Csa1G560710 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G560710
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionDNA binding protein, putative; contains IPR019786 (Zinc finger, PHD-type, conserved site)
LocationChr1 : 20377040 .. 20378429 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCTCCAACAGTGAGTTGATTGCAAATTTGCAAACCCTAATTTTAATTTCTCTGCAACTTTCCCCCTCCTTCAACTTTTGAAACCCAAAACAAAACTCAAACGAAACCCTATCAATACCTTCTTCTATTCAGTATTCCCTTCTGGGATTGTTTCATTCTTCCATTCTTTTCATCTTCAATTCTTTACCTTGTTTACGGTTTTTTTTTTCTTCTTTCTATTACGTCTCTCAATGAACCACCCTCCTCTTCCTCCTCCACCTTCCACTCCAAATCCCCCTACCAAAATGCTGAAGGAGTGTGGAAATTGCGGCTCTCAAGGTCGATGGATTCTGCATCACGTTCGTATACGAGGTATTAATCGTCGCCTTTGCACTTCCTGCGTCCTTCGTCTTCATCCCAGTTCGTTTTGCCCTTCTTGCTTCCAGTTCTATGATCTTTCTGTGTCTCCTCATCCCTCCAATCGTTTCACTTGTTCTAAATGTTCTTCTATTACGCATTCTCATTGCGTTGTCAATCCGGCTTGCCCCGACCCTCAGCTTCTGTCCTCCACTACCTCCTCCTCTTATCTCTGCCCTCCCTGCGCCAAGCCCAATTTTTCATTTTTCGATTCCGACTCAAAGCCTCGAATTTCACCTAAGTCTATTGATAGGAAGACGGCTGTGGTGTTGCTCTGTGCGGCTAAGATTGCCTCTGCATCGATGGCTAAGGCAGTGATTGTGGCGCGAGCGGATGCGGAGAGGAAAGTGAGGGAGGCGGCTATGGCGAGGAAGAGAGCAAGAGAGGCTCTTGAGCATGTCGGTTTTGTTGTGGCTAGAGAAAGAGCTAGGCGTAAGGAAGAGGCTTCAGTGGAGGTTTCAGGTTCTGGGAATTTGGGAGTGAAGGAGAAAGAGAGGAATAGGACTTTGGGTCCTACGGTGAAAGCAGAGAATGCTTTTGAGATGCCTGCAGTATCAACTTTGAACACTGGTAGTGCTTTAACTCAGAGAAGGGAGAGCTTAAATGGGTTTGTGAGACAGATGTCAATGGTGAAGAATGAGGCGGCTGCTTCCATGGAGGAATCTGCAAGGCATAAAAATGTTGAGGTTGCTGAACGTTTACAGAGTAACAACAACATTGGTTTATTAAATGAGAAGGAGAAGAATGAGAATGGTGAAGTTGAGCATGTGAAAAATGATCATATTGGAGGAACTGTTAATACCACAAAATAGCCCCTTTTCATGATACAGAGCCAAGAATTGATCAAATCATGGTTTCCTTGGTCTTTTGCTAAATGATATTGTTCTAAAGTATGAAAATTCATTGAGCTACTTTTGTACTGGGTTTGACCTGGCTCTTTAGGAATTCATGTAGTGAGGATAGCACAATTGCCTGTGAGTTTTTTTTTTTTTTT

