CsGy1G031900 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G031900
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionPutative ATP-dependent zinc metalloprotease FtsH-like
LocationChr1 : 30945539 .. 30947663 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGATTGCAAGTCTCTTAATATAAGAATTTCAGATAGAGGCGTCAACAAAGAATAGACTGAGCCGTCTCTTGTTCTGATTTATCAATCAGATCTCTTTCTATCCTTGGATACCACATGTTCAGTTGCAGTGTTTTCTAAAACAATTCTTATATCTCCTCATGGTTTGAGCATCTTATTGCAGGGGGTCTTAATTGTTGGTGAGAGCGGAACAGGAAAGACATCTCTTGCACTGGCCATAGCTGCAGAAGCAAAAGTACCAGTTGTTACAGTTAAAGCCCAAGAATTAGAGCCTGGACTATGGGTTGGGCAGAGTGCATCCAATGTCCGGGAATTATTCCAAACTGCAAGAGATTTGGTTGTTCTTTTGAATCTTTACTGTTGAAATATGCATTTCTTGACTTACTCATATTGGTAGATATATTATAATATTTATTCGTTTGATAATTTACAATTTCATTAGTAAATGAATGTCCAGTAGGTAAGAATAACTCCAAGCCTAGAGTGTTGTAGAAGCTCTCCAATTGGCAATAGTAAAAGAAATATAAAGCTATTATAAAATAAATGACATCAGGAGGAACCTTTAAAAAAAAAAAATCCCCCAGCATTCTCATCATATCATTCTCAAGGCTATAAAATAATGTTCTATATCCTAGCAATCAAAATTTCCTGAAGGATTGTGCGAGCGACCACCACCAAAAAGGCTATAGCCTTGCCCTAGAACTTTCTATAAAATACCAGGAAGATATATGAGAAGGATGCACAATTCCGAAGAAAATTAAAAAGGCTCTCTTATTGGTCCGGAAAATTGAAAAAAACTAGTAATTTAAAAATTCTCCTCGAGTGCATTTTGTTCACATTGGGACAAAGTTTCCCTGTTGTTATACCTTAATTTTGATCTTTTCGCTTGAGCACACACCTTGACCCTCCTCTCTCCTCTCTCATCTCACGTCTCTCCTCCACCCTCCTCCCTGGTTAGCCAGCCTCTCCGACGAGCTCCCTTTCTTTATTTTTCTGTTTTCAGCTCTCTGTATTAGGCTGGACTATGTCTCTATTGTATTTTGGCAGTTTCTACTTCTAGTTTTAATTGGGATATGATGTTTTGGTGCTAAAGGGGTGTCAACCTAGTTGAGATGTCTGGTGCACATTCTAATCCCCATGCTTTTCATTTCCAAGGCTTTTTTATTATGCTCATTATATAGCTCTCTTGAGATTTTTAATTATTAATATAGAAGTTTGTTTCCATTTTTCCATTTTGTTTTTTTTATCTTTTAGGAATGTTAGGCAGCCTCCATATCTTTTAGTGCAGTTATTCTTTAGATAGAGAGGAATGCTAAAGTCTGTTGTGCTAATGCTACTAGAGCCATCGATGCTGTAAGTTTGGCTTGAGAAGGATAGAAGGATCTTCAATGGATAGGAGAAGGATTTGACCTTGGGGCTCTTTATGTCAATAGGCGGGTTTTCTGATAACCTTAGGGCCTTTGCTTTGTGCTTTGTAAATTCCTACCGCCATTTTCCTTCCTTTAAATAATCTACCCTATTCTCATTCAAGTTTTAATATACAATTTATGCATTCAATCTTAATTGGTATACAGATTTGGGTTTGTTTCTTTCTGTTTATATTAGTGTGAATGTTTTTTAACCAGCAATATTTTCTTTTCTTTTTATGCTAGAAGCGATTAGATGGTTAATTTTTGCAATCTTCCATGTCTAACTTTTGTCCTAGAGTTATATCTTTAGGCACCTGTGATCATATTTGTGGAGGATTTTGACCTCTTTGCTGGAGTTCGTGGCAAGTTTATTCATACCAAAGAACAGGATCACGAGGCTTTCATTAACCAACTTCTTGTGGAGCTTGATGGGTAAGCTTAAATTTCCTTTTGTTATTTTGACCATCCAATGTTCTAGTTCTCTTCCTCTGGATGTCTTCAAACATAGTAAAATCTATCCATGAGAAAACTGGCACTTATGTACTACAAGAAATCAGAAGTGTAATATATAGGAGAAATAAAATGTAGCAAAGGCATTTATGAAAATCTATTTGTAAACAGGAAATAAATTGGAACAGCATGTGGGGTTTTCTTTTATCTACAGGAACACTTTAACCTATTCTATGCAGTCGTAA

