Csa1G666990 (gene) Cucumber (Chinese Long) v2

NameCsa1G666990
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPentatricopeptide repeat-containing protein; contains IPR002885 (Pentatricopeptide repeat)
LocationChr1 : 27112246 .. 27114582 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGACATAATGTATATTTTAGCCTAACAATTATAACTTTGGTGACTTGGGGGAAAAAGGGAAGGCAATGAAGCTCCTTTTTGGCGTTGGGTCGTGTTAGGTTACTGTATTGTTGCCGGAAGGCTATAGTTTCATACACAGACAGAGCTGAAGTAATGCTGAAGCAGAGATACTTGGACTGCAGAAGGATTACTTTTGCTCTTCTTGCTACCTCTGCCTCTGGTTTACCAGCGGCCCCTTCGAATTCCAAAGGTTCACTTTCTTCGCTCGTACCTCTTTTCACCTCTTTTTCTATATATATATATAGATAGTATACTTCTTGCACTTCTCTGATCTCAATACACAATTCCATTTGCGATTATCTTCCTAATCATCAATCACTTCTCAATTTCATGTGAGTTCGTTGCATTTCATTTCTGCCTTCTTCTCCGCCCCCTACCATGTTCTGGAATTATAAGGAAATTAGTGACTCGAATTCTACTTTAGAAGCAAGTTACGTTAAGTTAATTCAGTATCCTTTTTTAGCTTATTTACATTTGTCGTTTATACGATCTGAATATGATTTTACCTCTTCTATCTCCATAAGTAGTGACGTAGCTGCTACTCTTGCTACTTTGCCATATTAACTTATTTTCTCACAAATTCTATTTTCAGATTATCAAAGTCTTTACCGTGTTCTTGAAGCCTGCAGACTCTTCCACATGAATTCCAAAACTGTTATCGAAACGCATGCACGAATTATTAAATTTGGATATGGAAACTACCCTACTCTCATCGCCTCTCTAGTATCTACTTATCAACGTGTTGGTTGCCTTAATCGGGTTCATCAACTTCTTGATATACTCTGCTCTAAGCAGCTTGATTTAGTTGCAATGAACTTACTCATTGGAAACTTTATGAAAATCGGGGAGTGCAAATTTGCTAAAAAGGTATTTTATAAAATGCCTTTCCGTGATGTGGTAACATGGAACTCAATCATTGGAGGTTGTGTGAAGAATGCTCGGTATGATGAGGCATTTAGATTCTTTAGACAGATGCTGACGTCAAATATTCAGCCGGATGGATTTACATTTGCTTCCATATTGAATGCATGTGCTCAACTCGGAGCTCCTAGTAACACTCATTGGGTTCATGCTCAGATGACTCAGAAAAAAATTGAGCTTAATTCTTTATTAACTTGTGCACTCATAGACGCATACTCAAAATGTGGTAGCATCCAAATTGCAAAGGAAATATTTAGTAATATTCCTCACAGTGATACTTCCGTTTGGAATGTGATGATCAAAGGGCTTGCGATTCATGGGCTTGCAATGGATGCATTATCGTTATTTTTGAGGATGGAGCATGAGAGTGTTCTGCCTGATGCCATCACCTTTTTGGGTGTTTTAACAGCTTGCAACCATGGTTGTTTAATTGACCATGGTCGTAGATATTTTGAGCTGATGAAAAGTCATTATTCAATTCAGCCGCAGCTTGAGCATTATGGTGTCATGGTTGACCTTTATAGTCGAGCTGGGTTTCTGGAAGAGGCCTATTCTCTAATCGTGACAATGCCGATAGAGCCTGATGTTGTCACGTGGCGGACACTTTTAAGTGGTTGTAGAATTTACAAAAATCATAAACTTGCAGAAGTTGCTATTGCAAATATGTCTCAACGTAAGAGTGGGGATTACGTATTATTATCAAATATATATTGTTCTCTCAACAGATGGAAGGAAGCAGAAACAGTTAGAAAGATGATGAAAATCAATAGAGTTCGTAAGAAACGTGGAAAAAGCTGGATTGAGTTGGGAGGTACCATTCAACACTTCAAGTCAGGTGATCGATTGCATCCAGAAAGCGATGCAATAGAAAAAGTGCTATGCAGTTTGATGAAGAGAACTCGGACGGAGGGATATATGCCTGTGACGGAGTTGGTTTTCATGGATATCTCTGAGGAGGAGAAGGAAGAGAACTTATCATTTCATAGTGAAAAGATGGCATTGGCTTATGCGATCTTGAAAACTAGTCCTGGGGCAAAGATCAGTATTTCAAAGAACCTGCGGATCTGTGATGATTGCCATACATGGATTAAATTAGTTTCAAGAGTGCTGTGTAGAGTTATAGTAGTGAGGGATCGGATCCGGTTTCATCAATTTGAAGGTGGCATGTGTTCTTGTGGTGATCGTTGGTAGAGGATGCATCTCAATAAAATAACAAGGTGATACTTTTTCGTTTTAAAAATTATACTAAGTAATAAGGTCTAGTTACGCAATCATTTTGTTTTTATTCTTTCATAAATTAAGCTTGTAAATCTCCATTCCACCTTTCAATGTCATATTTTGTTAACAACGTTTTTT

mRNA sequence

ATGCTGAAGCAGAGATACTTGGACTGCAGAAGGATTACTTTTGCTCTTCTTGCTACCTCTGCCTCTGGTTTACCAGCGGCCCCTTCGAATTCCAAAGATTATCAAAGTCTTTACCGTGTTCTTGAAGCCTGCAGACTCTTCCACATGAATTCCAAAACTGTTATCGAAACGCATGCACGAATTATTAAATTTGGATATGGAAACTACCCTACTCTCATCGCCTCTCTAGTATCTACTTATCAACGTGTTGGTTGCCTTAATCGGGTTCATCAACTTCTTGATATACTCTGCTCTAAGCAGCTTGATTTAGTTGCAATGAACTTACTCATTGGAAACTTTATGAAAATCGGGGAGTGCAAATTTGCTAAAAAGGTATTTTATAAAATGCCTTTCCGTGATGTGGTAACATGGAACTCAATCATTGGAGGTTGTGTGAAGAATGCTCGGTATGATGAGGCATTTAGATTCTTTAGACAGATGCTGACGTCAAATATTCAGCCGGATGGATTTACATTTGCTTCCATATTGAATGCATGTGCTCAACTCGGAGCTCCTAGTAACACTCATTGGGTTCATGCTCAGATGACTCAGAAAAAAATTGAGCTTAATTCTTTATTAACTTGTGCACTCATAGACGCATACTCAAAATGTGGTAGCATCCAAATTGCAAAGGAAATATTTAGTAATATTCCTCACAGTGATACTTCCGTTTGGAATGTGATGATCAAAGGGCTTGCGATTCATGGGCTTGCAATGGATGCATTATCGTTATTTTTGAGGATGGAGCATGAGAGTGTTCTGCCTGATGCCATCACCTTTTTGGGTGTTTTAACAGCTTGCAACCATGGTTGTTTAATTGACCATGGTCGTAGATATTTTGAGCTGATGAAAAGTCATTATTCAATTCAGCCGCAGCTTGAGCATTATGGTGTCATGGTTGACCTTTATAGTCGAGCTGGGTTTCTGGAAGAGGCCTATTCTCTAATCGTGACAATGCCGATAGAGCCTGATGTTGTCACGTGGCGGACACTTTTAAGTGGTTGTAGAATTTACAAAAATCATAAACTTGCAGAAGTTGCTATTGCAAATATGTCTCAACGTAAGAGTGGGGATTACGTATTATTATCAAATATATATTGTTCTCTCAACAGATGGAAGGAAGCAGAAACAGTTAGAAAGATGATGAAAATCAATAGAGTTCGTAAGAAACGTGGAAAAAGCTGGATTGAGTTGGGAGGTACCATTCAACACTTCAAGTCAGGTGATCGATTGCATCCAGAAAGCGATGCAATAGAAAAAGTGCTATGCAGTTTGATGAAGAGAACTCGGACGGAGGGATATATGCCTGTGACGGAGTTGGTTTTCATGGATATCTCTGAGGAGGAGAAGGAAGAGAACTTATCATTTCATAGTGAAAAGATGGCATTGGCTTATGCGATCTTGAAAACTAGTCCTGGGGCAAAGATCAGTATTTCAAAGAACCTGCGGATCTGTGATGATTGCCATACATGGATTAAATTAGTTTCAAGAGTGCTGTGTAGAGTTATAGTAGTGAGGGATCGGATCCGGTTTCATCAATTTGAAGGTGGCATGTGTTCTTGTGGTGATCGTTGGTAG

Coding sequence (CDS)