mRNA sequence

ATGAACCACCCTCCTCTTCCTCCTCCACCTTCCACTCCAAATCCCCCTACCAAAATGCTGAAGGAGTGTGGAAATTGCGGCTCTCAAGGTCGATGGATTCTGCATCACGTTCGTATACGAGGTATTAATCGTCGCCTTTGCACTTCCTGCGTCCTTCGTCTTCATCCCAGTTCGTTTTGCCCTTCTTGCTTCCAGTTCTATGATCTTTCTGTGTCTCCTCATCCCTCCAATCGTTTCACTTGTTCTAAATGTTCTTCTATTACGCATTCTCATTGCGTTGTCAATCCGGCTTGCCCCGACCCTCAGCTTCTGTCCTCCACTACCTCCTCCTCTTATCTCTGCCCTCCCTGCGCCAAGCCCAATTTTTCATTTTTCGATTCCGACTCAAAGCCTCGAATTTCACCTAAGTCTATTGATAGGAAGACGGCTGTGGTGTTGCTCTGTGCGGCTAAGATTGCCTCTGCATCGATGGCTAAGGCAGTGATTGTGGCGCGAGCGGATGCGGAGAGGAAAGTGAGGGAGGCGGCTATGGCGAGGAAGAGAGCAAGAGAGGCTCTTGAGCATGTCGGTTTTGTTGTGGCTAGAGAAAGAGCTAGGCGTAAGGAAGAGGCTTCAGTGGAGGTTTCAGGTTCTGGGAATTTGGGAGTGAAGGAGAAAGAGAGGAATAGGACTTTGGGTCCTACGGTGAAAGCAGAGAATGCTTTTGAGATGCCTGCAGTATCAACTTTGAACACTGGTAGTGCTTTAACTCAGAGAAGGGAGAGCTTAAATGGGTTTGTGAGACAGATGTCAATGGTGAAGAATGAGGCGGCTGCTTCCATGGAGGAATCTGCAAGGCATAAAAATGTTGAGGTTGCTGAACGTTTACAGAGTAACAACAACATTGGTTTATTAAATGAGAAGGAGAAGAATGAGAATGGTGAAGTTGAGCATGTGAAAAATGATCATATTGGAGGAACTGTTAATACCACAAAATAG

Coding sequence (CDS)

ATGAACCACCCTCCTCTTCCTCCTCCACCTTCCACTCCAAATCCCCCTACCAAAATGCTGAAGGAGTGTGGAAATTGCGGCTCTCAAGGTCGATGGATTCTGCATCACGTTCGTATACGAGGTATTAATCGTCGCCTTTGCACTTCCTGCGTCCTTCGTCTTCATCCCAGTTCGTTTTGCCCTTCTTGCTTCCAGTTCTATGATCTTTCTGTGTCTCCTCATCCCTCCAATCGTTTCACTTGTTCTAAATGTTCTTCTATTACGCATTCTCATTGCGTTGTCAATCCGGCTTGCCCCGACCCTCAGCTTCTGTCCTCCACTACCTCCTCCTCTTATCTCTGCCCTCCCTGCGCCAAGCCCAATTTTTCATTTTTCGATTCCGACTCAAAGCCTCGAATTTCACCTAAGTCTATTGATAGGAAGACGGCTGTGGTGTTGCTCTGTGCGGCTAAGATTGCCTCTGCATCGATGGCTAAGGCAGTGATTGTGGCGCGAGCGGATGCGGAGAGGAAAGTGAGGGAGGCGGCTATGGCGAGGAAGAGAGCAAGAGAGGCTCTTGAGCATGTCGGTTTTGTTGTGGCTAGAGAAAGAGCTAGGCGTAAGGAAGAGGCTTCAGTGGAGGTTTCAGGTTCTGGGAATTTGGGAGTGAAGGAGAAAGAGAGGAATAGGACTTTGGGTCCTACGGTGAAAGCAGAGAATGCTTTTGAGATGCCTGCAGTATCAACTTTGAACACTGGTAGTGCTTTAACTCAGAGAAGGGAGAGCTTAAATGGGTTTGTGAGACAGATGTCAATGGTGAAGAATGAGGCGGCTGCTTCCATGGAGGAATCTGCAAGGCATAAAAATGTTGAGGTTGCTGAACGTTTACAGAGTAACAACAACATTGGTTTATTAAATGAGAAGGAGAAGAATGAGAATGGTGAAGTTGAGCATGTGAAAAATGATCATATTGGAGGAACTGTTAATACCACAAAATAG

Protein sequence

MNHPPLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFCPSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKPNFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAVSTLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNNNIGLLNEKEKNENGEVEHVKNDHIGGTVNTTK*
Homology
[Close]
BLAST of Csa1G560710 vs. TrEMBL
Match: A0A0A0LYS3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G560710 PE=4 SV=1)

HSP 1 Score: 659.4 bits (1700), Expect = 2.2e-186
Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 1 

Query: 1   MNHPPLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60
           MNHPPLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC
Sbjct: 1   MNHPPLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60

Query: 61  PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKP 120
           PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKP
Sbjct: 61  PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKP 120

Query: 121 NFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARK 180
           NFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARK
Sbjct: 121 NFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARK 180