mRNA sequence

ATGAGATTGCAAGGGGTCTTAATTGTTGGTGAGAGCGGAACAGGAAAGACATCTCTTGCACTGGCCATAGCTGCAGAAGCAAAAGTACCAGTTGTTACAGTTAAAGCCCAAGAATTAGAGCCTGGACTATGGGTTGGGCAGAGTGCATCCAATATAGAGAGGAATGCTAAAGTCTGTTGTGCTAATGCTACTAGAGCCATCGATGCTGCACCTGTGATCATATTTGTGGAGGATTTTGACCTCTTTGCTGGAGTTCGTGGCAAGTTTATTCATACCAAAGAACAGGATCACGAGGCTTTCATTAACCAACTTCTTGTGGAGCTTGATGGGAACACTTTAACCTATTCTATGCAGTCGTAA

Coding sequence (CDS)

ATGAGATTGCAAGGGGTCTTAATTGTTGGTGAGAGCGGAACAGGAAAGACATCTCTTGCACTGGCCATAGCTGCAGAAGCAAAAGTACCAGTTGTTACAGTTAAAGCCCAAGAATTAGAGCCTGGACTATGGGTTGGGCAGAGTGCATCCAATATAGAGAGGAATGCTAAAGTCTGTTGTGCTAATGCTACTAGAGCCATCGATGCTGCACCTGTGATCATATTTGTGGAGGATTTTGACCTCTTTGCTGGAGTTCGTGGCAAGTTTATTCATACCAAAGAACAGGATCACGAGGCTTTCATTAACCAACTTCTTGTGGAGCTTGATGGGAACACTTTAACCTATTCTATGCAGTCGTAA

Protein sequence

MRLQGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNIERNAKVCCANATRAIDAAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDGNTLTYSMQS
Homology
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BLAST of CsGy1G031900 vs. NCBI nr
Match: KGN66748.1 (hypothetical protein Csa_1G674040 [Cucumis sativus])

HSP 1 Score: 170.2 bits (430), Expect = 4.1e-39
Identity = 92/108 (85.19%), Postives = 94/108 (87.04%), Query Frame = 0 

Query: 3   LQGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNIERNAKVCCAN 62
           LQGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASN+    +     
Sbjct: 42  LQGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQT---- 101

Query: 63  ATRAIDAAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 111
              A D APVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
Sbjct: 102 ---ARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 142

[Close]
BLAST of CsGy1G031900 vs. NCBI nr
Match: XP_004142587.1 (PREDICTED: uncharacterized protein LOC101207174 [Cucumis sativus])

HSP 1 Score: 167.5 bits (423), Expect = 2.7e-38
Identity = 90/107 (84.11%), Postives = 93/107 (86.92%), Query Frame = 0 

Query: 4   QGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNIERNAKVCCANA 63
           +GVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASN+    +      
Sbjct: 825 RGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQT----- 884

Query: 64  TRAIDAAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 111
             A D APVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
Sbjct: 885 --ARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 924