ATGCTGAAGCAGAGATACTTGGACTGCAGAAGGATTACTTTTGCTCTTCTTGCTACCTCTGCCTCTGGTTTACCAGCGGCCCCTTCGAATTCCAAAGATTATCAAAGTCTTTACCGTGTTCTTGAAGCCTGCAGACTCTTCCACATGAATTCCAAAACTGTTATCGAAACGCATGCACGAATTATTAAATTTGGATATGGAAACTACCCTACTCTCATCGCCTCTCTAGTATCTACTTATCAACGTGTTGGTTGCCTTAATCGGGTTCATCAACTTCTTGATATACTCTGCTCTAAGCAGCTTGATTTAGTTGCAATGAACTTACTCATTGGAAACTTTATGAAAATCGGGGAGTGCAAATTTGCTAAAAAGGTATTTTATAAAATGCCTTTCCGTGATGTGGTAACATGGAACTCAATCATTGGAGGTTGTGTGAAGAATGCTCGGTATGATGAGGCATTTAGATTCTTTAGACAGATGCTGACGTCAAATATTCAGCCGGATGGATTTACATTTGCTTCCATATTGAATGCATGTGCTCAACTCGGAGCTCCTAGTAACACTCATTGGGTTCATGCTCAGATGACTCAGAAAAAAATTGAGCTTAATTCTTTATTAACTTGTGCACTCATAGACGCATACTCAAAATGTGGTAGCATCCAAATTGCAAAGGAAATATTTAGTAATATTCCTCACAGTGATACTTCCGTTTGGAATGTGATGATCAAAGGGCTTGCGATTCATGGGCTTGCAATGGATGCATTATCGTTATTTTTGAGGATGGAGCATGAGAGTGTTCTGCCTGATGCCATCACCTTTTTGGGTGTTTTAACAGCTTGCAACCATGGTTGTTTAATTGACCATGGTCGTAGATATTTTGAGCTGATGAAAAGTCATTATTCAATTCAGCCGCAGCTTGAGCATTATGGTGTCATGGTTGACCTTTATAGTCGAGCTGGGTTTCTGGAAGAGGCCTATTCTCTAATCGTGACAATGCCGATAGAGCCTGATGTTGTCACGTGGCGGACACTTTTAAGTGGTTGTAGAATTTACAAAAATCATAAACTTGCAGAAGTTGCTATTGCAAATATGTCTCAACGTAAGAGTGGGGATTACGTATTATTATCAAATATATATTGTTCTCTCAACAGATGGAAGGAAGCAGAAACAGTTAGAAAGATGATGAAAATCAATAGAGTTCGTAAGAAACGTGGAAAAAGCTGGATTGAGTTGGGAGGTACCATTCAACACTTCAAGTCAGGTGATCGATTGCATCCAGAAAGCGATGCAATAGAAAAAGTGCTATGCAGTTTGATGAAGAGAACTCGGACGGAGGGATATATGCCTGTGACGGAGTTGGTTTTCATGGATATCTCTGAGGAGGAGAAGGAAGAGAACTTATCATTTCATAGTGAAAAGATGGCATTGGCTTATGCGATCTTGAAAACTAGTCCTGGGGCAAAGATCAGTATTTCAAAGAACCTGCGGATCTGTGATGATTGCCATACATGGATTAAATTAGTTTCAAGAGTGCTGTGTAGAGTTATAGTAGTGAGGGATCGGATCCGGTTTCATCAATTTGAAGGTGGCATGTGTTCTTGTGGTGATCGTTGGTAG

Protein sequence

MLKQRYLDCRRITFALLATSASGLPAAPSNSKDYQSLYRVLEACRLFHMNSKTVIETHARIIKFGYGNYPTLIASLVSTYQRVGCLNRVHQLLDILCSKQLDLVAMNLLIGNFMKIGECKFAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNTHWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIHGLAMDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEHYGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSQRKSGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW*
BLAST of Csa1G666990 vs. Swiss-Prot
Match: PP428_ARATH (Pentatricopeptide repeat-containing protein At5g50990 OS=Arabidopsis thaliana GN=PCMP-H59 PE=2 SV=2)

HSP 1 Score: 547.7 bits (1410), Expect = 1.4e-154
Identity = 272/530 (51.32%), Postives = 372/530 (70.19%), Query Frame = 1

Query: 10  RRITFALLATSASGLPAAPSNSKDYQSLYRVLEACRLFHMNSKTVIETHARIIKFGYGNY 69
           RR     L++S++      SN  D+  L +VLE+C+    NSK V++ HA+I K GYG Y
Sbjct: 12  RRFCITSLSSSSA------SNLTDHGMLKQVLESCKA-PSNSKCVLQAHAQIFKLGYGTY 71

Query: 70  PTLIASLVSTYQRVGCLNRVHQLLDILCSKQLDLVAMNLLIGNFMKIGECKFAKKVFYKM 129
           P+L+ S V+ Y+R        +LL    S    +  +NL+I + MKIGE   AKKV    
Sbjct: 72  PSLLVSTVAAYRRCNRSYLARRLLLWFLSLSPGVCNINLIIESLMKIGESGLAKKVLRNA 131

Query: 130 PFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLT-SNIQPDGFTFASILNACAQLGAPSNT 189
             ++V+TWN +IGG V+N +Y+EA +  + ML+ ++I+P+ F+FAS L ACA+LG   + 
Sbjct: 132 SDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHA 191

Query: 190 HWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIH 249
            WVH+ M    IELN++L+ AL+D Y+KCG I  ++E+F ++  +D S+WN MI G A H
Sbjct: 192 KWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATH 251

Query: 250 GLAMDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEH 309
           GLA +A+ +F  ME E V PD+ITFLG+LT C+H  L++ G+ YF LM   +SIQP+LEH
Sbjct: 252 GLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEH 311

Query: 310 YGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSQRK 369
           YG MVDL  RAG ++EAY LI +MPIEPDVV WR+LLS  R YKN +L E+AI N+S+ K
Sbjct: 312 YGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKAK 371

Query: 370 SGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPES 429
           SGDYVLLSNIY S  +W+ A+ VR++M    +RK +GKSW+E GG I  FK+GD  H E+
Sbjct: 372 SGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIET 431

Query: 430 DAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAK 489
            AI KVL  L+++T+++G++  T+LV MD+SEEEKEENL++HSEK+ALAY ILK+SPG +
Sbjct: 432 KAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTE 491

Query: 490 ISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 539
           I I KN+R+C DCH WIK VS++L RVI++RDRIRFH+FE G+CSC D W
Sbjct: 492 IRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCRDYW 534

BLAST of Csa1G666990 vs. Swiss-Prot
Match: PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 3.8e-104
Identity = 195/498 (39.16%), Postives = 291/498 (58.43%), Query Frame = 1

Query: 56  ETHARIIKFGYGNYPTLIASLVSTYQRVGCL---------NRVHQLLDILCSKQL---DL 115
           + H   +K+G+G    ++++LV  Y   G +         N + + + ++  ++    ++
Sbjct: 149 QIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEI 208

Query: 116 VAMNLLIGNFMKIGECKFAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTS 175
           V  N++I  +M++G+CK A+ +F KM  R VV+WN++I G   N  + +A   FR+M   
Sbjct: 209 VLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKG 268

Query: 176 NIQPDGFTFASILNACAQLGAPSNTHWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIA 235
           +I+P+  T  S+L A ++LG+     W+H       I ++ +L  ALID YSKCG I+ A
Sbjct: 269 DIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKA 328

Query: 236 KEIFSNIPHSDTSVWNVMIKGLAIHGLAMDALSLFLRMEHESVLPDAITFLGVLTACNHG 295
             +F  +P  +   W+ MI G AIHG A DA+  F +M    V P  + ++ +LTAC+HG
Sbjct: 329 IHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHG 388

Query: 296 CLIDHGRRYFELMKSHYSIQPQLEHYGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRT 355
            L++ GRRYF  M S   ++P++EHYG MVDL  R+G L+EA   I+ MPI+PD V W+ 
Sbjct: 389 GLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKA 448

Query: 356 LLSGCRIYKNHKLAE-VA--IANMSQRKSGDYVLLSNIYCSLNRWKEAETVRKMMKINRV 415
           LL  CR+  N ++ + VA  + +M    SG YV LSN+Y S   W E   +R  MK   +
Sbjct: 449 LLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDI 508

Query: 416 RKKRGKSWIELGGTIQHFKSGDRLHPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDISE 475
           RK  G S I++ G +  F   D  HP++  I  +L  +  + R  GY P+T  V +++ E
Sbjct: 509 RKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEE 568

Query: 476 EEKEENLSFHSEKMALAYAILKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRD 535
           E+KE  L +HSEK+A A+ ++ TSPG  I I KNLRIC+DCH+ IKL+S+V  R I VRD
Sbjct: 569 EDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRD 628

Query: 536 RIRFHQFEGGMCSCGDRW 539
           R RFH F+ G CSC D W
Sbjct: 629 RKRFHHFQDGSCSCMDYW 646


HSP 2 Score: 64.7 bits (156), Expect = 3.5e-09
Identity = 49/165 (29.70%), Postives = 73/165 (44.24%), Query Frame = 1

Query: 121 FAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAF----RFFRQMLTSNIQPDGFTFASIL 180
           +A K+F +MP R+  +WN+II G  ++   D+A      F+  M    ++P+ FTF S+L
Sbjct: 77  YAHKIFNQMPQRNCFSWNTIIRGFSESDE-DKALIAITLFYEMMSDEFVEPNRFTFPSVL 136

Query: 181 NACAQLGAPSNTHWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIF-SNIPHSDT 240
            ACA+ G       +H    +     +  +   L+  Y  CG ++ A+ +F  NI   D 
Sbjct: 137 KACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDM 196

Query: 241 SV-------------WNVMIKGLAIHGLAMDALSLFLRMEHESVL 268
            V             WNVMI G    G    A  LF +M   SV+
Sbjct: 197 VVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVV 240

BLAST of Csa1G666990 vs. Swiss-Prot
Match: PP295_ARATH (Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.1e-103
Identity = 197/492 (40.04%), Postives = 301/492 (61.18%), Query Frame = 1

Query: 57  THARIIKFGYGNYPTLIASLVSTYQRVGCLNRVHQLLDILCSKQLDLVAMNLLIGNFMKI 116
           THA+I+ FG    P +  SL++ Y   G L    ++ D   SK  DL A N ++  + K 
Sbjct: 84  THAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSK--DLPAWNSVVNAYAKA 143

Query: 117 GECKFAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSN-----IQPDGFT 176
           G    A+K+F +MP R+V++W+ +I G V   +Y EA   FR+M         ++P+ FT
Sbjct: 144 GLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFT 203

Query: 177 FASILNACAQLGAPSNTHWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNI- 236
            +++L+AC +LGA     WVHA + +  +E++ +L  ALID Y+KCGS++ AK +F+ + 
Sbjct: 204 MSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALG 263

Query: 237 PHSDTSVWNVMIKGLAIHGLAMDALSLFLRME-HESVLPDAITFLGVLTACNHGCLIDHG 296
              D   ++ MI  LA++GL  +   LF  M   +++ P+++TF+G+L AC H  LI+ G
Sbjct: 264 SKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEG 323

Query: 297 RRYFELMKSHYSIQPQLEHYGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCR 356
           + YF++M   + I P ++HYG MVDLY R+G ++EA S I +MP+EPDV+ W +LLSG R
Sbjct: 324 KSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSR 383

