CU115248 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU115248
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 20377765 .. 20378009 (+)
Sequence length260
The following sequences are available for this feature:

transcribed_cluster sequence

CACCACAGCCGTCTTTCCTATCAATAGACTTAGGTGAAATTCGAGGCTTTGAGTCGGAATCGAAAAATGAAAAATTGGGCTTGGCGCAGGGAGGGCAGAGATAAGAGGAGGAGGTAGTGGAGGACAGAAGCTGAGGGTCGGGGCAAGCCGGATTGACAACGCAATGAGAATGCGTAATAGAAGAACATTTAGAACAAGTGAAACGATTGGAGGGATGAGGAGACACAGAAAGATCATAGAACTGGGAAGCAAAGGAAGGG
BLAST of CU115248 vs. TrEMBL
Match: A0A0A0LYS3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G560710 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 8.7e-34
Identity = 68/77 (88.31%), Postives = 68/77 (88.31%), Query Frame = -2

Query: 14  QFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQXXXXXXXXXYLCPPCAKPNFSF 73
           QFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQ         YLCPPCAKPNFSF
Sbjct: 65  QFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKPNFSF 124

Query: 74  FDSDSKPRISPKSIDRK 133
           FDSDSKPRISPKSIDRK
Sbjct: 125 FDSDSKPRISPKSIDRK 141

Query: 134 193
           
Sbjct: 185 141

Query: 194 245
           
Sbjct: 245 141

BLAST of CU115248 vs. TrEMBL
Match: A0A067JHK0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23170 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.4e-07
Identity = 33/76 (43.42%), Postives = 43/76 (56.58%), Query Frame = -2

Query: 14  FYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQXXXXXXXXXYLCPPCAKPNFSFF 73
           FYD +  P PS R +CS CSS THSHC  + +              +LCPPCA PNFSFF
Sbjct: 69  FYD-TTPPPPSKRLSCSNCSSFTHSHCAPSQS----------PSFAFLCPPCADPNFSFF 128

Query: 74  DSDSKPRISPKSIDRK 133
             D   + + ++ID+K
Sbjct: 129 HLD---KTNNRTIDKK 130

Query: 134 193
           
Sbjct: 189 130

Query: 194 242
           
Sbjct: 249 130

BLAST of CU115248 vs. TrEMBL
Match: B9RFQ8_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_1436640 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.2e-06
Identity = 33/75 (44.00%), Postives = 45/75 (60.00%), Query Frame = -2

Query: 17  FYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQXXXXXXXXXYLCPPCAKPNFSFF 76
           FYD S  P PS R +CS C+S THSHC  + + P P          +LCPPCA  NF+FF
Sbjct: 61  FYDTSPPP-PSKRISCSNCTSFTHSHCATS-SPPFP----------FLCPPCADANFNFF 120

Query: 77  DSDSKPRISPKSIDR 136
           + ++   I+ K+ID+
Sbjct: 121 NFEN---INKKTIDK 120

Query: 137 196
           
Sbjct: 181 120

Query: 197 242
           
Sbjct: 241 120

BLAST of CU115248 vs. NCBI nr
Match: gi|778662161|ref|XP_011659447.1| (PREDICTED: uncharacterized protein LOC105436183 [Cucumis sativus])

HSP 1 Score: 147.9 bits (372), Expect = 8.1e-33
Identity = 68/77 (88.31%), Postives = 68/77 (88.31%), Query Frame = -2

Query: 14  QFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQXXXXXXXXXYLCPPCAKPNFSF 73
           QFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQ         YLCPPCAKPNFSF
Sbjct: 65  QFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTTSSSYLCPPCAKPNFSF 124

Query: 74  FDSDSKPRISPKSIDRK 133
           FDSDSKPRISPKSIDRK
Sbjct: 125 FDSDSKPRISPKSIDRK 141

Query: 134 193
           
Sbjct: 185 141

Query: 194 245
           
Sbjct: 245 141

BLAST of CU115248 vs. NCBI nr
Match: gi|659099270|ref|XP_008450515.1| (PREDICTED: uncharacterized protein LOC103492096 [Cucumis melo])