[Close]
BLAST of CsGy1G031900 vs. NCBI nr
Match: XP_008443775.1 (PREDICTED: probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic [Cucumis melo])

HSP 1 Score: 164.1 bits (414), Expect = 2.9e-37
Identity = 88/107 (82.24%), Postives = 92/107 (85.98%), Query Frame = 0 

Query: 4   QGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNIERNAKVCCANA 63
           +GVLIVGE GTGKTSLALAIAAEAKVPVVTV+AQELEPGLWVGQSASN+    +      
Sbjct: 820 RGVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQT----- 879

Query: 64  TRAIDAAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 111
             A D APVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
Sbjct: 880 --ARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 919

[Close]
BLAST of CsGy1G031900 vs. NCBI nr
Match: XP_022158670.1 (probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic [Momordica charantia])

HSP 1 Score: 164.1 bits (414), Expect = 2.9e-37
Identity = 88/107 (82.24%), Postives = 92/107 (85.98%), Query Frame = 0 

Query: 4   QGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNIERNAKVCCANA 63
           +GVLIVGE GTGKTSLALAIAAEAKVPVVTV+AQELEPGLWVGQSASN+    +      
Sbjct: 825 RGVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQT----- 884

Query: 64  TRAIDAAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 111
             A D APVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
Sbjct: 885 --ARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 924

[Close]
BLAST of CsGy1G031900 vs. NCBI nr
Match: XP_022960714.1 (probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic isoform X2 [Cucurbita moschata])

HSP 1 Score: 161.4 bits (407), Expect = 1.9e-36
Identity = 85/107 (79.44%), Postives = 92/107 (85.98%), Query Frame = 0 

Query: 4   QGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNIERNAKVCCANA 63
           +GVLIVGE GTGKTSLA+AIAAEAKVPVVTV+AQELEPGLWVGQSASN+    +      
Sbjct: 821 RGVLIVGERGTGKTSLAMAIAAEAKVPVVTVQAQELEPGLWVGQSASNVRELFQT----- 880

Query: 64  TRAIDAAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 111
             A D APVIIFVEDFD+FAGVRGK+IHTKEQDHEAFINQLLVELDG
Sbjct: 881 --ARDLAPVIIFVEDFDIFAGVRGKYIHTKEQDHEAFINQLLVELDG 920

[Close]
BLAST of CsGy1G031900 vs. TAIR10
Match: AT3G04340.1 (FtsH extracellular protease family)

HSP 1 Score: 154.1 bits (388), Expect = 5.5e-38
Identity = 81/107 (75.70%), Postives = 90/107 (84.11%), Query Frame = 0 

Query: 4   QGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNIERNAKVCCANA 63
           +GVLIVGE GTGKTSLALAIAAEA+VPVV V+AQELE GLWVGQSA+N+    +      
Sbjct: 818 RGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSAANVRELFQT----- 877

Query: 64  TRAIDAAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 111
             A D APVIIFVEDFDLFAGVRGKF+HTK+QDHE+FINQLLVELDG
Sbjct: 878 --ARDLAPVIIFVEDFDLFAGVRGKFVHTKQQDHESFINQLLVELDG 917

[Close]
BLAST of CsGy1G031900 vs. TAIR10
Match: AT3G47060.1 (FTSH protease 7)

HSP 1 Score: 68.6 bits (166), Expect = 3.1e-12
Identity = 46/108 (42.59%), Postives = 60/108 (55.56%), Query Frame = 0 

Query: 4   QGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNIERNAKVCCANA 63
           +GVL+VG  GTGKT LA A+A EA+VP ++  A E    L+VG  AS +           
Sbjct: 359 RGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVE-LYVGMGASRVR-------DLF 418

Query: 64  TRAIDAAPVIIFVEDFDLFAGVR-GKFIHTKEQDHEAFINQLLVELDG 111
            RA   AP IIF+++ D  A  R GKF      + E  +NQLL E+DG
Sbjct: 419 ARAKKEAPSIIFIDEIDAVAKSRDGKFRMGSNDEREQTLNQLLTEMDG 458