Query: 357 IYKNHKLAEVAIANMSQ---RKSGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGK 416
           +  + K  E A+  + +     SG YVLLSN+Y    RW E + +R  M++  + K  G 
Sbjct: 384 MLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGC 443

Query: 417 SWIELGGTIQHFKSGDRLHPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEEN 476
           S++E+ G +  F  GD    ES+ I  +L  +M+R R  GY+  T+ V +D++E++KE  
Sbjct: 444 SYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIA 503

Query: 477 LSFHSEKMALAYAILKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQ 536
           LS+HSEK+A+A+ ++KT PG  + I KNLRIC DCH  +K++S++  R IVVRD  RFH 
Sbjct: 504 LSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHH 563

Query: 537 FEGGMCSCGDRW 539
           F  G CSC D W
Sbjct: 564 FRDGSCSCRDFW 573

BLAST of Csa1G666990 vs. Swiss-Prot
Match: PP330_ARATH (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 377.9 bits (969), Expect = 1.9e-103
Identity = 197/474 (41.56%), Postives = 289/474 (60.97%), Query Frame = 1

Query: 69  YPTLIASLVSTYQRVGCLNRVHQLLDILCSKQLDLVAMNLLIGNFMKIGECKFAKKVFYK 128
           YP LI + V+T   V     +H ++ I       +   N L+  +   G+   A KVF K
Sbjct: 124 YPFLIKA-VTTMADVRLGETIHSVV-IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDK 183

Query: 129 MPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNT 188
           MP +D+V WNS+I G  +N + +EA   + +M +  I+PDGFT  S+L+ACA++GA +  
Sbjct: 184 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 243

Query: 189 HWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIH 248
             VH  M +  +  N   +  L+D Y++CG ++ AK +F  +   ++  W  +I GLA++
Sbjct: 244 KRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 303

Query: 249 GLAMDALSLFLRMEH-ESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLE 308
           G   +A+ LF  ME  E +LP  ITF+G+L AC+H  ++  G  YF  M+  Y I+P++E
Sbjct: 304 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIE 363

Query: 309 HYGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVA---IANM 368
           H+G MVDL +RAG +++AY  I +MP++P+VV WRTLL  C ++ +  LAE A   I  +
Sbjct: 364 HFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQL 423

Query: 369 SQRKSGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRL 428
               SGDYVLLSN+Y S  RW + + +RK M  + V+K  G S +E+G  +  F  GD+ 
Sbjct: 424 EPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKS 483

Query: 429 HPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTS 488
           HP+SDAI   L  +  R R+EGY+P    V++D+ EEEKE  + +HSEK+A+A+ ++ T 
Sbjct: 484 HPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTP 543

Query: 489 PGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 539
             + I++ KNLR+C DCH  IKLVS+V  R IVVRDR RFH F+ G CSC D W
Sbjct: 544 ERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595


HSP 2 Score: 100.9 bits (250), Expect = 4.5e-20
Identity = 63/232 (27.16%), Postives = 112/232 (48.28%), Query Frame = 1

Query: 121 FAKKVFYKMPFR-DVVTWNSIIGGCVKNARYDEAFRFFRQMLTSN-IQPDGFTFASILNA 180
           +A KVF K+    +V  WN++I G  +      AF  +R+M  S  ++PD  T+  ++ A
Sbjct: 71  YAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKA 130

Query: 181 CAQLGAPSNTHWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVW 240
              +        +H+ + +        +  +L+  Y+ CG +  A ++F  +P  D   W
Sbjct: 131 VTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAW 190

Query: 241 NVMIKGLAIHGLAMDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKS 300
           N +I G A +G   +AL+L+  M  + + PD  T + +L+AC     +  G+R    M  
Sbjct: 191 NSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM-I 250

Query: 301 HYSIQPQLEHYGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRI 351
              +   L    V++DLY+R G +EEA +L   M ++ + V+W +L+ G  +
Sbjct: 251 KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAV 300

BLAST of Csa1G666990 vs. Swiss-Prot
Match: PP449_ARATH (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 4.2e-103
Identity = 198/518 (38.22%), Postives = 299/518 (57.72%), Query Frame = 1

Query: 26  AAPSNSKDYQSLYRVLEACRLFHMNSKTVIETHARIIKFGYGNYPTLIASLVSTYQRVGC 85
           +AP N+  + SL   L+AC       +T  + HA+I K GY N    + SL+++Y   G 
Sbjct: 110 SAPHNAYTFPSL---LKACSNLSAFEETT-QIHAQITKLGYENDVYAVNSLINSYAVTGN 169

Query: 86  LNRVHQLLDILCSKQLDLVAMNLLIGNFMKIGECKFAKKVFYKMPFRDVVTWNSIIGGCV 145
               H L D +   + D V+ N +I  ++K G+   A  +F KM  ++ ++W ++I G V
Sbjct: 170 FKLAHLLFDRI--PEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYV 229

Query: 146 KNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNTHWVHAQMTQKKIELNSL 205
           +     EA + F +M  S+++PD  + A+ L+ACAQLGA     W+H+ + + +I ++S+
Sbjct: 230 QADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSV 289

Query: 206 LTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIHGLAMDALSLFLRMEHES 265
           L C LID Y+KCG ++ A E+F NI       W  +I G A HG   +A+S F+ M+   
Sbjct: 290 LGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMG 349

Query: 266 VLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEHYGVMVDLYSRAGFLEEA 325
           + P+ ITF  VLTAC++  L++ G+  F  M+  Y+++P +EHYG +VDL  RAG L+EA
Sbjct: 350 IKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEA 409

Query: 326 YSLIVTMPIEPDVVTWRTLLSGCRIYKN----HKLAEVAIANMSQRKSGDYVLLSNIYCS 385
              I  MP++P+ V W  LL  CRI+KN     ++ E+ IA +     G YV  +NI+  
Sbjct: 410 KRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIA-IDPYHGGRYVHKANIHAM 469

Query: 386 LNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPESDAIEKVLCSLMKR 445
             +W +A   R++MK   V K  G S I L GT   F +GDR HPE + I+     + ++
Sbjct: 470 DKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRK 529

Query: 446 TRTEGYMPVTELVFMD-ISEEEKEENLSFHSEKMALAYAILKTSPGAKISISKNLRICDD 505
               GY+P  E + +D + ++E+E  +  HSEK+A+ Y ++KT PG  I I KNLR+C D
Sbjct: 530 LEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKD 589

Query: 506 CHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 539
           CH   KL+S++  R IV+RDR RFH F  G CSCGD W
Sbjct: 590 CHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620


HSP 2 Score: 78.2 bits (191), Expect = 3.1e-13
Identity = 45/147 (30.61%), Postives = 76/147 (51.70%), Query Frame = 1

Query: 121 FAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACA 180
           +A+ VF      D   WN +I G   +   + +   +++ML S+   + +TF S+L AC+
Sbjct: 67  YAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACS 126

Query: 181 QLGAPSNTHWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNV 240
            L A   T  +HAQ+T+   E +     +LI++Y+  G+ ++A  +F  IP  D   WN 
Sbjct: 127 NLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNS 186

Query: 241 MIKGLAIHGLAMDALSLFLRMEHESVL 268
           +IKG    G    AL+LF +M  ++ +
Sbjct: 187 VIKGYVKAGKMDIALTLFRKMAEKNAI 213

BLAST of Csa1G666990 vs. TrEMBL
Match: A5BED5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022557 PE=4 SV=1)

HSP 1 Score: 671.0 bits (1730), Expect = 1.2e-189
Identity = 318/517 (61.51%), Postives = 402/517 (77.76%), Query Frame = 1

Query: 22  SGLPAAPSNSKDYQSLYRVLEACRLFHMNSKTVIETHARIIKFGYGNYPTLIASLVSTYQ 81
           SG        +D+Q L  +LEAC+ F  + +T  ++HA+IIKFGYG YP+LI SLVSTY 
Sbjct: 47  SGTTDMVIQERDHQKLNCILEACK-FSSDFRTAFQSHAKIIKFGYGTYPSLITSLVSTYA 106

Query: 82  RVGCLNRVHQLLDILCSKQLDLVAMNLLIGNFMKIGECKFAKKVFYKMPFRDVVTWNSII 141
              CL+  HQLLD +     DL+  NL+I + MK+GE  FAK+VF KM  RDVVTWNS+I
Sbjct: 107 HCDCLDLAHQLLDEMPYWGFDLITANLIIASLMKVGEFDFAKRVFRKMLRRDVVTWNSMI 166

Query: 142 GGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNTHWVHAQMTQKKIE 201
           GGCV+N R++EA RFFR+ML SN++PDGFTFAS++N CA+LG+  +   VH  M +KKI+
Sbjct: 167 GGCVRNERFEEALRFFREMLNSNVEPDGFTFASVINGCARLGSSHHAELVHGLMIEKKIQ 226

Query: 202 LNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIHGLAMDALSLFLRM 261
           LN +L+ ALID YSKCG I  AK++F++I H D SVWN MI GLAIHGLA+DA+ +F +M
Sbjct: 227 LNFILSSALIDLYSKCGRINTAKKVFNSIQHDDVSVWNSMINGLAIHGLALDAIGVFSQM 286

Query: 262 EHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEHYGVMVDLYSRAGF 321
           E ESV PD+ITF+G+LTAC+H  L++ GRRYF+LM+ HYSIQPQLEHYG MVDL  RAG 
Sbjct: 287 EMESVSPDSITFIGILTACSHCGLVEQGRRYFDLMRRHYSIQPQLEHYGAMVDLLGRAGL 346

Query: 322 LEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSQRKSGDYVLLSNIYCS 381
           +EEAY++I  MP+EPD+V WR LLS CR +KN +L EVAIA +S   SGDY+LLSN+YCS
Sbjct: 347 VEEAYAMIKAMPMEPDIVIWRALLSACRNFKNPELGEVAIAKISHLNSGDYILLSNMYCS 406

Query: 382 LNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPESDAIEKVLCSLMKR 441
           L +W  AE VR+MMK + VRK RG+SW+ELGG I  FK+GDR HPE+ AI KVL  L++R
Sbjct: 407 LEKWDSAERVREMMKRDGVRKNRGRSWVELGGVIHQFKAGDRSHPETGAIYKVLEGLIRR 466

