Cucsa.027500 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.027500
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Pentatricopeptide repeat-containing protein
Location	scaffold00378 : 242507 .. 243739 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTTTCCGTGATGTGGTAACATGGAACTCAATCATTGGAGGTTGTGTGAAGAATGCTCGGTATGATGAGGCATTTAGATTCTTTAGACAGATGCTGACGTCAAATATTCAGCCGGATGGATTTACATTTGCTTCCATATTGAATGCATGTGCTCAACTCGGAGCTCCTAGTAACACTCATTGGGTTCATGCTCAGATGACTCAGAAAAAAATTGAGCTTAATTCTTTATTAACTTGTGCACTCATAGACGCATACTCAAAATGTGGTAGCATCCAAATTGCAAAGGAAATATTTAGTAATATTCCTCACAGTGATACTTCCGTTTGGAATGTGATGATCAAAGGGCTTGCGATTCATGGGCTTGCAATGGATGCATTATCGTTATTTTTGAGGATGGAGCATGAGAGTGTTCTGCCTGATGCCATCACCTTTTTGGGTGTTTTAACAGCTTGCAACCATGGTTGTTTAATTGACCATGGTCGTAGATATTTTGAGCTGATGAAAAGTCATTATTCAATTCAGCCGCAGCTTGAGCATTATGGTGTCATGGTTGACCTTTATAGTCGAGCTGGGTTTCTGGAAGAGGCCTATTCTCTAATCGTGACAATGCCGATAGAGCCTGATGTTGTCACGTGGCGGACACTTTTAAGTGGTTGTAGAATTTACAAAAATCATAAACTTGCAGAAGTTGCTATTGCAAATATGTCTCAACGTAAGAGTGGGGATTACGTATTATTATCAAATATATATTGTTCTCTCAACAGATGGAAGGAAGCAGAAACAGTTAGAAAGATGATGAAAATCAATAGAGTTCGTAAGAAACGTGGAAAAAGCTGGATTGAGTTGGGAGGTACCATTCAACACTTCAAGTCAGGTGATCGATTGCATCCAGAAAGCGATGCAATAGAAAAAGTGCTATGCAGTTTGATGAAGAGAACTCGGACGGAGGGATATATGCCTGTGACGGAGTTGGTTTTCATGGATATCTCTGAGGAGGAGAAGGAAGAGAACTTATCATTTCATAGTGAAAAGATGGCATTGGCTTATGCGATCTTGAAAACTAGTCCTGGGGCAAAGATCAGTATTTCAAAGAACCTGCGGATCTGTGATGATTGCCATACATGGATTAAATTAGTTTCAAGAGTGCTGTGTAGAGTTATAGTAGTGAGGGATCGGATCCGGTTTCATCAATTTGAAGGTGGCATGTGTTCTTGTGGTGATCGTTGGTAG

mRNA sequence

ATGCCTTTCCGTGATGTGGTAACATGGAACTCAATCATTGGAGGTTGTGTGAAGAATGCTCGGTATGATGAGGCATTTAGATTCTTTAGACAGATGCTGACGTCAAATATTCAGCCGGATGGATTTACATTTGCTTCCATATTGAATGCATGTGCTCAACTCGGAGCTCCTAGTAACACTCATTGGGTTCATGCTCAGATGACTCAGAAAAAAATTGAGCTTAATTCTTTATTAACTTGTGCACTCATAGACGCATACTCAAAATGTGGTAGCATCCAAATTGCAAAGGAAATATTTAGTAATATTCCTCACAGTGATACTTCCGTTTGGAATGTGATGATCAAAGGGCTTGCGATTCATGGGCTTGCAATGGATGCATTATCGTTATTTTTGAGGATGGAGCATGAGAGTGTTCTGCCTGATGCCATCACCTTTTTGGGTGTTTTAACAGCTTGCAACCATGGTTGTTTAATTGACCATGGTCGTAGATATTTTGAGCTGATGAAAAGTCATTATTCAATTCAGCCGCAGCTTGAGCATTATGGTGTCATGGTTGACCTTTATAGTCGAGCTGGGTTTCTGGAAGAGGCCTATTCTCTAATCGTGACAATGCCGATAGAGCCTGATGTTGTCACGTGGCGGACACTTTTAAGTGGTTGTAGAATTTACAAAAATCATAAACTTGCAGAAGTTGCTATTGCAAATATGTCTCAACGTAAGAGTGGGGATTACGTATTATTATCAAATATATATTGTTCTCTCAACAGATGGAAGGAAGCAGAAACAGTTAGAAAGATGATGAAAATCAATAGAGTTCGTAAGAAACGTGGAAAAAGCTGGATTGAGTTGGGAGGTACCATTCAACACTTCAAGTCAGGTGATCGATTGCATCCAGAAAGCGATGCAATAGAAAAAGTGCTATGCAGTTTGATGAAGAGAACTCGGACGGAGGGATATATGCCTGTGACGGAGTTGGTTTTCATGGATATCTCTGAGGAGGAGAAGGAAGAGAACTTATCATTTCATAGTGAAAAGATGGCATTGGCTTATGCGATCTTGAAAACTAGTCCTGGGGCAAAGATCAGTATTTCAAAGAACCTGCGGATCTGTGATGATTGCCATACATGGATTAAATTAGTTTCAAGAGTGCTGTGTAGAGTTATAGTAGTGAGGGATCGGATCCGGTTTCATCAATTTGAAGGTGGCATGTGTTCTTGTGGTGATCGTTGGTAG

Coding sequence (CDS)

ATGCCTTTCCGTGATGTGGTAACATGGAACTCAATCATTGGAGGTTGTGTGAAGAATGCTCGGTATGATGAGGCATTTAGATTCTTTAGACAGATGCTGACGTCAAATATTCAGCCGGATGGATTTACATTTGCTTCCATATTGAATGCATGTGCTCAACTCGGAGCTCCTAGTAACACTCATTGGGTTCATGCTCAGATGACTCAGAAAAAAATTGAGCTTAATTCTTTATTAACTTGTGCACTCATAGACGCATACTCAAAATGTGGTAGCATCCAAATTGCAAAGGAAATATTTAGTAATATTCCTCACAGTGATACTTCCGTTTGGAATGTGATGATCAAAGGGCTTGCGATTCATGGGCTTGCAATGGATGCATTATCGTTATTTTTGAGGATGGAGCATGAGAGTGTTCTGCCTGATGCCATCACCTTTTTGGGTGTTTTAACAGCTTGCAACCATGGTTGTTTAATTGACCATGGTCGTAGATATTTTGAGCTGATGAAAAGTCATTATTCAATTCAGCCGCAGCTTGAGCATTATGGTGTCATGGTTGACCTTTATAGTCGAGCTGGGTTTCTGGAAGAGGCCTATTCTCTAATCGTGACAATGCCGATAGAGCCTGATGTTGTCACGTGGCGGACACTTTTAAGTGGTTGTAGAATTTACAAAAATCATAAACTTGCAGAAGTTGCTATTGCAAATATGTCTCAACGTAAGAGTGGGGATTACGTATTATTATCAAATATATATTGTTCTCTCAACAGATGGAAGGAAGCAGAAACAGTTAGAAAGATGATGAAAATCAATAGAGTTCGTAAGAAACGTGGAAAAAGCTGGATTGAGTTGGGAGGTACCATTCAACACTTCAAGTCAGGTGATCGATTGCATCCAGAAAGCGATGCAATAGAAAAAGTGCTATGCAGTTTGATGAAGAGAACTCGGACGGAGGGATATATGCCTGTGACGGAGTTGGTTTTCATGGATATCTCTGAGGAGGAGAAGGAAGAGAACTTATCATTTCATAGTGAAAAGATGGCATTGGCTTATGCGATCTTGAAAACTAGTCCTGGGGCAAAGATCAGTATTTCAAAGAACCTGCGGATCTGTGATGATTGCCATACATGGATTAAATTAGTTTCAAGAGTGCTGTGTAGAGTTATAGTAGTGAGGGATCGGATCCGGTTTCATCAATTTGAAGGTGGCATGTGTTCTTGTGGTGATCGTTGGTAG

