Csa1G665940 (gene) Cucumber (Chinese Long) v2

NameCsa1G665940
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPentatricopeptide repeat-containing protein; contains IPR002885 (Pentatricopeptide repeat), IPR011990 (Tetratricopeptide-like helical)
LocationChr1 : 27068354 .. 27070832 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAATGTGATTTATAGAAGTGGTGGTGGGAGCTATTTAAAACAATTTGGGTTTTATTTTAACGCTTTATTCCTTACAAAGGGTTTAATGTAAGAAAAGGATGTAAAGCCCTAGTTATGTCCGTCGTCAAACTTATCAGCAGCGGGAATTAAGAAAAGCAACCTTCTCTTCCTCGCTCTCTCCGCTCCATCCATCAAACCACTCAGTATGTTTCTTCAATCTTCAACTTCTTCTTATTATTTCCCTTCATTTTATTGTCTTCTTCTTCTCATCTCTCTCTCCAAATTTTAAGTTTCAGGAAGTTTTCCTCCCCTTTGGATATCTGTTATCTTTATTATCATCAATAATTGTTCTTCCCTACTTGAGTTTTGTGGGAATACTGTTGTTGTTGGATTACCCATTATCTTGCCCATGACTTTTTGATTCTTTGTTAATGATATTCTTTTCATCTTTTTGATTTCTTGGGTTCTGAAAATCTTCTTTAATCTGCTTATGTGCAGAAGGAAGTATCAAATTCACTTTTGGGTCAGAGTTAGTGAGTTATTTCTATAAAGTACCAGTTATTCATTGGTTAGTTTCAGTTGAAATGAAGCACCTAGTTACTGGATACTGATTATATCATCCCCTTAAGAGCTTTGAAGCACCCCCCTTTGCTATTTGAGGTTGTTATGGCGTATATATTGACCGTTCAGAATTATATGGTAACAGTTAACGGTCTGCATGAATGTTCCAAACAAGAGTATGCTAGTACTGGTATTGGCCAATGCTTGCTGGAAAAAGAAAAACCATCTTCTTTACACTTATATGGTTTGTGCAAGACTAGTTTTAATGGTTCATATAGCTGTCATTGGAGTACAACTCTTGGTTTAGGAAGAAAACAACGGGTTTTACATTTTAAAGGATTGCAGAGGAGTGTATGTATTGATAGAGTTGATGATACTTACGAAGATGAATTGGCGTTGAATGGCCACGAGATAAAGGTTGAAAGGAATTTTTCTGAGAAACTGACTAAAAAGAGGTTCGGTTCTCATAATTGTTCATCGTTGTATCTGGATGGGCCCTTTGTTGGAAATGATGAAGAAACCAACAATGTGATTCTACAAAAATTCTGCTACAAGGGGAAGTTGATGGAAGCATCTAGGGTAGTTGATATTATGGCTAGTCGAAACCAGATTCCAGATTTTGAATGTTGCATAAACATGATTCGTGGGTTCGTAAACACTGACCGAATGGATAAAGCTGTACAAGTCCTGAAAATCATGGTGATGTCTGGTGGTGTTCCAGATATTATTACGTACAACATGGTGATTGGATGTTTATGCAAGCAAGGACATTTGGAATCTGCCATTGAGCTCTTGAACGACATGAGTTTGAGTGGCTGCCCCCCAGATGTGATTACGTATAATGCAGTAATCCGCCACATGTTTGACAATGGATGCTTTGATCAAGCTGTTGAATTTTGGAAGGAACAGCTCAGAAAAGGAACTCCTCCTTATTTAATTACTTACACAATCCTCATTGAGCTAGTCTGGAAGCACCGTGGAACAGTTTGTGCTCTTGAAGTATTGGAAGAAATGGCTAATGAGGGTTGTTATCCTGATCTTGTCACTTACAATTCCTTGATCAACTTAACCTGCAAACAGGGAAAATTTGAAGATGCAGCTTTAGTTATTGATAACCTTCTTTTCCATGGAATGGTACCCGATGCTGTGACTTACAACACCCTTCTCCATTCACTTTCAAGGCGTGGGCATTGGGATGAAGTTGATGAAATCTTAAAAATCATGAGCATTAGTTTGCAGCCTCCAACAGTTGTGACGTGCAACGTCTTGATTAATGGTCTATGTAAAAATGGACTCTTAGATAGTGCCATAAACTTTCTCAATCAAATGTTTTCCTACAATTGTTTGCCTGACATTATAACGTACAACACTCTTCTTGGTGCTCTTTGTAAGGAAGGTATGGTAGATGAGGCTTTTCAATTACTTCATCTTTTAACCGACACGGCCTGCTCTCCTGGCTTAATTTCTTACAATACTGTGCTTGATGGGTTATCTAGAAAGGGCTACATGGATAAAGCAATGAGTTTATACAGTCAAATGATGGAAAATGGGATCATACCAGATGATACCACCCATCGCTCTATAATTTGGGGATTTTGTAGATCAAACAAATTTGTAGAAGCTGTGGAGACATTGAAGGGAATTCTCAAGGGAGGATACGAAGTGAATAGTAGCTTTTACAGAATTCTAGTTCATGAACTATGCTTAAATAAGAAGGTGGATCTTGCAATACAAGTTCTGGAAATGATGTTATCAAGTCCATGTAAATCCAATGAGACAATTTATTCTACTATAATTAACAGCATAGCATCTGCCGGTTTAAAGGAACAGGCTGATGAGTTACGTCAGAAGTTAATAGAATGGAAGGTTTTAGGTAAGCAAGAAGATTAGAAGCAAGTTTTTTTTCTTTTCTTTTTT

mRNA sequence

ATGGCGTATATATTGACCGTTCAGAATTATATGGTAACAGTTAACGGTCTGCATGAATGTTCCAAACAAGAGTATGCTAGTACTGGTATTGGCCAATGCTTGCTGGAAAAAGAAAAACCATCTTCTTTACACTTATATGGTTTGTGCAAGACTAGTTTTAATGGTTCATATAGCTGTCATTGGAGTACAACTCTTGGTTTAGGAAGAAAACAACGGGTTTTACATTTTAAAGGATTGCAGAGGAGTGTATGTATTGATAGAGTTGATGATACTTACGAAGATGAATTGGCGTTGAATGGCCACGAGATAAAGGTTGAAAGGAATTTTTCTGAGAAACTGACTAAAAAGAGGTTCGGTTCTCATAATTGTTCATCGTTGTATCTGGATGGGCCCTTTGTTGGAAATGATGAAGAAACCAACAATGTGATTCTACAAAAATTCTGCTACAAGGGGAAGTTGATGGAAGCATCTAGGGTAGTTGATATTATGGCTAGTCGAAACCAGATTCCAGATTTTGAATGTTGCATAAACATGATTCGTGGGTTCGTAAACACTGACCGAATGGATAAAGCTGTACAAGTCCTGAAAATCATGGTGATGTCTGGTGGTGTTCCAGATATTATTACGTACAACATGGTGATTGGATGTTTATGCAAGCAAGGACATTTGGAATCTGCCATTGAGCTCTTGAACGACATGAGTTTGAGTGGCTGCCCCCCAGATGTGATTACGTATAATGCAGTAATCCGCCACATGTTTGACAATGGATGCTTTGATCAAGCTGTTGAATTTTGGAAGGAACAGCTCAGAAAAGGAACTCCTCCTTATTTAATTACTTACACAATCCTCATTGAGCTAGTCTGGAAGCACCGTGGAACAGTTTGTGCTCTTGAAGTATTGGAAGAAATGGCTAATGAGGGTTGTTATCCTGATCTTGTCACTTACAATTCCTTGATCAACTTAACCTGCAAACAGGGAAAATTTGAAGATGCAGCTTTAGTTATTGATAACCTTCTTTTCCATGGAATGGTACCCGATGCTGTGACTTACAACACCCTTCTCCATTCACTTTCAAGGCGTGGGCATTGGGATGAAGTTGATGAAATCTTAAAAATCATGAGCATTAGTTTGCAGCCTCCAACAGTTGTGACGTGCAACGTCTTGATTAATGGTCTATGTAAAAATGGACTCTTAGATAGTGCCATAAACTTTCTCAATCAAATGTTTTCCTACAATTGTTTGCCTGACATTATAACGTACAACACTCTTCTTGGTGCTCTTTGTAAGGAAGGTATGGTAGATGAGGCTTTTCAATTACTTCATCTTTTAACCGACACGGCCTGCTCTCCTGGCTTAATTTCTTACAATACTGTGCTTGATGGGTTATCTAGAAAGGGCTACATGGATAAAGCAATGAGTTTATACAGTCAAATGATGGAAAATGGGATCATACCAGATGATACCACCCATCGCTCTATAATTTGGGGATTTTGTAGATCAAACAAATTTGTAGAAGCTGTGGAGACATTGAAGGGAATTCTCAAGGGAGGATACGAAGTGAATAGTAGCTTTTACAGAATTCTAGTTCATGAACTATGCTTAAATAAGAAGGTGGATCTTGCAATACAAGTTCTGGAAATGATGTTATCAAGTCCATGTAAATCCAATGAGACAATTTATTCTACTATAATTAACAGCATAGCATCTGCCGGTTTAAAGGAACAGGCTGATGAGTTACGTCAGAAGTTAATAGAATGGAAGGTTTTAGGTAAGCAAGAAGATTAG

Coding sequence (CDS)

ATGGCGTATATATTGACCGTTCAGAATTATATGGTAACAGTTAACGGTCTGCATGAATGTTCCAAACAAGAGTATGCTAGTACTGGTATTGGCCAATGCTTGCTGGAAAAAGAAAAACCATCTTCTTTACACTTATATGGTTTGTGCAAGACTAGTTTTAATGGTTCATATAGCTGTCATTGGAGTACAACTCTTGGTTTAGGAAGAAAACAACGGGTTTTACATTTTAAAGGATTGCAGAGGAGTGTATGTATTGATAGAGTTGATGATACTTACGAAGATGAATTGGCGTTGAATGGCCACGAGATAAAGGTTGAAAGGAATTTTTCTGAGAAACTGACTAAAAAGAGGTTCGGTTCTCATAATTGTTCATCGTTGTATCTGGATGGGCCCTTTGTTGGAAATGATGAAGAAACCAACAATGTGATTCTACAAAAATTCTGCTACAAGGGGAAGTTGATGGAAGCATCTAGGGTAGTTGATATTATGGCTAGTCGAAACCAGATTCCAGATTTTGAATGTTGCATAAACATGATTCGTGGGTTCGTAAACACTGACCGAATGGATAAAGCTGTACAAGTCCTGAAAATCATGGTGATGTCTGGTGGTGTTCCAGATATTATTACGTACAACATGGTGATTGGATGTTTATGCAAGCAAGGACATTTGGAATCTGCCATTGAGCTCTTGAACGACATGAGTTTGAGTGGCTGCCCCCCAGATGTGATTACGTATAATGCAGTAATCCGCCACATGTTTGACAATGGATGCTTTGATCAAGCTGTTGAATTTTGGAAGGAACAGCTCAGAAAAGGAACTCCTCCTTATTTAATTACTTACACAATCCTCATTGAGCTAGTCTGGAAGCACCGTGGAACAGTTTGTGCTCTTGAAGTATTGGAAGAAATGGCTAATGAGGGTTGTTATCCTGATCTTGTCACTTACAATTCCTTGATCAACTTAACCTGCAAACAGGGAAAATTTGAAGATGCAGCTTTAGTTATTGATAACCTTCTTTTCCATGGAATGGTACCCGATGCTGTGACTTACAACACCCTTCTCCATTCACTTTCAAGGCGTGGGCATTGGGATGAAGTTGATGAAATCTTAAAAATCATGAGCATTAGTTTGCAGCCTCCAACAGTTGTGACGTGCAACGTCTTGATTAATGGTCTATGTAAAAATGGACTCTTAGATAGTGCCATAAACTTTCTCAATCAAATGTTTTCCTACAATTGTTTGCCTGACATTATAACGTACAACACTCTTCTTGGTGCTCTTTGTAAGGAAGGTATGGTAGATGAGGCTTTTCAATTACTTCATCTTTTAACCGACACGGCCTGCTCTCCTGGCTTAATTTCTTACAATACTGTGCTTGATGGGTTATCTAGAAAGGGCTACATGGATAAAGCAATGAGTTTATACAGTCAAATGATGGAAAATGGGATCATACCAGATGATACCACCCATCGCTCTATAATTTGGGGATTTTGTAGATCAAACAAATTTGTAGAAGCTGTGGAGACATTGAAGGGAATTCTCAAGGGAGGATACGAAGTGAATAGTAGCTTTTACAGAATTCTAGTTCATGAACTATGCTTAAATAAGAAGGTGGATCTTGCAATACAAGTTCTGGAAATGATGTTATCAAGTCCATGTAAATCCAATGAGACAATTTATTCTACTATAATTAACAGCATAGCATCTGCCGGTTTAAAGGAACAGGCTGATGAGTTACGTCAGAAGTTAATAGAATGGAAGGTTTTAGGTAAGCAAGAAGATTAG