HSP 1 Score: 145.6 bits (366), Expect = 4.0e-32
Identity = 67/77 (87.01%), Postives = 67/77 (87.01%), Query Frame = -2

Query: 14  QFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQXXXXXXXXXYLCPPCAKPNFSF 73
           QFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQ         YLCPPCAKPNFSF
Sbjct: 65  QFYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQLLSSTSSSSYLCPPCAKPNFSF 124

Query: 74  FDSDSKPRISPKSIDRK 133
           FD DSKPRISPKSIDRK
Sbjct: 125 FDLDSKPRISPKSIDRK 141

Query: 134 193
           
Sbjct: 185 141

Query: 194 245
           
Sbjct: 245 141

BLAST of CU115248 vs. NCBI nr
Match: gi|1009116458|ref|XP_015874783.1| (PREDICTED: uncharacterized protein LOC107411671 [Ziziphus jujuba])

HSP 1 Score: 71.6 bits (174), Expect = 7.4e-10
Identity = 37/79 (46.84%), Postives = 46/79 (58.23%), Query Frame = -2

Query: 14  QFYDLSVSPHPSNRFTCSKCSSITHSHC--VVNPACPDPQXXXXXXXXXYLCPPCAKPNF 73
           Q YD + +P  S R TC+KCSS THSHC  +  P+              YLCPPCA PNF
Sbjct: 77  QCYDTTNTPVSSKRLTCAKCSSFTHSHCASLPPPSASSTTTNTTPSSSTYLCPPCATPNF 136

Query: 74  SFFDSDSKPRISPKSIDRK 133
           +FFD DS P    K+ID++
Sbjct: 137 TFFDLDSDPN---KAIDKR 152

Query: 134 193
           
Sbjct: 197 152

Query: 194 245
           
Sbjct: 257 152

BLAST of CU115248 vs. NCBI nr
Match: gi|802755152|ref|XP_012088829.1| (PREDICTED: uncharacterized protein LOC105647377 [Jatropha curcas])

HSP 1 Score: 61.6 bits (148), Expect = 7.7e-07
Identity = 33/76 (43.42%), Postives = 43/76 (56.58%), Query Frame = -2

Query: 14  FYDLSVSPHPSNRFTCSKCSSITHSHCVVNPACPDPQXXXXXXXXXYLCPPCAKPNFSFF 73
           FYD +  P PS R +CS CSS THSHC  + +              +LCPPCA PNFSFF
Sbjct: 69  FYD-TTPPPPSKRLSCSNCSSFTHSHCAPSQS----------PSFAFLCPPCADPNFSFF 128

Query: 74  DSDSKPRISPKSIDRK 133
             D   + + ++ID+K
Sbjct: 129 HLD---KTNNRTIDKK 130

Query: 134 193
           
Sbjct: 189 130

Query: 194 242
           
Sbjct: 249 130

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LYS3_CUCSA8.7e-3488.31Uncharacterized protein OS=Cucumis sativus GN=Csa_1G560710 PE=4 SV=1[more]
A0A067JHK0_JATCU1.4e-0743.42Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23170 PE=4 SV=1[more]
B9RFQ8_RICCO1.2e-0644.00DNA binding protein, putative OS=Ricinus communis GN=RCOM_1436640 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778662161|ref|XP_011659447.1|8.1e-3388.31PREDICTED: uncharacterized protein LOC105436183 [Cucumis sativus][more]
gi|659099270|ref|XP_008450515.1|4.0e-3287.01PREDICTED: uncharacterized protein LOC103492096 [Cucumis melo][more]
gi|1009116458|ref|XP_015874783.1|7.4e-1046.84PREDICTED: uncharacterized protein LOC107411671 [Ziziphus jujuba][more]
gi|802755152|ref|XP_012088829.1|7.7e-0743.42PREDICTED: uncharacterized protein LOC105647377 [Jatropha curcas][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G560710Csa1G560710gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02MT557FKNP3UI02MT557EST
FKNP3UI02OK1N3FKNP3UI02OK1N3EST
G0169874G0169874EST


Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 21..61
score: 1.