Query: 181 RAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAV 240
           RAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAV
Sbjct: 181 RAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAV 240

Query: 241 STLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNNNIGLLNE 300
           STLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNNNIGLLNE
Sbjct: 241 STLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNNNIGLLNE 300

Query: 301 KEKNENGEVEHVKNDHIGGTVNTTK 326
           KEKNENGEVEHVKNDHIGGTVNTTK
Sbjct: 301 KEKNENGEVEHVKNDHIGGTVNTTK 325

[Close]
BLAST of Csa1G560710 vs. TrEMBL
Match: A0A067JHK0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23170 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 2.3e-58
Identity = 120/199 (60.30%), Postives = 146/199 (73.37%), Query Frame = 1 

Query: 22  ECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFCPSCFQFYDLSVSPHPSNRFTC 81
           +C +C S+  W+LHHVR+RGI RRLCT CVLRLHP+SFCP CF FYD +  P PS R +C
Sbjct: 25  DCSHCRSKETWLLHHVRLRGIYRRLCTCCVLRLHPASFCPLCFTFYD-TTPPPPSKRLSC 84

Query: 82  SKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKPNFSFFDSDSKPRISPKSIDRK 141
           S CSS THSHC            S + S ++LCPPCA PNFSFF  D   + + ++ID+K
Sbjct: 85  SNCSSFTHSHCAP----------SQSPSFAFLCPPCADPNFSFFHLD---KTNNRTIDKK 144

Query: 142 TAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALEHVGFVVARERARRK 201
            A VLLCAAKIA+ SMAKAV+VARA+AER+VREAA+ RKRAREALE+V  V     A+RK
Sbjct: 145 MATVLLCAAKIAACSMAKAVVVARAEAERRVREAAVCRKRAREALENVALV-----AKRK 204

Query: 202 EEASVEVSGSGNLGVKEKE 221
           E  SVEVSGSGNLG +E++
Sbjct: 205 EVESVEVSGSGNLGKRERD 204

[Close]
BLAST of Csa1G560710 vs. TrEMBL
Match: B9RFQ8_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_1436640 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 3.1e-55
Identity = 123/226 (54.42%), Postives = 153/226 (67.70%), Query Frame = 1 

Query: 10  PSTPNPP-TKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFCPSCFQFYD 69
           P TPN   T  +  CGNC S+  ++LHHVR+RG++RRLCTSCVLR HPSSFCP CF FYD
Sbjct: 4   PITPNKSNTSTIGGCGNCSSKETFLLHHVRVRGVHRRLCTSCVLRAHPSSFCPCCFTFYD 63

Query: 70  LSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKPNFSFFDSD 129
            S  P PS R +CS C+S THSHC            +S+    +LCPPCA  NF+FF+ +
Sbjct: 64  TS-PPPPSKRISCSNCTSFTHSHCA-----------TSSPPFPFLCPPCADANFNFFNFE 123

Query: 130 SKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALEH 189
           +   I+ K+ID+  A VLLCAAKIA+ SMAKAV VAR +AER+VREAA+ RKRAREALEH
Sbjct: 124 N---INKKTIDKDMATVLLCAAKIAANSMAKAVNVARTEAERRVREAAVCRKRAREALEH 183

Query: 190 VGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENA 235
           V F+     A+RK+  SV+VS S +LG K    N T+G    A +A
Sbjct: 184 VLFL-----AKRKDADSVQVSASAHLG-KRVINNITIGSPQNANSA 208

[Close]
BLAST of Csa1G560710 vs. TrEMBL
Match: A0A061F375_THECC (DNA binding protein, putative OS=Theobroma cacao GN=TCM_026837 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 3.9e-50
Identity = 109/199 (54.77%), Postives = 133/199 (66.83%), Query Frame = 1 

Query: 21  KECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFCPSCFQFYDLSVSPHPSNRFT 80
           KEC NCG+     LH VR+ GI RRLCTSCVLRLHPSSFCP+CF FY  ++ PHPS R  
Sbjct: 31  KECSNCGAHVPHFLHQVRLLGIQRRLCTSCVLRLHPSSFCPACFAFYGGTL-PHPSKRIA 90