Query: 442 TRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAKISISKNLRICDDC 501
           T+ EG+MP T+LV MD+S+EE+EENL+ HSEK+ALAY ILKTSPG +I +SKNLR C DC
Sbjct: 467 TKLEGFMPATDLVLMDVSDEEREENLNSHSEKLALAYVILKTSPGTEIRVSKNLRTCHDC 526

Query: 502 HTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 539
           H W+K++SR+L RVI+VRDRIRFHQFEGG+CSC D W
Sbjct: 527 HCWMKILSRLLSRVIIVRDRIRFHQFEGGLCSCRDYW 562

BLAST of Csa1G666990 vs. TrEMBL
Match: A0A0D2PYT6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G210900 PE=4 SV=1)

HSP 1 Score: 660.2 bits (1702), Expect = 2.1e-186
Identity = 319/520 (61.35%), Postives = 401/520 (77.12%), Query Frame = 1

Query: 19  TSASGLPAAPSNSKDYQSLYRVLEACRLFHMNSKTVIETHARIIKFGYGNYPTLIASLVS 78
           TS    P     S+D++S+Y+VLEACRL   + K     HARI K GYG YP+L+ASLVS
Sbjct: 21  TSLLSAPDFLHYSRDHRSVYKVLEACRL-SSDYKAASAIHARIFKLGYGTYPSLVASLVS 80

Query: 79  TYQRVGCLNRVHQLLDILCSKQLDLVAMNLLIGNFMKIGECKFAKKVFYKMPFRDVVTWN 138
           TY +   L    +LLD +     ++V +NL+I + M +GE  FAKK F+K P RDV+TWN
Sbjct: 81  TYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVRDVITWN 140

Query: 139 SIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNTHWVHAQMTQK 198
            +IGG V+NAR++EA  FFR+ML SN++PD FTFAS++  CA+LGA ++  WVH  MT+K
Sbjct: 141 LMIGGYVRNARFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTKK 200

Query: 199 KIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIHGLAMDALSLF 258
           +IELN +L+ ALID YSKCG IQ AKE+F++  HSD SVWN MI GLA HGL  DA+++F
Sbjct: 201 EIELNPILSSALIDMYSKCGRIQTAKEVFNSADHSDVSVWNAMINGLAAHGLPFDAIAVF 260

Query: 259 LRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEHYGVMVDLYSR 318
            +ME E++ PD+ITF+G+LTAC+H  L++ GR+YF LM S YSI+PQ+EHYGVMVDL+ R
Sbjct: 261 SKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGR 320

Query: 319 AGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSQRKSGDYVLLSNI 378
           AG LEEAY++I  MP+EPDVV WR LLS CRIY+  KL EVAIANMS+ KSGDYVLLSN+
Sbjct: 321 AGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLKSGDYVLLSNM 380

Query: 379 YCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPESDAIEKVLCSL 438
           YCS+ RW+ AE VR++MK   +RK RG+SWIELGG I  FK+GDR HPE++ + KVL  L
Sbjct: 381 YCSMKRWESAELVRELMKKKGIRKIRGRSWIELGGVIHRFKAGDRSHPETEGLYKVLDGL 440

Query: 439 MKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAKISISKNLRIC 498
           ++RT+ EG++P T+LV MDISEEEKE NL+ HSEK+ALAY ILKTSPG +I ISKNLRIC
Sbjct: 441 IRRTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRIC 500

Query: 499 DDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 539
            DCH WIKLVS++L RVI+VRDRIRFHQFEGG CSC D W
Sbjct: 501 HDCHNWIKLVSKLLIRVIIVRDRIRFHQFEGGSCSCEDYW 539

BLAST of Csa1G666990 vs. TrEMBL
Match: A0A061G6N9_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_014769 PE=4 SV=1)

HSP 1 Score: 647.1 bits (1668), Expect = 1.9e-182
Identity = 306/520 (58.85%), Postives = 405/520 (77.88%), Query Frame = 1

Query: 19  TSASGLPAAPSNSKDYQSLYRVLEACRLFHMNSKTVIETHARIIKFGYGNYPTLIASLVS 78
           TS S  P    +S+D++++  +LEAC+L   + KT    HA I K GYG YP+L+ +L+S
Sbjct: 24  TSLSFSPDFLHHSRDHRTVCEILEACKL-SSDYKTASAIHAIIFKLGYGTYPSLVTTLIS 83

Query: 79  TYQRVGCLNRVHQLLDILCSKQLDLVAMNLLIGNFMKIGECKFAKKVFYKMPFRDVVTWN 138
           TY + G L   HQL+D +     +LV +NL+I + MK+GE   AKKVF+KMP RD+VTWN
Sbjct: 84  TYLQCGWLVLAHQLIDQVFRSDCNLVILNLVIEHLMKLGEYGSAKKVFHKMPVRDLVTWN 143

Query: 139 SIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNTHWVHAQMTQK 198
            +IGG V+NAR++EA  FFR+ML SN++PD FTFAS++  CA+LGA ++  WVH+ +T+K
Sbjct: 144 IMIGGYVRNARFEEALTFFREMLGSNVKPDKFTFASVITGCARLGALNHALWVHSLITEK 203

Query: 199 KIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIHGLAMDALSLF 258
           +IELN++L  ALID YSKCG I  AKE+F++  H+D S+WN MI GLAIHGLA +A+++F
Sbjct: 204 EIELNAILNAALIDMYSKCGRIHTAKEVFNSAEHNDVSIWNAMINGLAIHGLAFEAIAVF 263

Query: 259 LRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEHYGVMVDLYSR 318
            +M  E++LPD+ITF+ +LTAC+H  L++ G++YF+LM  HYSIQPQ+EHYG MVDLY R
Sbjct: 264 SKMRVENILPDSITFIVLLTACSHSGLVEEGQKYFDLMSGHYSIQPQIEHYGAMVDLYGR 323

Query: 319 AGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSQRKSGDYVLLSNI 378
           AG LEEAY++I  MP+EPD+V WR LLS C+ Y+  +L EVAIAN+S+ +SGDYVLLSNI
Sbjct: 324 AGQLEEAYAIIKAMPMEPDIVIWRALLSACQTYRKPELGEVAIANISRLESGDYVLLSNI 383

Query: 379 YCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPESDAIEKVLCSL 438
           YCS+ +W+ AE +R+MMK   +RK RG+SWIELGG I  FK+GDR HPE++ + KVL  L
Sbjct: 384 YCSVKKWESAERLREMMKKKGIRKIRGRSWIELGGIIHRFKAGDRSHPETEGLYKVLEGL 443

Query: 439 MKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAKISISKNLRIC 498
           ++RT+ +G++P TELV MDISEEEKE NL+ HSEK+ALAY ILKTSPG +I ISKNLRIC
Sbjct: 444 IQRTKLKGFLPETELVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGTEIMISKNLRIC 503

Query: 499 DDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 539
            DCH WIK+VS++L RVI+VRDRIRFH+FEGG+CSC D W
Sbjct: 504 HDCHNWIKMVSKLLIRVIIVRDRIRFHRFEGGLCSCADYW 542

BLAST of Csa1G666990 vs. TrEMBL
Match: A0A061G016_THECC (Tetratricopeptide repeat-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_014769 PE=4 SV=1)

HSP 1 Score: 647.1 bits (1668), Expect = 1.9e-182
Identity = 306/520 (58.85%), Postives = 405/520 (77.88%), Query Frame = 1

Query: 19  TSASGLPAAPSNSKDYQSLYRVLEACRLFHMNSKTVIETHARIIKFGYGNYPTLIASLVS 78
           TS S  P    +S+D++++  +LEAC+L   + KT    HA I K GYG YP+L+ +L+S
Sbjct: 24  TSLSFSPDFLHHSRDHRTVCEILEACKL-SSDYKTASAIHAIIFKLGYGTYPSLVTTLIS 83

Query: 79  TYQRVGCLNRVHQLLDILCSKQLDLVAMNLLIGNFMKIGECKFAKKVFYKMPFRDVVTWN 138
           TY + G L   HQL+D +     +LV +NL+I + MK+GE   AKKVF+KMP RD+VTWN
Sbjct: 84  TYLQCGWLVLAHQLIDQVFRSDCNLVILNLVIEHLMKLGEYGSAKKVFHKMPVRDLVTWN 143

Query: 139 SIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNTHWVHAQMTQK 198
            +IGG V+NAR++EA  FFR+ML SN++PD FTFAS++  CA+LGA ++  WVH+ +T+K
Sbjct: 144 IMIGGYVRNARFEEALTFFREMLGSNVKPDKFTFASVITGCARLGALNHALWVHSLITEK 203

Query: 199 KIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIHGLAMDALSLF 258
           +IELN++L  ALID YSKCG I  AKE+F++  H+D S+WN MI GLAIHGLA +A+++F
Sbjct: 204 EIELNAILNAALIDMYSKCGRIHTAKEVFNSAEHNDVSIWNAMINGLAIHGLAFEAIAVF 263

Query: 259 LRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEHYGVMVDLYSR 318
            +M  E++LPD+ITF+ +LTAC+H  L++ G++YF+LM  HYSIQPQ+EHYG MVDLY R
Sbjct: 264 SKMRVENILPDSITFIVLLTACSHSGLVEEGQKYFDLMSGHYSIQPQIEHYGAMVDLYGR 323

Query: 319 AGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSQRKSGDYVLLSNI 378
           AG LEEAY++I  MP+EPD+V WR LLS C+ Y+  +L EVAIAN+S+ +SGDYVLLSNI
Sbjct: 324 AGQLEEAYAIIKAMPMEPDIVIWRALLSACQTYRKPELGEVAIANISRLESGDYVLLSNI 383

Query: 379 YCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPESDAIEKVLCSL 438
           YCS+ +W+ AE +R+MMK   +RK RG+SWIELGG I  FK+GDR HPE++ + KVL  L
Sbjct: 384 YCSVKKWESAERLREMMKKKGIRKIRGRSWIELGGIIHRFKAGDRSHPETEGLYKVLEGL 443