Protein sequence

MAYILTVQNYMVTVNGLHECSKQEYASTGIGQCLLEKEKPSSLHLYGLCKTSFNGSYSCHWSTTLGLGRKQRVLHFKGLQRSVCIDRVDDTYEDELALNGHEIKVERNFSEKLTKKRFGSHNCSSLYLDGPFVGNDEETNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVLKIMVMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCFDQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQPPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEAFQLLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMMENGIIPDDTTHRSIIWGFCRSNKFVEAVETLKGILKGGYEVNSSFYRILVHELCLNKKVDLAIQVLEMMLSSPCKSNETIYSTIINSIASAGLKEQADELRQKLIEWKVLGKQED*
BLAST of Csa1G665940 vs. Swiss-Prot
Match: PPR22_ARATH (Pentatricopeptide repeat-containing protein At1g08610 OS=Arabidopsis thaliana GN=At1g08610 PE=2 SV=1)

HSP 1 Score: 555.8 bits (1431), Expect = 5.6e-157
Identity = 276/533 (51.78%), Postives = 369/533 (69.23%), Query Frame = 1

Query: 58  SCHWSTTLGLGRKQRVLHFKGLQRSVCIDRVDDTYEDELALNGHEIKVERNFSEKLTK-K 117
           S  W   +GL +K       GL  SVCID V+D    E +   H   V  N   ++   K
Sbjct: 33  SLDWKQEIGL-KKDVFFRCHGLLSSVCIDNVND--HAERSSEFHHYGVGTNLRARVKPMK 92

Query: 118 RFGSHNCSSLYLDGPFVGNDEETNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCI 177
           +FG      L  DGP   NDEETNN IL   C  GKL +A ++V++MA  NQ+P F  C 
Sbjct: 93  QFG------LSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCS 152

Query: 178 NMIRGFVNTDRMDKAVQVLKIMVMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLS 237
           N++RG    D++DKA+ +L++MVMSGGVPD ITYNM+IG LCK+GH+ +A+ LL DMSLS
Sbjct: 153 NLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLS 212

Query: 238 GCPPDVITYNAVIRHMFDNGCFDQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCA 297
           G PPDVITYN VIR MFD G  +QA+ FWK+QL+ G PP++ITYT+L+ELV ++ G+  A
Sbjct: 213 GSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARA 272

Query: 298 LEVLEEMANEGCYPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHS 357
           +EVLE+MA EGCYPD+VTYNSL+N  C++G  E+ A VI ++L HG+  + VTYNTLLHS
Sbjct: 273 IEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHS 332

Query: 358 LSRRGHWDEVDEILKIMSISLQPPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPD 417
           L    +WDEV+EIL IM  +   PTV+T N+LINGLCK  LL  AI+F  QM    CLPD
Sbjct: 333 LCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPD 392

Query: 418 IITYNTLLGALCKEGMVDEAFQLLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYS 477
           I+TYNT+LGA+ KEGMVD+A +LL LL +T C PGLI+YN+V+DGL++KG M KA+ LY 
Sbjct: 393 IVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYH 452

Query: 478 QMMENGIIPDDTTHRSIIWGFCRSNKFVEAVETLKGILKGGYEVNSSFYRILVHELCLNK 537
           QM++ GI PDD T RS+I+GFCR+N   EA + LK     G  +  S YR+++  LC  K
Sbjct: 453 QMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKK 512

Query: 538 KVDLAIQVLEMMLSSPCKSNETIYSTIINSIASAGLKEQADELRQKLIEWKVL 590
           ++++AI+V+E+ML+  CK +ETIY+ I+  +   G+  +A +L++KL +WK+L
Sbjct: 513 EIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAVQLQKKLKQWKLL 556

BLAST of Csa1G665940 vs. Swiss-Prot
Match: PPR28_ARATH (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 7.7e-74
Identity = 148/441 (33.56%), Postives = 247/441 (56.01%), Query Frame = 1

Query: 143 ILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVLKIMVMSG 202
           +++ FC  GK  +A+++++I+     +PD      MI G+     ++ A+ VL  M +S 
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS- 202

Query: 203 GVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCFDQAV 262
             PD++TYN ++  LC  G L+ A+E+L+ M    C PDVITY  +I     +     A+
Sbjct: 203 --PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 262

Query: 263 EFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSLINLT 322
           +   E   +G  P ++TY +L+  + K      A++ L +M + GC P+++T+N ++   
Sbjct: 263 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 322

Query: 323 CKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQPPTV 382
           C  G++ DA  ++ ++L  G  P  VT+N L++ L R+G      +IL+ M      P  
Sbjct: 323 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 382

Query: 383 VTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEAFQLLHL 442
           ++ N L++G CK   +D AI +L +M S  C PDI+TYNT+L ALCK+G V++A ++L+ 
Sbjct: 383 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 442

Query: 443 LTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMMENGIIPDDTTHRSIIWGFCRSNK 502
           L+   CSP LI+YNTV+DGL++ G   KA+ L  +M    + PD  T+ S++ G  R  K
Sbjct: 443 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 502

Query: 503 FVEAVETLKGILKGGYEVNSSFYRILVHELCLNKKVDLAIQVLEMMLSSPCKSNETIYST 562
             EA++      + G   N+  +  ++  LC +++ D AI  L  M++  CK NET Y+ 
Sbjct: 503 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 562

Query: 563 IINSIASAGLKEQADELRQKL 584
           +I  +A  G+ ++A EL  +L
Sbjct: 563 LIEGLAYEGMAKEALELLNEL 580


HSP 2 Score: 276.2 bits (705), Expect = 8.6e-73
Identity = 157/479 (32.78%), Postives = 260/479 (54.28%), Query Frame = 1

Query: 98  LNGHEIKVERNFSEKLTKKRFGSHNCSSLYLDGPFVGNDEETNNVILQKFCYKGKLMEAS 157
           LNG   K E   S   +      H  S   ++  F   D E+NN  L++    G+L E  
Sbjct: 68  LNGRAQKFE-TLSSGYSNSNGNGHYSS---VNSSFALEDVESNNH-LRQMVRTGELEEGF 127

Query: 158 RVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVLKIMVMSGGVPDIITYNMVIGCL 217
           + ++ M     +PD   C  +IRGF    +  KA ++L+I+  SG VPD+ITYN++I   
Sbjct: 128 KFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGY 187

Query: 218 CKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCFDQAVEFWKEQLRKGTPPYL 277
           CK G + +A+ +L+ MS+S   PDV+TYN ++R + D+G   QA+E     L++   P +
Sbjct: 188 CKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDV 247

Query: 278 ITYTILIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSLINLTCKQGKFEDAALVIDN 337
           ITYTILIE   +  G   A+++L+EM + GC PD+VTYN L+N  CK+G+ ++A   +++
Sbjct: 248 ITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLND 307

Query: 338 LLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQPPTVVTCNVLINGLCKNGL 397
           +   G  P+ +T+N +L S+   G W + +++L  M      P+VVT N+LIN LC+ GL
Sbjct: 308 MPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGL 367

Query: 398 LDSAINFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEAFQLLHLLTDTACSPGLISYNT 457
           L  AI+ L +M  + C P+ ++YN LL   CKE  +D A + L  +    C P +++YNT
Sbjct: 368 LGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 427

Query: 458 VLDGLSRKGYMDKAMSLYSQMMENGIIPDDTTHRSIIWGFCRSNKFVEAVETLKGILKGG 517
           +L  L + G ++ A+ + +Q+   G  P   T+ ++I G  ++ K  +A++ L  +    
Sbjct: 428 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 487

Query: 518 YEVNSSFYRILVHELCLNKKVDLAIQVLEMMLSSPCKSNETIYSTIINSIASAGLKEQA 577
            + ++  Y  LV  L    KVD AI+          + N   +++I+  +  +   ++A
Sbjct: 488 LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRA 538

BLAST of Csa1G665940 vs. Swiss-Prot
Match: PP213_ARATH (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 4.0e-70
Identity = 151/442 (34.16%), Postives = 231/442 (52.26%), Query Frame = 1

Query: 143 ILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVLKIMVMSG 202
           +++ F     + +A RV++I+    Q PD      +I GF   +R+D A +VL  M    
Sbjct: 130 LIKGFFTLRNIPKAVRVMEILEKFGQ-PDVFAYNALINGFCKMNRIDDATRVLDRMRSKD 189

Query: 203 GVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCFDQAV 262
             PD +TYN++IG LC +G L+ A+++LN +    C P VITY  +I      G  D+A+
Sbjct: 190 FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEAL 249

Query: 263 EFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSLINLT 322
           +   E L +G  P + TY  +I  + K      A E++  +  +GC PD+++YN L+   
Sbjct: 250 KLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRAL 309

Query: 323 CKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQPPTV 382
             QGK+E+   ++  +      P+ VTY+ L+ +L R G  +E   +LK+M      P  
Sbjct: 310 LNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDA 369

Query: 383 VTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEAFQLLHL 442
            + + LI   C+ G LD AI FL  M S  CLPDI+ YNT+L  LCK G  D+A ++   
Sbjct: 370 YSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGK 429

Query: 443 LTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMMENGIIPDDTTHRSIIWGFCRSNK 502
           L +  CSP   SYNT+   L   G   +A+ +  +MM NGI PD+ T+ S+I   CR   
Sbjct: 430 LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGM 489

Query: 503 FVEAVETLKGILKGGYEVNSSFYRILVHELCLNKKVDLAIQVLEMMLSSPCKSNETIYST 562
             EA E L  +    +  +   Y I++   C   +++ AI VLE M+ + C+ NET Y+ 
Sbjct: 490 VDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTV 549

Query: 563 IINSIASAGLKEQADELRQKLI 585
           +I  I  AG + +A EL   L+
Sbjct: 550 LIEGIGFAGYRAEAMELANDLV 570

BLAST of Csa1G665940 vs. Swiss-Prot
Match: PPR99_ARATH (Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.3e-57
Identity = 123/447 (27.52%), Postives = 226/447 (50.56%), Query Frame = 1

Query: 139 TNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVLKIM 198
           T ++++  FC + +L  A  V+  M      PD     +++ GF + +R+  AV ++  M
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177

Query: 199 VMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCF 258
           V  G  PD  T+N +I  L +      A+ L++ M + GC PD++TY  V+  +   G  
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237

Query: 259 DQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSL 318
           D A+   K+  +    P ++ Y  +I+ +  ++    AL +  EM N+G  P++VTYNSL
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297

Query: 319 INLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQ 378
           I   C  G++ DA+ ++ +++   + P+ VT++ L+ +  + G   E +++   M     
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357

Query: 379 PPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEAFQ 438
            P + T + LING C +  LD A +    M S +C P+++TYNTL+   CK   VDE  +
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417

Query: 439 LLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMMENGIIPDDTTHRSIIWGFC 498
           L   ++        ++Y T++ G  +    D A  ++ QM+ +G++PD  T+  ++ G C
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC 477

Query: 499 RSNKFVEAVETLKGILKGGYEVNSSFYRILVHELCLNKKVDLAIQVLEMMLSSPCKSNET 558
            + K   A+   + + +   E +   Y I++  +C   KV+    +   +     K N  
Sbjct: 478 NNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVV 537

Query: 559 IYSTIINSIASAGLKEQADELRQKLIE 586
            Y+T+++     GLKE+AD L +++ E
Sbjct: 538 TYTTMMSGFCRKGLKEEADALFREMKE 564


HSP 2 Score: 181.8 bits (460), Expect = 2.2e-44
Identity = 105/368 (28.53%), Postives = 182/368 (49.46%), Query Frame = 1

Query: 223 LESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCFDQAVEFWKEQLRKGTPPYLITYTI 282
           L+ A+ L  DM  S   P ++ ++ ++  +     FD  +   ++    G    L TY+I
Sbjct: 62  LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121

Query: 283 LIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHG 342
           LI    +      AL VL +M   G  PD+VT NSL+N  C   +  DA  ++  ++  G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181

Query: 343 MVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQPPTVVTCNVLINGLCKNGLLDSAI 402
             PD+ T+NTL+H L R     E   ++  M +    P +VT  +++NGLCK G +D A+
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241

Query: 403 NFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEAFQLLHLLTDTACSPGLISYNTVLDGL 462
           + L +M      P ++ YNT++ ALC    V++A  L   + +    P +++YN+++  L
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301