Query: 81  CSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKPNFSFFDSDSKPRISPKSIDR 140
           CS CSS THSHC                 SSYLCPPC   +FSFF       +    ID+
Sbjct: 91  CSNCSSFTHSHCA-----------GDNLLSSYLCPPCKDSSFSFFP------LKDNKIDK 150

Query: 141 KTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALEHVGFVVARERARR 200
           K A+ LLCAAKIAS+SM KAV VA A+A+RKVREAA+ARKRAREALEH+ ++   ERAR+
Sbjct: 151 KLALALLCAAKIASSSMGKAVTVAWAEADRKVREAALARKRAREALEHLLYITREERARK 210

Query: 201 K-EEASVEVSGSGNLGVKE 219
           + +  SV++S +    V++
Sbjct: 211 ENDNVSVDLSDANLAKVED 211

[Close]
BLAST of Csa1G560710 vs. TrEMBL
Match: A0A067DPC4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025319mg PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 3.9e-50
Identity = 108/199 (54.27%), Postives = 132/199 (66.33%), Query Frame = 1 

Query: 1   MNHPP---LPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPS 60
           MNH P    P PP  P  PT    +CGNCG+     L +VR+RGI+RRLCT CVL+LHPS
Sbjct: 1   MNHQPPSTTPRPPLPPPSPTTTTGDCGNCGAHVATFLFNVRLRGIHRRLCTKCVLKLHPS 60

Query: 61  SFCPSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPC 120
           SFCP CF FYD S  PHPS R  CS+CSS THSHC  +P  P            YLC  C
Sbjct: 61  SFCPVCFAFYD-SNPPHPSKRQACSQCSSFTHSHCATSPPSP------------YLCRLC 120

Query: 121 AKPNFSFFD-SDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAA 180
           +  ++S     +  P  SPK ID K+A ++LCAAKIAS+SMAKAV VAR +AE+KVR+AA
Sbjct: 121 SPSSYSSITLMNDMPSSSPKRIDDKSAAMVLCAAKIASSSMAKAVTVARNEAEKKVRDAA 180

Query: 181 MARKRAREALEHVGFVVAR 196
           +ARK+AREALE VG ++ +
Sbjct: 181 LARKKAREALERVGVLITK 186

[Close]
BLAST of Csa1G560710 vs. TAIR10
Match: AT1G09520.1 (AT1G09520.1 LOCATED IN: chloroplast)

HSP 1 Score: 156.0 bits (393), Expect = 4.0e-38
Identity = 97/269 (36.06%), Postives = 133/269 (49.44%), Query Frame = 1 

Query: 11  STPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFCPSCFQFYDLS 70
           +T +      + C +CGS   W++H VR+R   R  CT C+LR HP+SFCP CF  YD S
Sbjct: 14  ATSDAAANSTERCDDCGSSDAWVIHTVRLRASLRFFCTHCLLRNHPASFCPGCFALYDSS 73

Query: 71  VSPHPSNRFTCS--KCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKPN-FSFFDS 130
             P    R +CS   C S+TH HC               +  SYLCPPC  PN FSFF  
Sbjct: 74  --PPSFRRVSCSIKGCHSLTHIHCA-----------GDESHLSYLCPPCRDPNSFSFF-- 133

Query: 131 DSKPRISPKS---IDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRARE 190
             +P +       +D+  +   LCAAKIA++SM KAV+ A+ + +R+ +EAA+A+KRARE
Sbjct: 134 --RPIVDENGSRFVDKALSEAFLCAAKIAASSMNKAVMTAKCETDRRGKEAALAKKRARE 193

Query: 191 ALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAVSTLN 250
           ALE V  + A+E+AR       E        +       T+  T  ++        +T N
Sbjct: 194 ALEQVVMLDAKEKARSVVPKLKEAPVDQKPKLSPASNGATVKETESSDTTTTPTTTTTKN 253

Query: 251 TGSALTQRRESLNGFVRQMSMVKNEAAAS 274
            G    Q   +      Q++ VK EA AS
Sbjct: 254 NGGTEKQNPAT------QLAKVKQEADAS 259

[Close]
BLAST of Csa1G560710 vs. TAIR10
Match: AT3G17460.1 (AT3G17460.1 PHD finger family protein)

HSP 1 Score: 105.5 bits (262), Expect = 6.2e-23
Identity = 67/198 (33.84%), Postives = 98/198 (49.49%), Query Frame = 1 