Protein sequence

MPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNTHWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIHGLAMDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEHYGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSQRKSGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW*

Homology

[Close]

BLAST of Cucsa.027500 vs. Swiss-Prot
Match: PP428_ARATH (Pentatricopeptide repeat-containing protein At5g50990 OS=Arabidopsis thaliana GN=PCMP-H59 PE=2 SV=2)

HSP 1 Score: 483.4 bits (1243), Expect = 2.4e-135
Identity = 227/408 (55.64%), Postives = 309/408 (75.74%), Query Frame = 1


Query: 4   RDVVTWNSIIGGCVKNARYDEAFRFFRQMLT-SNIQPDGFTFASILNACAQLGAPSNTHW 63
           ++V+TWN +IGG V+N +Y+EA +  + ML+ ++I+P+ F+FAS L ACA+LG   +  W
Sbjct: 127 QNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKW 186

Query: 64  VHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIHGL 123
           VH+ M    IELN++L+ AL+D Y+KCG I  ++E+F ++  +D S+WN MI G A HGL
Sbjct: 187 VHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGL 246

Query: 124 AMDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEHYG 183
           A +A+ +F  ME E V PD+ITFLG+LT C+H  L++ G+ YF LM   +SIQP+LEHYG
Sbjct: 247 ATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYG 306

Query: 184 VMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSQRKSG 243
            MVDL  RAG ++EAY LI +MPIEPDVV WR+LLS  R YKN +L E+AI N+S+ KSG
Sbjct: 307 AMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKAKSG 366

Query: 244 DYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPESDA 303
           DYVLLSNIY S  +W+ A+ VR++M    +RK +GKSW+E GG I  FK+GD  H E+ A
Sbjct: 367 DYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKA 426

Query: 304 IEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAKIS 363
           I KVL  L+++T+++G++  T+LV MD+SEEEKEENL++HSEK+ALAY ILK+SPG +I 
Sbjct: 427 IYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIR 486

Query: 364 ISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 411
           I KN+R+C DCH WIK VS++L RVI++RDRIRFH+FE G+CSC D W
Sbjct: 487 IQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCRDYW 534

[Close]

BLAST of Cucsa.027500 vs. Swiss-Prot
Match: PP330_ARATH (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 365.9 bits (938), Expect = 5.7e-100
Identity = 180/414 (43.48%), Postives = 265/414 (64.01%), Query Frame = 1


Query: 1   MPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNT 60
           MP +D+V WNS+I G  +N + +EA   + +M +  I+PDGFT  S+L+ACA++GA +  
Sbjct: 182 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 241

Query: 61  HWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIH 120
             VH  M +  +  N   +  L+D Y++CG ++ AK +F  +   ++  W  +I GLA++
Sbjct: 242 KRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 301

Query: 121 GLAMDALSLFLRMEH-ESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLE 180
           G   +A+ LF  ME  E +LP  ITF+G+L AC+H  ++  G  YF  M+  Y I+P++E
Sbjct: 302 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIE 361

Query: 181 HYGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVA---IANM 240
           H+G MVDL +RAG +++AY  I +MP++P+VV WRTLL  C ++ +  LAE A   I  +
Sbjct: 362 HFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQL 421

Query: 241 SQRKSGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRL 300
               SGDYVLLSN+Y S  RW + + +RK M  + V+K  G S +E+G  +  F  GD+ 
Sbjct: 422 EPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKS 481

Query: 301 HPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTS 360
           HP+SDAI   L  +  R R+EGY+P    V++D+ EEEKE  + +HSEK+A+A+ ++ T 
Sbjct: 482 HPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTP 541

Query: 361 PGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 411
             + I++ KNLR+C DCH  IKLVS+V  R IVVRDR RFH F+ G CSC D W
Sbjct: 542 ERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595

HSP 2 Score: 98.2 bits (243), Expect = 2.2e-19
Identity = 58/219 (26.48%), Postives = 107/219 (48.86%), Query Frame = 1


Query: 5   DVVTWNSIIGGCVKNARYDEAFRFFRQMLTSN-IQPDGFTFASILNACAQLGAPSNTHWV 64
           +V  WN++I G  +      AF  +R+M  S  ++PD  T+  ++ A   +        +
Sbjct: 84  NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143

Query: 65  HAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIHGLA 124
           H+ + +        +  +L+  Y+ CG +  A ++F  +P  D   WN +I G A +G  
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203

Query: 125 MDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEHYGV 184
            +AL+L+  M  + + PD  T + +L+AC     +  G+R    M     +   L    V
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM-IKVGLTRNLHSSNV 263

Query: 185 MVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRI 223
           ++DLY+R G +EEA +L   M ++ + V+W +L+ G  +
Sbjct: 264 LLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAV 300

[Close]

BLAST of Cucsa.027500 vs. Swiss-Prot
Match: PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 7.2e-95
Identity = 175/410 (42.68%), Postives = 247/410 (60.24%), Query Frame = 1


Query: 4   RDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNTHWV 63
           R VV+WN++I G   N  + +A   FR+M   +I+P+  T  S+L A ++LG+     W+
Sbjct: 237 RSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWL 296

Query: 64  HAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIHGLA 123
           H       I ++ +L  ALID YSKCG I+ A  +F  +P  +   W+ MI G AIHG A
Sbjct: 297 HLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQA 356

Query: 124 MDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEHYGV 183
            DA+  F +M    V P  + ++ +LTAC+HG L++ GRRYF  M S   ++P++EHYG 
Sbjct: 357 GDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGC 416

Query: 184 MVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAE-VA--IANMSQRK 243
           MVDL  R+G L+EA   I+ MPI+PD V W+ LL  CR+  N ++ + VA  + +M    
Sbjct: 417 MVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHD 476

Query: 244 SGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPES 303
           SG YV LSN+Y S   W E   +R  MK   +RK  G S I++ G +  F   D  HP++
Sbjct: 477 SGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKA 536

Query: 304 DAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAK 363
             I  +L  +  + R  GY P+T  V +++ EE+KE  L +HSEK+A A+ ++ TSPG  
Sbjct: 537 KEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKP 596

Query: 364 ISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 411
           I I KNLRIC+DCH+ IKL+S+V  R I VRDR RFH F+ G CSC D W
Sbjct: 597 IRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646