Query: 463 SRKGYMDKAMSLYSQMMENGIIPDDTTHRSIIWGFCRSNKFVEAVETLKGILKGGYEVNS 522
              G    A  L S M+E  I P+  T  ++I  F +  K VEA +    ++K   + + 
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361

Query: 523 SFYRILVHELCLNKKVDLAIQVLEMMLSSPCKSNETIYSTIINSIASAGLKEQADELRQK 582
             Y  L++  C++ ++D A  + E+M+S  C  N   Y+T+I     A   ++  EL ++
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421

Query: 583 LIEWKVLG 591
           + +  ++G
Sbjct: 422 MSQRGLVG 429


HSP 3 Score: 165.2 bits (417), Expect = 2.1e-39
Identity = 106/434 (24.42%), Postives = 198/434 (45.62%), Query Frame = 1

Query: 170 PDFECCINMIRGF--------------VNTDRMDKAVQVLKIMVMSGGVPDIITYNMVIG 229
           P F  C   +R F              +N  ++D AV +   MV S   P I+ ++ ++ 
Sbjct: 30  PSFSHCSFWVRDFSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLS 89

Query: 230 CLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCFDQAVEFWKEQLRKGTPP 289
            + K    +  I L   M   G   ++ TY+ +I           A+    + ++ G  P
Sbjct: 90  AIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEP 149

Query: 290 YLITYTILIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSLINLTCKQGKFEDAALVI 349
            ++T   L+           A+ ++ +M   G  PD  T+N+LI+   +  +  +A  ++
Sbjct: 150 DIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALV 209

Query: 350 DNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQPPTVVTCNVLINGLCKN 409
           D ++  G  PD VTY  +++ L +RG  D    +LK M      P VV  N +I+ LC  
Sbjct: 210 DRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNY 269

Query: 410 GLLDSAINFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEAFQLLHLLTDTACSPGLISY 469
             ++ A+N   +M +    P+++TYN+L+  LC  G   +A +LL  + +   +P ++++
Sbjct: 270 KNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF 329

Query: 470 NTVLDGLSRKGYMDKAMSLYSQMMENGIIPDDTTHRSIIWGFCRSNKFVEAVETLKGILK 529
           + ++D   ++G + +A  LY +M++  I PD  T+ S+I GFC  ++  EA    + ++ 
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 389

Query: 530 GGYEVNSSFYRILVHELCLNKKVDLAIQVLEMMLSSPCKSNETIYSTIINSIASAGLKEQ 589
                N   Y  L+   C  K+VD  +++   M       N   Y+T+I+    A   + 
Sbjct: 390 KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDN 449


HSP 4 Score: 143.7 bits (361), Expect = 6.6e-33
Identity = 87/299 (29.10%), Postives = 149/299 (49.83%), Query Frame = 1

Query: 139 TNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVLKIM 198
           T + ++  F  +GKL+EA ++ D M  R+  PD     ++I GF   DR+D+A  + ++M
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 387

Query: 199 VMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCF 258
           +     P+++TYN +I   CK   ++  +EL  +MS  G   + +TY  +I   F     
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAREC 447

Query: 259 DQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSL 318
           D A   +K+ +  G  P ++TY+IL++ +  +     AL V E +      PD+ TYN +
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507

Query: 319 INLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQ 378
           I   CK GK ED   +  +L   G+ P+ VTY T++    R+G  +E D + + M     
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567

Query: 379 PPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEAF 438
            P   T N LI    ++G   ++   + +M S   + D  T   L+  +  +G +D++F
Sbjct: 568 LPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVTNMLHDGRLDKSF 625


HSP 5 Score: 137.5 bits (345), Expect = 4.8e-31
Identity = 84/349 (24.07%), Postives = 164/349 (46.99%), Query Frame = 1

Query: 141 NVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVLKIMVM 200
           N I+   C    + +A  +   M ++   P+     ++IR   N  R   A ++L  M+ 
Sbjct: 260 NTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 319

Query: 201 SGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCFDQ 260
               P+++T++ +I    K+G L  A +L ++M      PD+ TY+++I     +   D+
Sbjct: 320 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 379

Query: 261 AVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSLIN 320
           A   ++  + K   P ++TY  LI+   K +     +E+  EM+  G   + VTY +LI+
Sbjct: 380 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIH 439

Query: 321 LTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQPP 380
              +  + ++A +V   ++  G++PD +TY+ LL  L   G  +    + + +  S   P
Sbjct: 440 GFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEP 499

Query: 381 TVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEAFQLL 440
            + T N++I G+CK G ++   +    +      P+++TY T++   C++G+ +EA  L 
Sbjct: 500 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 559

Query: 441 HLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMMENGIIPDDTT 490
             + +    P   +YNT++    R G    +  L  +M     + D +T
Sbjct: 560 REMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 608

BLAST of Csa1G665940 vs. Swiss-Prot
Match: PPR96_ARATH (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2 SV=2)

HSP 1 Score: 224.9 bits (572), Expect = 2.3e-57
Identity = 124/453 (27.37%), Postives = 229/453 (50.55%), Query Frame = 1

Query: 133 VGNDEETNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAV 192
           +  D  + N+++  FC + +L  A  V+  M      PD     +++ G+ +  R+ +AV
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 170

Query: 193 QVLKIMVMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHM 252
            ++  M +    P+ +T+N +I  L        A+ L++ M   GC PD+ TY  V+  +
Sbjct: 171 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 230

Query: 253 FDNGCFDQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVLEEMANEGCYPDL 312
              G  D A+   K+  +      ++ YT +I+ +  ++    AL +  EM N+G  P++
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 290

Query: 313 VTYNSLINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKI 372
           VTYNSLI   C  G++ DA+ ++ +++   + P+ VT++ L+ +  + G   E +++   
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350

Query: 373 MSISLQPPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITYNTLLGALCKEGM 432
           M      P + T + LING C +  LD A +    M S +C P+++TYNTL+   CK   
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410

Query: 433 VDEAFQLLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMMENGIIPDDTTHRS 492
           V+E  +L   ++        ++YNT++ GL + G  D A  ++ +M+ +G+ PD  T+  
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470

Query: 493 IIWGFCRSNKFVEAVETLKGILKGGYEVNSSFYRILVHELCLNKKVDLAIQVLEMMLSSP 552
           ++ G C+  K  +A+   + + K   E +   Y I++  +C   KV+    +   +    
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530

Query: 553 CKSNETIYSTIINSIASAGLKEQADELRQKLIE 586
            K N  IY+T+I+     GLKE+AD L +++ E
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563


HSP 2 Score: 193.4 bits (490), Expect = 7.3e-48
Identity = 112/394 (28.43%), Postives = 195/394 (49.49%), Query Frame = 1

Query: 139 TNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVLKIM 198
           T   ++   C +G +  A  ++  M       D      +I    N   ++ A+ +   M
Sbjct: 222 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 281

Query: 199 VMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCF 258
              G  P+++TYN +I CLC  G    A  LL+DM      P+V+T++A+I      G  
Sbjct: 282 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 341

Query: 259 DQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSL 318
            +A + + E +++   P + TY+ LI     H     A  + E M ++ C+P++VTYN+L
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401

Query: 319 INLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQ 378
           I   CK  + E+   +   +   G+V + VTYNTL+  L + G  D   +I K M     
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461

Query: 379 PPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEAFQ 438
           PP ++T ++L++GLCK G L+ A+     +      PDI TYN ++  +CK G V++ + 
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521

Query: 439 LLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMMENGIIPDDTTHRSIIWGFC 498
           L   L+     P +I Y T++ G  RKG  ++A +L+ +M E+G +P+  T+ ++I    
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 581

Query: 499 RSNKFVEAVETLKGILKGGYEVNSSFYRILVHEL 533
           R      + E +K +   G+  ++S   ++++ L
Sbjct: 582 RDGDKAASAELIKEMRSCGFVGDASTISMVINML 615


HSP 3 Score: 186.4 bits (472), Expect = 8.9e-46
Identity = 117/441 (26.53%), Postives = 206/441 (46.71%), Query Frame = 1

Query: 139 TNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVLKIM 198
           T N ++       K  EA  ++D M +R   PD      ++ G      +D A+ +LK M
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246

Query: 199 VMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCF 258
                  D++ Y  +I  LC   ++  A+ L  +M   G  P+V+TYN++IR + + G +
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306

Query: 259 DQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSL 318
             A     + + +   P ++T++ LI+   K    V A ++ +EM      PD+ TY+SL
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366

Query: 319 INLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQ 378
           IN  C   + ++A  + + ++     P+ VTYNTL+    +    +E  E+ + MS    
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426

Query: 379 PPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEAFQ 438
               VT N LI GL + G  D A     +M S    PDIITY+ LL  LCK G +++A  
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALV 486

Query: 439 LLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMMENGIIPDDTTHRSIIWGFC 498
           +   L  +   P + +YN +++G+ + G ++    L+  +   G+ P+   + ++I GFC
Sbjct: 487 VFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFC 546

Query: 499 RSNKFVEAVETLKGILKGGYEVNSSFYRILVHELCLNKKVDLAIQVLEMMLSSPCKSNET 558
           R     EA    + + + G   NS  Y  L+     +     + ++++ M S     + +
Sbjct: 547 RKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDAS 606

Query: 559 IYSTIINSIASAGLKEQADEL 580
             S +IN +    L++   E+
Sbjct: 607 TISMVINMLHDGRLEKSYLEM 627


HSP 4 Score: 162.9 bits (411), Expect = 1.1e-38
Identity = 99/368 (26.90%), Postives = 175/368 (47.55%), Query Frame = 1

Query: 223 LESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCFDQAVEFWKEQLRKGTPPYLITYTI 282
           L+ A++L  +M  S   P ++ +N ++  +     FD  +   +          L +Y I
Sbjct: 61  LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120

Query: 283 LIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHG 342
           LI    +      AL VL +M   G  PD+VT +SL+N  C   +  +A  ++D +    
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180

Query: 343 MVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQPPTVVTCNVLINGLCKNGLLDSAI 402
             P+ VT+NTL+H L       E   ++  M      P + T   ++NGLCK G +D A+
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 403 NFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEAFQLLHLLTDTACSPGLISYNTVLDGL 462
           + L +M       D++ Y T++ ALC    V++A  L   + +    P +++YN+++  L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300

Query: 463 SRKGYMDKAMSLYSQMMENGIIPDDTTHRSIIWGFCRSNKFVEAVETLKGILKGGYEVNS 522
              G    A  L S M+E  I P+  T  ++I  F +  K VEA +    ++K   + + 
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360

Query: 523 SFYRILVHELCLNKKVDLAIQVLEMMLSSPCKSNETIYSTIINSIASAGLKEQADELRQK 582
             Y  L++  C++ ++D A  + E+M+S  C  N   Y+T+I     A   E+  EL ++
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420

Query: 583 LIEWKVLG 591
           + +  ++G
Sbjct: 421 MSQRGLVG 428

BLAST of Csa1G665940 vs. TrEMBL
Match: A0A0A0LY76_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G665940 PE=4 SV=1)

HSP 1 Score: 1212.2 bits (3135), Expect = 0.0e+00
Identity = 594/594 (100.00%), Postives = 594/594 (100.00%), Query Frame = 1

Query: 1   MAYILTVQNYMVTVNGLHECSKQEYASTGIGQCLLEKEKPSSLHLYGLCKTSFNGSYSCH 60
           MAYILTVQNYMVTVNGLHECSKQEYASTGIGQCLLEKEKPSSLHLYGLCKTSFNGSYSCH
Sbjct: 1   MAYILTVQNYMVTVNGLHECSKQEYASTGIGQCLLEKEKPSSLHLYGLCKTSFNGSYSCH 60

Query: 61  WSTTLGLGRKQRVLHFKGLQRSVCIDRVDDTYEDELALNGHEIKVERNFSEKLTKKRFGS 120
           WSTTLGLGRKQRVLHFKGLQRSVCIDRVDDTYEDELALNGHEIKVERNFSEKLTKKRFGS
Sbjct: 61  WSTTLGLGRKQRVLHFKGLQRSVCIDRVDDTYEDELALNGHEIKVERNFSEKLTKKRFGS 120

Query: 121 HNCSSLYLDGPFVGNDEETNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIR 180
           HNCSSLYLDGPFVGNDEETNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIR
Sbjct: 121 HNCSSLYLDGPFVGNDEETNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIR 180

Query: 181 GFVNTDRMDKAVQVLKIMVMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPP 240
           GFVNTDRMDKAVQVLKIMVMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPP
Sbjct: 181 GFVNTDRMDKAVQVLKIMVMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPP 240