Query: 16  PTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFCPSCFQFYDLSVSPHP 75
           P +  +EC  C  +    +H V   G  RRLCT C+L+ +   FC  CF  +D +V P  
Sbjct: 3   PEQKQRECIVCREKEPSFIHTVIKTGAFRRLCTDCLLKEYREHFCSVCFNLFDNAVPPQA 62

Query: 76  SNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTS-----SSYLCPPCAKPNFSFFDSDSK 135
             R  C  C S TH  C   P  P     SS++S     SS+ C PC+ PNF+FF     
Sbjct: 63  --RIICVNCPSSTHLSCSTQP--PSSSAASSSSSAPPPASSFTCQPCSNPNFTFFPKSRV 122

Query: 136 PRISPKS--IDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALEH 195
               P    +  K+A+ L+ A  I+ A+M KAV + + +A +K+  A  A+ RA+ AL +
Sbjct: 123 NEDVPDETPLTPKSAMALVAAGNISVANMNKAVALLKEEALKKIIAAKTAKLRAKGALTN 182

Query: 196 VGFVVARE---RARRKEE 204
           +  +V R+     +RKE+
Sbjct: 183 LQDIVIRQSKVTGKRKED 196

[Close]
BLAST of Csa1G560710 vs. NCBI nr
Match: gi|778662161|ref|XP_011659447.1| (PREDICTED: uncharacterized protein LOC105436183 [Cucumis sativus])

HSP 1 Score: 659.4 bits (1700), Expect = 3.1e-186
Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 1 

Query: 1   MNHPPLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60
           MNHPPLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC
Sbjct: 1   MNHPPLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60

Query: 61  PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKP 120
           PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKP
Sbjct: 61  PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKP 120

Query: 121 NFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARK 180
           NFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARK
Sbjct: 121 NFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARK 180

Query: 181 RAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAV 240
           RAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAV
Sbjct: 181 RAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAV 240

Query: 241 STLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNNNIGLLNE 300
           STLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNNNIGLLNE
Sbjct: 241 STLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNNNIGLLNE 300

Query: 301 KEKNENGEVEHVKNDHIGGTVNTTK 326
           KEKNENGEVEHVKNDHIGGTVNTTK
Sbjct: 301 KEKNENGEVEHVKNDHIGGTVNTTK 325

[Close]
BLAST of Csa1G560710 vs. NCBI nr
Match: gi|659099270|ref|XP_008450515.1| (PREDICTED: uncharacterized protein LOC103492096 [Cucumis melo])

HSP 1 Score: 639.0 bits (1647), Expect = 4.4e-180
Identity = 313/325 (96.31%), Postives = 318/325 (97.85%), Query Frame = 1 

Query: 1   MNHPPLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60
           MNHP LPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC
Sbjct: 1   MNHPHLPPPPSTPNPPTKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFC 60

Query: 61  PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKP 120
           PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSST+SSSYLCPPCAKP
Sbjct: 61  PSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTSSSSYLCPPCAKP 120

Query: 121 NFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARK 180
           NFSFFD DSKPRISPKSIDRKTAVVLLCAAKIAS SM KA IVARADAERKVREAAMARK
Sbjct: 121 NFSFFDLDSKPRISPKSIDRKTAVVLLCAAKIASTSMGKAAIVARADAERKVREAAMARK 180

Query: 181 RAREALEHVGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENAFEMPAV 240
           RAREALEHVGFV+ARERARRKEEASVEVSGSGNLG+KEKERNR LGPTVKAENAFE+PAV
Sbjct: 181 RAREALEHVGFVLARERARRKEEASVEVSGSGNLGMKEKERNRNLGPTVKAENAFEIPAV 240

Query: 241 STLNTGSALTQRRESLNGFVRQMSMVKNEAAASMEESARHKNVEVAERLQSNNNIGLLNE 300
           STLNTG+ALTQRRESLNGFVRQMSMVKNE AASMEESARHKNVEVAERLQSNNNIGLLNE
Sbjct: 241 STLNTGTALTQRRESLNGFVRQMSMVKNEVAASMEESARHKNVEVAERLQSNNNIGLLNE 300