Query: 439 MKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAKISISKNLRIC 498
           ++RT+ +G++P TELV MDISEEEKE NL+ HSEK+ALAY ILKTSPG +I ISKNLRIC
Sbjct: 444 IQRTKLKGFLPETELVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGTEIMISKNLRIC 503

Query: 499 DDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 539
            DCH WIK+VS++L RVI+VRDRIRFH+FEGG+CSC D W
Sbjct: 504 HDCHNWIKMVSKLLIRVIIVRDRIRFHRFEGGLCSCADYW 542

BLAST of Csa1G666990 vs. TrEMBL
Match: V4TKB4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033814mg PE=4 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 3.9e-180
Identity = 308/531 (58.00%), Postives = 408/531 (76.84%), Query Frame = 1

Query: 10  RRITFALLATSASGLPAAPS--NSKDYQSLYRVLEACRLFHMNSKTVIETHARIIKFGYG 69
           R+   A+ +TS+    + P   + + +++L  VLE+C+  ++  + V +TH RIIK G+ 
Sbjct: 11  RQSPMAIQSTSSRSSLSWPQGLHHEYHRALCGVLESCKC-NLELRVVSQTHTRIIKCGFE 70

Query: 70  NYPTLIASLVSTYQRVGCLNRVHQLLDILCSKQLDLVAMNLLIGNFMKIGECKFAKKVFY 129
            YP+++ASL+S Y+        +++LD +     +LV MN++I N M+IGEC+ AKKVF 
Sbjct: 71  TYPSVVASLMSAYKHCDKFGLANRILDEVSLSDFNLVTMNIIIENCMRIGECEVAKKVFC 130

Query: 130 KMPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSN 189
           KMP +DVV+WNS+IGG V+NAR+DEA RFFR+ML+S ++PD FTFAS++  CA+LGA ++
Sbjct: 131 KMPDKDVVSWNSMIGGFVRNARFDEALRFFREMLSSKVEPDKFTFASVITGCARLGALNH 190

Query: 190 THWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAI 249
            +WVH  + +KKIELN +L+ ALID YSKCG IQ+AKE+F  +  +D SVWN MI G+AI
Sbjct: 191 AYWVHNLIIEKKIELNFILSAALIDMYSKCGKIQMAKEVFDTVQRNDVSVWNAMISGVAI 250

Query: 250 HGLAMDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLE 309
           HGLA DA ++F +ME  +VLPD+ITFLG+LTAC+H  L++ G +YF+ M+S YSIQPQLE
Sbjct: 251 HGLAADASAIFTKMEMFNVLPDSITFLGLLTACSHCGLVEEGCKYFDHMRSRYSIQPQLE 310

Query: 310 HYGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSQR 369
           HYG MVDL  RAG +EEAY LI +M +EPDVV WR LLS CR +K  +L EVAIAN+S+ 
Sbjct: 311 HYGAMVDLLGRAGHIEEAYGLITSMTMEPDVVVWRALLSACRTFKRLELGEVAIANISRL 370

Query: 370 KSGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPE 429
             GDYVLLSN+YC L RW  AE VR++MK   VRK +GKSW+EL G I  FK+GDR HPE
Sbjct: 371 MGGDYVLLSNMYCYLQRWDTAENVREIMKKKGVRKSQGKSWLELAGVIHQFKAGDRSHPE 430

Query: 430 SDAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGA 489
           ++AI+K+L SL++RT++EG++P TELV MD+SEEEKE NL  HSEK+ALAY ILKTSPG 
Sbjct: 431 AEAIDKILGSLIQRTKSEGFLPATELVLMDVSEEEKEGNLYHHSEKLALAYGILKTSPGT 490

Query: 490 KISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 539
           +I ISKNLRIC DCH+WIK++SR+L RVI+VRDRIRFH+FEGG+CSCGD W
Sbjct: 491 EIRISKNLRICHDCHSWIKMISRLLRRVIIVRDRIRFHRFEGGLCSCGDYW 540

BLAST of Csa1G666990 vs. TAIR10
Match: AT5G50990.1 (AT5G50990.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 547.7 bits (1410), Expect = 7.8e-156
Identity = 272/530 (51.32%), Postives = 372/530 (70.19%), Query Frame = 1

Query: 10  RRITFALLATSASGLPAAPSNSKDYQSLYRVLEACRLFHMNSKTVIETHARIIKFGYGNY 69
           RR     L++S++      SN  D+  L +VLE+C+    NSK V++ HA+I K GYG Y
Sbjct: 12  RRFCITSLSSSSA------SNLTDHGMLKQVLESCKA-PSNSKCVLQAHAQIFKLGYGTY 71

Query: 70  PTLIASLVSTYQRVGCLNRVHQLLDILCSKQLDLVAMNLLIGNFMKIGECKFAKKVFYKM 129
           P+L+ S V+ Y+R        +LL    S    +  +NL+I + MKIGE   AKKV    
Sbjct: 72  PSLLVSTVAAYRRCNRSYLARRLLLWFLSLSPGVCNINLIIESLMKIGESGLAKKVLRNA 131

Query: 130 PFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLT-SNIQPDGFTFASILNACAQLGAPSNT 189
             ++V+TWN +IGG V+N +Y+EA +  + ML+ ++I+P+ F+FAS L ACA+LG   + 
Sbjct: 132 SDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHA 191

Query: 190 HWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIH 249
            WVH+ M    IELN++L+ AL+D Y+KCG I  ++E+F ++  +D S+WN MI G A H
Sbjct: 192 KWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATH 251

Query: 250 GLAMDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEH 309
           GLA +A+ +F  ME E V PD+ITFLG+LT C+H  L++ G+ YF LM   +SIQP+LEH
Sbjct: 252 GLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEH 311

Query: 310 YGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSQRK 369
           YG MVDL  RAG ++EAY LI +MPIEPDVV WR+LLS  R YKN +L E+AI N+S+ K
Sbjct: 312 YGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKAK 371

Query: 370 SGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPES 429
           SGDYVLLSNIY S  +W+ A+ VR++M    +RK +GKSW+E GG I  FK+GD  H E+
Sbjct: 372 SGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIET 431

Query: 430 DAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAK 489
            AI KVL  L+++T+++G++  T+LV MD+SEEEKEENL++HSEK+ALAY ILK+SPG +
Sbjct: 432 KAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTE 491

Query: 490 ISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 539
           I I KN+R+C DCH WIK VS++L RVI++RDRIRFH+FE G+CSC D W
Sbjct: 492 IRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCRDYW 534

BLAST of Csa1G666990 vs. TAIR10
Match: AT5G48910.1 (AT5G48910.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 380.2 bits (975), Expect = 2.1e-105
Identity = 195/498 (39.16%), Postives = 291/498 (58.43%), Query Frame = 1

Query: 56  ETHARIIKFGYGNYPTLIASLVSTYQRVGCL---------NRVHQLLDILCSKQL---DL 115
           + H   +K+G+G    ++++LV  Y   G +         N + + + ++  ++    ++
Sbjct: 149 QIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEI 208

Query: 116 VAMNLLIGNFMKIGECKFAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTS 175
           V  N++I  +M++G+CK A+ +F KM  R VV+WN++I G   N  + +A   FR+M   
Sbjct: 209 VLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKG 268

Query: 176 NIQPDGFTFASILNACAQLGAPSNTHWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIA 235
           +I+P+  T  S+L A ++LG+     W+H       I ++ +L  ALID YSKCG I+ A
Sbjct: 269 DIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKA 328

Query: 236 KEIFSNIPHSDTSVWNVMIKGLAIHGLAMDALSLFLRMEHESVLPDAITFLGVLTACNHG 295
             +F  +P  +   W+ MI G AIHG A DA+  F +M    V P  + ++ +LTAC+HG
Sbjct: 329 IHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHG 388

Query: 296 CLIDHGRRYFELMKSHYSIQPQLEHYGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRT 355
            L++ GRRYF  M S   ++P++EHYG MVDL  R+G L+EA   I+ MPI+PD V W+ 
Sbjct: 389 GLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKA 448

Query: 356 LLSGCRIYKNHKLAE-VA--IANMSQRKSGDYVLLSNIYCSLNRWKEAETVRKMMKINRV 415
           LL  CR+  N ++ + VA  + +M    SG YV LSN+Y S   W E   +R  MK   +
Sbjct: 449 LLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDI 508

Query: 416 RKKRGKSWIELGGTIQHFKSGDRLHPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDISE 475
           RK  G S I++ G +  F   D  HP++  I  +L  +  + R  GY P+T  V +++ E
Sbjct: 509 RKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEE 568

Query: 476 EEKEENLSFHSEKMALAYAILKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRD 535
           E+KE  L +HSEK+A A+ ++ TSPG  I I KNLRIC+DCH+ IKL+S+V  R I VRD
Sbjct: 569 EDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRD 628

Query: 536 RIRFHQFEGGMCSCGDRW 539
           R RFH F+ G CSC D W
Sbjct: 629 RKRFHHFQDGSCSCMDYW 646


HSP 2 Score: 64.7 bits (156), Expect = 2.0e-10
Identity = 49/165 (29.70%), Postives = 73/165 (44.24%), Query Frame = 1

Query: 121 FAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAF----RFFRQMLTSNIQPDGFTFASIL 180
           +A K+F +MP R+  +WN+II G  ++   D+A      F+  M    ++P+ FTF S+L
Sbjct: 77  YAHKIFNQMPQRNCFSWNTIIRGFSESDE-DKALIAITLFYEMMSDEFVEPNRFTFPSVL 136

Query: 181 NACAQLGAPSNTHWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIF-SNIPHSDT 240
            ACA+ G       +H    +     +  +   L+  Y  CG ++ A+ +F  NI   D 
Sbjct: 137 KACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDM 196

Query: 241 SV-------------WNVMIKGLAIHGLAMDALSLFLRMEHESVL 268
            V             WNVMI G    G    A  LF +M   SV+
Sbjct: 197 VVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVV 240