[Close]
BLAST of CsGy1G031900 vs. TAIR10
Match: AT5G58870.1 (FTSH protease 9)

HSP 1 Score: 67.4 bits (163), Expect = 6.8e-12
Identity = 45/108 (41.67%), Postives = 59/108 (54.63%), Query Frame = 0 

Query: 4   QGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNIERNAKVCCANA 63
           +GVL+VG  GTGKT LA A+A E+ VP ++  A E    L+VG  AS +           
Sbjct: 363 RGVLLVGLPGTGKTLLAKAVAGESDVPFISCSASEFVE-LYVGMGASRVR-------DLF 422

Query: 64  TRAIDAAPVIIFVEDFDLFAGVR-GKFIHTKEQDHEAFINQLLVELDG 111
            RA   AP IIF+++ D  A  R GKF      + E  +NQLL E+DG
Sbjct: 423 ARAKKEAPSIIFIDEIDAVAKSRDGKFRMVSNDEREQTLNQLLTEMDG 462

[Close]
BLAST of CsGy1G031900 vs. TAIR10
Match: AT1G06430.1 (FTSH protease 8)

HSP 1 Score: 66.6 bits (161), Expect = 1.2e-11
Identity = 43/107 (40.19%), Postives = 58/107 (54.21%), Query Frame = 0 

Query: 4   QGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNIERNAKVCCANA 63
           +GVL+VG  GTGKT LA AIA EA VP  ++   E    ++VG  AS +    K      
Sbjct: 254 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVE-MFVGVGASRVRDLFK------ 313

Query: 64  TRAIDAAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 111
            +A + AP I+FV++ D     RG  I     + E  +NQLL E+DG
Sbjct: 314 -KAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDG 352

[Close]
BLAST of CsGy1G031900 vs. TAIR10
Match: AT2G30950.1 (FtsH extracellular protease family)

HSP 1 Score: 66.2 bits (160), Expect = 1.5e-11
Identity = 42/107 (39.25%), Postives = 58/107 (54.21%), Query Frame = 0 

Query: 4   QGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNIERNAKVCCANA 63
           +GVL++G  GTGKT LA AIA EA VP  ++   E    ++VG  AS +    K      
Sbjct: 261 KGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVE-MFVGVGASRVRDLFK------ 320

Query: 64  TRAIDAAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 111
            +A + AP I+FV++ D     RG  I     + E  +NQLL E+DG
Sbjct: 321 -KAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDG 359

[Close]
BLAST of CsGy1G031900 vs. Swiss-Prot
Match: sp|F4J3N2|FTSI5_ARATH (Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FTSHI5 PE=2 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.0e-36
Identity = 81/107 (75.70%), Postives = 90/107 (84.11%), Query Frame = 0 

Query: 4   QGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNIERNAKVCCANA 63
           +GVLIVGE GTGKTSLALAIAAEA+VPVV V+AQELE GLWVGQSA+N+    +      
Sbjct: 818 RGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSAANVRELFQT----- 877

Query: 64  TRAIDAAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 111
             A D APVIIFVEDFDLFAGVRGKF+HTK+QDHE+FINQLLVELDG
Sbjct: 878 --ARDLAPVIIFVEDFDLFAGVRGKFVHTKQQDHESFINQLLVELDG 917

[Close]
BLAST of CsGy1G031900 vs. Swiss-Prot
Match: sp|B3DV46|FTSH1_METI4 (ATP-dependent zinc metalloprotease FtsH 1 OS=Methylacidiphilum infernorum (isolate V4) OX=481448 GN=ftsH1 PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.5e-11
Identity = 42/107 (39.25%), Postives = 59/107 (55.14%), Query Frame = 0 

