIHTKKQDHEAFINQLLVELDG 103

[Close]
BLAST of Csa1G674040 vs. TrEMBL
Match: S8EMQ7_9LAMI (Uncharacterized protein (Fragment) OS=Genlisea aurea GN=M569_00780 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.2e-43
Identity = 94/100 (94.00%), Postives = 97/100 (97.00%), Query Frame = 1 

Query: 43  QGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLA 102
           +GVLIVGE GTGKTSLALAIAAEAKVPVV VKAQ+LE GLWVGQSASNVRELFQTARDLA
Sbjct: 708 RGVLIVGERGTGKTSLALAIAAEAKVPVVEVKAQQLEAGLWVGQSASNVRELFQTARDLA 767

Query: 103 PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 143
           PVIIFVEDFDLFAGVRGKFIHTK+QDHEAFINQLLVELDG
Sbjct: 768 PVIIFVEDFDLFAGVRGKFIHTKKQDHEAFINQLLVELDG 807

[Close]
BLAST of Csa1G674040 vs. TrEMBL
Match: M5WK23_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000333mg PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 4.5e-43
Identity = 92/100 (92.00%), Postives = 96/100 (96.00%), Query Frame = 1 

Query: 43  QGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLA 102
           +GVLIVGE GTGKTSLALAIAA+AKVPVV +KAQELE GLWVGQSASNVRELFQTAR+LA
Sbjct: 774 RGVLIVGERGTGKTSLALAIAAQAKVPVVNIKAQELEAGLWVGQSASNVRELFQTARELA 833

Query: 103 PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 143
           PVIIFVEDFDLFAGVRGKFIHTK QDHEAFINQLLVELDG
Sbjct: 834 PVIIFVEDFDLFAGVRGKFIHTKNQDHEAFINQLLVELDG 873

[Close]
BLAST of Csa1G674040 vs. TrEMBL
Match: D7TUI7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0030g02190 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 4.5e-43
Identity = 93/100 (93.00%), Postives = 96/100 (96.00%), Query Frame = 1 

Query: 43  QGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLA 102
           +GVLIVGE GTGKTSLALAIAAEAKVPVV VKAQ+LE GLWVGQSASNVRELFQ ARDLA
Sbjct: 818 RGVLIVGERGTGKTSLALAIAAEAKVPVVEVKAQQLEAGLWVGQSASNVRELFQAARDLA 877

Query: 103 PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 143
           PVIIFVEDFDLFAGVRGKFIHTK+QDHEAFINQLLVELDG
Sbjct: 878 PVIIFVEDFDLFAGVRGKFIHTKKQDHEAFINQLLVELDG 917

[Close]
BLAST of Csa1G674040 vs. TAIR10
Match: AT3G04340.1 (AT3G04340.1 FtsH extracellular protease family)

HSP 1 Score: 180.6 bits (457), Expect = 6.6e-46
Identity = 90/100 (90.00%), Postives = 95/100 (95.00%), Query Frame = 1 

Query: 43  QGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLA 102
           +GVLIVGE GTGKTSLALAIAAEA+VPVV V+AQELE GLWVGQSA+NVRELFQTARDLA
Sbjct: 818 RGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSAANVRELFQTARDLA 877

Query: 103 PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 143
           PVIIFVEDFDLFAGVRGKF+HTK+QDHE+FINQLLVELDG
Sbjct: 878 PVIIFVEDFDLFAGVRGKFVHTKQQDHESFINQLLVELDG 917

[Close]
BLAST of Csa1G674040 vs. TAIR10
Match: AT3G47060.1 (AT3G47060.1 FTSH protease 7)

HSP 1 Score: 84.7 bits (208), Expect = 5.0e-17
Identity = 49/101 (48.51%), Postives = 62/101 (61.39%), Query Frame = 1 