BLAST of Csa1G666990 vs. TAIR10
Match: AT3G62890.1 (AT3G62890.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 378.6 bits (971), Expect = 6.3e-105
Identity = 197/492 (40.04%), Postives = 301/492 (61.18%), Query Frame = 1

Query: 57  THARIIKFGYGNYPTLIASLVSTYQRVGCLNRVHQLLDILCSKQLDLVAMNLLIGNFMKI 116
           THA+I+ FG    P +  SL++ Y   G L    ++ D   SK  DL A N ++  + K 
Sbjct: 84  THAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSK--DLPAWNSVVNAYAKA 143

Query: 117 GECKFAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSN-----IQPDGFT 176
           G    A+K+F +MP R+V++W+ +I G V   +Y EA   FR+M         ++P+ FT
Sbjct: 144 GLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFT 203

Query: 177 FASILNACAQLGAPSNTHWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNI- 236
            +++L+AC +LGA     WVHA + +  +E++ +L  ALID Y+KCGS++ AK +F+ + 
Sbjct: 204 MSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALG 263

Query: 237 PHSDTSVWNVMIKGLAIHGLAMDALSLFLRME-HESVLPDAITFLGVLTACNHGCLIDHG 296
              D   ++ MI  LA++GL  +   LF  M   +++ P+++TF+G+L AC H  LI+ G
Sbjct: 264 SKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEG 323

Query: 297 RRYFELMKSHYSIQPQLEHYGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCR 356
           + YF++M   + I P ++HYG MVDLY R+G ++EA S I +MP+EPDV+ W +LLSG R
Sbjct: 324 KSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSR 383

Query: 357 IYKNHKLAEVAIANMSQ---RKSGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGK 416
           +  + K  E A+  + +     SG YVLLSN+Y    RW E + +R  M++  + K  G 
Sbjct: 384 MLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGC 443

Query: 417 SWIELGGTIQHFKSGDRLHPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEEN 476
           S++E+ G +  F  GD    ES+ I  +L  +M+R R  GY+  T+ V +D++E++KE  
Sbjct: 444 SYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIA 503

Query: 477 LSFHSEKMALAYAILKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQ 536
           LS+HSEK+A+A+ ++KT PG  + I KNLRIC DCH  +K++S++  R IVVRD  RFH 
Sbjct: 504 LSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHH 563

Query: 537 FEGGMCSCGDRW 539
           F  G CSC D W
Sbjct: 564 FRDGSCSCRDFW 573

BLAST of Csa1G666990 vs. TAIR10
Match: AT4G21065.1 (AT4G21065.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 377.9 bits (969), Expect = 1.1e-104
Identity = 197/474 (41.56%), Postives = 289/474 (60.97%), Query Frame = 1

Query: 69  YPTLIASLVSTYQRVGCLNRVHQLLDILCSKQLDLVAMNLLIGNFMKIGECKFAKKVFYK 128
           YP LI + V+T   V     +H ++ I       +   N L+  +   G+   A KVF K
Sbjct: 124 YPFLIKA-VTTMADVRLGETIHSVV-IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDK 183

Query: 129 MPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNT 188
           MP +D+V WNS+I G  +N + +EA   + +M +  I+PDGFT  S+L+ACA++GA +  
Sbjct: 184 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 243

Query: 189 HWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIH 248
             VH  M +  +  N   +  L+D Y++CG ++ AK +F  +   ++  W  +I GLA++
Sbjct: 244 KRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 303

Query: 249 GLAMDALSLFLRMEH-ESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLE 308
           G   +A+ LF  ME  E +LP  ITF+G+L AC+H  ++  G  YF  M+  Y I+P++E
Sbjct: 304 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIE 363

Query: 309 HYGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVA---IANM 368
           H+G MVDL +RAG +++AY  I +MP++P+VV WRTLL  C ++ +  LAE A   I  +
Sbjct: 364 HFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQL 423

Query: 369 SQRKSGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRL 428
               SGDYVLLSN+Y S  RW + + +RK M  + V+K  G S +E+G  +  F  GD+ 
Sbjct: 424 EPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKS 483

Query: 429 HPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTS 488
           HP+SDAI   L  +  R R+EGY+P    V++D+ EEEKE  + +HSEK+A+A+ ++ T 
Sbjct: 484 HPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTP 543

Query: 489 PGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 539
             + I++ KNLR+C DCH  IKLVS+V  R IVVRDR RFH F+ G CSC D W
Sbjct: 544 ERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595


HSP 2 Score: 100.9 bits (250), Expect = 2.5e-21
Identity = 63/232 (27.16%), Postives = 112/232 (48.28%), Query Frame = 1

Query: 121 FAKKVFYKMPFR-DVVTWNSIIGGCVKNARYDEAFRFFRQMLTSN-IQPDGFTFASILNA 180
           +A KVF K+    +V  WN++I G  +      AF  +R+M  S  ++PD  T+  ++ A
Sbjct: 71  YAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKA 130

Query: 181 CAQLGAPSNTHWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVW 240
              +        +H+ + +        +  +L+  Y+ CG +  A ++F  +P  D   W
Sbjct: 131 VTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAW 190

Query: 241 NVMIKGLAIHGLAMDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKS 300
           N +I G A +G   +AL+L+  M  + + PD  T + +L+AC     +  G+R    M  
Sbjct: 191 NSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM-I 250

Query: 301 HYSIQPQLEHYGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRI 351
              +   L    V++DLY+R G +EEA +L   M ++ + V+W +L+ G  +
Sbjct: 251 KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAV 300

BLAST of Csa1G666990 vs. TAIR10
Match: AT5G66520.1 (AT5G66520.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 376.7 bits (966), Expect = 2.4e-104
Identity = 198/518 (38.22%), Postives = 299/518 (57.72%), Query Frame = 1

Query: 26  AAPSNSKDYQSLYRVLEACRLFHMNSKTVIETHARIIKFGYGNYPTLIASLVSTYQRVGC 85
           +AP N+  + SL   L+AC       +T  + HA+I K GY N    + SL+++Y   G 
Sbjct: 110 SAPHNAYTFPSL---LKACSNLSAFEETT-QIHAQITKLGYENDVYAVNSLINSYAVTGN 169

Query: 86  LNRVHQLLDILCSKQLDLVAMNLLIGNFMKIGECKFAKKVFYKMPFRDVVTWNSIIGGCV 145
               H L D +   + D V+ N +I  ++K G+   A  +F KM  ++ ++W ++I G V
Sbjct: 170 FKLAHLLFDRI--PEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYV 229

Query: 146 KNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNTHWVHAQMTQKKIELNSL 205
           +     EA + F +M  S+++PD  + A+ L+ACAQLGA     W+H+ + + +I ++S+
Sbjct: 230 QADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSV 289

Query: 206 LTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIHGLAMDALSLFLRMEHES 265
           L C LID Y+KCG ++ A E+F NI       W  +I G A HG   +A+S F+ M+   
Sbjct: 290 LGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMG 349

Query: 266 VLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEHYGVMVDLYSRAGFLEEA 325
           + P+ ITF  VLTAC++  L++ G+  F  M+  Y+++P +EHYG +VDL  RAG L+EA
Sbjct: 350 IKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEA 409

Query: 326 YSLIVTMPIEPDVVTWRTLLSGCRIYKN----HKLAEVAIANMSQRKSGDYVLLSNIYCS 385
              I  MP++P+ V W  LL  CRI+KN     ++ E+ IA +     G YV  +NI+  
Sbjct: 410 KRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIA-IDPYHGGRYVHKANIHAM 469

Query: 386 LNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPESDAIEKVLCSLMKR 445
             +W +A   R++MK   V K  G S I L GT   F +GDR HPE + I+     + ++
Sbjct: 470 DKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRK 529

Query: 446 TRTEGYMPVTELVFMD-ISEEEKEENLSFHSEKMALAYAILKTSPGAKISISKNLRICDD 505
               GY+P  E + +D + ++E+E  +  HSEK+A+ Y ++KT PG  I I KNLR+C D
Sbjct: 530 LEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKD 589

Query: 506 CHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 539
           CH   KL+S++  R IV+RDR RFH F  G CSCGD W
Sbjct: 590 CHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620


HSP 2 Score: 78.2 bits (191), Expect = 1.7e-14
Identity = 45/147 (30.61%), Postives = 76/147 (51.70%), Query Frame = 1

Query: 121 FAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACA 180
           +A+ VF      D   WN +I G   +   + +   +++ML S+   + +TF S+L AC+
Sbjct: 67  YAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACS 126

Query: 181 QLGAPSNTHWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNV 240
            L A   T  +HAQ+T+   E +     +LI++Y+  G+ ++A  +F  IP  D   WN 
Sbjct: 127 NLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNS 186

Query: 241 MIKGLAIHGLAMDALSLFLRMEHESVL 268
           +IKG    G    AL+LF +M  ++ +
Sbjct: 187 VIKGYVKAGKMDIALTLFRKMAEKNAI 213

BLAST of Csa1G666990 vs. NCBI nr
Match: gi|659086109|ref|XP_008443769.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g50990 isoform X1 [Cucumis melo])

HSP 1 Score: 1038.1 bits (2683), Expect = 5.4e-300
Identity = 511/538 (94.98%), Postives = 525/538 (97.58%), Query Frame = 1

Query: 1   MLKQRYLDCRRITFALLATSASGLPAAPSNSKDYQSLYRVLEACRLFHMNSKTVIETHAR 60
           MLKQRYLDCRRIT ALLATSAS LPAAPSN  DYQ+L+RVLEACRLF MNSKTVIETHAR
Sbjct: 1   MLKQRYLDCRRITCALLATSASALPAAPSNFTDYQTLHRVLEACRLFPMNSKTVIETHAR 60

Query: 61  IIKFGYGNYPTLIASLVSTYQRVGCLNRVHQLLDILCSKQLDLVAMNLLIGNFMKIGECK 120
           IIKFGYGNYPTLIASLVSTYQ VGCLNRVH+LLDILCSK LDLVAMNLLIGNFMKIGECK
Sbjct: 61  IIKFGYGNYPTLIASLVSTYQYVGCLNRVHRLLDILCSKHLDLVAMNLLIGNFMKIGECK 120