Query: 241 DVITYNAVIRHMFDNGCFDQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVL 300
           DVITYNAVIRHMFDNGCFDQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVL
Sbjct: 241 DVITYNAVIRHMFDNGCFDQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVL 300

Query: 301 EEMANEGCYPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRR 360
           EEMANEGCYPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRR
Sbjct: 301 EEMANEGCYPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRR 360

Query: 361 GHWDEVDEILKIMSISLQPPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITY 420
           GHWDEVDEILKIMSISLQPPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITY
Sbjct: 361 GHWDEVDEILKIMSISLQPPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITY 420

Query: 421 NTLLGALCKEGMVDEAFQLLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMME 480
           NTLLGALCKEGMVDEAFQLLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMME
Sbjct: 421 NTLLGALCKEGMVDEAFQLLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMME 480

Query: 481 NGIIPDDTTHRSIIWGFCRSNKFVEAVETLKGILKGGYEVNSSFYRILVHELCLNKKVDL 540
           NGIIPDDTTHRSIIWGFCRSNKFVEAVETLKGILKGGYEVNSSFYRILVHELCLNKKVDL
Sbjct: 481 NGIIPDDTTHRSIIWGFCRSNKFVEAVETLKGILKGGYEVNSSFYRILVHELCLNKKVDL 540

Query: 541 AIQVLEMMLSSPCKSNETIYSTIINSIASAGLKEQADELRQKLIEWKVLGKQED 595
           AIQVLEMMLSSPCKSNETIYSTIINSIASAGLKEQADELRQKLIEWKVLGKQED
Sbjct: 541 AIQVLEMMLSSPCKSNETIYSTIINSIASAGLKEQADELRQKLIEWKVLGKQED 594

BLAST of Csa1G665940 vs. TrEMBL
Match: A0A061F0N9_THECC (Pentatricopeptide repeat superfamily protein, putative OS=Theobroma cacao GN=TCM_026186 PE=4 SV=1)

HSP 1 Score: 672.5 bits (1734), Expect = 4.6e-190
Identity = 336/569 (59.05%), Postives = 423/569 (74.34%), Query Frame = 1

Query: 20  CSKQEYASTGIGQCLLEKEKPSSLHLYGLCKTSFNGSYSCHWSTTLGLGRKQRVLHFKGL 79
           CS  +Y++  +  C          H     K S        W    G  R+   L F+ L
Sbjct: 31  CSSWKYSTVKVSTC----------HFTCSIKYSRRSQSCLPWKVDNGSEREAFSLQFRAL 90

Query: 80  QRSVCIDRVDDTYEDELALNGHEIKVERNFSEKLTKKRFGSHNCSSLYLDGPFVGNDEET 139
           QRSVCIDR +   ++      H  +V+R F E++  K+    N  +   DGPFV NDEET
Sbjct: 91  QRSVCIDRNEIDQDEWGRSEDHISRVKRKFKEQINSKKLP--NSVTSVFDGPFVRNDEET 150

Query: 140 NNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVLKIMV 199
           NN ILQKFC  G+L +ASR+++IMA +NQIP F  CIN+IRGF+  D +DKA +VL++M+
Sbjct: 151 NNNILQKFCSNGRLKDASRLIEIMARQNQIPHFPSCINLIRGFLKVDELDKAAKVLQVMI 210

Query: 200 MSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCFD 259
           MSGGVPD ITYNM++  LCK+G + +AI+LL DMSLSGCPPDVITYN +IR MFDNG FD
Sbjct: 211 MSGGVPDNITYNMMVRGLCKRGWIRAAIDLLEDMSLSGCPPDVITYNTIIRCMFDNGIFD 270

Query: 260 QAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSLI 319
           QAV FWK+QLRKG PPYLITYTILIELV KH GTV A+EVL++MA EGCYPD+VTYNSL+
Sbjct: 271 QAVGFWKDQLRKGCPPYLITYTILIELVCKHCGTVRAMEVLDDMAIEGCYPDIVTYNSLV 330

Query: 320 NLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQP 379
           N TCK+GK+EDAALVI N++ HGM P+A+TYNTL+HSLS  G WDEVDEIL IM  +  P
Sbjct: 331 NFTCKRGKYEDAALVIYNIISHGMEPNAITYNTLIHSLSSHGCWDEVDEILAIMKETSHP 390

Query: 380 PTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEAFQL 439
           PTVVT N+LINGLCK GLL+ AINF +QM S NC PDI+TYNTLLGAL KEGMV+EA QL
Sbjct: 391 PTVVTYNILINGLCKYGLLERAINFFDQMVSQNCSPDIVTYNTLLGALSKEGMVEEALQL 450

Query: 440 LHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMMENGIIPDDTTHRSIIWGFCR 499
           L  L+ ++CSPGLI+YNTV+DGL+R G M+KAM LY++M+E+ I PDD THR ++WGFCR
Sbjct: 451 LQFLSGSSCSPGLITYNTVIDGLTRSGDMEKAMGLYNKMLEDRISPDDITHRCLVWGFCR 510

Query: 500 SNKFVEAVETLKGILKGGYEVNSSFYRILVHELCLNKKVDLAIQVLEMMLSSPCKSNETI 559
           +++F  AVETL+ + +  + V +S Y++++H LC  +KVDLAIQVLEMM+SS CK +ET 
Sbjct: 511 ADQFERAVETLRVMGEREHRVGNSAYKMVIHGLCKKEKVDLAIQVLEMMVSSRCKPDETT 570

Query: 560 YSTIINSIASAGLKEQADELRQKLIEWKV 589
             TII  IA AG+ E+A++LRQKL+EWKV
Sbjct: 571 CWTIIKGIADAGMMEEANKLRQKLMEWKV 587

BLAST of Csa1G665940 vs. TrEMBL
Match: W9S6Q6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024506 PE=4 SV=1)

HSP 1 Score: 664.5 bits (1713), Expect = 1.2e-187
Identity = 336/595 (56.47%), Postives = 435/595 (73.11%), Query Frame = 1

Query: 1   MAYILTVQNYMVTVNGLHECSKQEYASTGIGQCLLEKEKPSSLHLYGLCKTSFNGSYSCH 60
           M Y+++ QN++V   G     KQ+    GIG       K S LH+  L K + +  +   
Sbjct: 1   MGYVVSQQNFLV--GGHDRIPKQDGPCCGIGHS--SNVKMSVLHINCLNKNNHSTQFPLR 60

Query: 61  WSTTLGLGRKQRVLHFKG---LQRSVCIDRVDDTYEDELALNGHEIKVERNFSEKLTKKR 120
           W         +R  HF G   LQRSV +  +D+  +DE   + +E+ VER   +  +  R
Sbjct: 61  WRLDFS---SKRSAHFSGCVSLQRSVSVSSLDEVEQDEWTSDSYEMDVERKIGQGTSSTR 120

Query: 121 FGSHNCSSLYLDGPFVGNDEETNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCIN 180
              H  S+L L+G FVGN+E+TNN IL+ FC +GK+MEA+R+VD+M  R+QIP F  C N
Sbjct: 121 -RPHEPSTLNLEGRFVGNNEKTNNDILRHFCTRGKVMEAARLVDVMGRRDQIPHFPSCTN 180

Query: 181 MIRGFVNTDRMDKAVQVLKIMVMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSG 240
           +IRG +  D++D A +VL++MVMSGG+PDIITYNM++  LCK+G L+SAI+LL +MSLSG
Sbjct: 181 LIRGLIKIDKIDNASKVLRVMVMSGGIPDIITYNMMVSALCKRGQLKSAIDLLEEMSLSG 240

Query: 241 CPPDVITYNAVIRHMFDNGCFDQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCAL 300
           CPPDVITYN +IR+MFDNG F+QAV FWK+QLRKG PPYL+TYTILI+LV ++ G   A+
Sbjct: 241 CPPDVITYNTIIRYMFDNGNFNQAVGFWKDQLRKGCPPYLVTYTILIDLVCRNLGVERAI 300

Query: 301 EVLEEMANEGCYPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSL 360
           EVLEEMA EGCYPD++TYNSL+N TCKQGKFED  LV+ NLL HGM P+AVTYNTLLHSL
Sbjct: 301 EVLEEMAVEGCYPDIITYNSLVNFTCKQGKFEDTTLVMHNLLSHGMEPNAVTYNTLLHSL 360

Query: 361 SRRGHWDEVDEILKIMSISLQPPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDI 420
              G WDEVDEIL +M+ +LQP TV+T N+LINGLCK GLLD AI+F  QM S NC PDI
Sbjct: 361 CSNGCWDEVDEILNMMNRTLQPATVITYNILINGLCKFGLLDRAIDFFTQMVSENCSPDI 420

Query: 421 ITYNTLLGALCKEGMVDEAFQLLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQ 480
           +TYNTLLG +CKEGMVDEA QLL LL+ T+CSPGLI+YN V+DG ++ GYM+KA+ LY Q
Sbjct: 421 VTYNTLLGPVCKEGMVDEALQLLALLSGTSCSPGLITYNIVIDGFAKMGYMEKAVRLYIQ 480

Query: 481 MMENGIIPDDTTHRSIIWGFCRSNKFVEAVETLKGILKGGYEVNSSFYRILVHELCLNKK 540
           MME GI PDD TH+S+I+GFCR++ F EA E LK + +   +V +S +R ++H LC   K
Sbjct: 481 MMELGISPDDITHQSLIYGFCRADLFEEAAEMLKEMRRRRQKVRNSTFRSVIHGLCKINK 540

Query: 541 VDLAIQVLEMMLSSPCKSNETIYSTIINSIASAGLKEQADELRQKLIEWKVLGKQ 593
           V++AIQVL+MM+SS C  NE++Y TII  IA+AG+ ++A ELRQKL   KVLG++
Sbjct: 541 VEIAIQVLQMMISSRCTPNESVYLTIIKGIAAAGMSKEAYELRQKLTRLKVLGEE 587

BLAST of Csa1G665940 vs. TrEMBL
Match: A0A0D2SGH9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G187800 PE=4 SV=1)

HSP 1 Score: 656.4 bits (1692), Expect = 3.4e-185
Identity = 339/597 (56.78%), Postives = 428/597 (71.69%), Query Frame = 1

Query: 1   MAYILTVQNYMVTVNGLHECSKQEYASTGIG----QCLLEKEKPSSLHLYGLCKTSFNGS 60
           M Y +T+ NY V +   H C ++     G G    +C +     S+L     C  +F+ +
Sbjct: 1   MGYTVTLHNYSVEICRSH-CLQRGLKQPGTGCSSLKCSIVNIPTSNL----TCSVNFSRT 60

Query: 61  -YSC-HWSTTLGLGRKQRVLHFKGLQRSVCIDRVDDTYEDELALNGHEIKVERNFSEKLT 120
            +SC  W    G  R+   L  +GLQRSVCID  +   ++        + V+  F E++ 
Sbjct: 61  IHSCLPWKVNNGSEREVVSLVCQGLQRSVCIDTDEFDQDECWGSKDQNVSVKGKFKEQIN 120

Query: 121 KKRFGSHNCSSLYLDGPFVGNDEETNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFEC 180
            K+    N     LDG FV NDEETNN ILQ+FC  GKL +ASR+++IMA +NQIP F  
Sbjct: 121 LKKVP--NSLMAALDGRFVRNDEETNNDILQQFCSNGKLNDASRLIEIMARQNQIPHFPS 180

Query: 181 CINMIRGFVNTDRMDKAVQVLKIMVMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMS 240
           CIN+IRGFV    +DKA +VL+IM+MSGG+PD ITYNM++  LCK+G + SAI+LL DMS
Sbjct: 181 CINLIRGFVKVGELDKAGRVLQIMIMSGGIPDNITYNMMVRSLCKRGRMRSAIDLLEDMS 240

Query: 241 LSGCPPDVITYNAVIRHMFDNGCFDQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTV 300
           LSGCPPDVITYN +IR MFD+G FDQAV FWK+QLRKG PPYLITYTILIELV +H G  
Sbjct: 241 LSGCPPDVITYNTIIRSMFDHGIFDQAVGFWKDQLRKGCPPYLITYTILIELVCRHCGIA 300

Query: 301 CALEVLEEMANEGCYPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLL 360
            A+EVL +MA EGCYPD+VTYNSL+NLTCKQGK EDAALV+ +++ HGM P+AVTYNTL+
Sbjct: 301 RAMEVLHDMAIEGCYPDIVTYNSLVNLTCKQGKHEDAALVVYSIISHGMEPNAVTYNTLI 360