Query: 4   QGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNIERNAKVCCANA 63
           +GVL+VG  GTGKT LA A+A EAKVP  ++   E    ++VG  A+ +           
Sbjct: 214 KGVLLVGPPGTGKTLLAKAVAGEAKVPFFSISGSEFVE-MFVGVGAARVR-------DLF 273

Query: 64  TRAIDAAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 111
            +A   AP I+F+++ D     RG  I     +HE  +NQLLVE+DG
Sbjct: 274 GQAKSKAPCIVFIDELDAIGRQRGVRIQVGSDEHEQTLNQLLVEMDG 312

[Close]
BLAST of CsGy1G031900 vs. Swiss-Prot
Match: sp|A9NE17|FTSH_ACHLI (ATP-dependent zinc metalloprotease FtsH OS=Acholeplasma laidlawii (strain PG-8A) OX=441768 GN=ftsH PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.5e-11
Identity = 43/107 (40.19%), Postives = 61/107 (57.01%), Query Frame = 0 

Query: 4   QGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNIERNAKVCCANA 63
           +GVL+VG+ GTGKT LA A+A EA+VP  ++   +    L+VG  AS +    KV     
Sbjct: 216 KGVLLVGQPGTGKTLLAKAVAGEAQVPFFSISGSDFVE-LYVGVGASRVRDLFKV----- 275

Query: 64  TRAIDAAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 111
             A  +AP IIF+++ D     RG  +     + E  +NQLLVE+DG
Sbjct: 276 --AKQSAPCIIFIDEIDAVGRQRGAGMGGGNDEREQTLNQLLVEMDG 314

[Close]
BLAST of CsGy1G031900 vs. Swiss-Prot
Match: sp|Q8X9L0|FTSH_ECO57 (ATP-dependent zinc metalloprotease FtsH OS=Escherichia coli O157:H7 OX=83334 GN=ftsH PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.2e-11
Identity = 43/107 (40.19%), Postives = 60/107 (56.07%), Query Frame = 0 

Query: 4   QGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNIERNAKVCCANA 63
           +GVL+VG  GTGKT LA AIA EAKVP  T+   +    ++VG  AS +    +      
Sbjct: 186 KGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVE-MFVGVGASRVRDMFE------ 245

Query: 64  TRAIDAAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 111
            +A  AAP IIF+++ D     RG  +     + E  +NQ+LVE+DG
Sbjct: 246 -QAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDG 284

[Close]
BLAST of CsGy1G031900 vs. Swiss-Prot
Match: sp|P0AAI3|FTSH_ECOLI (ATP-dependent zinc metalloprotease FtsH OS=Escherichia coli (strain K12) OX=83333 GN=ftsH PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.2e-11
Identity = 43/107 (40.19%), Postives = 60/107 (56.07%), Query Frame = 0 

Query: 4   QGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNIERNAKVCCANA 63
           +GVL+VG  GTGKT LA AIA EAKVP  T+   +    ++VG  AS +    +      
Sbjct: 186 KGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVE-MFVGVGASRVRDMFE------ 245

Query: 64  TRAIDAAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 111
            +A  AAP IIF+++ D     RG  +     + E  +NQ+LVE+DG
Sbjct: 246 -QAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDG 284

[Close]
BLAST of CsGy1G031900 vs. TrEMBL
Match: tr|A0A0A0LY88|A0A0A0LY88_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G674040 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.7e-39
Identity = 92/108 (85.19%), Postives = 94/108 (87.04%), Query Frame = 0 

Query: 3   LQGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNIERNAKVCCAN 62
           LQGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASN+    +     
Sbjct: 42  LQGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNVRELFQT---- 101

Query: 63  ATRAIDAAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 111
              A D APVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
Sbjct: 102 ---ARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 142

[Close]
BLAST of CsGy1G031900 vs. TrEMBL
Match: tr|A0A1S3B9K0|A0A1S3B9K0_CUCME (probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487285 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.9e-37
Identity = 88/107 (82.24%), Postives = 92/107 (85.98%), Query Frame = 0 