Query: 121 FAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACA 180
           FAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFAS+LNACA
Sbjct: 121 FAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASLLNACA 180

Query: 181 QLGAPSNTHWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNV 240
           QLGAPSNTHWV AQMTQKKIELNSLL+CALIDAYSKCGSIQIAKEIFSN+PHSDTSVWNV
Sbjct: 181 QLGAPSNTHWVRAQMTQKKIELNSLLSCALIDAYSKCGSIQIAKEIFSNVPHSDTSVWNV 240

Query: 241 MIKGLAIHGLAMDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHY 300
           MIKGLAIHGLAMDALSLFLRMEHE+VLPDAITFLG+LTACNHG LIDHGRRYFELM+S Y
Sbjct: 241 MIKGLAIHGLAMDALSLFLRMEHENVLPDAITFLGILTACNHGGLIDHGRRYFELMRSRY 300

Query: 301 SIQPQLEHYGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVA 360
           SIQPQLEHYGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGC+IYKNHKLAEVA
Sbjct: 301 SIQPQLEHYGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCKIYKNHKLAEVA 360

Query: 361 IANMSQRKSGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKS 420
           IANMS  KSGDYVLLSNIYCSLNRW+EAETVRKMMKINRVRKKRGKSWIELGGT Q+FKS
Sbjct: 361 IANMSHCKSGDYVLLSNIYCSLNRWEEAETVRKMMKINRVRKKRGKSWIELGGTTQYFKS 420

Query: 421 GDRLHPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAI 480
           GDRLHPESDAI+KVLCSLMKRTR+EGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAI
Sbjct: 421 GDRLHPESDAIDKVLCSLMKRTRSEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAI 480

Query: 481 LKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 539
           LKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW
Sbjct: 481 LKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 538

BLAST of Csa1G666990 vs. NCBI nr
Match: gi|659086117|ref|XP_008443773.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g50990 isoform X2 [Cucumis melo])

HSP 1 Score: 795.4 bits (2053), Expect = 6.1e-227
Identity = 388/409 (94.87%), Postives = 399/409 (97.56%), Query Frame = 1

Query: 130 PFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNTH 189
           P    VTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFAS+LNACAQLGAPSNTH
Sbjct: 28  PSNFTVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASLLNACAQLGAPSNTH 87

Query: 190 WVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIHG 249
           WV AQMTQKKIELNSLL+CALIDAYSKCGSIQIAKEIFSN+PHSDTSVWNVMIKGLAIHG
Sbjct: 88  WVRAQMTQKKIELNSLLSCALIDAYSKCGSIQIAKEIFSNVPHSDTSVWNVMIKGLAIHG 147

Query: 250 LAMDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEHY 309
           LAMDALSLFLRMEHE+VLPDAITFLG+LTACNHG LIDHGRRYFELM+S YSIQPQLEHY
Sbjct: 148 LAMDALSLFLRMEHENVLPDAITFLGILTACNHGGLIDHGRRYFELMRSRYSIQPQLEHY 207

Query: 310 GVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSQRKS 369
           GVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGC+IYKNHKLAEVAIANMS  KS
Sbjct: 208 GVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCKIYKNHKLAEVAIANMSHCKS 267

Query: 370 GDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPESD 429
           GDYVLLSNIYCSLNRW+EAETVRKMMKINRVRKKRGKSWIELGGT Q+FKSGDRLHPESD
Sbjct: 268 GDYVLLSNIYCSLNRWEEAETVRKMMKINRVRKKRGKSWIELGGTTQYFKSGDRLHPESD 327

Query: 430 AIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAKI 489
           AI+KVLCSLMKRTR+EGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAKI
Sbjct: 328 AIDKVLCSLMKRTRSEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAKI 387

Query: 490 SISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 539
           SISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW
Sbjct: 388 SISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 436

BLAST of Csa1G666990 vs. NCBI nr
Match: gi|659086117|ref|XP_008443773.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g50990 isoform X2 [Cucumis melo])

HSP 1 Score: 105.5 bits (262), Expect = 2.9e-19
Identity = 79/260 (30.38%), Postives = 120/260 (46.15%), Query Frame = 1

Query: 1   MLKQRYLDCRRITFALLATSASGLPAAPSN-SKDYQSLY-------RVLEACRLFHMNSK 60
           MLKQRYLDCRRIT ALLATSAS LPAAPSN +  + S+        R  EA R F     
Sbjct: 1   MLKQRYLDCRRITCALLATSASALPAAPSNFTVTWNSIIGGCVKNARYDEAFRFFRQMLT 60

Query: 61  TVIETHARIIKFGYGNYPTLIASLVSTYQRVGCLNRVHQLLDILCSKQLDLVAM--NLLI 120
           + I+                 ASL++   ++G  +  H +   +  K+++L ++    LI
Sbjct: 61  SNIQPDG-----------FTFASLLNACAQLGAPSNTHWVRAQMTQKKIELNSLLSCALI 120

Query: 121 GNFMKIGECKFAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGF 180
             + K G  + AK++F  +P  D   WN +I G   +    +A   F +M   N+ PD  
Sbjct: 121 DAYSKCGSIQIAKEIFSNVPHSDTSVWNVMIKGLAIHGLAMDALSLFLRMEHENVLPDAI 180

Query: 181 TFASILNACAQLG-APSNTHWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSN 240
           TF  IL AC   G       +     ++  I+        ++D YS+ G ++ A  +   
Sbjct: 181 TFLGILTACNHGGLIDHGRRYFELMRSRYSIQPQLEHYGVMVDLYSRAGFLEEAYSLIVT 240

Query: 241 IP-HSDTSVWNVMIKGLAIH 249
           +P   D   W  ++ G  I+
Sbjct: 241 MPIEPDVVTWRTLLSGCKIY 249


HSP 2 Score: 672.2 bits (1733), Expect = 7.8e-190
Identity = 320/523 (61.19%), Postives = 408/523 (78.01%), Query Frame = 1

Query: 17  LATSASGLPAAPSNS-KDYQSLYRVLEACRLFHMNSKTVIETHARIIKFGYGNYPTLIAS 76
           L    + L ++PS++  D+Q L  +LEAC+ F  + +T  ++HA+IIKFGYG YP+LI S
Sbjct: 29  LVHPTNSLNSSPSSTIPDHQKLNCILEACK-FSSDFRTAFQSHAKIIKFGYGTYPSLITS 88

Query: 77  LVSTYQRVGCLNRVHQLLDILCSKQLDLVAMNLLIGNFMKIGECKFAKKVFYKMPFRDVV 136
           LVSTY    CL+  HQLLD +     DL+  NL+I + MK+GE  FAK+VF KM  RDVV
Sbjct: 89  LVSTYAHCDCLDLAHQLLDEMPYWGFDLITANLIIASLMKVGEFDFAKRVFRKMLRRDVV 148

Query: 137 TWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNTHWVHAQM 196
           TWNS+IGGCV+N R++EA RFFR+ML SN++PDGFTFAS++N CA+LG+  +   VH  M
Sbjct: 149 TWNSMIGGCVRNERFEEALRFFREMLNSNVEPDGFTFASVINGCARLGSSHHAELVHGLM 208

Query: 197 TQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIHGLAMDAL 256
            +KKI+LN +L+ ALID YSKCG I  AK++F++I H D SVWN MI GLAIHGLA+DA+
Sbjct: 209 IEKKIQLNFILSSALIDLYSKCGRINTAKKVFNSIQHDDVSVWNSMINGLAIHGLALDAI 268

Query: 257 SLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEHYGVMVDL 316
            +F +ME ESV PD+ITF+G+LTAC+H  L++ GRRYF+LM+ HYSIQPQLEHYG MVDL
Sbjct: 269 GVFSQMEMESVSPDSITFIGILTACSHCGLVEQGRRYFDLMRRHYSIQPQLEHYGAMVDL 328

Query: 317 YSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSQRKSGDYVLL 376
             RAG +EEAY++I  MP+EPD+V WR LLS CR +KN +L EVAIA +S   SGDY+LL
Sbjct: 329 LGRAGLVEEAYAMIKAMPMEPDIVIWRALLSACRNFKNPELGEVAIAKISHLNSGDYILL 388

Query: 377 SNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPESDAIEKVL 436
           SN+YCSL +W  AE VR+MMK + VRK RG+SW+ELGG I  FK+GDR HPE+ AI KVL
Sbjct: 389 SNMYCSLEKWDSAERVREMMKRDGVRKNRGRSWVELGGVIHQFKAGDRSHPETGAIYKVL 448

Query: 437 CSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAKISISKNL 496
             L++RT+ EG+MP T+LV MD+S+EE+EENL+ HSEK+ALAY ILKTSPG +I +SKNL
Sbjct: 449 EGLIRRTKLEGFMPATDLVLMDVSDEEREENLNSHSEKLALAYVILKTSPGTEIRVSKNL 508

Query: 497 RICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 539
           R C DCH W+K++SR+L RVI+VRDRIRFHQFEGG+CSC D W
Sbjct: 509 RTCHDCHCWMKILSRLLSRVIIVRDRIRFHQFEGGLCSCRDYW 550

BLAST of Csa1G666990 vs. NCBI nr
Match: gi|147860852|emb|CAN83162.1| (hypothetical protein VITISV_022557 [Vitis vinifera])

HSP 1 Score: 671.0 bits (1730), Expect = 1.7e-189
Identity = 318/517 (61.51%), Postives = 402/517 (77.76%), Query Frame = 1

Query: 22  SGLPAAPSNSKDYQSLYRVLEACRLFHMNSKTVIETHARIIKFGYGNYPTLIASLVSTYQ 81
           SG        +D+Q L  +LEAC+ F  + +T  ++HA+IIKFGYG YP+LI SLVSTY 
Sbjct: 47  SGTTDMVIQERDHQKLNCILEACK-FSSDFRTAFQSHAKIIKFGYGTYPSLITSLVSTYA 106