HSP 2 Score: 57.4 bits (137), Expect = 4.3e-07
Identity = 46/157 (29.30%), Postives = 69/157 (43.95%), Query Frame = 1


Query: 1   MPFRDVVTWNSIIGGCVKNARYDEAF----RFFRQMLTSNIQPDGFTFASILNACAQLGA 60
           MP R+  +WN+II G  ++   D+A      F+  M    ++P+ FTF S+L ACA+ G 
Sbjct: 85  MPQRNCFSWNTIIRGFSESDE-DKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGK 144

Query: 61  PSNTHWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIF-SNIPHSDTSV------ 120
                 +H    +     +  +   L+  Y  CG ++ A+ +F  NI   D  V      
Sbjct: 145 IQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRK 204

Query: 121 -------WNVMIKGLAIHGLAMDALSLFLRMEHESVL 140
                  WNVMI G    G    A  LF +M   SV+
Sbjct: 205 RDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVV 240

[Close]

BLAST of Cucsa.027500 vs. Swiss-Prot
Match: PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 1.2e-94
Identity = 175/410 (42.68%), Postives = 243/410 (59.27%), Query Frame = 1


Query: 4   RDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNTHWV 63
           RD ++WNS++ G V+N RY+EA R FRQM+T+ ++P    F+S++ ACA L        +
Sbjct: 306 RDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL 365

Query: 64  HAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIHGLA 123
           H  + +     N  +  AL+D YSKCG+I+ A++IF  +   D   W  +I G A+HG  
Sbjct: 366 HGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHG 425

Query: 124 MDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEHYGV 183
            +A+SLF  M+ + V P+ + F+ VLTAC+H  L+D    YF  M   Y +  +LEHY  
Sbjct: 426 HEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAA 485

Query: 184 MVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVA---IANMSQRK 243
           + DL  RAG LEEAY+ I  M +EP    W TLLS C ++KN +LAE     I  +    
Sbjct: 486 VADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSEN 545

Query: 244 SGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPES 303
            G YVL+ N+Y S  RWKE   +R  M+   +RKK   SWIE+      F SGDR HP  
Sbjct: 546 MGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSM 605

Query: 304 DAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAK 363
           D I + L ++M++   EGY+  T  V  D+ EE K E L  HSE++A+A+ I+ T PG  
Sbjct: 606 DKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTT 665

Query: 364 ISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 411
           I ++KN+RIC DCH  IK +S++  R I+VRD  RFH F  G CSCGD W
Sbjct: 666 IRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715

HSP 2 Score: 105.5 bits (262), Expect = 1.4e-21
Identity = 61/220 (27.73%), Postives = 118/220 (53.64%), Query Frame = 1


Query: 1   MPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNT 60
           MP +DVV++N+II G  ++  Y++A R  R+M T++++PD FT +S+L   ++       
Sbjct: 202 MPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKG 261

Query: 61  HWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIH 120
             +H  + +K I+ +  +  +L+D Y+K   I+ ++ +FS +   D   WN ++ G   +
Sbjct: 262 KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQN 321

Query: 121 GLAMDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRR-YFELMKSHYSIQPQLE 180
           G   +AL LF +M    V P A+ F  V+ AC H   +  G++ +  +++  +     + 
Sbjct: 322 GRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFG--SNIF 381

Query: 181 HYGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSG 220
               +VD+YS+ G ++ A  +   M +  D V+W  ++ G
Sbjct: 382 IASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMG 418

HSP 3 Score: 32.7 bits (73), Expect = 1.1e+01
Identity = 24/101 (23.76%), Postives = 43/101 (42.57%), Query Frame = 1


Query: 6   VVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNTHWVHA 65
           V+ W S+I      + + +A   F +M  S   PD   F S+L +C  +        VH 
Sbjct: 70  VLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHG 129

Query: 66  QMTQKKIELNSLLTCALIDAYSK---CGSIQIAKEIFSNIP 104
            + +  ++ +     AL++ Y+K    GS      +F  +P
Sbjct: 130 FIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMP 170

[Close]

BLAST of Cucsa.027500 vs. Swiss-Prot
Match: PP295_ARATH (Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 6.1e-94
Identity = 173/420 (41.19%), Postives = 265/420 (63.10%), Query Frame = 1


Query: 1   MPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSN-----IQPDGFTFASILNACAQLG 60
           MP R+V++W+ +I G V   +Y EA   FR+M         ++P+ FT +++L+AC +LG
Sbjct: 154 MPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLG 213

Query: 61  APSNTHWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNI-PHSDTSVWNVMI 120
           A     WVHA + +  +E++ +L  ALID Y+KCGS++ AK +F+ +    D   ++ MI
Sbjct: 214 ALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMI 273

Query: 121 KGLAIHGLAMDALSLFLRME-HESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYS 180
             LA++GL  +   LF  M   +++ P+++TF+G+L AC H  LI+ G+ YF++M   + 
Sbjct: 274 CCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFG 333

Query: 181 IQPQLEHYGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVAI 240
           I P ++HYG MVDLY R+G ++EA S I +MP+EPDV+ W +LLSG R+  + K  E A+
Sbjct: 334 ITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGAL 393

Query: 241 ANMSQ---RKSGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHF 300
             + +     SG YVLLSN+Y    RW E + +R  M++  + K  G S++E+ G +  F
Sbjct: 394 KRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEF 453

Query: 301 KSGDRLHPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAY 360
             GD    ES+ I  +L  +M+R R  GY+  T+ V +D++E++KE  LS+HSEK+A+A+
Sbjct: 454 VVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAF 513

Query: 361 AILKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 411
            ++KT PG  + I KNLRIC DCH  +K++S++  R IVVRD  RFH F  G CSC D W
Sbjct: 514 CLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573

[Close]

BLAST of Cucsa.027500 vs. TrEMBL
Match: A0A0A0LXZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G666990 PE=4 SV=1)

HSP 1 Score: 838.2 bits (2164), Expect = 4.3e-240
Identity = 410/410 (100.00%), Postives = 410/410 (100.00%), Query Frame = 1


Query: 1   MPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNT 60
           MPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNT
Sbjct: 129 MPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNT 188

Query: 61  HWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIH 120
           HWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIH
Sbjct: 189 HWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIH 248

Query: 121 GLAMDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEH 180
           GLAMDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEH
Sbjct: 249 GLAMDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEH 308

Query: 181 YGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSQRK 240
           YGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSQRK
Sbjct: 309 YGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSQRK 368

Query: 241 SGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPES 300
           SGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPES
Sbjct: 369 SGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPES 428

Query: 301 DAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAK 360
           DAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAK
Sbjct: 429 DAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAK 488

Query: 361 ISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 411
           ISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW
Sbjct: 489 ISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 538

[Close]

BLAST of Cucsa.027500 vs. TrEMBL
Match: A0A0D2PYT6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G210900 PE=4 SV=1)

HSP 1 Score: 577.4 bits (1487), Expect = 1.4e-161
Identity = 269/409 (65.77%), Postives = 333/409 (81.42%), Query Frame = 1