Query: 43  QGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLA 102
           +GVL+VG  GTGKT LA A+A EA+VP ++  A E    L+VG  AS VR+LF  A+  A
Sbjct: 359 RGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVE-LYVGMGASRVRDLFARAKKEA 418

Query: 103 PVIIFVEDFDLFAGVR-GKFIHTKEQDHEAFINQLLVELDG 143
           P IIF+++ D  A  R GKF      + E  +NQLL E+DG
Sbjct: 419 PSIIFIDEIDAVAKSRDGKFRMGSNDEREQTLNQLLTEMDG 458

[Close]
BLAST of Csa1G674040 vs. TAIR10
Match: AT5G58870.1 (AT5G58870.1 FTSH protease 9)

HSP 1 Score: 83.6 bits (205), Expect = 1.1e-16
Identity = 48/101 (47.52%), Postives = 61/101 (60.40%), Query Frame = 1 

Query: 43  QGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLA 102
           +GVL+VG  GTGKT LA A+A E+ VP ++  A E    L+VG  AS VR+LF  A+  A
Sbjct: 363 RGVLLVGLPGTGKTLLAKAVAGESDVPFISCSASEFVE-LYVGMGASRVRDLFARAKKEA 422

Query: 103 PVIIFVEDFDLFAGVR-GKFIHTKEQDHEAFINQLLVELDG 143
           P IIF+++ D  A  R GKF      + E  +NQLL E+DG
Sbjct: 423 PSIIFIDEIDAVAKSRDGKFRMVSNDEREQTLNQLLTEMDG 462

[Close]
BLAST of Csa1G674040 vs. TAIR10
Match: AT3G02450.1 (AT3G02450.1 cell division protein ftsH, putative)

HSP 1 Score: 82.8 bits (203), Expect = 1.9e-16
Identity = 46/102 (45.10%), Postives = 63/102 (61.76%), Query Frame = 1 

Query: 41  LLQGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARD 100
           L +GVL+VG  GTGKT LA A+A EA VP  +V A E    L+VG+ A+ +R+LF  AR 
Sbjct: 366 LPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVE-LFVGRGAARIRDLFNAARK 425

Query: 101 LAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 143
            +P IIF+++ D   G RG+  +    + +  +NQLL E+DG
Sbjct: 426 NSPSIIFIDELDAVGGKRGRSFN---DERDQTLNQLLTEMDG 463

[Close]
BLAST of Csa1G674040 vs. TAIR10
Match: AT1G06430.1 (AT1G06430.1 FTSH protease 8)

HSP 1 Score: 82.8 bits (203), Expect = 1.9e-16
Identity = 46/100 (46.00%), Postives = 61/100 (61.00%), Query Frame = 1 

Query: 43  QGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLA 102
           +GVL+VG  GTGKT LA AIA EA VP  ++   E    ++VG  AS VR+LF+ A++ A
Sbjct: 254 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVE-MFVGVGASRVRDLFKKAKENA 313

Query: 103 PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 143
           P I+FV++ D     RG  I     + E  +NQLL E+DG
Sbjct: 314 PCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDG 352

[Close]
BLAST of Csa1G674040 vs. NCBI nr
Match: gi|700211652|gb|KGN66748.1| (hypothetical protein Csa_1G674040 [Cucumis sativus])

HSP 1 Score: 274.2 bits (700), Expect = 1.2e-70
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 1 

Query: 1   MPTFVISLASLKHLFLSLDTTCSVAVFSKTILISPHGLSILLQGVLIVGESGTGKTSLAL 60
           MPTFVISLASLKHLFLSLDTTCSVAVFSKTILISPHGLSILLQGVLIVGESGTGKTSLAL
Sbjct: 1   MPTFVISLASLKHLFLSLDTTCSVAVFSKTILISPHGLSILLQGVLIVGESGTGKTSLAL 60

Query: 61  AIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGK 120
           AIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGK
Sbjct: 61  AIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGK 120