Query: 82  RVGCLNRVHQLLDILCSKQLDLVAMNLLIGNFMKIGECKFAKKVFYKMPFRDVVTWNSII 141
              CL+  HQLLD +     DL+  NL+I + MK+GE  FAK+VF KM  RDVVTWNS+I
Sbjct: 107 HCDCLDLAHQLLDEMPYWGFDLITANLIIASLMKVGEFDFAKRVFRKMLRRDVVTWNSMI 166

Query: 142 GGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNTHWVHAQMTQKKIE 201
           GGCV+N R++EA RFFR+ML SN++PDGFTFAS++N CA+LG+  +   VH  M +KKI+
Sbjct: 167 GGCVRNERFEEALRFFREMLNSNVEPDGFTFASVINGCARLGSSHHAELVHGLMIEKKIQ 226

Query: 202 LNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIHGLAMDALSLFLRM 261
           LN +L+ ALID YSKCG I  AK++F++I H D SVWN MI GLAIHGLA+DA+ +F +M
Sbjct: 227 LNFILSSALIDLYSKCGRINTAKKVFNSIQHDDVSVWNSMINGLAIHGLALDAIGVFSQM 286

Query: 262 EHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEHYGVMVDLYSRAGF 321
           E ESV PD+ITF+G+LTAC+H  L++ GRRYF+LM+ HYSIQPQLEHYG MVDL  RAG 
Sbjct: 287 EMESVSPDSITFIGILTACSHCGLVEQGRRYFDLMRRHYSIQPQLEHYGAMVDLLGRAGL 346

Query: 322 LEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSQRKSGDYVLLSNIYCS 381
           +EEAY++I  MP+EPD+V WR LLS CR +KN +L EVAIA +S   SGDY+LLSN+YCS
Sbjct: 347 VEEAYAMIKAMPMEPDIVIWRALLSACRNFKNPELGEVAIAKISHLNSGDYILLSNMYCS 406

Query: 382 LNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPESDAIEKVLCSLMKR 441
           L +W  AE VR+MMK + VRK RG+SW+ELGG I  FK+GDR HPE+ AI KVL  L++R
Sbjct: 407 LEKWDSAERVREMMKRDGVRKNRGRSWVELGGVIHQFKAGDRSHPETGAIYKVLEGLIRR 466

Query: 442 TRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAKISISKNLRICDDC 501
           T+ EG+MP T+LV MD+S+EE+EENL+ HSEK+ALAY ILKTSPG +I +SKNLR C DC
Sbjct: 467 TKLEGFMPATDLVLMDVSDEEREENLNSHSEKLALAYVILKTSPGTEIRVSKNLRTCHDC 526

Query: 502 HTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 539
           H W+K++SR+L RVI+VRDRIRFHQFEGG+CSC D W
Sbjct: 527 HCWMKILSRLLSRVIIVRDRIRFHQFEGGLCSCRDYW 562

BLAST of Csa1G666990 vs. NCBI nr
Match: gi|1000984405|ref|XP_015578137.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g50990 [Ricinus communis])

HSP 1 Score: 661.4 bits (1705), Expect = 1.4e-186
Identity = 318/505 (62.97%), Postives = 398/505 (78.81%), Query Frame = 1

Query: 34  YQSLYRVLEACRLFHMNSKTVIETHARIIKFGYGNYPTLIASLVSTYQRVGCLNRVHQLL 93
           YQ    +LEAC+L  ++ KT IETHARII+FGYG YP+L ASLVSTY +    N   +++
Sbjct: 160 YQLFIHLLEACKL-SLDLKTAIETHARIIRFGYGTYPSLAASLVSTYVKCDHFNLACEVI 219

Query: 94  DILCSKQLDLVAMNLLIGNFMKIGECKFAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEA 153
           + + S  ++LVA+NL+I N M++GEC+ AKKVFYKMP RDVVTWNS+IGG VKNAR++EA
Sbjct: 220 NQVFSWTVNLVALNLVIDNIMRVGECEIAKKVFYKMPARDVVTWNSLIGGYVKNARFEEA 279

Query: 154 FRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNTHWVHAQMTQKKIELNSLLTCALIDA 213
            RFFR ML S+I+PD FTFAS++ ACA+LGA  N  WVH  M QK++ELN +L+ ALID 
Sbjct: 280 LRFFRVMLGSDIEPDKFTFASVITACARLGALDNAQWVHDLMIQKRVELNCILSSALIDM 339

Query: 214 YSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIHGLAMDALSLFLRMEHESVLPDAITF 273
           +SKCG I+ AKE F ++  SD SVWN MI GLA+HGLA+DA+S+FL+ME E+VLPD+ITF
Sbjct: 340 FSKCGRIRTAKETFESVQRSDVSVWNSMINGLAVHGLALDAISVFLKMEVENVLPDSITF 399

Query: 274 LGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEHYGVMVDLYSRAGFLEEAYSLIVTMP 333
           +G+LTAC H  L+  G+ YF+LMK  YSIQPQLEHYG MVDL  RAG L EAY++I  MP
Sbjct: 400 IGILTACGHSGLVKEGQEYFDLMKRRYSIQPQLEHYGAMVDLLGRAGLLAEAYAMIKGMP 459

Query: 334 IEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSQRKSGDYVLLSNIYCSLNRWKEAETVRK 393
           +EPDVV WR LLS CR YK  +L EVAIAN+S  KSGDYVLLS+IYCS  RW  A+ +R+
Sbjct: 460 MEPDVVIWRALLSACRTYKKPELGEVAIANISHLKSGDYVLLSSIYCSQERWDSAQGIRE 519

Query: 394 MMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPESDAIEKVLCSLMKRTRTEGYMPVTEL 453
           MMK N +RK RGKSW E  G I  FK+GDR HPE+++I K+L +L++RT+ EG++P TEL
Sbjct: 520 MMKKNGIRKIRGKSWFEWKGVIHQFKAGDRSHPETESIYKILEALIRRTKLEGFVPTTEL 579

Query: 454 VFMDISEEEKEENLSFHSEKMALAYAILKTSPGAKISISKNLRICDDCHTWIKLVSRVLC 513
           V MD+SEEEKE NL++HSEK+ALA+ I +TSPG +I+ISKNLRIC DCH WIK+VS +L 
Sbjct: 580 VNMDVSEEEKEVNLNYHSEKLALAFGIFRTSPGTEINISKNLRICYDCHNWIKIVSGLLS 639

Query: 514 RVIVVRDRIRFHQFEGGMCSCGDRW 539
           RVI+VRDRIRFH+FE G CSCGD W
Sbjct: 640 RVIIVRDRIRFHRFESGSCSCGDYW 663

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP428_ARATH1.4e-15451.32Pentatricopeptide repeat-containing protein At5g50990 OS=Arabidopsis thaliana GN... [more]
PP425_ARATH3.8e-10439.16Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana GN... [more]
PP295_ARATH1.1e-10340.04Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana GN... [more]
PP330_ARATH1.9e-10341.56Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana GN... [more]
PP449_ARATH4.2e-10338.22Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana GN... [more]
Match NameE-valueIdentityDescription
A5BED5_VITVI1.2e-18961.51Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022557 PE=4 SV=1[more]
A0A0D2PYT6_GOSRA2.1e-18661.35Uncharacterized protein OS=Gossypium raimondii GN=B456_008G210900 PE=4 SV=1[more]
A0A061G6N9_THECC1.9e-18258.85Tetratricopeptide repeat (TPR)-like superfamily protein isoform 2 OS=Theobroma c... [more]
A0A061G016_THECC1.9e-18258.85Tetratricopeptide repeat-like superfamily protein isoform 1 OS=Theobroma cacao G... [more]
V4TKB4_9ROSI3.9e-18058.00Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033814mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G50990.17.8e-15651.32 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G48910.12.1e-10539.16 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G62890.16.3e-10540.04 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT4G21065.11.1e-10441.56 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G66520.12.4e-10438.22 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659086109|ref|XP_008443769.1|5.4e-30094.98PREDICTED: pentatricopeptide repeat-containing protein At5g50990 isoform X1 [Cuc... [more]
gi|659086117|ref|XP_008443773.1|6.1e-22794.87PREDICTED: pentatricopeptide repeat-containing protein At5g50990 isoform X2 [Cuc... [more]
gi|659086117|ref|XP_008443773.1|2.9e-1930.38PREDICTED: pentatricopeptide repeat-containing protein At5g50990 isoform X2 [Cuc... [more]
gi|147860852|emb|CAN83162.1|1.7e-18961.51hypothetical protein VITISV_022557 [Vitis vinifera][more]
gi|1000984405|ref|XP_015578137.1|1.4e-18662.97PREDICTED: pentatricopeptide repeat-containing protein At5g50990 [Ricinus commun... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0015074 DNA integration
cellular_component GO:0005575 cellular_component
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003676 nucleic acid binding
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU092797cucumber EST collection version 3.0transcribed_cluster
CU112985cucumber EST collection version 3.0transcribed_cluster
CU161368cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G666990.1Csa1G666990.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU112985CU112985transcribed_cluster
CU161368CU161368transcribed_cluster
CU092797CU092797transcribed_cluster


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 237..264
score: 5.8E-5coord: 374..397
score: 0.64coord: 209..228
score: 0.56coord: 104..130
score: 0.91coord: 308..332
score: 0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 133..180
score: 2.1
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 135..168
score: 2.9E-9coord: 237..270
score: 1.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 133..167
score: 13.362coord: 269..299
score: 5.623coord: 337..367
score: 5.908coord: 102..132
score: 6.423coord: 168..202
score: 8.133coord: 203..233
score: 6.434coord: 368..402
score: 6.643coord: 234..268
score: 10.249coord: 305..335
score: 6
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 33..409
score: 2.6E
NoneNo IPR availablePANTHERPTHR24015:SF639SUBFAMILY NOT NAMEDcoord: 33..409
score: 2.6E

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G666990MELO3C029622.2Melon (DHL92) v3.6.1cumedB035
Csa1G666990CSPI01G33040Wild cucumber (PI 183967)cpicuB001
Csa1G666990Cucsa.027500Cucumber (Gy14) v1cgycuB555
Csa1G666990CsGy1G031850Cucumber (Gy14) v2cgybcuB002
The following gene(s) are paralogous to this gene:

None