Query: 2   PFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNTH 61
           P RDV+TWN +IGG V+NAR++EA  FFR+ML SN++PD FTFAS++  CA+LGA ++  
Sbjct: 131 PVRDVITWNLMIGGYVRNARFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHAL 190

Query: 62  WVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIHG 121
           WVH  MT+K+IELN +L+ ALID YSKCG IQ AKE+F++  HSD SVWN MI GLA HG
Sbjct: 191 WVHRLMTKKEIELNPILSSALIDMYSKCGRIQTAKEVFNSADHSDVSVWNAMINGLAAHG 250

Query: 122 LAMDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEHY 181
           L  DA+++F +ME E++ PD+ITF+G+LTAC+H  L++ GR+YF LM S YSI+PQ+EHY
Sbjct: 251 LPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHY 310

Query: 182 GVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSQRKS 241
           GVMVDL+ RAG LEEAY++I  MP+EPDVV WR LLS CRIY+  KL EVAIANMS+ KS
Sbjct: 311 GVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLKS 370

Query: 242 GDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPESD 301
           GDYVLLSN+YCS+ RW+ AE VR++MK   +RK RG+SWIELGG I  FK+GDR HPE++
Sbjct: 371 GDYVLLSNMYCSMKRWESAELVRELMKKKGIRKIRGRSWIELGGVIHRFKAGDRSHPETE 430

Query: 302 AIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAKI 361
            + KVL  L++RT+ EG++P T+LV MDISEEEKE NL+ HSEK+ALAY ILKTSPG +I
Sbjct: 431 GLYKVLDGLIRRTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREI 490

Query: 362 SISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 411
            ISKNLRIC DCH WIKLVS++L RVI+VRDRIRFHQFEGG CSC D W
Sbjct: 491 MISKNLRICHDCHNWIKLVSKLLIRVIIVRDRIRFHQFEGGSCSCEDYW 539

[Close]

BLAST of Cucsa.027500 vs. TrEMBL
Match: A5BED5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022557 PE=4 SV=1)

HSP 1 Score: 574.7 bits (1480), Expect = 9.0e-161
Identity = 265/407 (65.11%), Postives = 332/407 (81.57%), Query Frame = 1


Query: 4   RDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNTHWV 63
           RDVVTWNS+IGGCV+N R++EA RFFR+ML SN++PDGFTFAS++N CA+LG+  +   V
Sbjct: 156 RDVVTWNSMIGGCVRNERFEEALRFFREMLNSNVEPDGFTFASVINGCARLGSSHHAELV 215

Query: 64  HAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIHGLA 123
           H  M +KKI+LN +L+ ALID YSKCG I  AK++F++I H D SVWN MI GLAIHGLA
Sbjct: 216 HGLMIEKKIQLNFILSSALIDLYSKCGRINTAKKVFNSIQHDDVSVWNSMINGLAIHGLA 275

Query: 124 MDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEHYGV 183
           +DA+ +F +ME ESV PD+ITF+G+LTAC+H  L++ GRRYF+LM+ HYSIQPQLEHYG 
Sbjct: 276 LDAIGVFSQMEMESVSPDSITFIGILTACSHCGLVEQGRRYFDLMRRHYSIQPQLEHYGA 335

Query: 184 MVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSQRKSGD 243
           MVDL  RAG +EEAY++I  MP+EPD+V WR LLS CR +KN +L EVAIA +S   SGD
Sbjct: 336 MVDLLGRAGLVEEAYAMIKAMPMEPDIVIWRALLSACRNFKNPELGEVAIAKISHLNSGD 395

Query: 244 YVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPESDAI 303
           Y+LLSN+YCSL +W  AE VR+MMK + VRK RG+SW+ELGG I  FK+GDR HPE+ AI
Sbjct: 396 YILLSNMYCSLEKWDSAERVREMMKRDGVRKNRGRSWVELGGVIHQFKAGDRSHPETGAI 455

Query: 304 EKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAKISI 363
            KVL  L++RT+ EG+MP T+LV MD+S+EE+EENL+ HSEK+ALAY ILKTSPG +I +
Sbjct: 456 YKVLEGLIRRTKLEGFMPATDLVLMDVSDEEREENLNSHSEKLALAYVILKTSPGTEIRV 515

Query: 364 SKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 411
           SKNLR C DCH W+K++SR+L RVI+VRDRIRFHQFEGG+CSC D W
Sbjct: 516 SKNLRTCHDCHCWMKILSRLLSRVIIVRDRIRFHQFEGGLCSCRDYW 562

[Close]

BLAST of Cucsa.027500 vs. TrEMBL
Match: V4TKB4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033814mg PE=4 SV=1)

HSP 1 Score: 564.3 bits (1453), Expect = 1.2e-157
Identity = 264/410 (64.39%), Postives = 333/410 (81.22%), Query Frame = 1


Query: 1   MPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNT 60
           MP +DVV+WNS+IGG V+NAR+DEA RFFR+ML+S ++PD FTFAS++  CA+LGA ++ 
Sbjct: 131 MPDKDVVSWNSMIGGFVRNARFDEALRFFREMLSSKVEPDKFTFASVITGCARLGALNHA 190

Query: 61  HWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIH 120
           +WVH  + +KKIELN +L+ ALID YSKCG IQ+AKE+F  +  +D SVWN MI G+AIH
Sbjct: 191 YWVHNLIIEKKIELNFILSAALIDMYSKCGKIQMAKEVFDTVQRNDVSVWNAMISGVAIH 250

Query: 121 GLAMDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEH 180
           GLA DA ++F +ME  +VLPD+ITFLG+LTAC+H  L++ G +YF+ M+S YSIQPQLEH
Sbjct: 251 GLAADASAIFTKMEMFNVLPDSITFLGLLTACSHCGLVEEGCKYFDHMRSRYSIQPQLEH 310

Query: 181 YGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSQRK 240
           YG MVDL  RAG +EEAY LI +M +EPDVV WR LLS CR +K  +L EVAIAN+S+  
Sbjct: 311 YGAMVDLLGRAGHIEEAYGLITSMTMEPDVVVWRALLSACRTFKRLELGEVAIANISRLM 370

Query: 241 SGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPES 300
            GDYVLLSN+YC L RW  AE VR++MK   VRK +GKSW+EL G I  FK+GDR HPE+
Sbjct: 371 GGDYVLLSNMYCYLQRWDTAENVREIMKKKGVRKSQGKSWLELAGVIHQFKAGDRSHPEA 430

Query: 301 DAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAK 360
           +AI+K+L SL++RT++EG++P TELV MD+SEEEKE NL  HSEK+ALAY ILKTSPG +
Sbjct: 431 EAIDKILGSLIQRTKSEGFLPATELVLMDVSEEEKEGNLYHHSEKLALAYGILKTSPGTE 490

Query: 361 ISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 411
           I ISKNLRIC DCH+WIK++SR+L RVI+VRDRIRFH+FEGG+CSCGD W
Sbjct: 491 IRISKNLRICHDCHSWIKMISRLLRRVIIVRDRIRFHRFEGGLCSCGDYW 540

[Close]

BLAST of Cucsa.027500 vs. TrEMBL
Match: A0A067EUS7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040371mg PE=4 SV=1)