Query: 301 KEKNENGEVEHVKNDHIGGTVNTTK 326
           KEKNENGEVEHVKNDHIGGTVNTTK
Sbjct: 301 KEKNENGEVEHVKNDHIGGTVNTTK 325

[Close]
BLAST of Csa1G560710 vs. NCBI nr
Match: gi|1009116458|ref|XP_015874783.1| (PREDICTED: uncharacterized protein LOC107411671 [Ziziphus jujuba])

HSP 1 Score: 272.7 bits (696), Expect = 8.3e-70
Identity = 171/353 (48.44%), Postives = 210/353 (59.49%), Query Frame = 1 

Query: 1   MNHPPLPPP-PSTPNPPTKM-----------LKECGNCGSQGRWILHHVRIRGINRRLCT 60
           MN P   P   S PNP +               ECGNCGSQ RW+LHHVRIRGI+RRLCT
Sbjct: 1   MNQPSTKPNNTSNPNPNSNARAPPALAAAAAAAECGNCGSQKRWVLHHVRIRGIHRRLCT 60

Query: 61  SCVLRLHPSSFCPSCFQFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTT 120
           SCVLRLHPSSFCPSC Q YD + +P  S R TC+KCSS THSHC    + P P   S+TT
Sbjct: 61  SCVLRLHPSSFCPSCLQCYDTTNTPVSSKRLTCAKCSSFTHSHCA---SLPPPSASSTTT 120

Query: 121 -----SSSYLCPPCAKPNFSFFDSDSKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIV 180
                SS+YLCPPCA PNF+FFD DS P    K+ID++ A+VLLCA+KIAS SMAKAVIV
Sbjct: 121 NTTPSSSTYLCPPCATPNFTFFDLDSDPN---KAIDKRLALVLLCASKIASTSMAKAVIV 180

Query: 181 ARADAERKVREAAMARKRAREALEHVGFVV--ARERARRKEEASV-EVSGSGNLGVKEKE 240
           ARA+AER+VREAA+ARKRAREAL+H+  +V    ++  RK+ A V EVSGS NL  K KE
Sbjct: 181 ARAEAERRVREAALARKRAREALDHLALLVHSRGDKVVRKDVAEVSEVSGSANLVHKHKE 240

Query: 241 RNRTLGPTVKAENAFEMPAVSTLNTGSALTQRRESLNGF--VRQMSMVKNEAAASMEESA 300
           + +   P + A                  +Q +E  NGF   RQ   +K   +    + +
Sbjct: 241 KEKEKNPPLFA------------------SQGKEMFNGFNSPRQNPAMKPSGSPPPNKKS 300

Query: 301 RHKNVEVAERLQSNNNIGLLNEKEKN------ENGEVEHVKNDHIGGTVNTTK 326
            +   E     QSN N+   N+KEK+      E+ E+E  KN   G  V   K
Sbjct: 301 NNGEPEHGCANQSNGNV---NDKEKSGDLVKRESMELEQ-KNHGRGENVPAAK 325

[Close]
BLAST of Csa1G560710 vs. NCBI nr
Match: gi|802755152|ref|XP_012088829.1| (PREDICTED: uncharacterized protein LOC105647377 [Jatropha curcas])

HSP 1 Score: 234.2 bits (596), Expect = 3.3e-58
Identity = 120/199 (60.30%), Postives = 146/199 (73.37%), Query Frame = 1 

Query: 22  ECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFCPSCFQFYDLSVSPHPSNRFTC 81
           +C +C S+  W+LHHVR+RGI RRLCT CVLRLHP+SFCP CF FYD +  P PS R +C
Sbjct: 25  DCSHCRSKETWLLHHVRLRGIYRRLCTCCVLRLHPASFCPLCFTFYD-TTPPPPSKRLSC 84

Query: 82  SKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKPNFSFFDSDSKPRISPKSIDRK 141
           S CSS THSHC            S + S ++LCPPCA PNFSFF  D   + + ++ID+K
Sbjct: 85  SNCSSFTHSHCAP----------SQSPSFAFLCPPCADPNFSFFHLD---KTNNRTIDKK 144

Query: 142 TAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALEHVGFVVARERARRK 201
            A VLLCAAKIA+ SMAKAV+VARA+AER+VREAA+ RKRAREALE+V  V     A+RK
Sbjct: 145 MATVLLCAAKIAACSMAKAVVVARAEAERRVREAAVCRKRAREALENVALV-----AKRK 204