Query: 4   QGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNIERNAKVCCANA 63
           +GVLIVGE GTGKTSLALAIAAEAKVPVVTV+AQELEPGLWVGQSASN+    +      
Sbjct: 820 RGVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQT----- 879

Query: 64  TRAIDAAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 111
             A D APVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
Sbjct: 880 --ARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 919

[Close]
BLAST of CsGy1G031900 vs. TrEMBL
Match: tr|M0TNS5|M0TNS5_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 3.7e-36
Identity = 85/110 (77.27%), Postives = 93/110 (84.55%), Query Frame = 0 

Query: 1   MRLQGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNIERNAKVCC 60
           M LQGVLIVGE GTGKTSLALAIAAEA+VPVV V+A++LEPGLWVGQSASN+    +   
Sbjct: 1   MELQGVLIVGERGTGKTSLALAIAAEARVPVVQVEARQLEPGLWVGQSASNVRELFQT-- 60

Query: 61  ANATRAIDAAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 111
                A D APVIIFVEDFDLFAGVRG+FIHTK+QDHEAFINQLLVELDG
Sbjct: 61  -----ARDLAPVIIFVEDFDLFAGVRGQFIHTKKQDHEAFINQLLVELDG 103

[Close]
BLAST of CsGy1G031900 vs. TrEMBL
Match: tr|A0A2I4FM89|A0A2I4FM89_9ROSI (probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=Juglans regia OX=51240 GN=LOC109000372 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 4.8e-36
Identity = 84/107 (78.50%), Postives = 90/107 (84.11%), Query Frame = 0 

Query: 4   QGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNIERNAKVCCANA 63
           +GVLIVGE GTGKTSLALA+AAEAKVPVV +KAQ+LEPGLWVGQSASN+    +      
Sbjct: 841 RGVLIVGERGTGKTSLALAVAAEAKVPVVEIKAQQLEPGLWVGQSASNVRELFQT----- 900

Query: 64  TRAIDAAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 111
             A D APVIIFVEDFDLFAGVRGKFIHTK QDHEAFINQLLVELDG
Sbjct: 901 --ARDLAPVIIFVEDFDLFAGVRGKFIHTKNQDHEAFINQLLVELDG 940

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BLAST of CsGy1G031900 vs. TrEMBL
Match: tr|A0A1U8Q926|A0A1U8Q926_NELNU (probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=Nelumbo nucifera OX=4432 GN=LOC104605177 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 6.3e-36
Identity = 86/107 (80.37%), Postives = 90/107 (84.11%), Query Frame = 0 

Query: 4    QGVLIVGESGTGKTSLALAIAAEAKVPVVTVKAQELEPGLWVGQSASNIERNAKVCCANA 63
            +GVLIVGE GTGKTSLALAIAAEAKVPVV VKAQ+LE GLWVGQSASN+    +      
Sbjct: 1103 RGVLIVGERGTGKTSLALAIAAEAKVPVVEVKAQQLEAGLWVGQSASNVRELFQT----- 1162

Query: 64   TRAIDAAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 111
              A D APVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
Sbjct: 1163 --ARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 1202