HSP 1 Score: 564.3 bits (1453), Expect = 1.2e-157
Identity = 264/410 (64.39%), Postives = 332/410 (80.98%), Query Frame = 1


Query: 1   MPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNT 60
           MP +DVV+WNS+IGG V+NAR+DEA RFFR+ML+S ++PD FTFAS++  CA+LGA ++ 
Sbjct: 1   MPDKDVVSWNSMIGGFVRNARFDEALRFFREMLSSKVEPDKFTFASVIYGCARLGALNHA 60

Query: 61  HWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIH 120
           +WVH  + +KKIELN +L+ ALID YSKCG IQ+AKE+F  +  +D SVWN MI G+AIH
Sbjct: 61  YWVHNLIIEKKIELNFILSAALIDMYSKCGKIQMAKEVFDTVQRNDVSVWNAMISGVAIH 120

Query: 121 GLAMDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEH 180
           GLA DA ++F +ME  +VLPD+ITFLG+LTAC+H  L++ GR+YF+ M+S YSIQPQLEH
Sbjct: 121 GLAADASAIFTKMEMFNVLPDSITFLGLLTACSHCGLVEEGRKYFDHMRSRYSIQPQLEH 180

Query: 181 YGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSQRK 240
           YG MVDL  RAG +EEAY LI +M +EPDVV WR LLS CR +K  +L EVAI N+S+  
Sbjct: 181 YGAMVDLLGRAGHIEEAYGLITSMTMEPDVVVWRALLSACRTFKRLELGEVAIVNISRLM 240

Query: 241 SGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPES 300
            GDYVLLSN+YC L RW  AE VR++MK   VRK +GKSW+EL G I  FK+GDR HPE+
Sbjct: 241 GGDYVLLSNMYCYLKRWDTAENVREIMKKKGVRKSQGKSWLELAGVIHQFKAGDRSHPEA 300

Query: 301 DAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAK 360
            AI+K+L SL++RT++EG++P TELV MD+SEEEKE NL  HSEK+ALAY ILKTSPG +
Sbjct: 301 QAIDKILGSLIQRTKSEGFLPATELVLMDVSEEEKEGNLYHHSEKLALAYGILKTSPGTE 360

Query: 361 ISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 411
           I ISKNLRIC DCH+WIK++SR+L RVI+VRDRIRFH+FEGG+CSCGD W
Sbjct: 361 IRISKNLRICHDCHSWIKMISRLLRRVIIVRDRIRFHRFEGGLCSCGDYW 410

[Close]

BLAST of Cucsa.027500 vs. TAIR10
Match: AT5G50990.1 (AT5G50990.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 483.4 bits (1243), Expect = 1.4e-136
Identity = 227/408 (55.64%), Postives = 309/408 (75.74%), Query Frame = 1


Query: 4   RDVVTWNSIIGGCVKNARYDEAFRFFRQMLT-SNIQPDGFTFASILNACAQLGAPSNTHW 63
           ++V+TWN +IGG V+N +Y+EA +  + ML+ ++I+P+ F+FAS L ACA+LG   +  W
Sbjct: 127 QNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKW 186

Query: 64  VHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIHGL 123
           VH+ M    IELN++L+ AL+D Y+KCG I  ++E+F ++  +D S+WN MI G A HGL
Sbjct: 187 VHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGL 246

Query: 124 AMDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEHYG 183
           A +A+ +F  ME E V PD+ITFLG+LT C+H  L++ G+ YF LM   +SIQP+LEHYG
Sbjct: 247 ATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYG 306

Query: 184 VMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSQRKSG 243
            MVDL  RAG ++EAY LI +MPIEPDVV WR+LLS  R YKN +L E+AI N+S+ KSG
Sbjct: 307 AMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKAKSG 366

Query: 244 DYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPESDA 303
           DYVLLSNIY S  +W+ A+ VR++M    +RK +GKSW+E GG I  FK+GD  H E+ A
Sbjct: 367 DYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKA 426

Query: 304 IEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAKIS 363
           I KVL  L+++T+++G++  T+LV MD+SEEEKEENL++HSEK+ALAY ILK+SPG +I 
Sbjct: 427 IYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIR 486

Query: 364 ISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 411
           I KN+R+C DCH WIK VS++L RVI++RDRIRFH+FE G+CSC D W
Sbjct: 487 IQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCRDYW 534

[Close]

BLAST of Cucsa.027500 vs. TAIR10
Match: AT4G21065.1 (AT4G21065.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 365.9 bits (938), Expect = 3.2e-101
Identity = 180/414 (43.48%), Postives = 265/414 (64.01%), Query Frame = 1


Query: 1   MPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNT 60
           MP +D+V WNS+I G  +N + +EA   + +M +  I+PDGFT  S+L+ACA++GA +  
Sbjct: 182 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 241

Query: 61  HWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIH 120
             VH  M +  +  N   +  L+D Y++CG ++ AK +F  +   ++  W  +I GLA++
Sbjct: 242 KRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 301

Query: 121 GLAMDALSLFLRMEH-ESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLE 180
           G   +A+ LF  ME  E +LP  ITF+G+L AC+H  ++  G  YF  M+  Y I+P++E
Sbjct: 302 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIE 361

Query: 181 HYGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVA---IANM 240
           H+G MVDL +RAG +++AY  I +MP++P+VV WRTLL  C ++ +  LAE A   I  +
Sbjct: 362 HFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQL 421

Query: 241 SQRKSGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRL 300
               SGDYVLLSN+Y S  RW + + +RK M  + V+K  G S +E+G  +  F  GD+ 
Sbjct: 422 EPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKS 481

Query: 301 HPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTS 360
           HP+SDAI   L  +  R R+EGY+P    V++D+ EEEKE  + +HSEK+A+A+ ++ T 
Sbjct: 482 HPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTP 541

Query: 361 PGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 411
             + I++ KNLR+C DCH  IKLVS+V  R IVVRDR RFH F+ G CSC D W
Sbjct: 542 ERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595

HSP 2 Score: 98.2 bits (243), Expect = 1.2e-20
Identity = 58/219 (26.48%), Postives = 107/219 (48.86%), Query Frame = 1


Query: 5   DVVTWNSIIGGCVKNARYDEAFRFFRQMLTSN-IQPDGFTFASILNACAQLGAPSNTHWV 64
           +V  WN++I G  +      AF  +R+M  S  ++PD  T+  ++ A   +        +
Sbjct: 84  NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143

Query: 65  HAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIHGLA 124
           H+ + +        +  +L+  Y+ CG +  A ++F  +P  D   WN +I G A +G  
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203

Query: 125 MDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEHYGV 184
            +AL+L+  M  + + PD  T + +L+AC     +  G+R    M     +   L    V
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM-IKVGLTRNLHSSNV 263

Query: 185 MVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRI 223
           ++DLY+R G +EEA +L   M ++ + V+W +L+ G  +
Sbjct: 264 LLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAV 300

[Close]

BLAST of Cucsa.027500 vs. TAIR10
Match: AT5G48910.1 (AT5G48910.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 349.0 bits (894), Expect = 4.0e-96
Identity = 175/410 (42.68%), Postives = 247/410 (60.24%), Query Frame = 1