Query: 361 HSLSRRGHWDEVDEILKIMSISLQPPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCL 420
           HSL   G+W+EVDEIL IM  +L PPTVVT N+LINGLCK GLLD AI F +QM S NC 
Sbjct: 361 HSLCNHGYWNEVDEILAIMKETLHPPTVVTYNILINGLCKYGLLDRAIKFFDQMVSQNCS 420

Query: 421 PDIITYNTLLGALCKEGMVDEAFQLLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSL 480
           PDI+TYNTLLGAL KEGM +EA QLL  L+ ++CSPGLI+YNTV+DG +R G M KAM L
Sbjct: 421 PDIVTYNTLLGALSKEGMAEEALQLLQFLSGSSCSPGLITYNTVIDGFTRTGDMKKAMEL 480

Query: 481 YSQMMENGIIPDDTTHRSIIWGFCRSNKFVEAVETLKGILKGGYEVNSSFYRILVHELCL 540
           Y++M E GI PDD THR ++WGFCRSN+   AV  LK +++  + V +S Y +++H LC 
Sbjct: 481 YNRMSEEGISPDDITHRCLVWGFCRSNQVERAVGILKVMVEQKHRVGTSGYNVVIHGLCK 540

Query: 541 NKKVDLAIQVLEMMLSSPCKSNETIYSTIINSIASAGLKEQADELRQKLIEWKVLGK 592
           + KVDLAIQVLEMM+SS  K ++TIYST+I  IA AG+KE+A++L QKL EW V G+
Sbjct: 541 DGKVDLAIQVLEMMVSSRSKPDDTIYSTVIKGIADAGMKEEANKLHQKLREWNVSGE 590

BLAST of Csa1G665940 vs. TrEMBL
Match: F6H611_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0036g00680 PE=4 SV=1)

HSP 1 Score: 656.0 bits (1691), Expect = 4.4e-185
Identity = 324/524 (61.83%), Postives = 403/524 (76.91%), Query Frame = 1

Query: 69  RKQRVLHFKGLQRSVCIDRVDDTYEDELALNGHEIKVERNFSEKLTKKRFGSHNCSSLYL 128
           R   +L   G +RSVCIDRV+   + E +   +   VE+   E+++ K++ + + SSL  
Sbjct: 65  RNALLLRCIGQERSVCIDRVNGE-DQEWSSGRYAFGVEKKLREQMSSKKYSNSSNSSL-- 124

Query: 129 DGPFVGNDEETNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRM 188
           DG FVGNDEETNN ILQ  C KGKL+ ASR++D+MA RNQIP F  CIN+IRG +  +  
Sbjct: 125 DGSFVGNDEETNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLEST 184

Query: 189 DKAVQVLKIMVMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAV 248
           ++A +VLKIMVMSGG+PDIITYNM++G LCK+G L++AIELL++MSLSGCPPD ITYN +
Sbjct: 185 ERATRVLKIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTI 244

Query: 249 IRHMFDNGCFDQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVLEEMANEGC 308
           +R MFD+G FDQA+ FWK+QLRKG P YLITYT+LIELV KH GTV A+EVLE+MA EGC
Sbjct: 245 LRCMFDHGGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGC 304

Query: 309 YPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDE 368
           YPD+VTYNSL+N TCKQGK+ED AL+I NLL HGM P+ VTYNTLLHSL   G+WDEVDE
Sbjct: 305 YPDIVTYNSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDE 364

Query: 369 ILKIMSISLQPPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITYNTLLGALC 428
           IL IM+ + QPPTVVT N+LINGLCK GLLD AINF +QM S+NCLPDIITYNTLL ALC
Sbjct: 365 ILLIMNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALC 424

Query: 429 KEGMVDEAFQLLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMMENGIIPDDT 488
           KEGMVDEA  LLH L DT CSPGLI+YN V+DGL++KG M+KAM LY +M+E G  PDD 
Sbjct: 425 KEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDI 484

Query: 489 THRSIIWGFCRSNKFVEAVETLKGILKGGYEVNSSFYRILVHELCLNKKVDLAIQVLEMM 548
           THR++ WG  R +   +A+  LK + K    + +S +R ++H LC  KKVD+AIQVLEMM
Sbjct: 485 THRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCKKKKVDIAIQVLEMM 544

Query: 549 LSSPCKSNETIYSTIINSIASAGLKEQADELRQKLIEWKVLGKQ 593
           +SS CK NE IYS II  + +AG+ E+A++L QKL E KV  ++
Sbjct: 545 VSSQCKPNEEIYSAIIKGVGAAGMIEEANQLHQKLTELKVFREE 585

BLAST of Csa1G665940 vs. TAIR10
Match: AT1G08610.1 (AT1G08610.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 555.8 bits (1431), Expect = 3.2e-158
Identity = 276/533 (51.78%), Postives = 369/533 (69.23%), Query Frame = 1

Query: 58  SCHWSTTLGLGRKQRVLHFKGLQRSVCIDRVDDTYEDELALNGHEIKVERNFSEKLTK-K 117
           S  W   +GL +K       GL  SVCID V+D    E +   H   V  N   ++   K
Sbjct: 33  SLDWKQEIGL-KKDVFFRCHGLLSSVCIDNVND--HAERSSEFHHYGVGTNLRARVKPMK 92

Query: 118 RFGSHNCSSLYLDGPFVGNDEETNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCI 177
           +FG      L  DGP   NDEETNN IL   C  GKL +A ++V++MA  NQ+P F  C 
Sbjct: 93  QFG------LSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCS 152

Query: 178 NMIRGFVNTDRMDKAVQVLKIMVMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLS 237
           N++RG    D++DKA+ +L++MVMSGGVPD ITYNM+IG LCK+GH+ +A+ LL DMSLS
Sbjct: 153 NLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLS 212

Query: 238 GCPPDVITYNAVIRHMFDNGCFDQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCA 297
           G PPDVITYN VIR MFD G  +QA+ FWK+QL+ G PP++ITYT+L+ELV ++ G+  A
Sbjct: 213 GSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARA 272

Query: 298 LEVLEEMANEGCYPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHS 357
           +EVLE+MA EGCYPD+VTYNSL+N  C++G  E+ A VI ++L HG+  + VTYNTLLHS
Sbjct: 273 IEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHS 332

Query: 358 LSRRGHWDEVDEILKIMSISLQPPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPD 417
           L    +WDEV+EIL IM  +   PTV+T N+LINGLCK  LL  AI+F  QM    CLPD
Sbjct: 333 LCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPD 392

Query: 418 IITYNTLLGALCKEGMVDEAFQLLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYS 477
           I+TYNT+LGA+ KEGMVD+A +LL LL +T C PGLI+YN+V+DGL++KG M KA+ LY 
Sbjct: 393 IVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYH 452

Query: 478 QMMENGIIPDDTTHRSIIWGFCRSNKFVEAVETLKGILKGGYEVNSSFYRILVHELCLNK 537
           QM++ GI PDD T RS+I+GFCR+N   EA + LK     G  +  S YR+++  LC  K
Sbjct: 453 QMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKK 512

Query: 538 KVDLAIQVLEMMLSSPCKSNETIYSTIINSIASAGLKEQADELRQKLIEWKVL 590
           ++++AI+V+E+ML+  CK +ETIY+ I+  +   G+  +A +L++KL +WK+L
Sbjct: 513 EIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAVQLQKKLKQWKLL 556

BLAST of Csa1G665940 vs. TAIR10
Match: AT1G09900.1 (AT1G09900.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 279.6 bits (714), Expect = 4.4e-75
Identity = 148/441 (33.56%), Postives = 247/441 (56.01%), Query Frame = 1

Query: 143 ILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVLKIMVMSG 202
           +++ FC  GK  +A+++++I+     +PD      MI G+     ++ A+ VL  M +S 
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS- 202

Query: 203 GVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCFDQAV 262
             PD++TYN ++  LC  G L+ A+E+L+ M    C PDVITY  +I     +     A+
Sbjct: 203 --PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 262

Query: 263 EFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSLINLT 322
           +   E   +G  P ++TY +L+  + K      A++ L +M + GC P+++T+N ++   
Sbjct: 263 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 322

Query: 323 CKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQPPTV 382
           C  G++ DA  ++ ++L  G  P  VT+N L++ L R+G      +IL+ M      P  
Sbjct: 323 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 382

Query: 383 VTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEAFQLLHL 442
           ++ N L++G CK   +D AI +L +M S  C PDI+TYNT+L ALCK+G V++A ++L+ 
Sbjct: 383 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 442

Query: 443 LTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMMENGIIPDDTTHRSIIWGFCRSNK 502
           L+   CSP LI+YNTV+DGL++ G   KA+ L  +M    + PD  T+ S++ G  R  K
Sbjct: 443 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 502

Query: 503 FVEAVETLKGILKGGYEVNSSFYRILVHELCLNKKVDLAIQVLEMMLSSPCKSNETIYST 562
             EA++      + G   N+  +  ++  LC +++ D AI  L  M++  CK NET Y+ 
Sbjct: 503 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 562

Query: 563 IINSIASAGLKEQADELRQKL 584
           +I  +A  G+ ++A EL  +L
Sbjct: 563 LIEGLAYEGMAKEALELLNEL 580


HSP 2 Score: 276.2 bits (705), Expect = 4.8e-74
Identity = 157/479 (32.78%), Postives = 260/479 (54.28%), Query Frame = 1

Query: 98  LNGHEIKVERNFSEKLTKKRFGSHNCSSLYLDGPFVGNDEETNNVILQKFCYKGKLMEAS 157
           LNG   K E   S   +      H  S   ++  F   D E+NN  L++    G+L E  
Sbjct: 68  LNGRAQKFE-TLSSGYSNSNGNGHYSS---VNSSFALEDVESNNH-LRQMVRTGELEEGF 127

Query: 158 RVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVLKIMVMSGGVPDIITYNMVIGCL 217
           + ++ M     +PD   C  +IRGF    +  KA ++L+I+  SG VPD+ITYN++I   
Sbjct: 128 KFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGY 187

Query: 218 CKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCFDQAVEFWKEQLRKGTPPYL 277
           CK G + +A+ +L+ MS+S   PDV+TYN ++R + D+G   QA+E     L++   P +
Sbjct: 188 CKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDV 247

Query: 278 ITYTILIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSLINLTCKQGKFEDAALVIDN 337
           ITYTILIE   +  G   A+++L+EM + GC PD+VTYN L+N  CK+G+ ++A   +++
Sbjct: 248 ITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLND 307

Query: 338 LLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQPPTVVTCNVLINGLCKNGL 397
           +   G  P+ +T+N +L S+   G W + +++L  M      P+VVT N+LIN LC+ GL
Sbjct: 308 MPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGL 367

Query: 398 LDSAINFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEAFQLLHLLTDTACSPGLISYNT 457
           L  AI+ L +M  + C P+ ++YN LL   CKE  +D A + L  +    C P +++YNT
Sbjct: 368 LGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 427

Query: 458 VLDGLSRKGYMDKAMSLYSQMMENGIIPDDTTHRSIIWGFCRSNKFVEAVETLKGILKGG 517
           +L  L + G ++ A+ + +Q+   G  P   T+ ++I G  ++ K  +A++ L  +    
Sbjct: 428 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 487

Query: 518 YEVNSSFYRILVHELCLNKKVDLAIQVLEMMLSSPCKSNETIYSTIINSIASAGLKEQA 577
            + ++  Y  LV  L    KVD AI+          + N   +++I+  +  +   ++A
Sbjct: 488 LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRA 538

BLAST of Csa1G665940 vs. TAIR10
Match: AT3G04760.1 (AT3G04760.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 267.3 bits (682), Expect = 2.2e-71
Identity = 151/442 (34.16%), Postives = 231/442 (52.26%), Query Frame = 1

Query: 143 ILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVLKIMVMSG 202
           +++ F     + +A RV++I+    Q PD      +I GF   +R+D A +VL  M    
Sbjct: 130 LIKGFFTLRNIPKAVRVMEILEKFGQ-PDVFAYNALINGFCKMNRIDDATRVLDRMRSKD 189

Query: 203 GVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCFDQAV 262
             PD +TYN++IG LC +G L+ A+++LN +    C P VITY  +I      G  D+A+
Sbjct: 190 FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEAL 249

Query: 263 EFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSLINLT 322
           +   E L +G  P + TY  +I  + K      A E++  +  +GC PD+++YN L+   
Sbjct: 250 KLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRAL 309

Query: 323 CKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQPPTV 382
             QGK+E+   ++  +      P+ VTY+ L+ +L R G  +E   +LK+M      P  
Sbjct: 310 LNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDA 369

Query: 383 VTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEAFQLLHL 442
            + + LI   C+ G LD AI FL  M S  CLPDI+ YNT+L  LCK G  D+A ++   
Sbjct: 370 YSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGK 429