Query: 121 FIHTKEQDHEAFINQLLVELDG 143
           FIHTKEQDHEAFINQLLVELDG
Sbjct: 121 FIHTKEQDHEAFINQLLVELDG 142

[Close]
BLAST of Csa1G674040 vs. NCBI nr
Match: gi|449449669|ref|XP_004142587.1| (PREDICTED: uncharacterized protein LOC101207174 [Cucumis sativus])

HSP 1 Score: 194.1 bits (492), Expect = 1.6e-46
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 1 

Query: 43  QGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLA 102
           +GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLA
Sbjct: 825 RGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLA 884

Query: 103 PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 143
           PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
Sbjct: 885 PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 924

[Close]
BLAST of Csa1G674040 vs. NCBI nr
Match: gi|659086122|ref|XP_008443775.1| (PREDICTED: uncharacterized protein LOC103487285 [Cucumis melo])

HSP 1 Score: 190.7 bits (483), Expect = 1.8e-45
Identity = 97/100 (97.00%), Postives = 99/100 (99.00%), Query Frame = 1 

Query: 43  QGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLA 102
           +GVLIVGE GTGKTSLALAIAAEAKVPVVTV+AQELEPGLWVGQSASNVRELFQTARDLA
Sbjct: 820 RGVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTARDLA 879

Query: 103 PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 143
           PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
Sbjct: 880 PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 919

[Close]
BLAST of Csa1G674040 vs. NCBI nr
Match: gi|720038850|ref|XP_010268115.1| (PREDICTED: uncharacterized protein LOC104605177 [Nelumbo nucifera])

HSP 1 Score: 185.7 bits (470), Expect = 5.8e-44
Identity = 95/100 (95.00%), Postives = 97/100 (97.00%), Query Frame = 1 

Query: 43   QGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLA 102
            +GVLIVGE GTGKTSLALAIAAEAKVPVV VKAQ+LE GLWVGQSASNVRELFQTARDLA
Sbjct: 1117 RGVLIVGERGTGKTSLALAIAAEAKVPVVEVKAQQLEAGLWVGQSASNVRELFQTARDLA 1176

Query: 103  PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 143
            PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
Sbjct: 1177 PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 1216

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BLAST of Csa1G674040 vs. NCBI nr
Match: gi|698553526|ref|XP_009769965.1| (PREDICTED: ATP-dependent zinc metalloprotease FTSH 5, chloroplastic-like, partial [Nicotiana sylvestris])

HSP 1 Score: 184.5 bits (467), Expect = 1.3e-43
Identity = 94/100 (94.00%), Postives = 97/100 (97.00%), Query Frame = 1 

Query: 43  QGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQTARDLA 102
           QGVLIVGE GTGKTSLALAIAAEAKVP+V VKAQ+LE GLWVGQSASNVRELFQTARDLA
Sbjct: 1   QGVLIVGERGTGKTSLALAIAAEAKVPLVEVKAQQLEAGLWVGQSASNVRELFQTARDLA 60

Query: 103 PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 143
           PVIIFVEDFDLFAGVRGKFIHTK+QDHEAFINQLLVELDG
Sbjct: 61  PVIIFVEDFDLFAGVRGKFIHTKKQDHEAFINQLLVELDG 100