Query: 4   RDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNTHWV 63
           R VV+WN++I G   N  + +A   FR+M   +I+P+  T  S+L A ++LG+     W+
Sbjct: 237 RSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWL 296

Query: 64  HAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIHGLA 123
           H       I ++ +L  ALID YSKCG I+ A  +F  +P  +   W+ MI G AIHG A
Sbjct: 297 HLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQA 356

Query: 124 MDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEHYGV 183
            DA+  F +M    V P  + ++ +LTAC+HG L++ GRRYF  M S   ++P++EHYG 
Sbjct: 357 GDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGC 416

Query: 184 MVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAE-VA--IANMSQRK 243
           MVDL  R+G L+EA   I+ MPI+PD V W+ LL  CR+  N ++ + VA  + +M    
Sbjct: 417 MVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHD 476

Query: 244 SGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPES 303
           SG YV LSN+Y S   W E   +R  MK   +RK  G S I++ G +  F   D  HP++
Sbjct: 477 SGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKA 536

Query: 304 DAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAK 363
             I  +L  +  + R  GY P+T  V +++ EE+KE  L +HSEK+A A+ ++ TSPG  
Sbjct: 537 KEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKP 596

Query: 364 ISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 411
           I I KNLRIC+DCH+ IKL+S+V  R I VRDR RFH F+ G CSC D W
Sbjct: 597 IRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646

HSP 2 Score: 57.4 bits (137), Expect = 2.4e-08
Identity = 46/157 (29.30%), Postives = 69/157 (43.95%), Query Frame = 1


Query: 1   MPFRDVVTWNSIIGGCVKNARYDEAF----RFFRQMLTSNIQPDGFTFASILNACAQLGA 60
           MP R+  +WN+II G  ++   D+A      F+  M    ++P+ FTF S+L ACA+ G 
Sbjct: 85  MPQRNCFSWNTIIRGFSESDE-DKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGK 144

Query: 61  PSNTHWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIF-SNIPHSDTSV------ 120
                 +H    +     +  +   L+  Y  CG ++ A+ +F  NI   D  V      
Sbjct: 145 IQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRK 204

Query: 121 -------WNVMIKGLAIHGLAMDALSLFLRMEHESVL 140
                  WNVMI G    G    A  LF +M   SV+
Sbjct: 205 RDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVV 240

[Close]

BLAST of Cucsa.027500 vs. TAIR10
Match: AT3G23330.1 (AT3G23330.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 348.2 bits (892), Expect = 6.9e-96
Identity = 175/410 (42.68%), Postives = 243/410 (59.27%), Query Frame = 1


Query: 4   RDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNTHWV 63
           RD ++WNS++ G V+N RY+EA R FRQM+T+ ++P    F+S++ ACA L        +
Sbjct: 306 RDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL 365

Query: 64  HAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIHGLA 123
           H  + +     N  +  AL+D YSKCG+I+ A++IF  +   D   W  +I G A+HG  
Sbjct: 366 HGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHG 425

Query: 124 MDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEHYGV 183
            +A+SLF  M+ + V P+ + F+ VLTAC+H  L+D    YF  M   Y +  +LEHY  
Sbjct: 426 HEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAA 485

Query: 184 MVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVA---IANMSQRK 243
           + DL  RAG LEEAY+ I  M +EP    W TLLS C ++KN +LAE     I  +    
Sbjct: 486 VADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSEN 545

Query: 244 SGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPES 303
            G YVL+ N+Y S  RWKE   +R  M+   +RKK   SWIE+      F SGDR HP  
Sbjct: 546 MGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSM 605

Query: 304 DAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAK 363
           D I + L ++M++   EGY+  T  V  D+ EE K E L  HSE++A+A+ I+ T PG  
Sbjct: 606 DKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTT 665

Query: 364 ISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 411
           I ++KN+RIC DCH  IK +S++  R I+VRD  RFH F  G CSCGD W
Sbjct: 666 IRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715

HSP 2 Score: 105.5 bits (262), Expect = 7.8e-23
Identity = 61/220 (27.73%), Postives = 118/220 (53.64%), Query Frame = 1


Query: 1   MPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNT 60
           MP +DVV++N+II G  ++  Y++A R  R+M T++++PD FT +S+L   ++       
Sbjct: 202 MPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKG 261

Query: 61  HWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIH 120
             +H  + +K I+ +  +  +L+D Y+K   I+ ++ +FS +   D   WN ++ G   +
Sbjct: 262 KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQN 321

Query: 121 GLAMDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRR-YFELMKSHYSIQPQLE 180
           G   +AL LF +M    V P A+ F  V+ AC H   +  G++ +  +++  +     + 
Sbjct: 322 GRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFG--SNIF 381

Query: 181 HYGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSG 220
               +VD+YS+ G ++ A  +   M +  D V+W  ++ G
Sbjct: 382 IASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMG 418

HSP 3 Score: 32.7 bits (73), Expect = 6.4e-01
Identity = 24/101 (23.76%), Postives = 43/101 (42.57%), Query Frame = 1


Query: 6   VVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNTHWVHA 65
           V+ W S+I      + + +A   F +M  S   PD   F S+L +C  +        VH 
Sbjct: 70  VLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHG 129

Query: 66  QMTQKKIELNSLLTCALIDAYSK---CGSIQIAKEIFSNIP 104
            + +  ++ +     AL++ Y+K    GS      +F  +P
Sbjct: 130 FIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMP 170

[Close]

BLAST of Cucsa.027500 vs. TAIR10
Match: AT3G62890.1 (AT3G62890.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 345.9 bits (886), Expect = 3.4e-95
Identity = 173/420 (41.19%), Postives = 265/420 (63.10%), Query Frame = 1


Query: 1   MPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSN-----IQPDGFTFASILNACAQLG 60
           MP R+V++W+ +I G V   +Y EA   FR+M         ++P+ FT +++L+AC +LG
Sbjct: 154 MPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLG 213

Query: 61  APSNTHWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNI-PHSDTSVWNVMI 120
           A     WVHA + +  +E++ +L  ALID Y+KCGS++ AK +F+ +    D   ++ MI
Sbjct: 214 ALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMI 273

Query: 121 KGLAIHGLAMDALSLFLRME-HESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYS 180
             LA++GL  +   LF  M   +++ P+++TF+G+L AC H  LI+ G+ YF++M   + 
Sbjct: 274 CCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFG 333

Query: 181 IQPQLEHYGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVAI 240
           I P ++HYG MVDLY R+G ++EA S I +MP+EPDV+ W +LLSG R+  + K  E A+
Sbjct: 334 ITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGAL 393

Query: 241 ANMSQ---RKSGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHF 300
             + +     SG YVLLSN+Y    RW E + +R  M++  + K  G S++E+ G +  F
Sbjct: 394 KRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEF 453

Query: 301 KSGDRLHPESDAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAY 360
             GD    ES+ I  +L  +M+R R  GY+  T+ V +D++E++KE  LS+HSEK+A+A+
Sbjct: 454 VVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAF 513

Query: 361 AILKTSPGAKISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 411
            ++KT PG  + I KNLRIC DCH  +K++S++  R IVVRD  RFH F  G CSC D W
Sbjct: 514 CLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573