Query: 202 EEASVEVSGSGNLGVKEKE 221
           E  SVEVSGSGNLG +E++
Sbjct: 205 EVESVEVSGSGNLGKRERD 204

[Close]
BLAST of Csa1G560710 vs. NCBI nr
Match: gi|1000981027|ref|XP_015570582.1| (PREDICTED: uncharacterized protein LOC8274959 [Ricinus communis])

HSP 1 Score: 223.8 bits (569), Expect = 4.4e-55
Identity = 123/226 (54.42%), Postives = 153/226 (67.70%), Query Frame = 1 

Query: 10  PSTPNPP-TKMLKECGNCGSQGRWILHHVRIRGINRRLCTSCVLRLHPSSFCPSCFQFYD 69
           P TPN   T  +  CGNC S+  ++LHHVR+RG++RRLCTSCVLR HPSSFCP CF FYD
Sbjct: 4   PITPNKSNTSTIGGCGNCSSKETFLLHHVRVRGVHRRLCTSCVLRAHPSSFCPCCFTFYD 63

Query: 70  LSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKPNFSFFDSD 129
            S  P PS R +CS C+S THSHC            +S+    +LCPPCA  NF+FF+ +
Sbjct: 64  TS-PPPPSKRISCSNCTSFTHSHCA-----------TSSPPFPFLCPPCADANFNFFNFE 123

Query: 130 SKPRISPKSIDRKTAVVLLCAAKIASASMAKAVIVARADAERKVREAAMARKRAREALEH 189
           +   I+ K+ID+  A VLLCAAKIA+ SMAKAV VAR +AER+VREAA+ RKRAREALEH
Sbjct: 124 N---INKKTIDKDMATVLLCAAKIAANSMAKAVNVARTEAERRVREAAVCRKRAREALEH 183

Query: 190 VGFVVARERARRKEEASVEVSGSGNLGVKEKERNRTLGPTVKAENA 235
           V F+     A+RK+  SV+VS S +LG K    N T+G    A +A
Sbjct: 184 VLFL-----AKRKDADSVQVSASAHLG-KRVINNITIGSPQNANSA 208

The following BLAST results are available for this feature:
BLAST of Csa1G560710 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LYS3_CUCSA2.2e-186100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G560710 PE=4 SV=1[more]
A0A067JHK0_JATCU2.3e-5860.30Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23170 PE=4 SV=1[more]
B9RFQ8_RICCO3.1e-5554.42DNA binding protein, putative OS=Ricinus communis GN=RCOM_1436640 PE=4 SV=1[more]
A0A061F375_THECC3.9e-5054.77DNA binding protein, putative OS=Theobroma cacao GN=TCM_026837 PE=4 SV=1[more]
A0A067DPC4_CITSI3.9e-5054.27Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025319mg PE=4 SV=1[more]
BLAST of Csa1G560710 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G09520.14.0e-3836.06 LOCATED IN: chloroplast[more]
AT3G17460.16.2e-2333.84 PHD finger family protein[more]
BLAST of Csa1G560710 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778662161|ref|XP_011659447.1|3.1e-186100.00PREDICTED: uncharacterized protein LOC105436183 [Cucumis sativus][more]
gi|659099270|ref|XP_008450515.1|4.4e-18096.31PREDICTED: uncharacterized protein LOC103492096 [Cucumis melo][more]
gi|1009116458|ref|XP_015874783.1|8.3e-7048.44PREDICTED: uncharacterized protein LOC107411671 [Ziziphus jujuba][more]
gi|802755152|ref|XP_012088829.1|3.3e-5860.30PREDICTED: uncharacterized protein LOC105647377 [Jatropha curcas][more]
gi|1000981027|ref|XP_015570582.1|4.4e-5554.42PREDICTED: uncharacterized protein LOC8274959 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR019786Zinc_finger_PHD-type_CS
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU115248cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G560710.1Csa1G560710.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU115248CU115248transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 47..117
scor
NoneNo IPR availableunknownCoilCoilcoord: 165..185
scor
NoneNo IPR availablePANTHERPTHR34451FAMILY NOT NAMEDcoord: 6..323
score: 8.9
NoneNo IPR availablePANTHERPTHR34451:SF2GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MTO12coord: 6..323
score: 8.9