The following BLAST results are available for this feature:
BLAST of Csa1G674040 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FTSI5_ARATH1.2e-4490.00Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=A... [more]
FTSH1_METI47.9e-1746.00ATP-dependent zinc metalloprotease FtsH 1 OS=Methylacidiphilum infernorum (isola... [more]
FTSH_MARHV3.0e-1643.27ATP-dependent zinc metalloprotease FtsH OS=Marinobacter hydrocarbonoclasticus (s... [more]
FTSH_ACHLI6.7e-1645.00ATP-dependent zinc metalloprotease FtsH OS=Acholeplasma laidlawii (strain PG-8A)... [more]
FTSH_SALTY8.8e-1645.00ATP-dependent zinc metalloprotease FtsH OS=Salmonella typhimurium (strain LT2 / ... [more]
BLAST of Csa1G674040 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LY88_CUCSA8.7e-71100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G674040 PE=4 SV=1[more]
M0TNS5_MUSAM9.1e-4492.08Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1[more]
S8EMQ7_9LAMI1.2e-4394.00Uncharacterized protein (Fragment) OS=Genlisea aurea GN=M569_00780 PE=4 SV=1[more]
M5WK23_PRUPE4.5e-4392.00Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000333mg PE=4 SV=1[more]
D7TUI7_VITVI4.5e-4393.00Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0030g02190 PE=4 SV=... [more]
BLAST of Csa1G674040 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G04340.16.6e-4690.00 FtsH extracellular protease family[more]
AT3G47060.15.0e-1748.51 FTSH protease 7[more]
AT5G58870.11.1e-1647.52 FTSH protease 9[more]
AT3G02450.11.9e-1645.10 cell division protein ftsH, putative[more]
AT1G06430.11.9e-1646.00 FTSH protease 8[more]
BLAST of Csa1G674040 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700211652|gb|KGN66748.1|1.2e-70100.00hypothetical protein Csa_1G674040 [Cucumis sativus][more]
gi|449449669|ref|XP_004142587.1|1.6e-4699.00PREDICTED: uncharacterized protein LOC101207174 [Cucumis sativus][more]
gi|659086122|ref|XP_008443775.1|1.8e-4597.00PREDICTED: uncharacterized protein LOC103487285 [Cucumis melo][more]
gi|720038850|ref|XP_010268115.1|5.8e-4495.00PREDICTED: uncharacterized protein LOC104605177 [Nelumbo nucifera][more]
gi|698553526|ref|XP_009769965.1|1.3e-4394.00PREDICTED: ATP-dependent zinc metalloprotease FTSH 5, chloroplastic-like, partia... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003959ATPase_AAA_core
IPR025662Sigma_54_int_dom_ATP-bd_1
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
biological_process GO:0042981 regulation of apoptotic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008568 microtubule-severing ATPase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU127261cucumber EST collection version 3.0transcribed_cluster
CU135683cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G674040.1Csa1G674040.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU135683CU135683transcribed_cluster
CU127261CU127261transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 41..142
score: 1.
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 45..142
score: 4.0
IPR025662Sigma-54 interaction domain, ATP-binding site 1PROSITEPS00675SIGMA54_INTERACT_1coord: 45..58
scor
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 43..142
score: 1.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 42..142
score: 1.17
NoneNo IPR availablePANTHERPTHR23076METALLOPROTEASE M41 FTSHcoord: 44..142
score: 1.3
NoneNo IPR availablePANTHERPTHR23076:SF58FTSH EXTRACELLULAR PROTEASE FAMILY PROTEINcoord: 44..142
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G674040CSPI01G33120Wild cucumber (PI 183967)cpicuB001
Csa1G674040Cucsa.027420Cucumber (Gy14) v1cgycuB555
Csa1G674040CsGy1G031900Cucumber (Gy14) v2cgybcuB002
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G674040Silver-seed gourdcarcuB0927
Csa1G674040Cucurbita maxima (Rimu)cmacuB064
Csa1G674040Cucurbita maxima (Rimu)cmacuB085
Csa1G674040Cucurbita moschata (Rifu)cmocuB075
Csa1G674040Cucurbita moschata (Rifu)cmocuB054
Csa1G674040Melon (DHL92) v3.5.1cumeB043
Csa1G674040Watermelon (97103) v1cuwmB018
Csa1G674040Cucurbita pepo (Zucchini)cpecuB639
Csa1G674040Cucurbita pepo (Zucchini)cpecuB701
Csa1G674040Bottle gourd (USVL1VR-Ls)culsiB058
Csa1G674040Bottle gourd (USVL1VR-Ls)culsiB081
Csa1G674040Melon (DHL92) v3.6.1cumedB035