[Close]

BLAST of Cucsa.027500 vs. NCBI nr
Match: gi|778664265|ref|XP_011660258.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g50990 [Cucumis sativus])

HSP 1 Score: 838.2 bits (2164), Expect = 6.2e-240
Identity = 410/410 (100.00%), Postives = 410/410 (100.00%), Query Frame = 1


Query: 1   MPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNT 60
           MPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNT
Sbjct: 129 MPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNT 188

Query: 61  HWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIH 120
           HWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIH
Sbjct: 189 HWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIH 248

Query: 121 GLAMDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEH 180
           GLAMDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEH
Sbjct: 249 GLAMDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEH 308

Query: 181 YGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSQRK 240
           YGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSQRK
Sbjct: 309 YGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSQRK 368

Query: 241 SGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPES 300
           SGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPES
Sbjct: 369 SGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPES 428

Query: 301 DAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAK 360
           DAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAK
Sbjct: 429 DAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAK 488

Query: 361 ISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 411
           ISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW
Sbjct: 489 ISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 538

[Close]

BLAST of Cucsa.027500 vs. NCBI nr
Match: gi|659086109|ref|XP_008443769.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g50990 isoform X1 [Cucumis melo])

HSP 1 Score: 807.4 bits (2084), Expect = 1.2e-230
Identity = 393/410 (95.85%), Postives = 404/410 (98.54%), Query Frame = 1


Query: 1   MPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNT 60
           MPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFAS+LNACAQLGAPSNT
Sbjct: 129 MPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASLLNACAQLGAPSNT 188

Query: 61  HWVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIH 120
           HWV AQMTQKKIELNSLL+CALIDAYSKCGSIQIAKEIFSN+PHSDTSVWNVMIKGLAIH
Sbjct: 189 HWVRAQMTQKKIELNSLLSCALIDAYSKCGSIQIAKEIFSNVPHSDTSVWNVMIKGLAIH 248

Query: 121 GLAMDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEH 180
           GLAMDALSLFLRMEHE+VLPDAITFLG+LTACNHG LIDHGRRYFELM+S YSIQPQLEH
Sbjct: 249 GLAMDALSLFLRMEHENVLPDAITFLGILTACNHGGLIDHGRRYFELMRSRYSIQPQLEH 308

Query: 181 YGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSQRK 240
           YGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGC+IYKNHKLAEVAIANMS  K
Sbjct: 309 YGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCKIYKNHKLAEVAIANMSHCK 368

Query: 241 SGDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPES 300
           SGDYVLLSNIYCSLNRW+EAETVRKMMKINRVRKKRGKSWIELGGT Q+FKSGDRLHPES
Sbjct: 369 SGDYVLLSNIYCSLNRWEEAETVRKMMKINRVRKKRGKSWIELGGTTQYFKSGDRLHPES 428

Query: 301 DAIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAK 360
           DAI+KVLCSLMKRTR+EGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAK
Sbjct: 429 DAIDKVLCSLMKRTRSEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAK 488

Query: 361 ISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 411
           ISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW
Sbjct: 489 ISISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 538

[Close]

BLAST of Cucsa.027500 vs. NCBI nr
Match: gi|659086117|ref|XP_008443773.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g50990 isoform X2 [Cucumis melo])

HSP 1 Score: 795.4 bits (2053), Expect = 4.6e-227
Identity = 388/409 (94.87%), Postives = 399/409 (97.56%), Query Frame = 1


Query: 2   PFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNTH 61
           P    VTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFAS+LNACAQLGAPSNTH
Sbjct: 28  PSNFTVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASLLNACAQLGAPSNTH 87

Query: 62  WVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIHG 121
           WV AQMTQKKIELNSLL+CALIDAYSKCGSIQIAKEIFSN+PHSDTSVWNVMIKGLAIHG
Sbjct: 88  WVRAQMTQKKIELNSLLSCALIDAYSKCGSIQIAKEIFSNVPHSDTSVWNVMIKGLAIHG 147

Query: 122 LAMDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEHY 181
           LAMDALSLFLRMEHE+VLPDAITFLG+LTACNHG LIDHGRRYFELM+S YSIQPQLEHY
Sbjct: 148 LAMDALSLFLRMEHENVLPDAITFLGILTACNHGGLIDHGRRYFELMRSRYSIQPQLEHY 207

Query: 182 GVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSQRKS 241
           GVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGC+IYKNHKLAEVAIANMS  KS
Sbjct: 208 GVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCKIYKNHKLAEVAIANMSHCKS 267

Query: 242 GDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPESD 301
           GDYVLLSNIYCSLNRW+EAETVRKMMKINRVRKKRGKSWIELGGT Q+FKSGDRLHPESD
Sbjct: 268 GDYVLLSNIYCSLNRWEEAETVRKMMKINRVRKKRGKSWIELGGTTQYFKSGDRLHPESD 327

Query: 302 AIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAKI 361
           AI+KVLCSLMKRTR+EGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAKI
Sbjct: 328 AIDKVLCSLMKRTRSEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAKI 387

Query: 362 SISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 411
           SISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW
Sbjct: 388 SISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 436

[Close]

BLAST of Cucsa.027500 vs. NCBI nr
Match: gi|823212636|ref|XP_012439066.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g50990 [Gossypium raimondii])

HSP 1 Score: 577.4 bits (1487), Expect = 2.0e-161
Identity = 269/409 (65.77%), Postives = 333/409 (81.42%), Query Frame = 1


Query: 2   PFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNTH 61
           P RDV+TWN +IGG V+NAR++EA  FFR+ML SN++PD FTFAS++  CA+LGA ++  
Sbjct: 131 PVRDVITWNLMIGGYVRNARFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHAL 190

Query: 62  WVHAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIHG 121
           WVH  MT+K+IELN +L+ ALID YSKCG IQ AKE+F++  HSD SVWN MI GLA HG
Sbjct: 191 WVHRLMTKKEIELNPILSSALIDMYSKCGRIQTAKEVFNSADHSDVSVWNAMINGLAAHG 250

Query: 122 LAMDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEHY 181
           L  DA+++F +ME E++ PD+ITF+G+LTAC+H  L++ GR+YF LM S YSI+PQ+EHY
Sbjct: 251 LPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHY 310

Query: 182 GVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSQRKS 241
           GVMVDL+ RAG LEEAY++I  MP+EPDVV WR LLS CRIY+  KL EVAIANMS+ KS
Sbjct: 311 GVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLKS 370

Query: 242 GDYVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPESD 301
           GDYVLLSN+YCS+ RW+ AE VR++MK   +RK RG+SWIELGG I  FK+GDR HPE++
Sbjct: 371 GDYVLLSNMYCSMKRWESAELVRELMKKKGIRKIRGRSWIELGGVIHRFKAGDRSHPETE 430

Query: 302 AIEKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAKI 361
            + KVL  L++RT+ EG++P T+LV MDISEEEKE NL+ HSEK+ALAY ILKTSPG +I
Sbjct: 431 GLYKVLDGLIRRTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREI 490