Query: 443 LTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMMENGIIPDDTTHRSIIWGFCRSNK 502
           L +  CSP   SYNT+   L   G   +A+ +  +MM NGI PD+ T+ S+I   CR   
Sbjct: 430 LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGM 489

Query: 503 FVEAVETLKGILKGGYEVNSSFYRILVHELCLNKKVDLAIQVLEMMLSSPCKSNETIYST 562
             EA E L  +    +  +   Y I++   C   +++ AI VLE M+ + C+ NET Y+ 
Sbjct: 490 VDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTV 549

Query: 563 IINSIASAGLKEQADELRQKLI 585
           +I  I  AG + +A EL   L+
Sbjct: 550 LIEGIGFAGYRAEAMELANDLV 570

BLAST of Csa1G665940 vs. TAIR10
Match: AT1G63130.1 (AT1G63130.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 225.7 bits (574), Expect = 7.5e-59
Identity = 123/447 (27.52%), Postives = 226/447 (50.56%), Query Frame = 1

Query: 139 TNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVLKIM 198
           T ++++  FC + +L  A  V+  M      PD     +++ GF + +R+  AV ++  M
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177

Query: 199 VMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCF 258
           V  G  PD  T+N +I  L +      A+ L++ M + GC PD++TY  V+  +   G  
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237

Query: 259 DQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSL 318
           D A+   K+  +    P ++ Y  +I+ +  ++    AL +  EM N+G  P++VTYNSL
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297

Query: 319 INLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQ 378
           I   C  G++ DA+ ++ +++   + P+ VT++ L+ +  + G   E +++   M     
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357

Query: 379 PPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEAFQ 438
            P + T + LING C +  LD A +    M S +C P+++TYNTL+   CK   VDE  +
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417

Query: 439 LLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMMENGIIPDDTTHRSIIWGFC 498
           L   ++        ++Y T++ G  +    D A  ++ QM+ +G++PD  T+  ++ G C
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC 477

Query: 499 RSNKFVEAVETLKGILKGGYEVNSSFYRILVHELCLNKKVDLAIQVLEMMLSSPCKSNET 558
            + K   A+   + + +   E +   Y I++  +C   KV+    +   +     K N  
Sbjct: 478 NNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVV 537

Query: 559 IYSTIINSIASAGLKEQADELRQKLIE 586
            Y+T+++     GLKE+AD L +++ E
Sbjct: 538 TYTTMMSGFCRKGLKEEADALFREMKE 564


HSP 2 Score: 181.8 bits (460), Expect = 1.2e-45
Identity = 105/368 (28.53%), Postives = 182/368 (49.46%), Query Frame = 1

Query: 223 LESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCFDQAVEFWKEQLRKGTPPYLITYTI 282
           L+ A+ L  DM  S   P ++ ++ ++  +     FD  +   ++    G    L TY+I
Sbjct: 62  LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121

Query: 283 LIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHG 342
           LI    +      AL VL +M   G  PD+VT NSL+N  C   +  DA  ++  ++  G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181

Query: 343 MVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQPPTVVTCNVLINGLCKNGLLDSAI 402
             PD+ T+NTL+H L R     E   ++  M +    P +VT  +++NGLCK G +D A+
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241

Query: 403 NFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEAFQLLHLLTDTACSPGLISYNTVLDGL 462
           + L +M      P ++ YNT++ ALC    V++A  L   + +    P +++YN+++  L
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301

Query: 463 SRKGYMDKAMSLYSQMMENGIIPDDTTHRSIIWGFCRSNKFVEAVETLKGILKGGYEVNS 522
              G    A  L S M+E  I P+  T  ++I  F +  K VEA +    ++K   + + 
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361

Query: 523 SFYRILVHELCLNKKVDLAIQVLEMMLSSPCKSNETIYSTIINSIASAGLKEQADELRQK 582
             Y  L++  C++ ++D A  + E+M+S  C  N   Y+T+I     A   ++  EL ++
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421

Query: 583 LIEWKVLG 591
           + +  ++G
Sbjct: 422 MSQRGLVG 429


HSP 3 Score: 165.2 bits (417), Expect = 1.2e-40
Identity = 106/434 (24.42%), Postives = 198/434 (45.62%), Query Frame = 1

Query: 170 PDFECCINMIRGF--------------VNTDRMDKAVQVLKIMVMSGGVPDIITYNMVIG 229
           P F  C   +R F              +N  ++D AV +   MV S   P I+ ++ ++ 
Sbjct: 30  PSFSHCSFWVRDFSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLS 89

Query: 230 CLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCFDQAVEFWKEQLRKGTPP 289
            + K    +  I L   M   G   ++ TY+ +I           A+    + ++ G  P
Sbjct: 90  AIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEP 149

Query: 290 YLITYTILIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSLINLTCKQGKFEDAALVI 349
            ++T   L+           A+ ++ +M   G  PD  T+N+LI+   +  +  +A  ++
Sbjct: 150 DIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALV 209

Query: 350 DNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQPPTVVTCNVLINGLCKN 409
           D ++  G  PD VTY  +++ L +RG  D    +LK M      P VV  N +I+ LC  
Sbjct: 210 DRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNY 269

Query: 410 GLLDSAINFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEAFQLLHLLTDTACSPGLISY 469
             ++ A+N   +M +    P+++TYN+L+  LC  G   +A +LL  + +   +P ++++
Sbjct: 270 KNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF 329

Query: 470 NTVLDGLSRKGYMDKAMSLYSQMMENGIIPDDTTHRSIIWGFCRSNKFVEAVETLKGILK 529
           + ++D   ++G + +A  LY +M++  I PD  T+ S+I GFC  ++  EA    + ++ 
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 389

Query: 530 GGYEVNSSFYRILVHELCLNKKVDLAIQVLEMMLSSPCKSNETIYSTIINSIASAGLKEQ 589
                N   Y  L+   C  K+VD  +++   M       N   Y+T+I+    A   + 
Sbjct: 390 KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDN 449


HSP 4 Score: 143.7 bits (361), Expect = 3.7e-34
Identity = 87/299 (29.10%), Postives = 149/299 (49.83%), Query Frame = 1

Query: 139 TNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVLKIM 198
           T + ++  F  +GKL+EA ++ D M  R+  PD     ++I GF   DR+D+A  + ++M
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 387

Query: 199 VMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCF 258
           +     P+++TYN +I   CK   ++  +EL  +MS  G   + +TY  +I   F     
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAREC 447

Query: 259 DQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSL 318
           D A   +K+ +  G  P ++TY+IL++ +  +     AL V E +      PD+ TYN +
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507

Query: 319 INLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQ 378
           I   CK GK ED   +  +L   G+ P+ VTY T++    R+G  +E D + + M     
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567

Query: 379 PPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEAF 438
            P   T N LI    ++G   ++   + +M S   + D  T   L+  +  +G +D++F
Sbjct: 568 LPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVTNMLHDGRLDKSF 625


HSP 5 Score: 137.5 bits (345), Expect = 2.7e-32
Identity = 84/349 (24.07%), Postives = 164/349 (46.99%), Query Frame = 1

Query: 141 NVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVLKIMVM 200
           N I+   C    + +A  +   M ++   P+     ++IR   N  R   A ++L  M+ 
Sbjct: 260 NTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 319

Query: 201 SGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCFDQ 260
               P+++T++ +I    K+G L  A +L ++M      PD+ TY+++I     +   D+
Sbjct: 320 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 379

Query: 261 AVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSLIN 320
           A   ++  + K   P ++TY  LI+   K +     +E+  EM+  G   + VTY +LI+
Sbjct: 380 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIH 439

Query: 321 LTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQPP 380
              +  + ++A +V   ++  G++PD +TY+ LL  L   G  +    + + +  S   P
Sbjct: 440 GFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEP 499

Query: 381 TVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEAFQLL 440
            + T N++I G+CK G ++   +    +      P+++TY T++   C++G+ +EA  L 
Sbjct: 500 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 559

Query: 441 HLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMMENGIIPDDTT 490
             + +    P   +YNT++    R G    +  L  +M     + D +T
Sbjct: 560 REMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 608

BLAST of Csa1G665940 vs. TAIR10
Match: AT1G62930.1 (AT1G62930.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 224.9 bits (572), Expect = 1.3e-58
Identity = 124/453 (27.37%), Postives = 229/453 (50.55%), Query Frame = 1

Query: 133 VGNDEETNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAV 192
           +  D  + N+++  FC + +L  A  V+  M      PD     +++ G+ +  R+ +AV
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 170

Query: 193 QVLKIMVMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHM 252
            ++  M +    P+ +T+N +I  L        A+ L++ M   GC PD+ TY  V+  +
Sbjct: 171 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 230

Query: 253 FDNGCFDQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVLEEMANEGCYPDL 312
              G  D A+   K+  +      ++ YT +I+ +  ++    AL +  EM N+G  P++
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 290

Query: 313 VTYNSLINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKI 372
           VTYNSLI   C  G++ DA+ ++ +++   + P+ VT++ L+ +  + G   E +++   
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350

Query: 373 MSISLQPPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITYNTLLGALCKEGM 432
           M      P + T + LING C +  LD A +    M S +C P+++TYNTL+   CK   
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410

Query: 433 VDEAFQLLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMMENGIIPDDTTHRS 492
           V+E  +L   ++        ++YNT++ GL + G  D A  ++ +M+ +G+ PD  T+  
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470

Query: 493 IIWGFCRSNKFVEAVETLKGILKGGYEVNSSFYRILVHELCLNKKVDLAIQVLEMMLSSP 552
           ++ G C+  K  +A+   + + K   E +   Y I++  +C   KV+    +   +    
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530

Query: 553 CKSNETIYSTIINSIASAGLKEQADELRQKLIE 586
            K N  IY+T+I+     GLKE+AD L +++ E
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563


HSP 2 Score: 193.4 bits (490), Expect = 4.1e-49
Identity = 112/394 (28.43%), Postives = 195/394 (49.49%), Query Frame = 1

Query: 139 TNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVLKIM 198
           T   ++   C +G +  A  ++  M       D      +I    N   ++ A+ +   M
Sbjct: 222 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 281

Query: 199 VMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCF 258
              G  P+++TYN +I CLC  G    A  LL+DM      P+V+T++A+I      G  
Sbjct: 282 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 341

Query: 259 DQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSL 318
            +A + + E +++   P + TY+ LI     H     A  + E M ++ C+P++VTYN+L
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401

Query: 319 INLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQ 378
           I   CK  + E+   +   +   G+V + VTYNTL+  L + G  D   +I K M     
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461

Query: 379 PPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEAFQ 438
           PP ++T ++L++GLCK G L+ A+     +      PDI TYN ++  +CK G V++ + 
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521

Query: 439 LLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMMENGIIPDDTTHRSIIWGFC 498
           L   L+     P +I Y T++ G  RKG  ++A +L+ +M E+G +P+  T+ ++I    
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 581

Query: 499 RSNKFVEAVETLKGILKGGYEVNSSFYRILVHEL 533
           R      + E +K +   G+  ++S   ++++ L
Sbjct: 582 RDGDKAASAELIKEMRSCGFVGDASTISMVINML 615


HSP 3 Score: 186.4 bits (472), Expect = 5.0e-47
Identity = 117/441 (26.53%), Postives = 206/441 (46.71%), Query Frame = 1

Query: 139 TNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVLKIM 198
           T N ++       K  EA  ++D M +R   PD      ++ G      +D A+ +LK M
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246

Query: 199 VMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCF 258
                  D++ Y  +I  LC   ++  A+ L  +M   G  P+V+TYN++IR + + G +
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306

Query: 259 DQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSL 318
             A     + + +   P ++T++ LI+   K    V A ++ +EM      PD+ TY+SL
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366

Query: 319 INLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQ 378
           IN  C   + ++A  + + ++     P+ VTYNTL+    +    +E  E+ + MS    
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426

Query: 379 PPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEAFQ 438
               VT N LI GL + G  D A     +M S    PDIITY+ LL  LCK G +++A  
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALV 486

Query: 439 LLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMMENGIIPDDTTHRSIIWGFC 498
           +   L  +   P + +YN +++G+ + G ++    L+  +   G+ P+   + ++I GFC
Sbjct: 487 VFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFC 546

Query: 499 RSNKFVEAVETLKGILKGGYEVNSSFYRILVHELCLNKKVDLAIQVLEMMLSSPCKSNET 558
           R     EA    + + + G   NS  Y  L+     +     + ++++ M S     + +
Sbjct: 547 RKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDAS 606