The following BLAST results are available for this feature:
BLAST of CsGy1G031900 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN66748.14.1e-3985.19hypothetical protein Csa_1G674040 [Cucumis sativus][more]
XP_004142587.12.7e-3884.11PREDICTED: uncharacterized protein LOC101207174 [Cucumis sativus][more]
XP_008443775.12.9e-3782.24PREDICTED: probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chlorop... [more]
XP_022158670.12.9e-3782.24probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic [Mom... [more]
XP_022960714.11.9e-3679.44probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic isof... [more]
BLAST of CsGy1G031900 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G04340.15.5e-3875.70FtsH extracellular protease family[more]
AT3G47060.13.1e-1242.59FTSH protease 7[more]
AT5G58870.16.8e-1241.67FTSH protease 9[more]
AT1G06430.11.2e-1140.19FTSH protease 8[more]
AT2G30950.11.5e-1139.25FtsH extracellular protease family[more]
BLAST of CsGy1G031900 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|F4J3N2|FTSI5_ARATH1.0e-3675.70Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=A... [more]
sp|B3DV46|FTSH1_METI42.5e-1139.25ATP-dependent zinc metalloprotease FtsH 1 OS=Methylacidiphilum infernorum (isola... [more]
sp|A9NE17|FTSH_ACHLI2.5e-1140.19ATP-dependent zinc metalloprotease FtsH OS=Acholeplasma laidlawii (strain PG-8A)... [more]
sp|Q8X9L0|FTSH_ECO574.2e-1140.19ATP-dependent zinc metalloprotease FtsH OS=Escherichia coli O157:H7 OX=83334 GN=... [more]
sp|P0AAI3|FTSH_ECOLI4.2e-1140.19ATP-dependent zinc metalloprotease FtsH OS=Escherichia coli (strain K12) OX=8333... [more]
BLAST of CsGy1G031900 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LY88|A0A0A0LY88_CUCSA2.7e-3985.19Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G674040 PE=4 SV=1[more]
tr|A0A1S3B9K0|A0A1S3B9K0_CUCME1.9e-3782.24probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=C... [more]
tr|M0TNS5|M0TNS5_MUSAM3.7e-3677.27Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 PE=4 SV=1[more]
tr|A0A2I4FM89|A0A2I4FM89_9ROSI4.8e-3678.50probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=J... [more]
tr|A0A1U8Q926|A0A1U8Q926_NELNU6.3e-3680.37probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=N... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR025662Sigma_54_int_dom_ATP-bd_1
IPR003959ATPase_AAA_core
IPR003593AAA+_ATPase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
biological_process GO:0042981 regulation of apoptotic process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0004222 metalloendopeptidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G031900.1CsGy1G031900.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 2..111
e-value: 0.0017
score: 27.6
NoneNo IPR availableGENE3DG3DSA:3.40.50.300coord: 2..119
e-value: 2.8E-21
score: 78.0
NoneNo IPR availablePANTHERPTHR23076METALLOPROTEASE M41 FTSHcoord: 4..110
NoneNo IPR availablePANTHERPTHR23076:SF58INACTIVE ATP-DEPENDENT ZINC METALLOPROTEASE FTSHI 5, CHLOROPLASTIC-RELATEDcoord: 4..110
NoneNo IPR availableCDDcd00009AAAcoord: 5..80
e-value: 2.93034E-7
score: 44.0591
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 6..112
e-value: 2.6E-17
score: 63.4
IPR025662Sigma-54 interaction domain, ATP-binding site 1PROSITEPS00675SIGMA54_INTERACT_1coord: 6..19
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILYSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..113

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G031900Csa1G674040Cucumber (Chinese Long) v2cgybcuB002
CsGy1G031900CSPI01G33120Wild cucumber (PI 183967)cgybcpiB002
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G031900Wax gourdcgybwgoB100
CsGy1G031900Cucurbita maxima (Rimu)cgybcmaB019
CsGy1G031900Cucurbita maxima (Rimu)cgybcmaB027
CsGy1G031900Cucurbita moschata (Rifu)cgybcmoB018
CsGy1G031900Cucurbita moschata (Rifu)cgybcmoB027
CsGy1G031900Cucurbita pepo (Zucchini)cgybcpeB112
CsGy1G031900Cucurbita pepo (Zucchini)cgybcpeB135
CsGy1G031900Bottle gourd (USVL1VR-Ls)cgyblsiB055
CsGy1G031900Melon (DHL92) v3.5.1cgybmeB040
CsGy1G031900Melon (DHL92) v3.6.1cgybmedB034
CsGy1G031900Watermelon (97103) v1cgybwmB021
CsGy1G031900Silver-seed gourdcarcgybB0899
CsGy1G031900Cucumber (Chinese Long) v3cgybcucB001