Query: 362 SISKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 411
            ISKNLRIC DCH WIKLVS++L RVI+VRDRIRFHQFEGG CSC D W
Sbjct: 491 MISKNLRICHDCHNWIKLVSKLLIRVIIVRDRIRFHQFEGGSCSCEDYW 539

[Close]

BLAST of Cucsa.027500 vs. NCBI nr
Match: gi|147860852|emb|CAN83162.1| (hypothetical protein VITISV_022557 [Vitis vinifera])

HSP 1 Score: 574.7 bits (1480), Expect = 1.3e-160
Identity = 265/407 (65.11%), Postives = 332/407 (81.57%), Query Frame = 1


Query: 4   RDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTFASILNACAQLGAPSNTHWV 63
           RDVVTWNS+IGGCV+N R++EA RFFR+ML SN++PDGFTFAS++N CA+LG+  +   V
Sbjct: 156 RDVVTWNSMIGGCVRNERFEEALRFFREMLNSNVEPDGFTFASVINGCARLGSSHHAELV 215

Query: 64  HAQMTQKKIELNSLLTCALIDAYSKCGSIQIAKEIFSNIPHSDTSVWNVMIKGLAIHGLA 123
           H  M +KKI+LN +L+ ALID YSKCG I  AK++F++I H D SVWN MI GLAIHGLA
Sbjct: 216 HGLMIEKKIQLNFILSSALIDLYSKCGRINTAKKVFNSIQHDDVSVWNSMINGLAIHGLA 275

Query: 124 MDALSLFLRMEHESVLPDAITFLGVLTACNHGCLIDHGRRYFELMKSHYSIQPQLEHYGV 183
           +DA+ +F +ME ESV PD+ITF+G+LTAC+H  L++ GRRYF+LM+ HYSIQPQLEHYG 
Sbjct: 276 LDAIGVFSQMEMESVSPDSITFIGILTACSHCGLVEQGRRYFDLMRRHYSIQPQLEHYGA 335

Query: 184 MVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCRIYKNHKLAEVAIANMSQRKSGD 243
           MVDL  RAG +EEAY++I  MP+EPD+V WR LLS CR +KN +L EVAIA +S   SGD
Sbjct: 336 MVDLLGRAGLVEEAYAMIKAMPMEPDIVIWRALLSACRNFKNPELGEVAIAKISHLNSGD 395

Query: 244 YVLLSNIYCSLNRWKEAETVRKMMKINRVRKKRGKSWIELGGTIQHFKSGDRLHPESDAI 303
           Y+LLSN+YCSL +W  AE VR+MMK + VRK RG+SW+ELGG I  FK+GDR HPE+ AI
Sbjct: 396 YILLSNMYCSLEKWDSAERVREMMKRDGVRKNRGRSWVELGGVIHQFKAGDRSHPETGAI 455

Query: 304 EKVLCSLMKRTRTEGYMPVTELVFMDISEEEKEENLSFHSEKMALAYAILKTSPGAKISI 363
            KVL  L++RT+ EG+MP T+LV MD+S+EE+EENL+ HSEK+ALAY ILKTSPG +I +
Sbjct: 456 YKVLEGLIRRTKLEGFMPATDLVLMDVSDEEREENLNSHSEKLALAYVILKTSPGTEIRV 515

Query: 364 SKNLRICDDCHTWIKLVSRVLCRVIVVRDRIRFHQFEGGMCSCGDRW 411
           SKNLR C DCH W+K++SR+L RVI+VRDRIRFHQFEGG+CSC D W
Sbjct: 516 SKNLRTCHDCHCWMKILSRLLSRVIIVRDRIRFHQFEGGLCSCRDYW 562

The following BLAST results are available for this feature:

BLAST of Cucsa.027500 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PP428_ARATH	2.4e-135	55.64	Pentatricopeptide repeat-containing protein At5g50990 OS=Arabidopsis thaliana GN...	[more]
PP330_ARATH	5.7e-100	43.48	Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana GN...	[more]
PP425_ARATH	7.2e-95	42.68	Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana GN...	[more]
PP251_ARATH	1.2e-94	42.68	Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th...	[more]
PP295_ARATH	6.1e-94	41.19	Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana GN...	[more]

BLAST of Cucsa.027500 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXZ9_CUCSA	4.3e-240	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G666990 PE=4 SV=1	[more]
A0A0D2PYT6_GOSRA	1.4e-161	65.77	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G210900 PE=4 SV=1	[more]
A5BED5_VITVI	9.0e-161	65.11	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022557 PE=4 SV=1	[more]
V4TKB4_9ROSI	1.2e-157	64.39	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033814mg PE=4 SV=1	[more]
A0A067EUS7_CITSI	1.2e-157	64.39	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040371mg PE=4 SV=1	[more]

BLAST of Cucsa.027500 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G50990.1	1.4e-136	55.64	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G21065.1	3.2e-101	43.48	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G48910.1	4.0e-96	42.68	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G23330.1	6.9e-96	42.68	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G62890.1	3.4e-95	41.19	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of Cucsa.027500 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778664265\|ref\|XP_011660258.1\|	6.2e-240	100.00	PREDICTED: pentatricopeptide repeat-containing protein At5g50990 [Cucumis sativu...	[more]
gi\|659086109\|ref\|XP_008443769.1\|	1.2e-230	95.85	PREDICTED: pentatricopeptide repeat-containing protein At5g50990 isoform X1 [Cuc...	[more]
gi\|659086117\|ref\|XP_008443773.1\|	4.6e-227	94.87	PREDICTED: pentatricopeptide repeat-containing protein At5g50990 isoform X2 [Cuc...	[more]
gi\|823212636\|ref\|XP_012439066.1\|	2.0e-161	65.77	PREDICTED: pentatricopeptide repeat-containing protein At5g50990 [Gossypium raim...	[more]
gi\|147860852\|emb\|CAN83162.1\|	1.3e-160	65.11	hypothetical protein VITISV_022557 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.027500.1	Cucsa.027500.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 246..269 score: 0.46coord: 109..136 score: 4.1E-5coord: 81..100 score: 0.4coord: 180..204 score: 0.
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 5..52 score: 1.4
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 7..40 score: 2.0E-9coord: 109..142 score: 7.
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 240..274 score: 6.643coord: 106..140 score: 10.249coord: 177..207 score: 6.697coord: 209..239 score: 5.908coord: 141..171 score: 5.623coord: 5..39 score: 13.362coord: 75..105 score: 6.434coord: 40..74 score: 8
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 4..281 score: 7.9E
None	No IPR available	PROFILE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..16 score:

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.027500	Csa1G666990	Cucumber (Chinese Long) v2	cgycuB555
Cucsa.027500	MELO3C029622.2	Melon (DHL92) v3.6.1	cgymedB646

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.027500	Cucumber (Chinese Long) v3	cgycucB603
Cucsa.027500	Wax gourd	cgywgoB791
Cucsa.027500	Cucurbita maxima (Rimu)	cgycmaB1099
Cucsa.027500	Cucurbita moschata (Rifu)	cgycmoB1098
Cucsa.027500	Wild cucumber (PI 183967)	cgycpiB584
Cucsa.027500	Melon (DHL92) v3.5.1	cgymeB651
Cucsa.027500	Watermelon (97103) v1	cgywmB713