Query: 559 IYSTIINSIASAGLKEQADEL 580
             S +IN +    L++   E+
Sbjct: 607 TISMVINMLHDGRLEKSYLEM 627


HSP 4 Score: 162.9 bits (411), Expect = 6.0e-40
Identity = 99/368 (26.90%), Postives = 175/368 (47.55%), Query Frame = 1

Query: 223 LESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCFDQAVEFWKEQLRKGTPPYLITYTI 282
           L+ A++L  +M  S   P ++ +N ++  +     FD  +   +          L +Y I
Sbjct: 61  LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120

Query: 283 LIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHG 342
           LI    +      AL VL +M   G  PD+VT +SL+N  C   +  +A  ++D +    
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180

Query: 343 MVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQPPTVVTCNVLINGLCKNGLLDSAI 402
             P+ VT+NTL+H L       E   ++  M      P + T   ++NGLCK G +D A+
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 403 NFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEAFQLLHLLTDTACSPGLISYNTVLDGL 462
           + L +M       D++ Y T++ ALC    V++A  L   + +    P +++YN+++  L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300

Query: 463 SRKGYMDKAMSLYSQMMENGIIPDDTTHRSIIWGFCRSNKFVEAVETLKGILKGGYEVNS 522
              G    A  L S M+E  I P+  T  ++I  F +  K VEA +    ++K   + + 
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360

Query: 523 SFYRILVHELCLNKKVDLAIQVLEMMLSSPCKSNETIYSTIINSIASAGLKEQADELRQK 582
             Y  L++  C++ ++D A  + E+M+S  C  N   Y+T+I     A   E+  EL ++
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420

Query: 583 LIEWKVLG 591
           + +  ++G
Sbjct: 421 MSQRGLVG 428

BLAST of Csa1G665940 vs. NCBI nr
Match: gi|449449679|ref|XP_004142592.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g08610 [Cucumis sativus])

HSP 1 Score: 1212.2 bits (3135), Expect = 0.0e+00
Identity = 594/594 (100.00%), Postives = 594/594 (100.00%), Query Frame = 1

Query: 1   MAYILTVQNYMVTVNGLHECSKQEYASTGIGQCLLEKEKPSSLHLYGLCKTSFNGSYSCH 60
           MAYILTVQNYMVTVNGLHECSKQEYASTGIGQCLLEKEKPSSLHLYGLCKTSFNGSYSCH
Sbjct: 1   MAYILTVQNYMVTVNGLHECSKQEYASTGIGQCLLEKEKPSSLHLYGLCKTSFNGSYSCH 60

Query: 61  WSTTLGLGRKQRVLHFKGLQRSVCIDRVDDTYEDELALNGHEIKVERNFSEKLTKKRFGS 120
           WSTTLGLGRKQRVLHFKGLQRSVCIDRVDDTYEDELALNGHEIKVERNFSEKLTKKRFGS
Sbjct: 61  WSTTLGLGRKQRVLHFKGLQRSVCIDRVDDTYEDELALNGHEIKVERNFSEKLTKKRFGS 120

Query: 121 HNCSSLYLDGPFVGNDEETNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIR 180
           HNCSSLYLDGPFVGNDEETNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIR
Sbjct: 121 HNCSSLYLDGPFVGNDEETNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIR 180

Query: 181 GFVNTDRMDKAVQVLKIMVMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPP 240
           GFVNTDRMDKAVQVLKIMVMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPP
Sbjct: 181 GFVNTDRMDKAVQVLKIMVMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPP 240

Query: 241 DVITYNAVIRHMFDNGCFDQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVL 300
           DVITYNAVIRHMFDNGCFDQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVL
Sbjct: 241 DVITYNAVIRHMFDNGCFDQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVL 300

Query: 301 EEMANEGCYPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRR 360
           EEMANEGCYPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRR
Sbjct: 301 EEMANEGCYPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRR 360

Query: 361 GHWDEVDEILKIMSISLQPPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITY 420
           GHWDEVDEILKIMSISLQPPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITY
Sbjct: 361 GHWDEVDEILKIMSISLQPPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITY 420

Query: 421 NTLLGALCKEGMVDEAFQLLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMME 480
           NTLLGALCKEGMVDEAFQLLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMME
Sbjct: 421 NTLLGALCKEGMVDEAFQLLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMME 480

Query: 481 NGIIPDDTTHRSIIWGFCRSNKFVEAVETLKGILKGGYEVNSSFYRILVHELCLNKKVDL 540
           NGIIPDDTTHRSIIWGFCRSNKFVEAVETLKGILKGGYEVNSSFYRILVHELCLNKKVDL
Sbjct: 481 NGIIPDDTTHRSIIWGFCRSNKFVEAVETLKGILKGGYEVNSSFYRILVHELCLNKKVDL 540

Query: 541 AIQVLEMMLSSPCKSNETIYSTIINSIASAGLKEQADELRQKLIEWKVLGKQED 595
           AIQVLEMMLSSPCKSNETIYSTIINSIASAGLKEQADELRQKLIEWKVLGKQED
Sbjct: 541 AIQVLEMMLSSPCKSNETIYSTIINSIASAGLKEQADELRQKLIEWKVLGKQED 594

BLAST of Csa1G665940 vs. NCBI nr
Match: gi|659086093|ref|XP_008443760.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g08610 [Cucumis melo])

HSP 1 Score: 1083.2 bits (2800), Expect = 0.0e+00
Identity = 536/592 (90.54%), Postives = 557/592 (94.09%), Query Frame = 1

Query: 1   MAYILTVQNYMVTVNGLHECSKQEYASTGIGQCLLEKEKPSSLHLYGLCKTSFNGSYSCH 60
           MAY LTVQNYMVTVNG HECSKQEYASTGIGQCLLEKEK SSLHL  LCK+S   SYSCH
Sbjct: 1   MAYTLTVQNYMVTVNGQHECSKQEYASTGIGQCLLEKEKLSSLHLNCLCKSSCISSYSCH 60

Query: 61  WSTTLGLGRKQRVLHFKGLQRSVCIDRVDDTYEDELALNGHEIKVERNFSEKLTKKRFGS 120
           WSTTLG GRKQRVLHFKGLQRSVCIDRVD+TYEDEL LNGHEIKVERNF+EK+TKKR  S
Sbjct: 61  WSTTLGFGRKQRVLHFKGLQRSVCIDRVDNTYEDELVLNGHEIKVERNFAEKMTKKRISS 120

Query: 121 HNCSSLYLDGPFVGNDEETNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIR 180
           HN SSLYLDGPFVGNDE+TNN ILQKFC KGKLMEASR+VDIMASRNQIPDF CC+N+IR
Sbjct: 121 HNGSSLYLDGPFVGNDEQTNNEILQKFCNKGKLMEASRLVDIMASRNQIPDFHCCVNLIR 180

Query: 181 GFVNTDRMDKAVQVLKIMVMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPP 240
           GFV  DR+DKAVQ LKIMVMSGGVPD+ITYNMVIG LCKQGHLESAIELL+DMSLSGCPP
Sbjct: 181 GFVKIDRIDKAVQALKIMVMSGGVPDVITYNMVIGGLCKQGHLESAIELLDDMSLSGCPP 240

Query: 241 DVITYNAVIRHMFDNGCFDQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVL 300
           DVITYNAVIRHMFDNGCFDQA+EFWKEQLRKGTPPYLITYTILIELVWKHRGTV A+EVL
Sbjct: 241 DVITYNAVIRHMFDNGCFDQAIEFWKEQLRKGTPPYLITYTILIELVWKHRGTVRAIEVL 300

Query: 301 EEMANEGCYPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRR 360
           EEMANEGCYPDLVTYNSLINLTCKQGKFED ALVIDNLLFHGMVPDAVTYNTLLHSLSRR
Sbjct: 301 EEMANEGCYPDLVTYNSLINLTCKQGKFEDTALVIDNLLFHGMVPDAVTYNTLLHSLSRR 360

Query: 361 GHWDEVDEILKIMSISLQPPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITY 420
           G WDEVDEILKIMSISLQPPTVVT NVLINGLCKNGLLDSAINFLNQMFS NCLPDIITY
Sbjct: 361 GRWDEVDEILKIMSISLQPPTVVTYNVLINGLCKNGLLDSAINFLNQMFSNNCLPDIITY 420

Query: 421 NTLLGALCKEGMVDEAFQLLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMME 480
           NTLLGAL KEGMVDEAFQLLHLL  +ACSPGLISYNTVLDGLS+KGYMDKAMSLYSQMME
Sbjct: 421 NTLLGALSKEGMVDEAFQLLHLLIGSACSPGLISYNTVLDGLSKKGYMDKAMSLYSQMME 480

Query: 481 NGIIPDDTTHRSIIWGFCRSNKFVEAVETLKGILKGGYEVNSSFYRILVHELCLNKKVDL 540
           NGI+PDD THRSIIWGFCRSNKFVEAVE LKGILKGG++VNSS YR LVHELC+NKKVDL
Sbjct: 481 NGIMPDDITHRSIIWGFCRSNKFVEAVEILKGILKGGHKVNSSSYRFLVHELCINKKVDL 540

Query: 541 AIQVLEMMLSSPCKSNETIYSTIINSIASAGLKEQADELRQKLIEWKVLGKQ 593
           AIQVLEMMLSS CK NETIYSTIINSIAS+GLKEQADELRQKLIE KVLGK+
Sbjct: 541 AIQVLEMMLSSQCKPNETIYSTIINSIASSGLKEQADELRQKLIELKVLGKK 592

BLAST of Csa1G665940 vs. NCBI nr
Match: gi|1009117861|ref|XP_015875546.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g08610 [Ziziphus jujuba])

HSP 1 Score: 716.8 bits (1849), Expect = 3.0e-203
Identity = 360/593 (60.71%), Postives = 447/593 (75.38%), Query Frame = 1

Query: 1   MAYILTVQNYMVTVNGLHECSKQEYASTGIGQCLLEKEKPSSLHLYGLCKTSFNGSYSCH 60
           M Y +T QNYMV   GLH  SKQ+    GIG C   K   S+  +  L + +        
Sbjct: 1   MGYTITQQNYMVDARGLHGFSKQDSPCCGIGSCSFIKA--STFRINCLVEYNRKSQTGLQ 60

Query: 61  WSTTLGLGRKQRVLHFKGLQRSVCIDRVD-DTYEDELALNGHEIKVERNFSEKLTKKRFG 120
           W    G  R  + L +  LQRSV I+ +D +  +DE + +  ++ +ERN  EK++ ++  
Sbjct: 61  WRGNFGSKRNVKFLGYTSLQRSVFINTLDHEDDQDEWSSDIVKMDIERNLGEKISGRK-- 120

Query: 121 SHNCSSLYLDGPFVGNDEETNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMI 180
             + SSL+LDGPFVGNDEETNN ILQ FC  GKLM+ASR++D+MA RNQIP F  C N+I
Sbjct: 121 PRDSSSLHLDGPFVGNDEETNNEILQHFCTNGKLMDASRLIDVMARRNQIPHFPSCKNLI 180

Query: 181 RGFVNTDRMDKAVQVLKIMVMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCP 240
           RG +  DR++KA +VLK+MVMSGGVPDIITYNM++G LCK+  L SAI+LL DMSLSGCP
Sbjct: 181 RGLLRIDRIEKATKVLKVMVMSGGVPDIITYNMMVGSLCKRRRLRSAIDLLEDMSLSGCP 240

Query: 241 PDVITYNAVIRHMFDNGCFDQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEV 300
           PDVITYN ++R MFDNG FDQA+ FWK+QLRKG PPYL+TYT+LIELV KH GT+ A+EV
Sbjct: 241 PDVITYNTIVRCMFDNGDFDQAIRFWKDQLRKGCPPYLVTYTVLIELVCKHCGTMQAIEV 300

Query: 301 LEEMANEGCYPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSR 360
           LE+MA EGCYPD++TYNSL+N TCKQGK+ED ALVI NLL HGM P+AVTYNTLLH+L  
Sbjct: 301 LEDMAIEGCYPDIITYNSLVNYTCKQGKYEDTALVIQNLLRHGMEPNAVTYNTLLHALCS 360

Query: 361 RGHWDEVDEILKIMSISLQPPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIIT 420
            G WDEVDEIL IM+   QPPTVVT N+LINGLCK GLLD AIN   QM S NCLPDI+T
Sbjct: 361 HGCWDEVDEILTIMNGISQPPTVVTYNILINGLCKFGLLDRAINIFAQMVSQNCLPDIVT 420

Query: 421 YNTLLGALCKEGMVDEAFQLLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMM 480
           YNT+LG LCKEGMVDEA QLLHLL+ T+CSPGLI+YNTV+DGL++KGYM+KAM LY QM+
Sbjct: 421 YNTILGPLCKEGMVDEALQLLHLLSGTSCSPGLITYNTVIDGLAKKGYMEKAMGLYRQMI 480

Query: 481 ENGIIPDDTTHRSIIWGFCRSNKFVEAVETLKGILKGGYEVNSSFYRILVHELCLNKKVD 540
           E GIIPDD TH S+I GF R+N+  EAVE LK I    + + +  YR+++HELC N+K+D
Sbjct: 481 EIGIIPDDITHHSLICGFFRANRVEEAVEILKEIHTRDHRIRNGSYRLVIHELCKNEKLD 540

Query: 541 LAIQVLEMMLSSPCKSNETIYSTIINSIASAGLKEQADELRQKLIEWKVLGKQ 593
           +AIQVLEMM+SS    + TIY TII  IA+AG+ ++A+ELR+KL  WK+L ++
Sbjct: 541 IAIQVLEMMISSRRLPDATIYLTIIKGIAAAGMTKEANELREKLTAWKILKEE 589

BLAST of Csa1G665940 vs. NCBI nr
Match: gi|645222805|ref|XP_008218328.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g08610 [Prunus mume])

HSP 1 Score: 684.5 bits (1765), Expect = 1.7e-193
Identity = 338/592 (57.09%), Postives = 436/592 (73.65%), Query Frame = 1

Query: 1   MAYILTVQNYMVTVNGLHECSKQEYASTGIGQCLLEKEKPSSLHLYGLCKTSFNGSYSCH 60
           M Y +T QN+ V V  LH C+KQ    +GIG        P S+  + L K +    Y   
Sbjct: 2   MEYTVTQQNFTVDVRTLHGCTKQVSPCSGIG--------PFSISKF-LNKYNHEAQYCLQ 61

Query: 61  WSTTLGLGRKQRVLHFKGLQRSVCIDRVDDTYEDELALNGHEIKVERNFSEKLTKKRFGS 120
           W   +   R  RVL  KG QR+VCIDRVD+   DE ++   E+  E+   E++ KK+  +
Sbjct: 62  WKGDVSSKRNVRVLQHKGFQRNVCIDRVDEVNVDEWSIGNDEMGTEKKSGEEINKKK--T 121

Query: 121 HNCSSLYLDGPFVGNDEETNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIR 180
                L ++G FVGN EETNN IL+KFC  G+L++ASR++++MA +NQIP F  C N+IR
Sbjct: 122 RTSFILNVEGRFVGNSEETNNDILRKFCSHGRLIDASRLIEVMARQNQIPYFPSCTNLIR 181

Query: 181 GFVNTDRMDKAVQVLKIMVMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPP 240
           G V  DR+DKA ++LKIM+MSGGVPDIITYNM++G LCK+G L SAI+L+ DMSL+GCPP
Sbjct: 182 GLVKIDRLDKAAKILKIMIMSGGVPDIITYNMMVGGLCKRGQLRSAIDLVEDMSLTGCPP 241

Query: 241 DVITYNAVIRHMFDNGCFDQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVL 300
           DVITYNA+IR MF  G FDQA+ FWK+QLRKG PPY++TYT+LIELV KH GT+ A+EVL
Sbjct: 242 DVITYNAIIRCMFTFGNFDQAIAFWKDQLRKGCPPYIVTYTVLIELVCKHCGTMRAVEVL 301

Query: 301 EEMANEGCYPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRR 360
           ++M  EGCYPD++TYNSLIN TC+  K ED AL+I NLL HG+ P+A+TYNT+LHSL  R
Sbjct: 302 DDMVVEGCYPDIITYNSLINFTCRHNKLEDTALIIHNLLSHGLKPNAITYNTILHSLCSR 361

Query: 361 GHWDEVDEILKIMSISLQPPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITY 420
           G WDEVDEI  IM+ + + PTVVT N+LINGLCK GLLD AINF  +M S NC PDIITY
Sbjct: 362 GCWDEVDEIFTIMNGTSESPTVVTYNILINGLCKFGLLDRAINFFTKMISQNCSPDIITY 421

Query: 421 NTLLGALCKEGMVDEAFQLLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMME 480
           NTLLGALC+EGM+++  +LLHLL  T+ SPGLI+YNTV+DGL+++G M+KAM LY QM+E
Sbjct: 422 NTLLGALCREGMINQGLELLHLLCGTSRSPGLITYNTVIDGLAKQGCMEKAMGLYGQMVE 481

Query: 481 NGIIPDDTTHRSIIWGFCRSNKFVEAVETLKGILKGGYEVNSSFYRILVHELCLNKKVDL 540
           NGIIPD+ THRS++ GFC  N   EAV  LK + K G+ V +  Y+ ++H LC NK+VD+
Sbjct: 482 NGIIPDEITHRSLVGGFCGVNLVEEAVLILKEMQKRGHPVRNISYKFVIHGLCRNKRVDV 541

Query: 541 AIQVLEMMLSSPCKSNETIYSTIINSIASAGLKEQADELRQKLIEWKVLGKQ 593
           AIQVLEMM+S+ C  +  IYSTII  +A+AG+ ++ADEL QKLIEW +L ++
Sbjct: 542 AIQVLEMMISNRCMPDGAIYSTIIEGVAAAGMTKEADELHQKLIEWNILSEE 582

BLAST of Csa1G665940 vs. NCBI nr
Match: gi|590642060|ref|XP_007030408.1| (Pentatricopeptide repeat superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 672.5 bits (1734), Expect = 6.6e-190
Identity = 336/569 (59.05%), Postives = 423/569 (74.34%), Query Frame = 1

Query: 20  CSKQEYASTGIGQCLLEKEKPSSLHLYGLCKTSFNGSYSCHWSTTLGLGRKQRVLHFKGL 79
           CS  +Y++  +  C          H     K S        W    G  R+   L F+ L
Sbjct: 31  CSSWKYSTVKVSTC----------HFTCSIKYSRRSQSCLPWKVDNGSEREAFSLQFRAL 90

Query: 80  QRSVCIDRVDDTYEDELALNGHEIKVERNFSEKLTKKRFGSHNCSSLYLDGPFVGNDEET 139
           QRSVCIDR +   ++      H  +V+R F E++  K+    N  +   DGPFV NDEET
Sbjct: 91  QRSVCIDRNEIDQDEWGRSEDHISRVKRKFKEQINSKKLP--NSVTSVFDGPFVRNDEET 150

Query: 140 NNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAVQVLKIMV 199
           NN ILQKFC  G+L +ASR+++IMA +NQIP F  CIN+IRGF+  D +DKA +VL++M+
Sbjct: 151 NNNILQKFCSNGRLKDASRLIEIMARQNQIPHFPSCINLIRGFLKVDELDKAAKVLQVMI 210

Query: 200 MSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGCFD 259
           MSGGVPD ITYNM++  LCK+G + +AI+LL DMSLSGCPPDVITYN +IR MFDNG FD
Sbjct: 211 MSGGVPDNITYNMMVRGLCKRGWIRAAIDLLEDMSLSGCPPDVITYNTIIRCMFDNGIFD 270

Query: 260 QAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNSLI 319
           QAV FWK+QLRKG PPYLITYTILIELV KH GTV A+EVL++MA EGCYPD+VTYNSL+
Sbjct: 271 QAVGFWKDQLRKGCPPYLITYTILIELVCKHCGTVRAMEVLDDMAIEGCYPDIVTYNSLV 330

Query: 320 NLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISLQP 379
           N TCK+GK+EDAALVI N++ HGM P+A+TYNTL+HSLS  G WDEVDEIL IM  +  P
Sbjct: 331 NFTCKRGKYEDAALVIYNIISHGMEPNAITYNTLIHSLSSHGCWDEVDEILAIMKETSHP 390

Query: 380 PTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEAFQL 439
           PTVVT N+LINGLCK GLL+ AINF +QM S NC PDI+TYNTLLGAL KEGMV+EA QL
Sbjct: 391 PTVVTYNILINGLCKYGLLERAINFFDQMVSQNCSPDIVTYNTLLGALSKEGMVEEALQL 450

Query: 440 LHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMMENGIIPDDTTHRSIIWGFCR 499
           L  L+ ++CSPGLI+YNTV+DGL+R G M+KAM LY++M+E+ I PDD THR ++WGFCR
Sbjct: 451 LQFLSGSSCSPGLITYNTVIDGLTRSGDMEKAMGLYNKMLEDRISPDDITHRCLVWGFCR 510

Query: 500 SNKFVEAVETLKGILKGGYEVNSSFYRILVHELCLNKKVDLAIQVLEMMLSSPCKSNETI 559
           +++F  AVETL+ + +  + V +S Y++++H LC  +KVDLAIQVLEMM+SS CK +ET 
Sbjct: 511 ADQFERAVETLRVMGEREHRVGNSAYKMVIHGLCKKEKVDLAIQVLEMMVSSRCKPDETT 570

Query: 560 YSTIINSIASAGLKEQADELRQKLIEWKV 589
             TII  IA AG+ E+A++LRQKL+EWKV
Sbjct: 571 CWTIIKGIADAGMMEEANKLRQKLMEWKV 587

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PPR22_ARATH5.6e-15751.78Pentatricopeptide repeat-containing protein At1g08610 OS=Arabidopsis thaliana GN... [more]
PPR28_ARATH7.7e-7433.56Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN... [more]
PP213_ARATH4.0e-7034.16Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop... [more]
PPR99_ARATH1.3e-5727.52Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidop... [more]
PPR96_ARATH2.3e-5727.37Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A0A0LY76_CUCSA0.0e+00100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G665940 PE=4 SV=1[more]
A0A061F0N9_THECC4.6e-19059.05Pentatricopeptide repeat superfamily protein, putative OS=Theobroma cacao GN=TCM... [more]
W9S6Q6_9ROSA1.2e-18756.47Uncharacterized protein OS=Morus notabilis GN=L484_024506 PE=4 SV=1[more]
A0A0D2SGH9_GOSRA3.4e-18556.78Uncharacterized protein OS=Gossypium raimondii GN=B456_013G187800 PE=4 SV=1[more]
F6H611_VITVI4.4e-18561.83Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0036g00680 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
AT1G08610.13.2e-15851.78 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G09900.14.4e-7533.56 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT3G04760.12.2e-7134.16 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT1G63130.17.5e-5927.52 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G62930.11.3e-5827.37 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
Match NameE-valueIdentityDescription
gi|449449679|ref|XP_004142592.1|0.0e+00100.00PREDICTED: pentatricopeptide repeat-containing protein At1g08610 [Cucumis sativu... [more]
gi|659086093|ref|XP_008443760.1|0.0e+0090.54PREDICTED: pentatricopeptide repeat-containing protein At1g08610 [Cucumis melo][more]
gi|1009117861|ref|XP_015875546.1|3.0e-20360.71PREDICTED: pentatricopeptide repeat-containing protein At1g08610 [Ziziphus jujub... [more]
gi|645222805|ref|XP_008218328.1|1.7e-19357.09PREDICTED: pentatricopeptide repeat-containing protein At1g08610 [Prunus mume][more]
gi|590642060|ref|XP_007030408.1|6.6e-19059.05Pentatricopeptide repeat superfamily protein, putative [Theobroma cacao][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0009507 chloroplast
molecular_function GO:0005515 protein binding
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU089007cucumber EST collection version 3.0transcribed_cluster
CU132517cucumber EST collection version 3.0transcribed_cluster
CU164553cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G665940.1Csa1G665940.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU089007CU089007transcribed_cluster
CU164553CU164553transcribed_cluster
CU132517CU132517transcribed_cluster


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 525..551
score: 1.1coord: 278..308
score: 0.68coord: 177..202
score: 0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 310..358
score: 6.7E-12coord: 205..250
score: 8.1E-16coord: 380..429
score: 1.9E-16coord: 450..499
score: 4.7
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 418..450
score: 2.4E-7coord: 177..207
score: 6.8E-4coord: 313..347
score: 3.6E-6coord: 243..275
score: 1.2E-4coord: 453..486
score: 1.7E-10coord: 348..373
score: 5.8E-5coord: 208..242
score: 8.9E-11coord: 383..417
score: 1.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 206..240
score: 13.011coord: 416..450
score: 12.211coord: 451..485
score: 12.463coord: 136..170
score: 8.561coord: 311..345
score: 11.268coord: 381..415
score: 11.63coord: 521..555
score: 8.495coord: 346..380
score: 10.413coord: 276..310
score: 7.98coord: 241..275
score: 10.994coord: 171..205
score: 8.67coord: 486..520
score: 8.462coord: 556..590
score: 7
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 209..480
score: 8.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 135..589
score: 3.3E
NoneNo IPR availablePANTHERPTHR24015:SF533SUBFAMILY NOT NAMEDcoord: 135..589
score: 3.3E